Yury V.
Torubaev
*a,
Ivan V.
Skabitskiy
a,
Polina
Rusina
b,
Alexander A.
Pasynskii
a,
Dhirendra K.
Rai
c and
Ajeet
Singh
d
aN.S. Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, GSP-1, Leninsky Prospect, 31, 119991 Moscow, Russia. E-mail: torubaev@igic.ras.ru
bDepartment of Chemistry, Moscow State University, Russia
cDiscipline of Metallurgy Engineering and Materials Science, Indian Institute of Technology, Indore, India
dDiscipline of Chemistry, Indian Institute of Technology, Indore, India
First published on 28th February 2018
Iron cyclopentadienyl carbonyl-halide and -chalcogenolate complexes CpFe(CO)2X (X = Cl, Br, I, TePh, SPh) readily afford cocrystals with the bidentate halogen bond donor 1,4-diiodotetrafluorobenzene (p-DITFB) under slow evaporation or vapor diffusion conditions. The same microcrystalline [CpFe(CO)2TePh](p-DITFB) product instantly precipitates upon mixing p-DITFB and CpFe(CO)2TePh in hexane solution. Supramolecular [CpFe(CO)2X(p-DITFB)]n chains in the cocrystals are assembled by halogen bonds (XB) between the electrophilic area of iodine atoms of p-DITFB and the nucleophilic area of X in CpFe(CO)nX. The 5–10 cm−1 hypsochromic shift of the CO stretching bands in the IR spectra of [CpFe(CO)2X(p-DITFB)] cocrystals is explained by the pronounced electron-withdrawing effect of halogen bonding (XB), as supported by DFT calculations. The observed influence of the nature of the XB acceptor (X) on the XB geometry is described in terms of hybridization and electrostatic surface potential (ESP) mapping.
The formation of the L → M bond results in the strengthening of the X–N halogen bond in M ← Py–X–NH3 (M = Zn, Ag, Co) model systems.7 However, the M → L back-donation may produce the opposite effect and therefore the L → M and M → L interplay deserves special attention in the case of halogen-bonded X–L–M systems.
A comparison of electrostatic surface potential (ESP) maps of halogen atoms linked to electron-withdrawing organic groups with those of metal-bonded halide ligands8 shows the latter to have XB-acceptor character in their p-belt area, and at best a weak XB-donating apical area. The shape of a ligand L p-belt depends upon its anionic character and the extent of mixing of its p- and s-orbitals. Therefore, additional control over the directionality of XB may be achieved through the degree of XB-acceptor hybridization.
Spectroscopic studies including IR, 19F, 15N and 13C NMR, in solution and in the solid phase, are effective in identifying the XB and quantifying its energy.9–12 IR spectroscopy data for Lewis bases in dilute solution, in the presence of iodoethynyl R–CC–I XB donors, gives a good correlation between the association constant (Ka) and Hammett parameter (σpara) for diverse substituents R.13 Using IR spectroscopy, it has also been shown that hydrogen bonding (HB) between a halide and the OH group of CpMn(CO)2(hydroxypyridine) induces a redshift of the ν(CO) bands (max. 12 cm−1) owing to the electron donation from the halide anion via a HB–ligand–metal–CO chain.14 In contrast, the electron-withdrawing effect of an I2 molecule on the iodido ligand in [(Me5C5)Fe(CO)2I–I2–IFe(CO)2(Me5C5)] leads to a 7 cm−1 blueshift of the ν(CO) bands with respect to (Me5C5)Fe(CO)2I.15
As the shift of the ν(CO) band(s) of metal carbonyls is known to be a sensitive probe for the changes in the electron density at the metal centre, we were interested in investigating the halogen-bonded complexes formed from halide- or organochalcogenolate-substituted metal carbonyls (XB acceptor) and a typical XB donor (p-DITFB). For this purpose, we have assembled organometallic halides and organochalcogenides with p-DITFB in a series of novel cocrystals and studied their crystal and electronic structures by means of XRD methods, IR spectroscopy and DFT calculations.
Fig. 1 Unsymmetrical hypsochromic broadening (ca. ∼4 cm−1 half-width) of the ν(CO) band at 2019 cm−1 as a result of gradual addition of p-DITFB to a 0.025 mmol cyclohexane solution of CpFe(CO)2TePh. |
To investigate the possible influence of direct attractive interactions between p-DITFB and carbonyl groups, we simulated the IR spectra of the I–CO-bonded CpFe(CO)2TePh–p-DITFB adduct (optimized in the gas phase) and found a redshift of the ν(CO) band (see the ESI†). Moreover, the IR-monitored titration of its halogen-free analog CpMn(CO)3 against p-DITFB under the same conditions also showed a slight bathochromic broadening of the ν(CO) bands (see Table S1_es of the ESI†). From these studies, it is clear that a direct I–CO interaction can only redshift the ν(CO) band or reduce its blueshift. The complex interplay between these two opposite effects may be partly responsible for the absence of a clear correlation between the nature of X and the CO blueshift values.
