Alicja
Graczyk
,
Justyna M.
Żurek
and
Martin J.
Paterson
*
Institute of Chemical Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK. E-mail: m.j.paterson@hw.ac.uk
First published on 8th November 2013
A theoretical analysis of linear and non-linear (two-photon absorption) electronic spectroscopy of all known porphyrinic pigments has been performed using linear and quadratic density functional response theory, with the long-range corrected CAM-B3LYP functional. We found that higher Soret transitions often contain non-Gouterman contributions and that each chlorophyll has the possibility for resonance enhanced TPA in the Soret region, although there is also significant TPA in the Q region.
Chlorophylls participate in the most fundamental reaction for living organisms, photosynthesis.1,11 Through the production of carbohydrates and molecular oxygen, photosynthesis, directly or indirectly, supports most life on our planet. Chlorophylls form part of the photosynthetic apparatus and contribute to its stabilisation. They are collected in chloroplasts in plants, which are one of the building blocks of the photosynthetic antenna.12 They participate in the first stage of photosynthesis, so-called light reactions. Their role can be briefly described as capturing photons of light and transferring the excitation energy to nearby reaction centres in the process of Förster resonance energy transfer.13
The most abundant type of photosynthetic pigment is chlorophyll a, which was the first one isolated (in 1817) and has been the most frequently studied. Chlorophyll f, on the other hand, is a very recent discovery. It was first recognized and described in the second half of 2010.14 As a consequence, very little research has been done on this molecule.
The family of chlorophyll molecules covers most of the photosynthetically useful spectra with extremely intense absorption in the blue region – the Soret band (330–480 nm), also called the B band, and less intense red regions – Q bands (620–1050 nm).7 Such a long absorption range makes chlorophylls good systems for OPA and TPA studies with potential applications in ecophysiology, biochemistry, biophysics and also medicine. TPA studies have gained increasing importance in recent years. This is due to their wide applications in fluorescence imaging, photonics, optical data storage, and most importantly production of singlet oxygen with applications in photodynamic anticancer therapy.15–20 Anticancer photodynamic therapy is a relatively new branch of medical technology which requires a photosensitizer, light of a wavelength suitable for absorption by the photosensitizer, and molecular oxygen.21 The absorption properties of a photosensitizer are clearly very important. A PDT drug must be able to absorb in the therapeutic window, which ranges from 600 to 800 nm. Light absorption and scattering in tissue depend on the wavelength of the electromagnetic radiation. The optical window for tissue penetration lies in the range of 600–1300 nm. Its lower limit is set by principal tissue chromophores, such as melanin, haemoglobin and cytochromes, which have high absorption bands below 600 nm. The upper limit is set by the water absorption of near infrared light.22 The other important aspect is that light of a wavelength exceeding 800 nm is unable to activate the photosensitizer. Therefore the search for ideal photosensitizers concentrates on ones absorbing in the red, which possess a high tissue penetration power and are energetic enough to produce singlet oxygen. In a TPA process the electronic transition of a molecule can be thought of as the simultaneous absorption of two photons. The use of this non-linear technique in PDT has been an attractive alternative to OPA since the development of high-power femtosecond lasers.23 One of the advantages of TPA over OPA includes the fact that the population of the excited state is quadratically proportional to the incident light intensity; therefore the maximum absorption occurs at the focal point of the laser beam.24 Because of this, there is potential to provide highly targeted treatment for tumours, since excitation can be pinpointed to small volumes at the focus of a laser.17 Another advantage of TPA is the possibility to use pulses of light in the near-infrared region (750–900 nm). Because light with this wavelength penetrates tissue more deeply than visible light, PDT therapy can be more effective. Also TPA opens the possibility of excitations forbidden in OPA.25 Non-linear spectroscopy is however very challenging to study both experimentally and theoretically. There have been a few experimental studies on TPA spectroscopy of chlorophylls and other organic pigments26–30 but very few on their computational modelling.31,32 There is however much more computational research on OPA spectroscopy of chlorophylls.33–42 In 1960 the American theoretical chemist Gouterman developed a theory of metal-free porphyrin UV-Vis