Barbara
Nozière‡
*a and
Fabienne
Fache
b
aIRCELYON, CNRS, Université Claude Bernard Lyon 1, 2 Avenue Albert Einstein, 69626 Villeurbanne, France. E-mail: noziere@kth.se
bUniversité Lyon 1, CNRS, UMR 5246, Institut de Chimie et Biochimie Moléculaires et Supramoléculaires, 69626 Villeurbanne, France
First published on 27th July 2021
Until now the reactions of organic peroxy radicals (RO2) with alkenes in the gas phase have been essentially studied at high temperature (T ≥ 360 K) and in the context of combustion processes, while considered negligible in the Earth's atmosphere. In this work, the reactions of methyl-, 1-pentyl- and acetylperoxy radicals (CH3O2, C5H11O2, and CH3C(O)O2, respectively) with 2-methyl-2-butene, 2,3-dimethyl-2-butene and for the first time the atmospherically relevant isoprene, α-pinene, and limonene were studied at room temperature (298 ± 5 K). Monitoring directly the radicals with chemical ionization mass spectrometry led to rate coefficients larger than expected from previous combustion studies but following similar trends in terms of alkenes, with (in molecule−1 cm3 s−1) = 10−18 to 10−17 × 2/2 and = 10−14 to 10−13 × 5/5. While these reactions would be negligible for CH3O2 and aliphatic RO2 at room temperature, this might not be the case for acyl-, and perhaps hydroxy-, allyl- and other substituted RO2. Combining our results with the Structure–Activity Relationship (SAR) predicts kII(298 K) ∼10−14 molecule−1 cm3 s−1 for hydroxy- and allyl-RO2 from isoprene oxidation, potentially accounting for up to 14% of their sinks in biogenic-rich regions of the atmosphere and much more in laboratory studies.
RO2 can react with a wide range of chemical compounds, including unsaturated organic molecules, such as alkenes, forming the corresponding alkene epoxy as the main product (Scheme 1). Until now, these reactions have been essentially studied for their interest in combustion processes and, with a few exceptions, investigated experimentally at high temperature (T ≥ 360 K).7 Extrapolating these results suggest that these reactions are negligible at room temperature, and thus in the Earth's atmosphere. To our knowledge, they have never been considered in atmospheric chemistry.
Experimental values for the rate coefficients for these reactions, kII (molecule−1 cm3 s−1), are scarce, in particular for CH3O2 (ref. 8) and CH3C(O)O2.9 Ref. 7 summarizes these data and recommends expressions for kII(T), with T = 360–800 K, fitted to the experimental results. For most of the RO2 listed, extrapolating these expressions to 298 K leads to kII ≤ 10−19 molecule−1 cm3 s−1, thus justifying the omission of these reactions in atmospheric chemistry. But for some RO2 such as CH3C(O)O2, the rate coefficients are 5 to 6 orders of magnitude larger than for CH3O2, suggesting that these reactions might not be entirely negligible at room temperature. Extrapolating the expressions in ref. 7 also results in uncertainties on the rate coefficients at 298 K of about ×10/10 for CH3O2 and ×30/30 for CH3C(O)O2, further justifying experimental studies. Finally, as previous studies focused exclusively on combustion systems, atmospherically relevant biogenic alkenes such as isoprene or terpenes have never been investigated. To our knowledge, the reaction of RO2 with conjugated alkenes such as isoprene, prone to allylic rearrangement, has not been studied either. The reactions of RO2 with biogenic alkenes at room temperature are thus worth investigating as a potential sink for at least some RO2 in the atmosphere.
In this work, RO2 + alkene reactions were investigated experimentally for the methyl peroxy radical, CH3O2, 1-pentyl peroxy radical, hereafter referred to as C5H11O2, and peroxy acyl radical, CH3C(O)O2, with 2-methyl-2-butene, 2,3-dimethyl-butene, isoprene, α-pinene, and limonene at 298 ± 5 K.
