Open Access Article
Hiroto
Takeda
,
Tatsuhiro
Kojima
,
Nobuto
Yoshinari
and
Takumi
Konno
*
Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan. E-mail: konno@chem.sci.osaka-u.ac.jp
First published on 16th July 2021
Here, we report a unique mesoporous ionic solid (I) generated from a cationic AuI6AgI3CuII3 dodecanuclear complex with D-penicillamine depending on the homochirality and crystallization conditions. I crystallizes in the cubic space group of F4132 with an extremely large cell volume of 2
171
340 Å3, containing 272 AuI6AgI3CuII3 complex cations in the unit cell. In I, the complex cations are connected to each other through CH⋯π interactions in a zeotype framework, the topology of which is the same as that of the metal–organic framework in MIL-101, with similar but much larger two types of polyhedral pores with internal diameters of 38.2 Å and 49.7 Å, which are occupied by counter-anions and water molecules. Due to the cationic nature of the framework, I undergoes quick, specific exchanges of counter-anions while retaining its single crystallinity. This study realized the creation of a non-covalent mesoporous framework from a single complex salt, providing a conceptual advance in solid chemistry and material science.
In 2002, Eddaoudi et al. reported the first crystalline material with three-dimensional (3D) mesopores with a diameter of 2.9 nm, named IRMOF-16, which is a metal–organic framework (MOF) sustained by coordination bonds between ZnII4 nodes and dicarboxylate linkers.19 Since then, a number of mesoporous crystalline materials with MOF structures have been synthesized based on the hierarchical self-assembly of molecular nodes and linkers using a synthetic strategy similar to that applied for IRMOF-16.20–25 One of the well-known examples of this class of materials is MIL-101, whose zeotype framework is composed of CrIII3 nodes and dicarboxylate linkers to form two kinds of cage-type mesopores with diameters of 2.9 nm and 3.4 nm.26 More recently, a unique crystalline MOF with larger mesopores with diameters of 5.0 nm and 6.2 nm, named NU-1301, has also been synthesized via the combination of UO22+ nodes and tricarboxylate linkers.27 Thus, rigid, directional coordination bonds between metal centres and carboxylate ligands have been critical for the creation of mesoporous crystalline compounds, although mesoporous frameworks sustained by covalent bonds and hydrogen bonds have been observed in organic solid materials.28–35
Here, we report the first mesoporous framework sustained by non-covalent CH⋯π interactions in a non-MOF coordination system, the structure of which was established by single-crystal X-ray crystallography. This system consists of a newly prepared AuI6AgI3CuII3 dodecanuclear complex salt, [Au6Ag3Cu3(tdme)2(D-pen)6](TFA)3 (tdme = 1,1,1-tris(diphenylphosphinomethyl)ethane, D-H2pen = D-penicillamine, TFA = trifluoroacetate), which crystallizes in a 3D ionic solid (I) with a very large unit cell containing a total of 272 AuI6AgI3CuII3 complex cations. Notably, the framework of I has the same topology as that of MIL-101, forming two kinds of cage-type mesopores that are larger than those in MIL-101, although the framework is composed of only complex cations linked by intermolecular CH⋯π interactions rather than coordination bonds, with its voids being occupied by counter-anions and water molecules. I is a kinetic product crystallized from aqueous media under ambient conditions and is reproducible and interconvertible with the thermodynamic non-porous solid product (I′) just by changing the crystallization temperature (Fig. 1). Very fast and specific anion exchanges for I, along with the creation of an analogous ionic solid (II) with smaller mesopores by introducing DL-pen instead of D-pen, are also reported.
Further treatment of the colourless solution obtained from D-H3LAu3 and silver(I) trifluoroacetate with 1.5 equiv. of aqueous copper(II) acetate at 0 °C yielded a blue solution, from which X-ray-quality blue crystals with a hexagonal plate shape (I′) were obtained by slow evaporation at 0 °C. Based on the IR spectrum (Fig. S3†) and the X-ray fluorescence and elemental analyses, I′ was assigned as an AuI6AgI3CuII3 dodecanuclear complex with the chemical formula [Ag3Cu3(D-LAu3)2](TFA)3·nH2O. The diffuse reflection spectrum of I′ exhibits a broad d–d band at 630 nm due to CuII centers39 and a positive band is observed in the solid-state CD spectrum in this region (Fig. S4†), indicative of the optically active nature of I′.