spectra, the so-called four-orbital model, which describes the positions and character of main electronic transitions in such systems.1,43 Later this theory was extended to porphyrins containing metal ions. According to this model, the Soret and the Q bands are the result of the electronic transitions between four orbitals, i.e., HOMO and HOMO−1 π orbitals to LUMO and LUMO+1 π* orbitals. These orbitals are centered on the porphyrin core. In a metal-containing D4h porphyrin, the LUMO and LUMO+1 π* orbitals are degenerate by symmetry, while the HOMO and HOMO−1 π orbitals are nearly degenerate. Gouterman labeled the HOMO orbitals as a1u and a2u, while LUMO orbitals were designated as egy and egx. Therefore the possible transitions between these orbitals are a1u → egy and a2u → egx, having x polarization, and a1u → egx and a2u → egx, having y polarization. The x and y polarized excited states are further mixed and split in energy by configuration interaction and form two transitions of low intensity and energy (Qx and Qy, with Qy being a lower energy transition than Qx and also of higher intensity), and two high intensity and higher energy transitions (Bx and By).1 Some recent studies of OPA of chlorophylls and similar systems will now be presented. Linnanto et al. performed studies on spectroscopic properties of a, b, c1, c2, c3, and d chlorophylls using semi-empirical ZINDO/S CIS (15,15) and PM3 CISD (5,5) methods and also the ab initio CIS (5,5)/6-31G(d) method.37Ab initio CIS(5,5) methods turned out to overestimate the transition energies of the lowest excited states of the studied chlorophylls while the obtained energies when using semi-empirical methods were very close to experiments. This is not surprising as semi-empirical methods use experimental parametrisation. The semi-empirical PM3 CISD (5,5) method had problems with predicting the oscillator strengths of studied transitions. Vokáčová and Burda used TD-DFT to study the spectroscopy of chlorophylls a, b, c1, c2, c3, and d, different bacteriochlorophylls, phycobilins and carotenoids.35 In the case of (bacterio)-chlorophylls the phytyl chain was removed from the structure and replaced by a methyl group. TD-DFT with the B3PW91 functional and the 6-31+G(d) basis set were used. The authors have obtained qualitatively good agreement with experimental spectra. The calculated values for the Qy band were blue-shifted in comparison with experimental values by about 60–80 nm and about 20–30 nm for the Qx and Soret (B) bands. The four-orbital model of Gouterman turned out to be a reasonably good approximation within TD-DFT. The main electronic transitions were based mainly on four Gouterman MOs. Other studies by the Amos group include TD-DFT, CASPT2 and SAC-CI (symmetry-adapted cluster-configuration interaction) calculations on chlorophyll a, porphyrin and two oligoporphyrins of charge transfer N-band transitions located between Q and Soret bands.38 For TD-DFT studies different functionals with a 6-31G(d) basis set were used. Due to the poor description of charge transfer processes by standard DFT functionals the authors used long-range corrected TD-CAM-B3LYP and compared the results against the current-density functional (CDFT) of van Faassen, de Boeij, van Leeuwen, Berger, and Snijders which was found to provide a good description of long-range interactions of some conjugated systems. SAOP GGA, B3LYP and BP86 functionals were also used for completeness. They have found that amongst all DFT methods used, only CAM-B3LYP properly predicts HOMO–LUMO energy gaps and the positions and character of charge transfer bands between Q and Soret bands in chlorophyll a and other systems. In general, CASPT2 results with a (16,15) active space were the most qualitatively accurate and the reason for this could be a contribution from double or higher excitations. However, this is also the most expensive method, which requires a lot of computational and chemical insight. SAC-CI and CAM-B3LYP results were found to overestimate the Q-Soret splitting but overall they were also in reasonable agreement with experimental values. Due to the large computational scaling of the SAC-CI method it was concluded that CAM-B3LYP, amongst all, is the easiest and at the same time cost-effective method, which gives applicable accuracy for systems where charge-transfer states may be of importance.
Due to the important chlorophyll applications mentioned above, understanding the interaction of light with chlorophylls is crucial. This paper will focus on studies of the OPA and TPA spectra of all known chlorophylls a–f using time-dependent response density functional theory with the CAM-B3LYP functional which was previously found to give very reliable results for OPA and TPA studies, in a wide range of systems, due to its correct asymptotic behaviour.31,44–46 Such full linear and non-linear spectroscopic studies on all known chlorophylls have not been performed to date.
