Open Access Article
Andrew. T.
Turley
*a,
Magnus W. D.
Hanson-Heine
b,
Stephen. P.
Argent
b,
Yaoyang
Hu
a,
Thomas. A.
Jones
a,
Michael
Fay
c and
Simon
Woodward
*a
aGSK Carbon Neutral Laboratories for Sustainable Chemistry, University of Nottingham, Jubilee Campus, Nottingham NG7 2TU, UK. E-mail: andrew.turley@nottingham.ac.uk; simon.woodward@nottingham.ac.uk
bSchool of Chemistry, University of Nottingham, University Park Campus, Nottingham NG7 2RD, UK
cNanoscale and Microscale Research Centre, University of Nottingham, University Park Campus, Cripps South Building, Nottingham, NG7 2RD, UK
First published on 16th November 2022
Previously inaccessible large S8-corona[n]arene macrocycles (n = 8–12) with alternating aryl and 1,4-C6F4 subunits are easily prepared on up to gram scales, without the need for chromatography (up to 45% yield, 10 different examples) through new high acceleration SNAr substitution protocols (catalytic NR4F in pyridine, R = H, Me, Bu). Macrocycle size and functionality are tunable by precursor and catalyst selection. Equivalent simple NR4F catalysis allows facile late-stage SNAr difunctionalisation of the ring C6F4 units with thiols (8 derivatives, typically 95+% yields) providing two-step access to highly functionalised fluoromacrocycle libraries. Macrocycle host binding supports fluoroaryl catalytic activation through contact ion pair binding of NR4F and solvent inclusion. In the solid-state, solvent inclusion also intimately controls macrocycle conformation and fluorine–fluorine interactions leading to spontaneous self-assembly into infinite columns with honeycomb-like lattices.
Herein, we report one-pot catalytic protocols using C6F6 (and analogues) to form the robust, fluorinated macrocycle S8-corona[8]arene 1a (R = H) and its derivatives (Fig. 1b), whereby the C–F bonds are rapidly displaced in new templated catalytic macrocyclisation approaches and late-stage functionalisations. Highly catalyst accelerated SNAr substitutions of perfluoroaryl units enable these new mechanism driven protocols.‡
The aryl macrocycles (1) are prepared from low cost materials on up to gram scales in 1–3 steps without any special conditions. Purification is achieved without the need for chromatographic separations or recrystallisation. Instead, all the macrocycles reported here are isolated simply by filtering off any insoluble by-products formed. To the best of our knowledge, this is the first report of readily accessible corona[n]arenes with n > 6,19 and the first to realise one-step aryl functionalisation. The reactions are general and libraries of S8-corona[n]arene (1) derivatives with varying symmetries and substitution patterns are readily attained. Catalytic functionalisation of the derived S8-corona[n]arenes (1) themselves with thiols is also rapid at room temperature, allowing further highly diverse functional fluorinated macrocycles to be attained in just two steps. Additionally, the solvent and ammonium guest binding behaviour of 1 is in accord with the new NR4F/pyridine C–F activation protocol proposed and demonstrates the wide potential of S8-corona[n]arenes (1) in host-guest applications.
C character). This is the likely origin of the remarkable SNAr acceleration observed (ESI Fig. S213–S215† and data for kinetic simulation of 1a formation). This is in addition to the macrocyclisation effects of the same NR4F template-catalysts. The use of pyridine is important as this solvent particularly favours the formation of the necessary NR4F contact ion pairs.27
Optimisation provided a one-pot preparation of macrocycle 1a in moderate, but practical and scalable yields, through the 10 min addition of C6F6 to a vigorously stirred 0.05 M solution of 2a,§ in pyridine containing 5 mol% TMAF at room temperature (Scheme 1a). All starting materials and active intermediates are fully consumed, providing S8-corona[8]arene (1a) and minor amounts of the larger S12-corona[12]arene 1a′ (1a
:
1a′ = 88
:
12) along with some acyclic/cyclic oligomers and insoluble polymer P1. Purification of this mixture is straightforward: P1 is simply removed by filtration once the reaction is completed, leaving only the macrocycles and trace non-macrocyclic materials in the solution. Trituration of the soluble fraction with pentanes removes all non-macrocyclic material, affording a colourless crystalline solid of 1a and 1a′ in a 27–31% yield. Both 1a and 1a′ show singlets in their 1H (Fig. 2) and 19F NMR spectra with similar chemical shifts.