The structure of I′ was established by single-crystal X-ray crystallography, which revealed the presence of complex cations ([1D]3+ = [Ag3Cu3(D-LAu3)2(H2O)3]3+) and TFA− anions in a 1
:
3 ratio. As shown in Fig. 2a and b, the complex cation [1D]3+ contains two (D-LAu3)3− metalloligands that are spanned by 3 AgI atoms through thiolato groups and by 3 CuII atoms through amine and carboxylate groups, forming the cage-type AuI6AgI3CuII3 dodecanuclear structure in [AgI3CuII3(D-LAu3)2(H2O)3]3+. The overall structure in [1D]3+ is similar to that in the previously reported [MII3(D-LAu3)2] (M = Co, Cu, Cd), in which each MII centre is octahedrally coordinated by two N,O,S-chelates of D-pen from two (D-LAu3)3− metalloligands.36,37 However, each AgI centre in [1D]3+ adopts an S2 linear geometry coordinated by two thiolato donors, while each CuII centre has a trans-N2O3 square-pyramidal geometry coordinated by two N,O-chelates and a water molecule. In [1D]3+, an S-bridged AuI6AgI3 core is surrounded by 3 hydrophilic CuII centres with amine, carboxylate and aqua donors in the equatorial positions, while its apical positions are covered by 12 hydrophobic phenyl groups. Each [1D]3+ cation is surrounded by 9 TFA− anions so as to construct a 2D layer structure in I′, which is sustained by NH⋯O hydrogen bonds, together with coulombic interactions (Fig. 2c and d). The 2D layers are stacked in an ABAB fashion to form CH⋯π interactions between tdme phenyl groups (Fig. 2e).
Single-crystal X-ray analysis revealed that I crystallized in the cubic space group F4132, which is different from the trigonal space group P321 for I′. Remarkably, I possesses an exceptionally large crystal lattice with a cell volume of 2
171
340 Å3, which is the largest among non-MOFs and the third largest including MOF crystals reported thus far.27,40 While I afforded very weak X-ray diffraction peaks with a low resolution, comparable to those for protein crystals, we observed electron densities that match well with those of the heavy atoms (Au, Ag, Cu, S and P) in [1D]3+. Finally, the total structure of I was established by fitting the molecular structure of [1D]3+ obtained from the X-ray analysis of I′. The asymmetric unit of I contains one complete [1D]3+ cation, three half cations and a one-third unit of [1D]3+ cations (Fig. S6†). Thus, the total number of [1D]3+ cations in the unit cell was determined to be 272, based on the symmetry operation of the space group F4132. In I, the [1D]3+ cations are linked through CH⋯π interactions between tdme phenyl groups (Fig. S7†), generating a 3D mesoporous framework with a potential porosity of 66% (Fig. 3). Based on the elemental analysis and IR spectrum, the voids of the framework are considered to be occupied by TFA− anions and solvated water molecules. It is assumed that the concentration of the reaction solution at 25 °C results in an aqueous-rich phase due to the faster evaporation of organic solvents, leading to the hydrophobic self-assembly of [1D]3+ cations through CH⋯π interactions to crystallize the kinetic product of I; in contrast, the thermodynamic product of I′ is crystallized by slower evaporation at 0 °C. It should be noted that the recrystallization of I from water at 0 °C afforded I′, while I was generated by recrystallizing I′ at 25 °C.