δTP = FδF + GδG + HδH |
The coefficients F, G and H are based on the polarisation of the incident photons and in this paper they will be used for the conditions of parallel linearly polarised light beams; thus F = G = H = 2. Experimentally the two-photon absorption cross-sections of molecules are reported in Goeppert-Mayer (GM) units, where 1 GM equals 10−50 cm4 s photon−1 molecule−1. However, in this work the TPA cross-sections (here directly transition strengths) are shown in atomic units.48
The structure of chlorophyll a found in the Chemical Entities of Biological Interest (ChEBI) database was chosen for initial studies.49 The influence of the phytyl tail on spectroscopic properties of chlorophyll a was examined and found to be minimal and so for further studies it was replaced with a methyl group to reduce the computational cost. This is presented in Fig. S1 of ESI.† Other conformers of chlorophyll a with a methyl instead of a phytyl tail were built based on the ChEBI structure and their total free energies were compared. Similarly conformers of other chlorophylls were built by changing appropriate ligands as shown in Fig. 1. The effect of the basis set on the (geometrical) structure of a simple chlorophyll model was examined using 6-31G(d), cc-pVDZ, cc-pVTZ, and aug-cc-pVDZ basis sets, and on the spectral properties using 6-31G(d), cc-pVDZ, and cc-pVTZ basis sets, and it was found to be of minor importance. Thus for our studies the 6-31G(d) basis set was used as a cost-effective choice. The influence of different DFT functionals on the structure of the same chlorophyll model gave only minimal changes in bond lengths (∼0.01–0.02 Å) and angles (<1°). The geometries of all studied chlorophylls a–f and their conformers were optimised using the CAM-B3LYP functional and the 6-31G(d) basis set. The structures of each chlorophyll having the lowest total free energy were chosen for further spectroscopic studies. The effect of the DFT functional on the spectroscopic features of chlorophyll a was examined using B3PW91, B3LYP, CAM-B3LYP, and BP86. These results are presented in ESI Fig. S2 and S3.† The qualitative spectral features of chlorophyll a calculated with these functionals are very similar. The positions of the Q bands with B3PW91, B3LYP and CAM-B3LYP were almost identical, and only differed slightly in intensity. An approximately 20 nm red-shift was observed for BP86 compared to other functionals. The positions of the B bands slightly differ between the different functionals used, with the CAM-B3LYP obtained B band being the most blue-shifted compared to experiments and BP86 the least. As mentioned in the introduction the CAM-B3LYP functional is known to properly describe the HOMO–LUMO energy gaps, positions and character of charge transfer bands between Q and B bands in such systems; thus TD-CAM-B3LYP with the 6-31G(d) basis set was used for further study of OPA spectra. In the computed spectra two different phenomenological broadening factors were considered. A 20 nm Gaussian broadening factor was chosen to compare the computed spectra with the experimental ones. The stick spectrum, produced by applying the broadening factor of 0.5 nm, was generated in order to illustrate the electronic transitions. The effect of solvents on spectra was examined using the SMD model50 with diethyl ether as a solvent for chlorophylls a–d and methanol for chlorophyll f for better comparison of calculated UV-Vis spectra with experiments. The first 15 excited states were considered for both OPA and TPA spectroscopic properties of all studied chlorophylls. The Gaussian 09c program was used for all geometry optimisations and OPA calculations, whereas TPA CAM-B3LYP studies were performed using the Dalton 2011 program.