Fig. 2 Typical experimental profiles and kinetic analysis for the reaction CH3O2 + isoprene (experiment Alk03 in Table S1†): (A) real-time evolution of CH3O2 concentration (red line, m/z = 84), isoprene (green line, m/z = 69) and production of isoprene epoxy (blue line, m/z = 121). The areas shaded in blue correspond to the periodic addition of isoprene; (B) corresponding first-order variation of the ratio as a function of isoprene concentration providing kII(298 K). |
The temperature and relative humidity inside the reactor were determined in separate sets of experiments, but under the same conditions of pressure, flow, and UV-light irradiation, by placing an infrared hygrometer (Extech 101) inside the reactor. The uncertainties of ±5 K attributed to the temperature include both the variabilities during the experiments and over the entire time span of the study.
The RO2 were produced photochemically by irradiating the reactor over the wavelengths 280–400 nm with four fluorescent lights (Philips TL12, 40 W). For CH3O2 and CH3C(O)O2, the radical was produced by photolyzing chlorine, Cl2, in the presence of an organic precursor (CH4, and CH3CHO, respectively) as in ref. 11. For CH3O2 the sequence was:
Cl2 + hν → 2Cl | (2) |
Cl + CH4 → CH3 + HCl | (3) |
CH3 + O2 + M → CH3O2 + M | (4) |
And for CH3C(O)O2:
Cl + CH3CHO → CH3C(O) + HCl | (5) |
CH3C(O) + O2 + M → CH3C(O)O2 + M | (6) |
Irradiation tests were performed and confirmed that CH3CHO was not photolyzed by the UV lights in the reactor and that its only fate was reaction.5
CH3O2 and C5H11O2 were also produced by photolyzing directly their iodinated precursors, CH3I and C5H11I, respectively, as in ref. 10. For CH3O2:
CH3l + hν → CH3 + I | (7) |
Followed by reaction.4 For C5H11O2:
C5H11I + hν → C5H11 + I | (8) |
C5H11 + O2 + M → C5H11O2 + M | (9) |
CH3O2 was produced from two different precursors, CH4 + Cl2 and CH3I, to rule out potential artefacts due to side-chemistry due to Cl2/Cl or I atoms. Table S1† in the ESI provides the range of concentrations used for the different precursors. Only a small fraction of Cl2 was photolyzed, leading to [Cl] in the range 1011 to 1012 molecule cm−3.12 In the systems using the photolysis of iodinated compounds, the number of radicals produced (thus of I atoms) was in the same range, based on the initial concentrations of RO2 observed in this and previous studies.10,11 In this study, the maximum RO2 concentrations in the reactor were in the range 5 × 1010 to 5 × 1011 molecule cm−3 for CH3O2, 1–2 × 1011 molecule cm−3 for C5H11O2, and 1–3 × 1010 molecule cm−3 for CH3C(O)O2.
Because the radicals studied had very different reactivities, different set-ups were used to study their reactions. CH3O2 was produced in the top half of the reactor (z ≤ 54 cm in Fig. 1) and reacted with alkenes in the dark in the lower half (z ≥ 56 cm), the alkenes being introduced at z = 56 cm (Fig. 1). This was not possible with C5H11O2 and CH3C(O)O2, as producing them in the top half of the reactor resulted in non-measurable concentrations at the bottom (z = 120 cm). These radicals were thus produced in the bottom half of the reactor, the alkenes being still introduced at z = 56 cm. Thus, for these radicals, photochemical production and reactions with alkenes occurred simultaneously in the lower half of the reactor. A separate series of experiments were performed and showed that the photolysis of RO2 in the reactor was negligible, as was that of the stable reaction products (peroxides and aldehydes).
To avoid potential artefacts due to varying flow rate or pressure in the reactor when injecting the alkenes, the total flow through the alkene inlet was maintained continuous throughout the experiments using a flow controller toggled between pure N2 and mixtures of alkenes in N2. The existence of potential artefacts due to insufficient mixing of the alkenes in the reactor was also examined for CH3O2 by varying the total flow rate through the alkene inlet from 5 to 200 sccm, while maintaining the same alkene concentrations (using different dilution factors). The same results were obtained with all flow rates, indicating that such mixing effects were negligible under these conditions.