MALDI-TOF mass spectrometry confirmed the identity of both macrocycles showing the expected mass and S8/S12 isotope patterns (ESI Fig. S134–S138†). Only negligible change in the relative ratios of 1a and 1a′ is observed in the one-pot reaction as a function of catalyst (compared to the fragment 3a approach below). Diffusion-Ordered NMR Spectroscopy (DOSY) was employed to distinguish the peaks correlating to 1a and 1a′, confirming the major product as 1a (Fig. 2b). Analytically pure 1a can be obtained through sublimation (0.9 mbar, 300–350 °C) of the 1a and 1a′ mixture.
:
1a′ ratio 1
:
0.00), as the size of the catalytic template increases the amount of 1a′ also increases (up to a 1a
:
1a′ ratio of 1
:
0.15 for TBAF). However, in each instance, the macrocycle yields remain comparable and DOSY NMR confirms only 1a and 1a′ form (Fig. 2b).
:
[12] ratio of 1
:
0.13 for 1ab and 1
:
0.33 for 1bc respectively, with the smaller, S8-corona[8]arene being the major product for both (ESI Fig. S41, S81, and S132–S133†). DOSY/2D NMR spectroscopy (ESI Fig. S39–S133†) and MALDI-TOF mass spectrometry (ESI Fig. S134–S175†) confirm the preparation of all ten new S8-corona[n]arenes. In particular, each macrocycle shows a clear S8 isotope pattern at the expected mass, while the dissymmetric mixed aryl systems 1ab–cd show two 19F NMR environments as ‘AB’ systems or overlapping multiplets at ca. −133.0 ppm.
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| Fig. 3 Library synthesis of mixed S8-corona[n]arenes (1). Footnotes: a mixture of both S8 (n = 2, major) and S12 (n = 3, minor) 1 formed; bTBAF used as catalyst instead of TMAF. | ||
When crystallised from CHCl3, 1a forms a solid-state 1
:
2 host–guest inclusion complex, 1a⊂2CHCl3 (Fig. 4b). The macrocycle within this 1a–CHCl3 solvate adopts a ‘staircase-like’ conformation where the individual aryl units now point face-inwards to maximise electrostatic interactions between 1a and the guest. To efficiently accommodate both guests, the macrocycle lengthens to 1.57 nm, with an 8.40 Å reduction in width, and an increase in the average C–S–C bond angle to 103.51°, forming two equal and symmetrical binding sites on opposite sides of the macrocycle, to minimise unfavourable interactions between guests. This same conformational shift, in response to guest binding, is also observed in related 1a–THF, where a similar staircase-like conformation arises in response to a 1
:
2 host–solvent complex. While disorder prevents exact THF detection, the staircase conformation explicitly points to it. After 1
:
2 guest binding, the columnar supramolecular packing of 1a remains, generating infinite rigid column arrays (dictated by intermolecular hydrogen bonding between adjacent C6H4 and C6F4 units) saturated with guest/solvent molecules, a feature that is highly sought after for many applications, for example, gas exchange materials.29
When single crystals of 1a are grown through slow evaporation of DMF solutions, the macrocycle adopts a ‘tub-like’ conformation reminiscent of cyclooctatetraene (1a–DMF, Fig. 4c). Unlike with 1a–CHCl3, here the DMF solvent remains disordered amongst sheets of 1a in the solid state. The asymmetric unit reveals a pair of 1a macrocycles stacked on top of each other, with each C6H4 stacking on to a proximal C6F4 unit (and vice versa) to maximise intermolecular hydrogen bonding between adjacent macrocycles. As in the other structures, these weak hydrogen bonds facilitate the formation of well-defined columns, which are characteristic of all the solvates of 1a identified to date. Substitution of R = H (1a) to other macrocycles changes this behaviour. For example, in the X-ray structure of 1b (R = Me, ESI Fig. S209†) staggered channels form with overlap between adjacent columns, forming infinite chain-linked columns, permitting multiple intermolecular CF–π interactions to form (ESI Fig. S210†).