Method | TD-CAM-B3LYP (gas phase)a | TD-CAM-B3LYP (SMD model) | Experimentb |
---|---|---|---|
a TD-CAM-B3LYP computed spectra in the gas phase with two different Gaussian broadening factors of 20 and 0.5 nm, the character of main transitions, and their contribution in % for canonical orbitals or 1-particle transition density matrix eigenvalues for natural transition orbitals (NTOs). b Experimental bands for chlorophylls a–d recorded in diethyl ether solvent7 and chlorophyll f in methanol.14 | |||
Chlorophyll a | |||
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λ [nm] Qy | 570 | 581 | 662 |
Osc. str. | 0.2281 | 0.3243 | — |
λ [nm] Qx | 484 | 488 | 578 |
Osc. str. | 0.0273 | 0.0602 | — |
λ [nm] B | 355 | 370 | 430 |
Osc. str. | 0.9272 | 1.1871 | — |
337 | 345 | ||
0.2517 | 0.7728 | ||
331 | 341 | ||
0.8331 | 0.4852 | ||
Chlorophyll b | |||
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λ [nm] Qy | 545 | 552 | 644 |
Osc. str. | 0.1456 | 0.2045 | — |
λ [nm] Qx | 472 | 475 | 549 |
Osc. str. | 0.0062 | 0.0127 | — |
λ [nm] B | 371 | 390 | 455 |
Osc. str. | 0.9995 | 1.3133 | — |
355 | 369 | ||
0.8721 | 0.9854 | ||
Chlorophyll c1 | |||
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λ [nm] Qy | 557 | 562 | 628 |
Osc. str. | 0.0538 | 0.0827 | — |
λ [nm] Qx | 546 | 549 | 578 |
Osc. str. | 0.0011 | 0.0024 | — |
λ [nm] B | 366 | 384 | 444 |
Osc. str. | 1.0082 | 1.4998 | — |
362 | 381 | ||
1.2758 | 1.3679 | ||
Chlorophyll c2 | |||
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λ [nm] Qy | 562 | 566 | 628 |
Osc. str. | 0.0284 | 0.0421 | — |
λ [nm] Qx | 552 | 556 | 579 |
Osc. str. | 0.0029 | 0.0016 | — |
λ [nm] B | 375 | 392 | 448 |
Osc. str. | 0.9328 | 1.366 | — |
370 | 390 | ||
1.1987 | 1.411 | ||
Chlorophyll c3 | |||
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λ [nm] Qy | 559 | 562 | 626 |
Osc. str. | 0.0035 | 0.0019 | — |
λ [nm] Qx | 552 | 555 | 586 |
Osc. str. | 0.0279 | 0.0402 | — |
λ [nm] B | 380 | 397 | 452 |
Osc. str. | 0.9088 | 1.4682 | — |
377 | 396 | ||
1.3752 | 1.3897 | ||
Chlorophyll d | |||
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λ [nm] Qy | 601 | 616 | 668 |
Osc. Str. | 0.2383 | 0.3302 | — |
λ [nm] Qx | 509 | 516 | — |
Osc. str. | 0.0296 | 0.058 | — |
λ [nm] B | 369 | 386 | 447 |
Osc. str. | 0.8243 | 1.0409 | — |
342 | 349 | ||
0.0004 | 0.9564 | ||
337 | |||
0.7563 | |||
Chlorophyll f | |||
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λ [nm] Qy | 600 | 620 | 712 |
Osc. str. | 0.2801 | 0.4228 | — |
λ [nm] Qx | 511 | 518 | 654 |
Osc. str. | 0.0413 | 0.0965 | — |
λ [nm] B | 363 | 375 | 444 |
Osc. str. | 0.7866 | 0.9062 | — |
345 | 346 | 408 | |
0.0579 | 1.1823 | — | |
338 | |||
0.1443 | |||
337 | |||
0.7992 |
The average red shift for Qx bands here of around 5 nm is observed for chlorophylls a–c3 and f. The smallest influence of the solvent on the Qy bands is observed for chlorophyll c3 (3 nm) and the largest for chlorophyll f (20 nm). The chemical nature of the main spectroscopic bands has been shown in the right part of each spectrum and is determined by studying the canonical Kohn–Sham orbitals that take part in the main electronic transitions present. From this it can be seen that the two main transitions in the Soret band as well as transitions in the Qy and Qx bands are all between the frontier molecular orbitals located on the chlorophyll core, as predicted by Gouterman. Due to some orbital mixing present for chlorophylls c1, c2 and c3, natural transition orbitals (NTOs)52 were used to determine their main excitations, which in the end also resembled Gouterman orbitals. For the Soret band of chlorophyll a it has been noticed that the HOMO−2 orbital becomes significant and for chlorophyll b, the LUMO+2 orbital. This has already been seen for spectroscopy of porphycene core based systems and may imply that the Gouterman model should be treated with caution when discussing Soret bands of these systems.45,53 No charge transfer transitions have been observed. In Table 1 only the largest contributions to transitions have been shown. A detailed analysis of the spectral character of the studied chlorophylls is presented in ESI Fig. S8–S14.† From these results it can be concluded that calculated spectra are qualitatively very well comparable with experimental ones and can be used to help rationalise and assign experimental spectra of porphyrins and derivatives based on general trends, although quantitative spectral data are still problematic with TD-DFT.
