Vartika Vaishyaa,
Manish K. Mehra‡
b,
S. K. Pandeyc and
Meenakshi Pilania*a
aDepartment of Chemistry, School of Physical and Biological Sciences, Manipal University Jaipur, VPO- Dehmi-Kalan, Off Jaipur-Ajmer Express Way, Jaipur, Rajasthan 303007, India. E-mail: meenakshi.pilania@jaipur.manipal.edu; meenakshi.pilania1987@gmail.com
bDepartment of Chemistry, Gachon University, 1342 Seongnamdaero, Seongnam, Gyeonggi 13120, Republic of Korea
cDepartment of Chemistry, Maulana Azad National Institute of Technology Bhopal, Bhopal, Madhya Pradesh 462003, India
First published on 8th May 2025
An effective iodine-mediated one-pot three-component strategy for the construction of indolyl-1,3,4-thiadiazole amines has been described. The method involved the reaction of tosylhydrazine with indole-3-carboxaldehyde and ammonium thiocyanate as a non-toxic source of sulphur under metal-free conditions. The developed protocol included readily available substrates, shorter reaction time, use of low-toxic thiocyanate, and benzylation with a broad substrate scope, making it a viable approach for multiple applications. Furthermore, DFT analysis was conducted using the Gaussian 09 package.
It is noteworthy that these procedures typically involve multi-step synthetic approaches for the construction of indolyl-1,3,4-thiadiazole amines. As shown in Scheme 1d, the indolyl-1,3,4-thiadiazole amines have been synthesized by heating indole-3-carbonitriles with thiosemicarbazide under acidic (TFA) conditions.42 However, this approach (Scheme 1d) requires indole-3-carbonitriles as substrates, which are generally expensive or require an additional synthetic step for their preparation. Likewise, Perike et al. recently disclosed that when thiosemicarbazide reacts with indole-3-carboxaldehyde in tert-butyl hydroperoxide (TBHP), it affords indolyl-1,3,4-thiadiazole amine (Scheme 1e).43 Although the Perike group developed this one-step protocol (Scheme 1e), the preparation of indolyl-1,3,4-thiadiazole amine was limited to a single example. Despite numerous efforts presented thus far, the existing protocols to prepare indolyl-1,3,4-thiadiazole amines involve pre-functionalized starting materials, harsh or environmentally unfavourable reaction conditions, moisture-sensitive reagents, and expensive or lengthy syntheses.
Hence, developing operationally simple and mild reaction conditions is highly desirable. In the recent past, N-tosylhydrazones have gained considerable attention owing to their high stability and versatility for a range of synthetic transformations, including reductions, carbenoid chemistry, cross-coupling reactions under metal-catalysed44 or metal-free reaction conditions, as well as functionalization and the preparation of heterocycles.45–47 N-Tosylhydrazone, a particular carbene species, has been used to synthesize numerous biologically active motifs with a wide scope of applications,48 such as thiadiazole derivatives,49–52 tetrazole derivatives,53 pyrazole derivatives,54 and oxazine derivatives.55 Recently, the combination of I2 and DMSO has become a popular and environmentally benign oxidative system for organic synthesis.56–59 Owing to its easy availability and high reactivity, iodine is frequently used in the synthesis of 1,3,4 thiadiazole and 1,3,4-oxadiazoles.60–69 Yu and colleagues developed a synthetic protocol leading to 2-amino-1,3,4-thiadiazole and 2-amino-1,3,4-oxadiazole from the reaction of semicarbazide/thiosemicarbazide with aldehyde derivatives using iodine.62
Zhu and colleagues revealed an efficient method for synthesizing 2-amino-1,3,4-thiadiazole using N-tosylhydrazones, potassium thiocyanate (KSCN) and iodine.70 However, this aforementioned protocol was limited to benzaldehyde analogues.70,71 To overcome the limitations of existing methods, we aimed to develop a direct, efficient, eco-friendly, and cost-effective protocol to synthesize indolyl-1,3,4-thiadiazole amine.
