DOI:
10.1039/B919616A
(Communication)
Org. Biomol. Chem., 2010,
8, 53-55
Synthesis, structure and properties of decakis(phenylthio)corannulene†‡
Received 21st September 2009, Accepted 7th October 2009
First published on 20th October 2009
Abstract
Decakis(phenylthio)corannulene has been prepared from decachlorocorannulene by direct nucleophilic substitution; electronic structure properties and the X-ray crystal structure were determined and compared to predictions made by ab initio quantum chemical calculations.
Decasubstitution of corannulene (1) reduces the depth of the bowl through steric effects around the rim, and tunes the electronic properties of the π system according to the nature of the substituents.1 Exhaustive over-chlorination/dechlorination of corannulene yields decachlorocorannulene (2),2 through which decamethyl (3),3 decapentynyl (4),4 decakis(alkylthio) and decakis(arylthio)-corannulenes.2a,5 have been prepared. The electron diffraction structure of 2 as well as the crystal structure of 4 clearly display a shallower bowl,4,6 but as predicted computationally, about 50% of the bowl depth persists compared to 1 even when the steric repulsion of persubstitution reduces the bowl-inversion barrier from ca. 12 to ca. 1 kcal mol−1.7 The strain in 4 can also be relieved by an enediyne rearrangement in which one ring of the aromatic core opens to a 10 annulene and renders the π system planar.4 Corannulene derivatives 2–4 vary in their ability to accept/donate electrons.2c,8 The effect of sulfur, as in decakis(phenylthio)corannulene (5), should be greater based on other per(R-thio)-substituted aromatics.9 This work presents the X-ray crystal structure, quantum chemical structure and selected physical properties of 5.Direct nucleophilic substitution by thiophenoxide on 2 proceeds cleanly to yield 5. Slow diffusion of methanol to a benzene solution of 5 produced red crystals suitable for X-ray crystallographic analysis.10 The crystal structure revealed a monoclinic unit cell with symmetry P21/n. The asymmetric unit contained one molecule disordered about two molecular orientations with equal population, wherein the thiophenol units overlap, but the corannulene bowls are inverted and antiparallel to one another (Fig. 1).
 |
| Fig. 1 Disordered molecular structure of 5 from X-ray diffraction analysis: Left – face on shows the antiparallel overlap of the corannulene cores; right – edge on shows the overlap of two bowl inversion orientations; in all cases the thiophenol units overlap with unresolvable positional disorder. | |
Molecules of 5 adopt a crystal packing motif wherein the overlapping phenyl residues define a layer of interdigitated aryl fingers distinct from a disordered layer of corannulene bowls (Fig. 2).
 |
| Fig. 2 Packing diagram of disordered 5. The structure displays layered regions of aryl fingers and sulfur substituted corannulene bowls. | |
Given the molecular disorder and the reduction of molecular symmetry in the crystal, average values of chemical equivalent carbon–carbon bond lengths are reported: 1.416 Å (hub), 1.376 Å (spoke), 1.434 Å (flank), 1.384 Å (rim). The bonding pattern resembles well that of the parent 1 distorted by compression of the hub and stretching of the rim. The bowl depth in 5 is 0.320 Å (hub-to-spoke) and 0.486 Å (hub-to-rim), between 55–60% the depth of corannulene.
Absorption spectra of 5 show maxima at 200 (5.41), 375 (5.21), and 410 (4.75) nm (log e), substantially longer wavelengths than that of 1 and comparable to C60.11 No appreciable emission was detected.
Cyclic voltammetry on an acetonitrile (0.1 M tetrabutylammonium hexafluorophosphate) solution of 5 displayed fours waves at −1.22, −1.62, −2.04, and −2.28 volts vs. Ag/AgNO3. Values for 1 under comparable conditions are −2.23 and −2.84 volts.2c,12 The ease of the first reduction of 5 is on a par with the value of −1.06 volts for the first reduction of C60.13
The electronic structure and physical properties of 5 were calculated using the DFT B98 functional (Fig. 3).14 The computation predicts greater distortion of the rim bonds and less compression of the hub compared to corannulene: 1.414 Å (hub), 1.386 Å (spoke), 1.466 Å (flank), 1.425 Å (rim); bowl depths of 0.40 (hub-to-spoke), 0.63 (hub-to-rim). An idealized D5 transition state to bowl inversion is calculated to be 8.28 kcal mol−1 higher than the C1 conformer, including ZPE (C1 0.0, C5 3.67, D5 8.28 kcal mol−1).