The powder XRD pattern of the CpFe(CO)2TePh/p-DITFB green precipitate from the hexane solution matched well with the simulated powder XRD pattern17 (see Fig. S3_es in the ESI†) based on single crystal XRD data for the dark-green P21/c cocrystals 1 prepared by slow vapor diffusion in CpFe(CO)2TePh–p-DITFB 1:1 mixtures in DCM/hexane (see Fig. 1).
Although the C–O distances in the carbonyl ligands of 1 (1.140(3)–1.146(3) Å) are not significantly different from those in the parent CpFe(CO)2TePh (1.140(6)–1.145(4) Å), the ν(CO) frequencies in the FTIR-ATR spectrum of 1 are blueshifted (4 cm−1) with respect to the parent CpFe(CO)2TePh and match well with those of the green precipitate resulting from the interaction of CpFe(CO)2TePh with p-DITFB in hexane (see Table 1). The crystal structure of 1 is revealed to be of type II, having a genuine I–Te halogen bond with a distance of 3.4863(2) Å which is 0.5 Å shorter than the sum of the corresponding van der Waals (vdW) radii. The trimolecular (CpFe(CO)2TePh)2(μ2-DITFB) assemblies are linked by Te–I chalcogen bonds at a distance of 4.2059(2) Å, which is close to the sum of the Te–I vdW radii (see Fig. 2).
Parent complex, ν, cm−1 | Cocrystal with DITFB, ν, cm−1 | Shift, cm−1 | ||
---|---|---|---|---|
a Cocrystals obtained by vapor diffusion (see the Experimental section for details). b Precipitate from cyclo-hexane solution. c Precipitate from n-hexane solution. | ||||
1 | CpFe(CO)2TePh | 2007, 1993, 1936 | 2013, 1993, 1941a | 4–6, 0, 4–5 |
2011, 1993, 1940b | ||||
3 | CpFe(CO)2Cl | 2048, 1990 | 2048, 2003 | 0, 13 |
4 | CpFe(CO)2Br | 2035, 1984 | 2044, 1990 | 9, 5 |
5 | CpFe(CO)2I | 2026, 1966, 1946 | 2032, 1982, 1962 | 6, 16, 16 |
6 | CbCo(CO)2I | 2040, 1992 | 2049, 2003a | 9, 11 |
2047, 2001b | ||||
2047, 2002c |
Fig. 2 Crystal structure diagram of 1, showing the I–Te halogen-bonded trimolecular assemblies (CpFe(CO)2TePh)2(μ2-DITFB) and the Te–I chalcogen interactions between them. Hydrogen atoms are omitted for clarity. Selected distances (Å): I(1)–Te(1), 3.4863(2); Te(1)–Fe(1), 2.5934(3); Te(1)–I(1), 4.2059(2). Selected angles (°): I(1)–Te(1)–I(1), 90.55(1); Fe(1)–Te(1)–I(1), 108.64(1); Fe(1)–Te(1)–I(1), 95.17(1); Fe(1)–Te(1)–C(8), 102.16(6); Te(1)–I(1)–C(14), 169.71(6). Dotted lines link Te and I atoms at distances shorter than the sum of Te–I vdW radii.18 |
It should be noted that the parent CpFe(CO)2TePh crystal exhibits significant static positional disorder with Te–Fe distances of 2.538–2.617 Å and a disordered Cp ring,19 while in 1, the CpFe(CO)2TePh molecules are perfectly ordered leading to a well-defined Te–Fe distance of 2.5934(3) Å (see Fig. 3). Apparently, cocrystallization with an “innocent” XB (or other secondary bonded) counterpart can, in some cases, be an instrument to “fix” disordered structures.
Fig. 3 The disorder of CpFe(CO)2TePh molecules in a parent crystal (LADWOE19) is “fixed” by two p-DITFB molecules in cocrystal 1. |
Using the same vapor diffusion technique, which offers the advantage of growing crystals under an inert atmosphere, we prepared the following cocrystals of p-DITFB with μ2-SPh, halides (Cl, Br, I) and (tetramethylcyclobutadiene)cobalt(dicarbonyl)iodide [CbCo(CO)2I], which are congeners of CpFe(CO)2TePh: [CpFe(CO)(SPh)]2–DITFB (2), CpFe(CO)2Cl–DITFB (3), CpFe(CO)2Br–DITFB (4), CpFe(CO)2I–DITFB (5) and CbCo(CO)2I–DITFB (6) (see Fig. 4–8, respectively). The interatomic distances in the cyclodienyl–metal–carbonyl moieties in complexes 1–6 are equal or close to those in their parent structures.