![]() | ||
| Fig. 3 Crystal structure of I.‡ (a) A pentagonal window in cage A and cage B. (b) A hexagonal window in cage A. (c) Cage B. (d) Cage A. (e) Face-sharing cage A and cage B. (f) Schematic representation of the packing structure of a 6-connected mtn-e net (cage A and cage B are represented by red and orange colours, respectively, with [1D]3+ cations shown by balls) [colour codes: red, Au; silver, Ag; blue, Cu; orange, P; yellow, S; pink, O; pale blue, N; grey, C]. | ||
Topological analysis41,42 revealed that the framework in I adopts a 6-connected mtn-e net structure (Fig. 3 and S8†).43 This topology is the same as that of the MOF in MIL-101 with the formula [Cr3F(H2O)2O(1,4-bdc)3]·nH2O (1,4-bdc = 1,4-benzene dicarboxylate),26,43 replacing the trimeric building units of chromium(III) octahedra linked by 1,4-bdc anions through coordination bonds in MIL-101 by dodecanuclear [1D]3+ cations connected by CH⋯π interactions in I. While MIL-101 crystallized in the achiral space group Fd
m due to the achiral nature of the trimeric building units and the 1,4-bdc linkers, the homochirality of [1D]3+ cations with D-pen ligands led to crystallization of I in the chiral space group F4132. In addition, the cell volume of I (2
171
340 Å3) is three times larger than that of MIL-101 (701
860 Å3). As in MIL-101, the framework in I contains two types of mesoporous cages (cage A and cage B) in a 1
:
2 ratio (Fig. 3c and d). Cage A consists of 42 [1D]3+ cations with a [328·512·64] face arrangement,44 bearing 4 hexagonal windows with an internal diameter of 20.2 Å and 12 pentagonal windows with an internal diameter of 14.0 Å (Fig. 3a and b), while cage B consists of 30 [1D]3+ cations with [320·512] face arrangement (icosidodecahedron),44 having 12 pentagonal windows that are shared by cages A. The accessible volumes of cage A and cage B in I, which are occupied by TFA− anions and water molecules, are 64
000 Å3 (internal diameter 49.7 Å) and 29
000 Å3 (internal diameter of 38.2 Å), respectively. These are much larger than the corresponding cages in MIL-101 (20
600 Å3 with an internal diameter of 34 Å and 12
700 Å3 with an internal diameter of 29 Å).26
:
1
:
1 mixture of aqueous NaPF6, NaBF4 and NaOTf. Again, the single crystallinity was retained and the crystals thus obtained (IPF6/BF4/OTf) contained only PF6− as counter-anions. This implies that PF6− has a higher affinity for the cationic framework than do BF4− and OTf−, presumably due to the effective formation of NH⋯F and Ph⋯F interactions with [1D]3+ cations in the framework. Consistent with these results, IPF6 is much less soluble in water than I, IBF4 and IOTf,§ indicating that the cationic framework is reinforced by introducing PF6− as counter-anions.
Reinforcement of the cationic framework allowed the incorporation of the large organic anion BTB3− (H3BTB = 1,3,5-tris(4′-carboxyphenyl)benzene; Fig. S11†) with 3 carboxylate groups retaining the single crystallinity by soaking crystals of IPF6 in aqueous H3BTB for 1 h;45 the same treatment of crystals of I resulted in the loss of its crystallinity (Fig. S12†). The resulting crystals of IBTB, which are almost insoluble in water,§ are formulated as [1D](BTB)2/3(PF6) based on the IR spectrum (Fig. S13†) and elemental analyses, suggesting the presence of PF6− anions that tightly interact with the cationic framework. Not only the organic BTB3− but also the anionic metal-cluster [Rh4Zn4O(L-cys)12]6− with 12 carboxylate groups (Fig. S11†)46,47 was quickly incorporated into the cationic framework retaining the single crystallinity via the partial exchange of PF6− anions in IPF6; soaking crystals of IPF6 in aqueous K6[Rh4Zn4O(L-cys)12] for 1 h afforded single crystals of IRhZn formulated as [1D][Rh4Zn4O(L-cys)12]1/3(PF6), which are also insoluble in water.§¶
The cationic nature of the mesoporous framework in IPF6 also led to the quick uptake of an anionic dye of resorufin sodium salt from its aqueous solution, which was confirmed by tracing the absorption spectral change of the solution; the characteristic absorption band at 570 nm decreased with time and nearly disappeared on soaking crystals of IPF6 for 6 h (Fig. S16a†). This was also the case for another anionic dye of methyl orange,||** but no significant uptake was observed for a neutral dye of Basic Red 5 and a cationic dye of methylene blue (Fig. S16b–d†). The uptake of an anionic dye in IPF6 is in contrast to the uptake of a cationic dye in NU-1301, which has an anionic MOF structure.27 Note that soaking crystals of IPF6 in an aqueous solution containing methyl orange and methylene blue in a 1
:
1 ratio led to the disappearance of the absorption due to methyl orange after 6 h (Fig. 4). This result demonstrates that IPF6 has an ability to remove an anionic dye from a mixture of cationic and anionic dyes in solution.