A + H3O+(H2O)n → AH+(H2O)m + (n − m + 1)H2O | (10) |
A compound of molecular mass M was thus detected by its ion products at m/z = M + 1, M + 19, M + 37, M + 55, M + 73, etc. Previous studies have shown that a CIMS instrument operating on this principle can detect volatile RO2 in addition to stable molecules.10–12 As in our previous studies,10,11 the potential contribution of other compounds than RO2 at their expected m/z was investigated by adding an excess of NO in the reactor, before or after the series of RO2 + alkene experiments. These tests showed that less than 10% of the signals came from other compounds than RO2, which was attributed to impurities in the system. These constant contributions to the RO2 signals however cancelled out in the first-order kinetic analysis used in this work. In the presence of alkenes, the contribution of other compounds to the RO2m/z was not expected because the latter have even values while stable CxHyOz compounds have odd m/z values with proton transfer.
The CIMS allowed monitoring continuously, with a time resolution of ∼1 s, the evolution of RO2, alkenes, and stable reaction products as the alkenes were periodically added to the reactor (Fig. 2A). Table S3 of the ESI† gives the complete list of the ion masses at which these compounds were detected. Although knowing the absolute concentrations of RO2 in the reactor was not necessary for the first-order kinetic analysis in this work (cf. “Kinetic analysis” below), they were determined in order to constrain the simulations that were used to validate these analyses (see “Kinetic simulations” below). For this, the detection sensitivities determined for these radicals in previous studies were used: = 5000 Hz ppb−1,10,11 = 200 Hz ppb−1,10 and = 2000 Hz ppb−1.11
For each reaction investigated, the occurrence of the reaction was confirmed by observing both the decrease of the RO2 signal, SRO2, (thus of RO2 concentration) upon alkene addition and by the build-up of stable products at the expected ion masses for the alkene epoxy (Fig. 2A).
For radicals produced in the top half of the reactor and reacting in the dark in the bottom half (CH3O2 in this study), the maximum radical concentration, [RO2]i, is reached near mid-reactor (z ∼54 cm in Fig. 1), and then decreases as a result of second-order sinks (self-reaction) and first-order sinks (wall losses, reactions with HO2, potential isomerization… see Section S4 of the ESI† for the different RO2) to reach [RO2]o at z = 120 cm. Assuming that the second-order sinks are negligible, [RO2]i and [RO2]o are linked by a simple first-order expression:
(11) |
(12) |
(13a) |
(13b) |
The rate coefficient kII was then determined by applying eqn (13b) to the RO2 signals measured in the absence and in the presence of alkenes with the CIMS. Eqn (13b) is, however, only an approximation of the kinetics for CH3O2 because of the potential contributions of second-order sinks, and even more so for C5H11O2 and CH3C(O)O2 as these radicals were simultaneously produced and consumed in the reactor (Fig. 3 bottom). In addition, for all the radicals, the first-order sinks were not necessarily identical in the absence and in the presence of alkenes, as the concentrations of HO2 (and of CH3O2 in the CH3C(O)O2 system) varied. Thus, kinetic simulations were run (next section) to determine the correction factors to apply to eqn (13b) to determine kII in each series of experiments.
The correction factors for the reactions of CH3O2 were small (see below), implying only small uncertainties in the kinetic results, but larger for C5H11O2 and CH3C(O)O2, implying larger uncertainties. The uncertainties in the values of kII obtained from these analyses were thus estimated to be ×2/2, for CH3O2, mostly based on the statistical dispersion, and ×5/5 for the reactions of C5H11O2 and CH3C(O)O2 because of the larger uncertainties in the correction factors and of the limited range of alkene concentrations that could be used in these experiments.