As a proof-of-concept, our TMAF/pyridine SNAr catalysis protocol was used to synthesise a range of thiol substituted S8-corona[n]arenes under mild conditions in high yields (Scheme 2). In each case, these substitutions converge into a single isomerically pure product, overcoming the need for laborious separations of positional isomers. The large aryl thiol units along with the steric restraints of the macrocycle framework prevent complete substitution of all 16 aryl-fluoride groups within 1a. Instead, only selective 2,5-functionalisation occurs on every C6F4 unit for a total of 8 substitutions. Initial testing was conducted on NMR scales with a small excesses of thiophenol (10–16 equiv.) being added to a sample of 1a in pyridine containing TMAF with no precautions taken to remove oxygen or moisture: 19F NMR analysis shows the singlet at −134 ppm for 1a is quickly disrupted into many peaks spanning −90 to −134 ppm which are attributed to the positional isomers caused by partial substitutions. Over the course of 2 hours, these peaks all converge into a new singlet at ca. −90 ppm, representing the targeted 2,5-functionalised macrocycle 4a (ESI Fig. S129† for NMR monitoring). Macrocycles 1b and 1d, show equal success in equivalent functionalisation with thiophenol. In all cases, purification is straightforward with simple trituration with water, MeOH, and then Et2O (to remove pyridine HF-pyridine, TMAF, unreacted excess nucleophile, and any disulfide) being sufficient to isolate 4 as pure colourless solids. The [8SPh]S8-corona[n]arenes (4a, 4b, and 4d) are equivalently attained in excellent yields, selectively, in a single step from 1a, 1b, and 1d respectively (Scheme 2a). To confirm equivalent reactivity at scale, 4a was synthesised under the same conditions on a ca. 0.1 g scale and successfully isolated in 98% yield. Numerous thiophenol derivatives also readily participate of which 5a–5e provide a representative series. In all cases the catalysed SNAr reactions converge into a single octafunctionalised derivative in fair to excellent yields without the need for large excesses of thiol.
![]() | ||
| Scheme 2 (a) Synthesis of thiophenol functionalised S8-corona[n]arenes (4a, 4b, 4d). (b) Scope of 8-fold functionalisation of 1a to 5a–e; (c) 16-fold functionalisation of 1a to 6a. | ||
Attempted complete C–F displacement of 1a using large excesses of PhSH and heating results in significant thiol–thioether exchange causing the macrocyclic framework to break down into an uncharacterisable mixture. However, per-substitution of 1a could be achieved using smaller, non-aryl nucleophiles such as sodium ethanethiolate, providing 6a under mild conditions (Scheme 2c). Restricted rotation barriers result in broad 1H NMR signals (ESI Fig. S124†) and prevent 13C NMR characterisation. However, the absence of 19F NMR signals and a clear MALDI-TOF molecular ion confirm per-substituted (ESI Fig. S191–S192†). With their ease of substitution and convenient 19F NMR handle for reaction monitoring, S8-corona[n]arene backbones 1 are, we propose, highly attractive versatile building blocks for wide fields of application, e.g. ‘designer’ guests, molecular machine components, organic frameworks, etc.
:
1 binding, provided no cooperative guest binding effects occur.30 When 10 μM solutions of 1a in THF are titrated with CHCl3, DMF, and pyridine these provide reproducible good fits to 1
:
1 binding isotherms, based on simulation of the absorbance maxima at 295 nm (Table 1). Binding of larger NBu4Cl follows the same 1
:
1 behaviour, as does NBu4F, provided low relative concentrations (1a
:
NBu4F < 1
:
5) of the latter guest are used. At higher relative concentrations of NBu4F
:
1a a second association process is triggered and a new charge transfer band (εHG = 5.9(9) × 104 M−1 cm−1) at 370 nm, associated with a clear isosbestic point at ca. 315 nm, appears. These indicate the presence of a second species whose formation is induced by the initial NBu4F binding. A second 1
:
1 binding constant of K = 1.0(3) × 103 M−1 (R2 0.97) can be determined from absorbance data at 370 nm indicating this second process has ΔG° −4.0 kcal mol−1. This value is rather close to the gas-phase association energy we determine (DFT) for the interaction of NMe4F with C6F6 (−12 kcal mol−1, ESI Fig. S216†). We therefore propose that the charge transfer band at 370 nm is direct experimental evidence for the NR4F⋯fluoroaryl interaction we calculate (ESI Fig. S216†), and that this is at the heart of the high SNAr rate accelerations we see in the formation of 1a and in its subsequent derivatisations.