:
1 mixture of [Au3(tdme)(D-Hpen)3] (D-H3LAu3) and [Au3(tdme)(L-Hpen)3] (L-H3LAu3) to clarify the importance of homochirality in the creation of the highly porous structure in I. From this reaction, blue hexagonal plate crystals (II′) were produced via slow evaporation at 0 °C, together with blue truncated octahedral crystals (II) as a minor product, while fast evaporation at 25 °C dominantly yielded crystals of II. Based on the IR and diffuse reflection spectra (Fig. S3 and S4†), together with the X-ray fluorescence and elemental analyses, II′ and II were both assigned to have the same chemical formula [AgI3CuII3(LAu3)2](TFA)3·nH2O, which corresponds to those of I′ and I. However, II′ and II are CD silent, indicative of the presence of both D-H3LAu3 and L-H3LAu3 in a 1
:
1 ratio. The powder X-ray diffraction patterns of II′ and II are different from each other and also different from the patterns of I′ and I (Fig. S18†). Single-crystal X-ray analysis indicated that II′ crystallized in the achiral space group of trigonal R3c. Each complex cation in II′ consists of two homochiral metalloligands, (D-LAu3)3− or (L-LAu3)3−, which are spanned by 3 AgI and 3 CuII atoms to give the homochiral AuI6AgI3CuII3 structure in [Ag3Cu3(D- or L-LAu3)2(H2O)3]3+ ([1DorL]3+) (Fig. S19†).
In addition, the homochiral complex cations of [1DorL]3+ were assembled with TFA− ions through hydrogen bonds to form a homochiral 2D layer in [1DorL](TFA)3 (Fig. 5a and b). While the layer structure in II′ is comparable to that in I′, the [1D](TFA)3 and [1L](TFA)3 layers are alternately, closely stacked in an off-set fashion in II′, resulting in an overall heterochiral structure (Fig. 5c).
II also crystallized in the achiral but different space group of trigonal R
c. As those in II′, the homochiral [1D]3+ or [1L]3+ cations in II are assembled to form homochiral 2D layers (Fig. 6a and b). In II, however, the complex cations are linked to each other through CH⋯π interactions, forming hexagonal void spaces surrounded by the 6 cations in each layer (Fig. S20†). In addition, the top and bottom of the hexagonal space are each covered by 3 complex cations with opposite chirality through CH⋯π interactions (Fig. 6c), affording a void space surrounded by 6 [1D]3+ and 6 [1L]3+ cations in a cuboctahedral structure, which are occupied by TFA− anions and water molecules (Fig. 6d and e). The pore volume of each cage in II is 16
800 Å3 (diameter 15.9 Å) with trigonal and rhomboidal windows (diameters of 8.3 Å and 11.4 Å), which is much smaller than those of the cages in I (64
000 Å3 and 29
000 Å3). The potential porosity of II (35%) is also less than that of I (66%). Thus, the heterochiral system with a 1
:
1 mixture of [1D]3+ and [1L]3+ resulted in the creation of a less porous structure in II with much smaller porous cages.