The results showed that, for CH3O2 reactions, the correction factor was 0.76, mostly compensating for neglecting the self-reaction and for the differences in the first-order sinks in the absence and presence of alkenes. For the reactions of C5H11O2 and CH3C(O)O2, these factors were larger, ∼5 and ∼19, respectively, compensating for a number of contributions detailed in Section S4 of the ESI.†
E = 83.0–1.82 × ΔEc | (14) |
ΔEc = −(χRO2 − χalkene)2/4 × (ηRO2 − ηalkene) | (15) |
χ = (I + A)/2 | (16) |
η = (I − A)/2 | (17) |
The pre-exponential factor for the rate coefficients, Ao, used in these SAR calculations was the one recommended in ref. 7 and obtained from empirically fitting the combustion data: Ao = 2.09 × 10−13 molecule−1 cm3 s−1. The ionization energies, I, and electron affinities, A, used in these calculations and the values predicted for kII(298 K) are presented in Table 1.
I (eV) | A (eV) | χ (eV) | η (eV) | ΔEc (kJ mol−1) | E (kJ mol−1) | k II (298 K) molecule−1 cm3 s−1 | |
---|---|---|---|---|---|---|---|
a Ref. 14. b Ref. 15. c Ref. 13. d Based on cyclohexene in ref. 15 but corrected by −0.03 eV for each methyl group. e From ref. 15 but for two double bonds. f Ref. 16. g Ref. 7. | |||||||
2,3-Dimethyl-2-butene | 8.27a | −2.27b | 3.0 | 5.3 | |||
Limonene | 8.30c | −2.10d | 3.1 | 5.2 | |||
α-pinene | 8.07c | −2.10d | 3.2 | 5.3 | |||
2-Methyl-2-butene | 8.68a | −2.24b | 3.2 | 5.5 | |||
Isoprene | 8.86c | −2.80e | 3.0 | 5.8 | |||
CH3C(O)O2 | 11.58f | 2.75f | 7.2 | 4.4 | |||
CH3O2 | 11.18f | 1.21f | 6.2 | 5.0 | |||
i-C3H7O2 (H3C–CHO2–CH3) | 11.00g | 1.40g | 6.2 | 4.8 | |||
HOC3H6O2 (HOCH2–CHO2–CH3) | 11.86g | 2.02g | 6.4 | 4.4 | |||
C3H5O2 (H2CCH–CH2O2) | 11.14g | 1.60g | 6.4 | 4.8 | |||
CH3C(O)O2 + 2,3-dimethyl-2-butene | 43.2 | 4.39 | 3.6 × 10−14 | ||||
CH3C(O)O2 + limonene | 41.5 | 7.55 | 9.9 × 10−15 | ||||
CH3C(O)O2 + α-pinene | 39.0 | 11.95 | 1.7 × 10−15 | ||||
CH3C(O)O2 + 2-methyl-2-butene | 38.0 | 13.85 | 7.8 × 10−16 | ||||
CH3C(O)O2 + isoprene | 40.3 | 9.73 | 4.1 × 10−15 | ||||
CH3O2 + 2,3-dimethyl-2-butene | 24.0 | 39.31 | 2.7 × 10−20 | ||||
CH3O2 + limonene | 22.7 | 41.71 | 1.0 × 10−20 | ||||
CH3O2 + α-pinene | 21.0 | 44.71 | 3.0 × 10−21 | ||||
CH3O2 + 2-methyl-2-butene | 20.4 | 45.83 | 1.9 × 10−21 | ||||
CH3O2 + isoprene | 22.3 | 42.34 | 7.9 × 10−21 | ||||
i-C3H7O2 + 2,3-dimethyl-2-butene | 24.5 | 38.37 | 3.9 × 10−20 | ||||
HOC3H6O2 + 2,3-dimethyl-2-butene | 29.4 | 29.40 | 1.5 × 10−18 | ||||
C3H5O2 + 2,3-dimethyl-2-butene | 27.3 | 33.36 | 3.0 × 10−19 |
Fig. 4 clearly shows that the kII(298 K) obtained in this work is larger than expected from the combustion data, by about a factor 60 for CH3C(O)O2 and 100 to 300 for CH3O2, and by factors 20 and 250 to 1000, respectively, from the SAR predictions. In addition, while the present results indicate that CH3O2 reacts 18 times faster than HO2 (with 2,3-dimethyl-2-butene) the high-temperature data predicted it to react 6 times slower than HO2.