Herein, we report a direct single-step synthesis of indolyl-1,3,4-thiadiazole amine from the reaction of readily accessible indole-3-carboxaldehyde and TsNHNH2 using ammonium thiocyanate (NH4SCN) as a sulphur source in the presence of I2 (iodine)/DMSO as an oxidative system (Scheme 1f).
Entry | 2 | Solvent | Additive | Time (h) | T (°C) | Yieldb (%) |
---|---|---|---|---|---|---|
a Reaction conditions: 1a (1.38 mmol), 2 (2.76 mmol, 2 equiv.), p-toluenesulfonyl hydrazide (1.38 mmol, 1 equiv.), iodine (2.07 mmol, 1.5 equiv.), and solvent (2.0 mL) in a sealed tube for 1 h at 100 °C.b Isolated yields.c 1.5 equiv. of NH4SCN was used.d ND = not determined. | ||||||
1 | KSCN | DMSO | — | 5 | 100 | 70 |
2 | KSCN | DMSO | K2S2O8 | 2.5 | 100 | 20 |
3 | KSCN | DMSO | Na2CO3 | 2.5 | 100 | 55 |
4 | KSCN | DMSO | K2CO3 | 2.5 | 100 | 32 |
5 | KSCN | DMSO | Cs2CO3 | 2.5 | 100 | 30 |
6 | KSCN | DMSO | CuI | 2.5 | 100 | NDd |
7 | KSCN | DMSO | CuCl2 | 2.5 | 100 | NDd |
8 | NH4SCN | DMSO | — | 1 | 100 | 88 |
9 | NH4SCN | DMSO | — | 1 | 100 | 72c |
10 | NH4SCN | EtOH | — | 18 | 78 | NDd |
11 | NH4SCN | DMF | — | 1 | 50 | 50 |
12 | NH4SCN | Toluene | — | 2.5 | 100 | Trace |
13 | KSCN | DCE | — | 2.5 | 100 | Trace |
Finally, we uncovered that the ideal conditions for the reaction of 1a to produce an acceptable yield of 3a in 1 h were the use of iodine (1.5 equiv.), p-toluenesulfonyl hydrazide (1 equiv.), and NH4SCN (2 equiv.) in DMSO at 100 °C.
The reaction of 1 with electron-rich (methoxy), halo (bromo, chloro and fluoro), and electron-deficient (nitro) substitutions was used to investigate the generality of the optimized methodology (Scheme 2). Reaction with electron-neutral (1a), electron-rich (OMe; 1b), halogen (Br, Cl; 1c, 1d) bearing at the C5-position and halogen (F; 1e) at the C4-position of indole-3-carboxaldehydes produced the corresponding 5-(1H-indol-3-yl)-1,3,4-thiadiazol-2-amines (3a–e) in excellent yields (80–91%). Nonetheless, indole-3-carboxaldehyde 1f, having an electron-deficient nitro group, exhibited diminished reactivity, resulting in the formation of 3f with a slightly reduced yield of 65% (Scheme 2).
To demonstrate the synthetic usefulness of this developed protocol, we targeted the gram-scale synthesis of 5-(1H-indol-3-yl)-1,3,4-thiadiazol-2-amine 3a (Scheme 2). Fortunately, under standard conditions, the reaction of 1.0 g 1a (6.89 mmol) under optimized conditions gave 1.28 g of desired product 3a in an 86% yield.
Next, we focused on exploring the utilization of 3-acetylindole instead of 3-formylindole (1a). Unfortunately, when we utilized 3-acetylindole under the developed conditions, the desired product was not detected. Therefore, we slightly modified our strategy. First, we prepared the corresponding N-tosylhydrazone of 3-acetylindole (1g), as described in the literature.72 Further, the investigation concluded that the use of ethanol as a solvent and the addition of 1 equiv. of K2S2O8 are required to obtain the expected 2-(1H-indol-3-yl)-1,2,3-thiadiazole (3g) in 82% yield (Scheme 3).