 |
| Fig. 3 Ab initio C5 molecular structure of 5. Face and edge views depicting the edge-to-face arene interactions (cf.Fig. 1). | |
Frontier molecular orbital analysis accounts for the longer wavelength absorption spectrum and lower reduction potential of 5vis a vis1. The LUMO of 5 extends beyond the core π system to include the adjacent sulfur atoms (Fig. 4). The larger “box” correlates to lower energy transitions and lower lying radical anion states. Empirically, the smaller HOMO/LUMO gap is evidenced by the deep red color of 5 compared to the pale yellow of 1, 2 and 3.
 |
| Fig. 4 LUMO of 5 (isocontour value 0.01 a.u.). | |
The alternate up-down conformation adopted by 5 in combination with its packing in the crystal stimulates the possible use of such corannulene derivatives as ordered materials. The additional fact that 5 and cognates have a standing dipole moment, absorb light well at long wavelength and are roughly as easy to reduce as C60, adds a functional component to exploit. In the area of electro-active liquid crystals, related decakis(X-thio) corannulenes have already proven this principle.5d
Acknowledgements
We thank the US-National Science Foundation and Swiss National Foundation for funding.Notes and references
- Y.-T. Wu and J. S. Siegel, Chem. Rev., 2006, 106, 4843–4867 CrossRef CAS.
-
(a) P. C. Cheng, Ph.D. Dissertation, Boston College: Boston, 1996, pp 212 Search PubMed;
(b) L. T. Scott, Pure Appl. Chem., 1996, 68, 291–300 CrossRef CAS;
(c) T. J. Seiders, E. Elliott, G. Grube and J. S. Siegel, J. Am. Chem. Soc., 1999, 121, 7804–7813 CrossRef CAS.
- T. J. Seiders, K. K. Baldridge, E. Elliott, G. Grube and J. S. Siegel, J. Am. Chem. Soc., 1999, 121, 7439–7440 CrossRef CAS.
- T. Hayama, Y.-T. Wu, A. Linden, K. K. Baldridge and J. S. Siegel, J. Am. Chem. Soc., 2007, 129, 12612 CrossRef CAS.
-
(a) T. J. Seiders, Dissertation UCSD, 1999;
(b) M. Bancu, A. K. Rai, P.-C. Cheng, R. D. Gilardi and L. T. Scott, Synlett, 2004, 173 CAS;
(c) P. E. Georghiou, A. H. Tran, S. Mizyed, M. Bancu and L. T. Scott, J. Org. Chem., 2005, 70, 6158 CrossRef CAS;
(d) D. Miyajima, K. Tashiro, F. Araoka, H. Takezoe, J. Kim, K. Kato, M. Takata and T. Aida, J. Am. Chem. Soc., 2009, 131, 44–45 CrossRef CAS.
- S. Samdal, L. Hedberg, K. Hedberg, A. D. Richardson, M. Bancu and L. T. Scott, J. Phys. Chem., 2003, 107, 411 Search PubMed.
- T. J. Seiders, G. Grube, K. K. Baldridge and J. S. Siegel, J. Am. Chem. Soc., 2001, 123, 517–25 CrossRef.
- K. K. Baldridge and J. S. Siegel, Theor. Chem. Acc., 2008, 120, 95–106 CrossRef CAS.
-
(a) M. Mayor, J.-M. Lehn, K. M. Fromm and D. Fenske, Angew. Chem., Int. Ed. Engl., 1997, 36, 2370 CrossRef CAS;
(b) M. Mayor and J.-M. Lehn, J. Am. Chem. Soc., 1999, 121, 11231–11232 CrossRef CAS.
- A crystal of 5 was placed on a Bruker SMART 1000 CCD sealed tube diffractometer with graphite monochromated Mo-Kα radiation (0.71073 Å). The crystal was found to be monoclinic, P21/n, with unit cell dimensions of 15.227(3), 15.372(3). 16.161(3) Å, β = 92.447(3)° and a volume of 3779.3(11) Å3. Data were measured at 153 K and processed using SMART10a and SAINT10b software. The structure was solved by Direct Methods and Fourier techniques using SHELXTL10c.