![]() | ||
| Fig. 6 Crystal structure of II. (a) 2D layer structure composed of [1D]3+ cations. (b) 2D layer structure composed of [1L]3+ cations. (c) Side view of the packing structure.†† (d and e) Enantiomeric nanoporous cages composed of [1D]3+ and [1L]3+ cations [colour codes: blue, D-[1]3+; orange, L-[1]3+]. | ||
Blue hexagonal plate crystals of [Ag3Cu3(L-LAu3)2](TFA)3 (I′L) were prepared by the same procedure as that employed for I′, using [Au3(tdme)(L-Hpen)3] instead of [Au3(tdme)(D-Hpen)3]. Anal. calcd for [Au6Ag3Cu3(tdme)2(L-pen)6(H2O)3](TFA)3·12H2O = C118H162Ag3Au6Cu3F9N6O33P6S6: C, 31.94; H, 3.68; N, 1.89%. Found: C, 31.94; H, 3.71; N, 1.99%. IR spectrum (cm−1, ATR): 1615 (νCOO−), 1102 (νP–Ph), 698 (νPh) and 1202 (νTFA−). Crystallographic data for I′L: trigonal P321, a = b = 19.2442(3) Å, c = 26.8194(4) Å, α = β = 90°, γ = 120°, V = 8601.6(3) Å3.
Blue octahedral crystals of [Ag3Cu3(L-LAu3)2](TFA)3 (IL) were prepared by the same procedure as that employed for I, using [Au3(tdme)(L-Hpen)3] instead of [Au3(tdme)(D-Hpen)3]. Anal. calcd for [Au6Ag3Cu3(tdme)2(L-pen)6(H2O)3](TFA)3·20H2O = C118H178Ag3Au6Cu3F9N6O41P6S6: C, 30.93; H, 3.92; N, 1.83%. Found: C, 31.17; H, 4.24; N, 1.93%. IR spectrum (cm−1, ATR): 1626 (νCOO−), 1101 (νP–Ph), 692 (νPh) and 1200 (νTFA−). Crystallographic data for IL: cubic F4132, a = b = c = 128.755(2) Å, α = β = γ = 90°, V = 2
134
481(119) Å3.
Anal. IPF6: calcd for [Au6Ag3Cu3(tdme)2(D-pen)6(H2O)3](PF6)3·18H2O = C112H174Ag3Au6Cu3F18N6O33P9S6: C, 28.98; H, 3.78; N, 1.81%. Found: C, 29.01; H, 3.72; N, 1.91%. IR spectrum (cm−1, ATR): 1634 (νCOO−), 1102 (νP–Ph), 697 (νPh) and 854
. Crystallographic data for IPF6: cubic F, a = b = c = 129.1080(20) Å, α = β = γ = 90°, V = 2
152
085(80) Å3.
Anal. IOTf: calcd for [Au6Ag3Cu3(tdme)2(D-pen)6(H2O)3](OTf)3·18H2O = C115H174Ag3Au6Cu3F9N6O42P6S9: C, 29.68; H, 3.77; N, 1.81%. Found: C, 29.69; H, 3.53; N, 1.87%. IR spectrum (cm−1, ATR): 1634 (νCOO−), 1103 (νP–Ph), 698 (νPh) and 1276, 1170, 1031, 640 (νOTf−). Crystallographic data for IOTf: cubic F, a = b = c = 128.27(6) Å, α = β = γ = 90°, V = 2
110
298(1600) Å3.
Anal. IBF4: anal. calcd for [Au6Ag3Cu3(tdme)2(D-pen)6(H2O)3](BF4)3·14H2O = C112H166Ag3Au6Cu3F12N6O29P6S6B3: C, 30.61; H, 3.81; N, 1.91%. Found: C, 30.58; H, 3.67; N, 1.89%. IR spectrum (cm−1, ATR): 1634 (νCOO−), 698 (νPh) and 1102
. Crystallographic data for IBF4: cubic F, a = b = c = 128.5(6) Å, α = β = γ = 90°, V = 2
121
793(19
000) Å3.
. Crystallographic data for IBTB: cubic F4132, a = b = c = 128.2485(23) Å, α = β = γ = 90°, V = 2
109
390(66) Å3.
. Crystallographic data for IRhZn: cubic F4132, a = b = c = 128.3373(24) Å, α = β = γ = 90°, V = 2
113
774(68) Å3.