Besides these discrepancies, the rate coefficients obtained in this work followed similar trends to the high-temperature experimental data and SAR previsions in terms of alkene substitution and RO2 structure. In particular, for all the RO2, kII(298 K) increased with alkene substitution, including for the alkenes studied here for the first time, in the sequence isoprene < 2-methyl-2-butene < α-pinene < limonene < 2,3-dimethyl-2-butene. As explained in ref. 7 for an electrophilic addition of a RO2 radical onto a double bond the activation energy, E, is expected to vary proportionally with the alkene ionization energy, which is implicit in eqn (14)–(17). In this work, kII was indeed found to increase with alkene ionization energies (Table 1): isoprene, 8.86;13 2-methyl-2-butene, 8.68;7 limonene, 8.30;13 2,3-dimethyl-2-butene, 8.27.7 Only for α-pinene the ionization energy of 8.07 eV13 found in the literature did not seem consistent with that of the similar molecule limonene. α-pinene was thus arbitrarily assigned an ionization energy of 8.5 eV in Fig. 4 and in the SAR calculations. With this, linear regressions (on the ln scale) were performed on the results, but excluding the data for isoprene (see discussion below).
These linear regressions (dashed lines in Fig. 4) allowed the estimation of kII(298 K) for reactions that had not been studied. For instance, kII(298 K) for CH3C(O)O2 + terpenes was estimated to be in the range 0.5–1 × 10−13 molecule−1 cm3 s−1 (blue line in Fig. 4).
Leaving out the RO2 + isoprene data from the linear regressions revealed that the kII(298 K) for these reactions was systematically larger than the regressions (Fig. 4). These deviations corresponded to a factor 2.8 in average, thus providing an estimate for the excess reactivity due to allylic rearrangement in the RO2 + isoprene reactions.
As explained in ref. 7 and implicit in the SAR calculations, kII for RO2 + alkene also varies strongly with the RO2 structure. In the present work, for the same alkene, CH3C(O)O2 reacts 9000 to 18000 times faster than CH3O2, while the combustion data predicted a ratio of 36000 between these radicals with 2-methyl-2-butene. The SAR predicted even larger ratios, between 400000 and 1000000, but the large discrepancies with the experimental data are likely due to the empirical determination of the preexponential factors.
The rate coefficients measured for C5H11O2 in this work indicate that this radical reacts about 14 times faster than CH3O2 in average. This seems reasonable as the rate coefficients for other radicals (for instance i-C3H7O2 in Table 1) indicate that kII increases only by a small factor for each additional carbon atom. However, as no other experimental data were available for this radical and its ionization energy and electron affinity were not available, no further comparison could be made with these rate coefficients.
The large discrepancies between the rate coefficients obtained in this work and those reported at high temperature7–9 seem difficult to reconcile, suggesting experimental or analytical artefacts in at least one of the data sets. In the present work, monitoring directly RO2 with only minor potential interference from other compounds should be more selective than monitoring the overall epoxide formation in previous studies.8,9 And using a relative kinetic approach (“alkene off”/”alkene on”) should limit the artefacts in the results by cancelling out a large part of the RO2 sinks other than alkenes. The potential role of side-reactions involving OH radicals or Cl atoms was also investigated and ruled out by performing kinetic simulations (Section S4 of the ESI†). This was further confirmed by the fact that large discrepancies with the high-temperature results were obtained in this work with all types of precursors (Cl2, iodinated compounds) and set-ups. One potential artefact that could account for the large rate coefficients in this work would be insufficient mixing, leading to large underestimations of the alkene concentrations. But, besides the fact that such mixing effects were ruled out by varying the total alkene flow rate (Experimental section), they should affect equally all the rate coefficients, while the discrepancies with the high-temperature data are much larger for CH3O2 than for CH3C(O)O2 reactions (by almost a factor of 5). As a further confirmation, the kinetic simulations showed that such large alkene concentrations would entirely consume RO2, making it impossible to observe profiles such as that in Fig. 2B. While no obvious artefact accounting for the large discrepancies with the high-temperature data can be found in our work, identifying such an artefact in these previous studies8,9 is not easy, especially as little information was provided on their kinetic analysis. In these previous studies, the rate coefficients were determined from the overall formation of the epoxy product. Thus, underestimating the contribution of HO2 to this formation or overestimating the RO2 concentrations, for instance by overlooking side-reactions, could have potentially underestimated the RO2 + alkene rate coefficients.