We further focused on the exploration of the N-alkylation of 5-(1H-indol-3-yl)-1,3,4-thiadiazol-2-amine 3a owing to the significance of 2-N-(alkylamino)thiadiazoles, the distinct reaction properties of tosylhydrazones, and the emergence of difficult C–N bond formation approaches. In this regard, the reaction was optimized meticulously by changing various factors, and the results are presented in Table 2.
Entry | Base | Solvent | T (°C) | Time (h) | Yield (%) |
---|---|---|---|---|---|
a Reaction conditions: 3a (0.46 mmol, 1 equiv.), 4a (0.46 mmol, 1 equiv.), CuI (0.046 mmol, 0.1 equiv.), LiOtBu (0.69 mmol, 1.5 equiv.), and toluene (1.5 mL) in a sealed tube for 2.5 h at 110 °C.b Isolated yields.c ND = not determined. | |||||
1 | Na2CO3 | Toluene | 100 | 2 | Trace |
2 | Cs2CO3 | Toluene | 100 | 3 | 30 |
3 | Li-t-OBu | Toluene | 100 | 3 | 70 |
4 | Li-t-OBu | Toluene | 110 | 2.5 | 80 |
5 | Li-t-OBu | Toluene | 120 | 2.5 | 78 |
6 | Li-t-OBu | Xylene | 110 | 2.5 | 75 |
7 | Li-t-OBu | DMSO | 110 | 3 | NDc |
The first attempt involved a reaction between 3a and 4a in toluene at 100 °C for 2 h using 10 mol% CuI and Na2CO3 as a base. Unfortunately, only trace amounts of the desired product (5a) were observed (Table 2, entry 1). Next, the changing base from Na2CO3 to Cs2CO3 and LiOtBu resulted in the formation of 5a in 30% and 70%, respectively (Table 2, entry 2–3). Notably, a higher product yield (5a, 80%) was observed when the reaction temperature was increased from 100 °C to 110 °C (Table 2, entry 4). However, when the temperature of the reaction mixture was further increased to 120 °C, the yield of 5a was reduced to 78% (Table 2, entry 5). The use of another non-polar solvent, xylene, resulted in a relatively lower product yield (75%) of 5a (Table 2, entry 6). It was observed that when DMSO, a polar solvent, was used for the reaction, the expected product 5a was not detected, indicating the toxic behaviour of polar solvents on the reaction outcome (Table 2, entry 7). Thus, 10 mol% of CuI with 1.5 equiv. of LiOtBu in toluene at 110 °C was the optimal condition for the benzylation of 3a using 4a.
Upon establishing suitable reaction conditions (Table 2, entry 4), we assessed the generality of the N-benzylation reaction by utilizing a series of tosylhydrazones 4a–l. As shown in Scheme 4, tosylhydrazone with electron neutral (4a) and halogen (Br; 4b and F; 4c) substituents on the aromatic ring produced products in good yields (5a–c). Tosylhydrazones with electron-donating substituents, such as -NMe2 (4d), -OMe (4e and 4f), and -OBn (4g), either at meta- or para-positions, slightly affected the product yield, giving corresponding 5d–g in 38–62% yields. It is important to mention that the tosylhydrazone bearing a base-sensitive hydroxy group (4h) could deliver desired product 5h in 30% yield. Remarkably, tosylhydrazone with electron-withdrawing substituents, such as nitro (4i) and cyano (4j), reacted efficiently to provide the expected products 5i (80%) and 5j (78%) in high yields. Notably, heterocyclic thiophene (4k) and benzophenone (4l) derived N-tosylhydrazone were also reacted. However, their products (5k and 5l) were obtained in low yields (28–29%) (Scheme 4).
Scheme 5 shows a plausible mechanism for synthesizing indolyl-1,3,4-thiadiazole amine 3a based on experimental observations and previous studies.70 First, it is believed that 1a reacts with p-toluenesulfonyl hydrazide to form N-tosylhydrazones A (Scheme 5). Tosylhydrazone A then probably gives iodonium ion B in the presence of molecular iodine (I2). Subsequently, the attack of –the SCN ion results in the formation of intermediate C. This formed intermediate C is then converted to D by eliminating a hydrogen iodide (HI) molecule. Next, the intramolecular cyclization of D may provide intermediate E. Finally, intermediate E generates desired product 3a by losing a molecule of p-methylbenzenesulfonic acid (TsOH) and capturing a proton via a hydrogen shift (Scheme 5).