:
1 Guest binding to macrocycle 1aa
| Guest | K (M−1) | ε HG (M−1 cm−1) | ΔG° (kcal mol−1) | (R2) |
|---|---|---|---|---|
| a Determined by UV-vis titration in THF containing 190 ± 20 ppm water; the average of two reproducible duplicates is presented. The number in parentheses indicates the standard deviation in the preceding figure. b K = 3.3(6) M−1 (R2 098) in THF containing 300 ppm water. | ||||
| CHCl3 | 3.6(7) | 5.85(10) × 104 | −0.8 | 0.99 |
| DMF | 7.4(8)b | 5.56(4) × 104 | −1.2 | 0.99 |
| Pyridine | 8(1) × 103 | 5.7(3) × 104 | −5.2 | 0.97 |
| NBu4Cl | 2.6(3) × 104 | 6.14(4) × 104 | −5.9 | 0.98 |
| NBu4F | 1.5(2) × 104 | 7.15(10) × 104 | −5.6 | 0.99 |
Control studies indicate that the absorbance of 1a in THF is only weakly affected by the presence of water (δAbs 0.001–0.003), when the water levels in the THF are 150–250 ppm. All our studies were conducted at 190 ± 20 ppm water in THF as measured by Karl–Fisher titration. Water concentrations, above 300 ppm negatively affect the initial 1
:
1 guest binding (c.f. the DMF guest entry data within Table 1). This is most acutely apparent in attempted determinations of NMe4F binding to 1a. Hydrated NMe4F is insoluble in THF and only readily soluble in DMF containing significant water (ca. 2000 ppm). This water reduces NMe4F binding to 1a to a point where reproducible accurate K values cannot be determined. However, it is still clear from the qualitative UV spectra that the same two-step process is occurring, as the same 370 nm charge transfer band still emerges at higher 1a
:
NMe4F ratios. It is likely, based on our X-ray data, that initial guest binding to macrocycle 1a is driven by H-bonding and π–π interaction, while the second association of additional NR4F involves interaction of a C6F4 unit within 1a with a NR4F contact ion pair (DFT calculated, ESI Fig. S216†). To test this hypothesis, NMe4F binding to 1a was attempted in dry THF/CH2Cl2/MeOH mixtures. The presence of MeOH is known to deliver the solvent separated ion pair NMe4+ F−.27 Consistent with our proposal, no binding of any type of 1a to NMe4F is observed in this solvent mixture.
To help identify the solution state conformation of 1a a DFT conformational search was also made (ESI Fig. S217†). In the absence of guests, the lowest energy conformers are associated with transannular π–π contacts of the two central phenylene rings (either C6F4⋯C6F4, or C6H4⋯C6H4, see ESI Fig. S217†). These structures are significantly lower in energy than the open conformation of unsolvated 1a (as modelled from the X-ray structure of 1a-hexane). In adopting such π–π stacked conformers the macrocycle 1a twists generating two independent ‘bays’, each suitable for independent binding of a single guest. This arrangement is rather similar to that observed in the X-ray crystal structure of 1a–CHCl3, minus its guests. The S0 → Sn absorption spectra of the two calculated lowest energy conformers (in the absence of any guest) using adiabatic linear-response time-dependent density functional theory (TDDFT) with the M06-2X/6-311++G(d,p) functional and electronic basis set combination are in accord with the experimental solution spectra (250–300 nm). Conversely, the charge transfer band (370 nm) observed with NR4F (R = Me, Bu) is most consistent with a NR4FC6Fn (n = 4–6) contact lowering the C
C bond order of the fluoroaryl unit.
Footnotes |
| † Electronic supplementary information (ESI) available: Full experimental and characterisation data. Primary kinetic and guest binding data (Excel format). CCDC 2175101–2175106. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d2sc05348a |
| ‡ Catalysed SNAr substitutions using simple acyclic models of the sub-units within 1 also complete within minutes (compared to hours for the control uncatalysed reactions). Thus, the rate acceleration observed for NR4F/pyridine is in addition to any global ring templating effects (ESI Fig. S215†). |
| § Commercial 2a–d are also easily obtained at a low cost from the 2–3 step chromatography-free procedures outlined in the ESI.† The same is true for fragments 3a–d. |
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