The SAR, ionization energies and electron affinities in ref. 7 were also used to estimate the rate coefficients with 2,3-dimethyl-2-butene at 298 K for other RO2 than those studied experimentally: isopropylperoxy, i-C3H7O2 or H3C–CH2O2–CH3, 1-hydroxy-2-propylperoxy, HOC3H6O2 or HOCH2–CHO2–CH3, and allylperoxy, C3H5O2 or H2CCH2–CH2O2. The ionization energies, electron affinities, and results for these radicals are presented in Table 1. They show that, at 298 K, HOC3H6O2 reacts about 40 times faster than its aliphatic analogue i-C3H6O2. Allylperoxy, C3H5O2, was predicted to react about 8 times faster than i-C3H6O2, which was assumed to be a typical factor for allyl-substituents, in the absence of ionization energies and electron affinities allowing a comparison with the primary aliphatic analogue 1-C3H6O2. Some RO2 produced by the OH oxidation of isoprene contains both HO- and allyl-substituents, and thus their rate coefficients with alkenes might combine the above factors and be significant at room temperature. The rate coefficient with 2,3-dimethyl-2-butene for such C5-RO2 can be roughly estimated from that of 1-C5H11O2 measured in this work, kII ∼1.5 × 10−16 molecule−1 cm3 s−1, and the factors × 40 and × 8 for the HO- and allyl substituents, leading to 5 × 10−14 molecule−1 cm3 s−1. This estimate has for only purpose to make a first assessment of the importance of these reactions in the laboratory and in the atmosphere, and would obviously need to be confirmed by experimental studies.
While these estimates await confirmation from further experimental studies, the importance of these reactions in the atmosphere and laboratory for the RO2 produced by the OH-oxidation of isoprene can be determined from the rate coefficient estimated above. Assuming kII (RO2 + isoprene) ∼1/5 × kII (RO2 + 2,3-dimethyl-2-butene) = 10−14 molecule−1 cm3 s−1 and typical isoprene concentrations of 1012 molecule cm−3 in the laboratory or smog chamber would correspond to RO2 sinks of 0.01 s−1. Note that, while some of these RO2 radicals would rapidly undergo H-migration reactions,3,18 their HOOQO2 isomers would also carry HO- and allyl-groups, and thus have similar rate coefficients to alkenes. In the absence of NO, the main other sink for the RO2 would be their reactions with HO2. Typical HO2 concentrations of 109 molecule cm−3 and a rate coefficient of 10−11 molecule−1 cm3 s−1 also correspond to a sink of 0.01 s−1, implying that the reactions with isoprene could represent as much as half of the RO2 sinks under such conditions. If so, they should lead to measurable concentrations of isoprene epoxy, which might have been overlooked or mis-attributed in previous isoprene oxidation studies.19 In the atmosphere, the concentrations reported (for instance in ref. 1) in vegetation-impacted regions, isoprene = 5 × 1010; NO = 5 × 108; HO2 = 108 molecule cm−3, correspond to sinks for isoprene-RO2 (and HOOQO2) of 0.0005, 0.002, and 0.001 s−1, respectively. Reactions with isoprene could thus represent as much as 14% of the sinks for these RO2 radicals, to which their reactions with methacrolein and methyl vinyl ketone would probably have to be added. Thus, for some RO2, RO2 + alkene reactions might not be negligible even in the atmosphere, which emphasizes the need for further experimental investigations at room temperature.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/d1sc02263f |
‡ Now at KTH, Royal Institute of Technology, Teknikringen 30, 114 28 Stockholm, Sweden. |
This journal is © The Royal Society of Chemistry 2021 |