(a) Bruker SMART, Bruker AXS Inc., Madison, WI, USA Search PubMed;
(b) Bruker SAINT, Bruker AXS Inc., Madison, WI, USA Search PubMed;
(c) G. M. Sheldrick, A short history of SHELX, Acta Crystallogr., Sect. A, 2008, 64, 112–122 . Additional information is contained in the Supplemental Information.
-
(a) H. Ajie, M. M. Alvarez, S. J. Anz, R. D. Beck, F. Diederich, K. Fostiropoulos, D. R. Huffman, W. Kraetschmer, Y. Rubin, K. E. Schriver, D. Sensharma and R. L. Whetten, J. Phys. Chem., 1990, 94, 8630–8633 CrossRef CAS;
(b) J. Catalan, New J. Chem., 1995, 19, 1233–1242 Search PubMed.
-
(a) J. Janata, J. Gendell, C. Ling, W. Barth, L. Backes, H. B. Mark and R. G. Lawton, J. Am. Chem. Soc., 1967, 89, 3056–3058 CrossRef CAS;
(b) T. J. Seiders, K. K. Baldridge, J. S. Siegel and R. Gleiter, Tetrahedron Lett., 2000, 41, 4519–4522 CrossRef CAS;
(c) C. Bruno, R. Benassi, A. Passalacqua, F. Paolucci, C. Fontanesi, M. Marcaccio, E. A. Jackson and L. T. Scott, J. Phys. Chem. B, 2009, 113, 1954–1962 CrossRef CAS.
-
(a) F. Arias, Q. Xie, Y. Wu, Q. Lu, S. R. Wilson and L. Echegoyen, J. Am. Chem. Soc., 1994, 116, 6388–6394 CrossRef CAS;
(b) Y. Yang, F. Arias, L. Echegoyen, L. P. F. Chibante, S. Flanagan, A. Robertson and L. J. Wilson, J. Am. Chem. Soc., 1995, 117, 7801–7804 CrossRef CAS.
- Computational Methods: The conformational analyses of the molecular systems described in this study, including structural, molecular orbital, and property calculations, were carried out using GAMESS14a. The computations employed included several DFT methods for comparison: B97-1,14b B98,14c B97-D,14d and B3LYP,14e with Dunning's full and valence double-ζ sets supplemented with (2d,p) polarization, DZ(2d,p),14f and DZV(2d,p),14f (see EMSL basis set library, e.g., DZ (Dunning)). Reported here is B98/DZ(2d,p). Full geometry optimizations were performed and uniquely characterized via Hessian analysis. Molecular orbital contour plots were generated and depicted using WEBMO,14g and QMView:14h
(a) M. W. Schmidt, K. K. Baldridge, J. A. Boatz, S. T. Elbert, M. S. Gordon, J. H. Jensen, S. Koseki, N. Matsunaga, K. A. Nguyen, S. Su and T. L. Windus, J. Comput. Chem., 1993, 14, 1347 CrossRef CAS;
(b) F. A. Hamprecht, A. J. Cohen, D. J. Tozer and N. C. Handy, J. Chem. Phys., 1998, 109, 6264 CrossRef CAS;
(c) C. Adamo and V. Barone, Chem. Phys. Lett., 1998, 298, 113 CrossRef CAS;
(d) S. Grimme, J. Comput. Chem., 2006, 27, 1787 CrossRef;
(e) A. D. Becke, J. Chem. Phys., 1993, 98, 5648 CrossRef CAS;
(f) T. H. Dunning Jr and P. J. Hay, in Modern Theoretical Chemistry, E. H. F. Schaefer III, ed., Plenum, N.Y., 1976, 3 Search PubMed;
(g) T. Cundari, J. R. Schmidt, http://www.webmo.net;
(h) K. K. Baldridge and J. P. Greenberg, J. Mol. Graphics, 1995, 13, 63 CrossRef CAS.
Footnotes |
† A portion of this work was completed at UC-San Diego and is documented in the dissertation of T. J. Seiders 1999. |
‡ Electronic supplementary information (ESI) available: Synthesis, crystallographic methods and computational details. CCDC reference number 748565. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/b919616a |
|
This journal is © The Royal Society of Chemistry 2010 |
Click here to see how this site uses Cookies. View our privacy policy here.