Chlorophyll a | Chlorophyll b | ||
---|---|---|---|
λ [nm] | δ [a.u.] | λ [nm] | δ [a.u.] |
571 | 519 | 544 | 760 |
484 | 3220 | 473 | 3560 |
334 | 9080 | 371 | 4230 |
337 | 5850 | 355 | 460 |
332 | 676 | 341 | 2020 |
327 | 14.1 | 330 | 1.99 |
322 | 1460 | 323 | 3.04 |
299 | 58![]() |
308 | 1160 |
279 | 74![]() |
287 | 19![]() |
275 | 2![]() ![]() |
272 | 3.62 × 1011 |
262 | 83![]() |
271 | 71![]() ![]() |
259 | 241![]() |
266 | 2![]() ![]() |
247 | 13![]() |
263 | 306![]() |
246 | 188![]() |
257 | 7780 |
240 | 303![]() |
257 | 8620 |
Chlorophyll d | Chlorophyll f | ||
---|---|---|---|
λ [nm] | δ [a.u.] | λ [nm] | δ [a.u.] |
602 | 473 | 599 | 478 |
508 | 3170 | 510 | 2820 |
369 | 18![]() |
364 | 24![]() |
342 | 1.78 | 345 | 2120 |
338 | 1500 | 339 | 295 |
334 | 49.9 | 337 | 3040 |
333 | 4030 | 330 | 12![]() |
316 | 39![]() |
323 | 10![]() |
298 | 179![]() ![]() |
305 | 13![]() ![]() |
293 | 9500 | 297 | 300![]() ![]() |
283 | 1![]() ![]() |
287 | 1![]() ![]() |
274 | 65![]() |
286 | 18![]() |
263 | 148![]() |
271 | 18![]() |
253 | 2![]() ![]() |
254 | 31![]() ![]() |
251 | 576![]() |
252 | 1![]() ![]() |
Chlorophyll c1 | Chlorophyll c2 | Chlorophyll c3 | |||
---|---|---|---|---|---|
λ [nm] | δ [a.u.] | λ [nm] | δ [a.u.] | λ [nm] | δ [a.u.] |
558 | 191 | 561 | 202 | 558 | 47.2 |
546 | 148 | 554 | 256 | 551 | 457 |
366 | 230 | 376 | 305 | 379 | 282 |
363 | 439 | 370 | 269 | 377 | 243 |
333 | 828 | 335 | 325 | 337 | 1890 |
329 | 93.8 | 331 | 185 | 331 | 536 |
316 | 247 | 329 | 188 | 329 | 338 |
310 | 2050 | 325 | 1810 | 313 | 2440 |
302 | 951 | 309 | 3770 | 307 | 44![]() |
294 | 59![]() |
303 | 6480 | 300 | 2950 |
288 | 64![]() |
295 | 59![]() |
297 | 4320 |
282 | 28![]() |
290 | 8680 | 296 | 4790 |
280 | 7![]() ![]() |
286 | 34![]() |
280 | 571![]() |
277 | 4![]() ![]() |
284 | 259![]() |
276 | 6.5 × 1012 |
253 | 9030 | 263 | 4770 | 274 | 914![]() |
Problems of standard molecular response theory can occur near the resonance region Soret because the excited states have infinite lifetimes when standard molecular functions are derived.55 Thus, damped response theory methods have been developed to sort out this problem, which remove the singularities of the response functions at the resonance frequencies.55,56 Even without using damped response theory, standard methods inform that there will be very large TPA cross-sections in certain chlorophylls due to accidental degeneracy between Soret and Q states (Table 4). Thus for example each chlorophyll has states in the Soret region with very large TPA cross-sections but these are shifted relative to each other by the specific nature of the chlorophyll. This is similar to what is observed with electronic fine tuning of macrocyclic cores.46 Also of interest here is the significant TPA in the Q region itself; although orders of magnitude less than the resonance enhanced Soret TPA, it is still intense enough to be of interest in PDT as discussed above.
System | Q region in OPA [nm] | Soret region in TPA [nm] |
---|---|---|
Chlorophyll a | 570 | 275 |
Chlorophyll b | 545 | 272 |
Chlorophyll c1 | 557 | 280 |
Chlorophyll c2 | 562 | 284 |
Chlorophyll c3 | 559 | 276 |
Chlorophyll d | 601 | 298 |
509 | 253 | |
Chlorophyll f | 600 | 297 |
511 | 254 |
Footnote |
† Electronic supplementary information (ESI) available: The effect of phytyl tail presence on one-photon absorption spectra of chlorophyll a; TD-DFT functional comparison; comparison with experimental spectra; detailed transition analysis; Cartesian coordinates for all species studied. See DOI: 10.1039/c3pp50262g |
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