Similarly, a plausible mechanism for the I2/K2S2O8-mediated reaction of N-tosylhydrazones 1g and ammonium thiocyanate, leading to the synthesis of Indolyl-1,2,3-thiadiazole, is proposed in Scheme 6.73 Initially, compound 1g reacts with I2 to form α-iodo substituted species I, generating I−, which is reoxidized to I2 by K2S2O8. Intermediate I is then transformed into intermediate II by eliminating HI. Intermediate II reacts with NH4SCN to produce intermediate III, which, upon tautomerization, produces intermediate IV. Intramolecular cyclization of IV was followed by the elimination of a cyanide ion in the presence of a base, yielding intermediate V. Finally, intermediate V releases TsH, resulting in the formation of the indolyl-1,2,3-thiadiazole product (3g). Notably, this reaction produced toxic CN− ions and H+ ions, which can release HCN gas as a byproduct (Scheme 6).
Molecular orbitals, such as the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO), are obtained from frontier molecular orbitals (FMOs). The qualitative estimation of the HOMO–LUMO gap (HELG, denoted as Egap) has important chemical implications. For any molecular system, such orbitals drop at the remotest edges of electrons, where the HOMO behaves like a Lewis base and consists of occupied (filled) orbitals with electrons exhibiting the highest occupied molecular orbital energy level, allowing them to easily donate electrons. However, another orbital named LUMO (i.e. immediate upper energy level of the HOMO) plays a role as a Lewis acid and has an unoccupied (vacant) orbital showing the lowest unoccupied molecular orbital energy level, which can easily accept the electrons from the HOMO. A crucial metric is that electron mobility can be determined from the HOMO to the LUMO. In general, a large HLEG value signifies a chemical species with good thermodynamic stability (chemically less reactive), while a small HLEG value indicates an easier electronic transition along with a chemically more reactive compound. The energetic contribution, especially the HLEG value (Egap), is very important for the stability of any species. The energies of the HOMO (EHOMO) and LUMO (ELUMO) and their energy difference (Egap) are shown in Fig. 2. Usually, a higher electronegativity of an atom or a group of atoms increases the acidic nature and the expected trend among the –OCH3, -Br, and –NO2 functional groups chosen in this study. The electronegativity order is –NO2 > –OCH3 (where Me → CH3) > -Br, which appears to show a similar pattern for the acidity. However, considering the I-effect of the substituents reported by Robert Taft in 1958, the electron acceptors (-I effects) received positive sigma values (Taft's constants) with the following order: –NO2 (0.65) > Br (0.44) > -OMe (0.27).78 Sayiner et al.79 demonstrate that a smaller Egap is generally associated with enhanced antibacterial activity, as it increases the potential for the compounds to interact with bacterial cells and their membranes, ultimately leading to cell death. Essentially, a reduced Egap facilitates easier electron transfer and promotes the generation of harmful radicals. Generally, the trend typically correlates with biological reactivity.80 Its effect may also depend on the specific biological target involved. The quantum descriptors, including the HOMO–LUMO energy gap (ΔE = ELUMO − EHOMO), absolute electronegativity (χ = −(EHOMO + ELUMO)/2), absolute hardness (η = (ELUMO − EHOMO)/2), absolute softness (σ = 1/η), chemical potential (Pi = − χ), and global electrophilicity (ω = Pi2/2η)79 were calculated, as summarized in Table 3. Dehghanian et al.81 in 2021 reported that a high ω value indicates that a compound is more likely to interact with biological macromolecules, such as proteins and DNA. These results (see Table 3) indicate that the ΔE value for 5i has the lowest value among the three selected systems, suggesting that 5i possesses higher chemical reactivity (i.e. biologically the most reactive) than the others. In this work, the order of the Egap values for all these three functional group-related compounds is OMe@5e (4.333) > Br@5b (4.306 eV) > NO2@5i (2.902 eV), which shows that the OMe@5e compound is the most stable (chemically least reactive) among all three indolyl-1,3,4-thiadiazol amine-substituted compounds. As described in Table 3, a lower Egap and higher global electrophilicity (ω) value for 5i indicates its superior reactivity towards the interactions with protein receptors.82,83 The calculated global electrophilicity (ω) of the investigated compounds showed that compounds 5b and 5e featured lower values, indicating comparatively reduced reactivity of the two systems. Overall, the global electrophilicity (ω) values follow the trend 5i > 5b > 5e.