For [Ag3(D-H3LAu3)2](NO3)3, DFIX, ISOR, DELU and SADI restraints and a FLAT constrain were applied to model nitrate anions. Global ISOR, RIGU and SIMU were applied. All nonhydrogen atoms were refined anisotropically. The contributions of undetermined NO3− ions and solvated water molecules were excluded using the SQUEEZE program in the PLATON package.50 4882 electrons were found in the void with a volume of 11
701 Å3 per unit cell by the mask calculation. The number of electrons is not consistent with the presence of 3 NO3− and 34 H2O per formula unit, which gives 3464 electrons per unit cell. The difference in the electron numbers is due to the loss of solvated water molecules in the course of the isolation of the bulk sample.
For I, the positions of Au, Ag, Cu, S and P atoms were solved by direct methods using SHELXS-2014 and refined by using full-matrix least-squares (SHELXL-2018/3).49 The molecular structure of each [1D]3+ complex-cation was fitted with that determined in I′ by using the FRAG command and refined as a rigid body. ISOR, DELU and SIMU restraints and a EADP constrain were applied to coordinated waters. Au and Ag atoms were refined anisotropically and Cu, S, P, O, N and C atoms were refined isotropically. The exclusion of the undetermined TFA− ions and solvated water molecules with SQUEEZE50 was not successful.
For I′, DFIX, ISOR, DELU, SIMU and SADI restraints were applied to model trifluoro acetate anions. All nonhydrogen atoms except for crystal water molecules were refined anisotropically. Six diffractions were omitted to improve the data quality. 669 electrons were found in the void with a volume of 2117 Å3 per unit cell by the mask calculation. The number of electrons is not consistent with the presence of 8 H2O per formula unit, which gives 160 electrons per unit cell. The difference in the electron numbers is due to the loss of solvated water molecules in the course of the isolation of the bulk sample.
For II, ISOR, DELU and SIMU restraints were applied for coordinated water molecules. Global SIMU were applied. All nonhydrogen atoms were refined anisotropically. The contributions of undetermined TFA− ions and solvated water molecules were excluded using the SQUEEZE program in the PLATON package.50 Nineteen diffractions were omitted to improve the data quality. 9168 electrons were found in the void with a volume of 30
609 Å3 per unit cell by the mask calculation. The number of electrons is not consistent with the presence of 3 TFA− and 12.5 H2O per formula unit, which gives 5220 electrons per unit cell. The difference in the electron numbers is due to the loss of solvated water molecules in the course of the isolation of the bulk sample.
For II′, DFIX, ISOR, DELU, SIMU, RIGU and SADI restraints were applied to model trifluoro acetate anions and parts of [1D]3+ complex-cation. All nonhydrogen atoms were refined anisotropically. Two diffractions were omitted to improve the data quality. The exclusion of the undetermined TFA− ions and solvated water molecules with SQUEEZE was not successful. 1685 electrons were found in the void with a volume of 6288 Å3 per unit cell by the mask calculation. The number of electrons is compatible with the presence of 2 TFA− and 15 H2O per formula unit, which gives 1560 electrons per unit cell.
Footnotes |
| † Electronic supplementary information (ESI) available: Experimental detail, PXRD, and XRF, IR, adsorption, diffuse reflectance, and CD spectra, as well as crystal structures and crystallographic data. CCDC 2024986–2024990. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/d1sc02497c |
| ‡ The TFA− anions and solvated water molecules that might be highly disordered in I were not located due to the weak electron densities and the very large cell volume of I. |
| § The solubilities of crystals in water at room temperature were evaluated to be 0.7 mg mL−1, 0.4 mg mL−1, and 0.3 mg mL−1 for IPF6, IRhZn, and IBTB, respectively, based on the absorption spectral measurements. |
| ¶ The presence of the RhIII4ZnII4 cluster anions in IRhZn, together with PF6−, was confirmed by the IR spectrum (Fig. S14†) and the X-ray fluorescence and elemental analyses, together with the solid-state CD spectra (Fig. S15†). |
| || The PXRDs of IPF6 were much broaden after the uptake of methyl orange, which is indicative of the partial collapse of the cationic framework (Fig. S12d†). |
| ** The adsorbed methyl orange was removal from the crystals by soaking in 0.2 M aqueous NaPF6, which was confirmed by the absorption spectral measurements (Fig. S17†). |
| †† The TFA− anions and solvated water molecules were not located due to their positional disorder. |
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