Entry | Descriptors | 5b | 5e | 5i |
---|---|---|---|---|
1 | HOMO (eV) | −5.203 | −5.084 | −5.354 |
2 | LUMO (eV) | −0.897 | −0.751 | −2.452 |
3 | Egap (eV) | 4.306 | 4.333 | 2.902 |
4 | Electronegativity (χ) | 3.05 | 2.917 | 3.903 |
5 | Absolute hardness (η) | 2.153 | 2.166 | 1.451 |
6 | Chemical potential (Pi) | −3.05 | −2.917 | −3.903 |
7 | Absolute softness (σ) | 0.464 | 0.461 | 0.68 |
8 | Global electrophilicity (ω) | 2.16 | 1.963 | 5.249 |
The LUMO value of the –NO2-related compound shows the most negative value (−2.452 eV) (highest in magnitude), which indicates its most acidic behavior (electron needy). However, the LUMO value of the -OMe group is found to be the lowest negative value (−0.751 eV, lowest in magnitude). Moreover, the HOMOs for both compounds related to -Me and –NO2 give an opposite trend, as expected. The Egap (2.902 eV) of the NO2@5i compound is the lowest among all the three systems, showing that the NO2@5i system is expected to absorb light with higher wavelengths than the other two compounds with significantly larger Egap values [OMe@5e (4.333) > Br@5b (4.306 eV)]. The three-dimensional (3D) isosurface maps of the FMOs, such as the HOMOs and LUMOs of all the three selected compounds, are shown in Fig. 2. The HOMOs of all three compounds appeared to be distributed over (in-phase) 5–6 membered fused rings and the next associated 5-membered ring. However, the LUMOs for the OMe@5e and Br@5b compounds were found to be spread over slightly different (out-phase) on the same rings. Moreover, the LUMOs of the NO2@5i are observed in the NO2-associated ring. Considering the HOMOs and LUMOs of all three compounds, the electronic transition appears to show from π to π* transitions.
The electrostatic potential over constant electron density of any chemical species has frequently been acquired by employing the molecular electrostatic potential (MESP) surfaces. The MESP is important owing to its simultaneous display of the local positive and negative potential regions and the sizes and shapes of any chemical species referred to by the color scheme. This is beneficial for exploring the most probable reactive sites (electrophilic and nucleophilic attacks) in relation to the sizes and shapes of molecular systems. The blue (positive), green (neutral), and red (negative) colour regions describe nucleophilic, neutral, and electrophilic attack locations, respectively (see Fig. 2, top). It is observed that the H atom of the N–H group of the bridged C between the two terminal ring segments shows a strong electrophilic nature (electron deficient and electron lover) (shown in dark blue colour, representing the positive region where it can strongly attack the nucleophilic centre). However, the N–H group of the 5-membered ring of the fused ring describes an electrophilic nature but is slightly weaker than the above-mentioned N–H group. Interestingly and importantly, the OMe, NO2, and Br groups exhibit a nucleophilic nature (electron rich as the nucleus or proton lover) because of the presence of negative charges (shown in red colour, indicating a negative region where an electrophile or proton lover can attack an electrophilic centre) on the O- and Br-atoms.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d5ra02026c |
‡ The Wistar Institute, Philadelphia, PA, 19104, USA. |
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