Fig. 4 Crystal structure diagram of 2, showing its I–S halogen-bonded trimolecular assemblies ([CpFe(CO)(μ2-SPh)]2)2(μ2-DITFB). Hydrogen atoms are omitted for clarity. Selected distances (Å): I(1)–S(2), 3.130(1). Selected angles (°): C(1F)–I(1)–S(2), 173.9(1); Fe(1)–S(2)–I(1), 111.91(4); I(1)–S(2)–C(17), 102.5(1); I(1)–S(2)–Fe(2), 118.86(4). Dotted lines link S and I atoms at a distance shorter than the sum of the S–I vdW radii.18 |
Fig. 5 Crystal structure diagram of 3, showing a fragment of I–Cl halogen-bonded polymeric chains ([CpFe(CO)2Cl](μ2-DITFB))n. Hydrogen atoms are omitted for clarity. Selected distances (Å): Fe(1)–Cl(1), 2.318(3); Cl(1)–I(1), 3.219(5); Cl(1)–I(2), 3.229(5). Selected angles (°): I(2)–Cl(1)–I(1), 141.48(3); Fe(1)–Cl(1)–I(1), 110.02(4); Fe(1)–Cl(1)–I(2), 108.33(4); Cl(1)–I(2)–C(11), 173.4(1); Cl(1)–I(1)–C(8), 175.8(1). Dotted lines link Cl and I atoms at distances shorter than the sum of Cl–I vdW radii.18 |
Fig. 6 Crystal structure diagram of 4, showing a fragment of I–Br halogen-bonded polymeric chains ([CpFe(CO)2Br](μ2-DITFB))n. Hydrogen atoms are omitted for clarity. Selected distances (Å): Fe(1)–Br(1), 2.4195(5); Br(1)–I(2), 3.2943(4); Br(1)–I(1), 3.3111(4). Selected angles (°): I(2)–Br(1)–I(1), 142.76(1); C(8)–I(1)–Br(1), 172.02(8); Fe(1)–Br(1)–I(1), 107.61(1); Fe(1)–Br(1)–I(2), 109.22(1). Dotted lines link Br and I atoms at a distance shorter than the sum of the Br–I vdW radii.18 |
Fig. 7 Crystal structure diagram of 5, showing its I–I halogen-bonded trimolecular assemblies (CpFe(CO)2I)2(μ2-DITFB). Hydrogen atoms are omitted for clarity. Selected distances (Å): Fe(1)–I(1), 2.6025(4); I(1)–I(2), 3.5488(3). Selected angles (°): Fe(1)–I(1)–I(2), 89.06(1); C(8)–I(2)–I(1), 175.50(7). Dotted lines link I atoms at a distance shorter than the sum of I–I vdW radii.18 |
Fig. 8 a) Crystal structure diagram of 6, showing a fragment of I–I halogen-bonded polymeric chains ([Cb*Co(CO)2I](μ2-DITFB))n linked by I–π(η4-Me4C4) interactions. Hydrogen atoms are omitted for clarity. Selected distances (Å): intramolecular Co(1)–I(1), 2.619(1); intermolecular I(3)–I(1), 3.589(1); I(1)–I(2), 3.585(1); I(1)–C(3–6) ring of the η4 = Me4C4 ligand, 3.781(7)–3.866(7). Selected angles (°): I(3)–I(1)–I(2), 171.51(2); Co(1)–I(1)–I(3), 93.00(2); Co(1)–I(1)–I(2), 95.16(2); C(14)–I(3)–I(1), 169.6(2); C(11)–I(2)–I(1), 177.2(2). b) Comparison of the Cb*Co(CO)2I stacks in 6 with those in the parent crystal. Selected distances (Å): intermolecular I(2)–C(4), 3.725(8); I(2)–C(3), 3.87(1); I(1)–C(13), 3.842(9), and similarities of the intramolecular distances Co(2)–I(2), 2.598(1); Co(1)–C(2), 1.781(7); C(2)–O(2), 1.157(9); Co(1)–C(1), 1.79(1); C(1)–O(1), 1.16(1). Dotted lines link specific atoms at a distance shorter than the sum of their vdW radii.18 |
The solid-state FTIR-ATR data for their ν(CO) frequencies (see Table 1) demonstrate the general blueshift, ranging from 5 to 16 cm−1 when compared to the parent LM(CO)2X crystals. The hypsochromic shift in 5 is also in agreement with the 7 cm−1 blueshift registered in the IR spectrum of the charge transfer complex (Me5C5)Fe(CO)2I–I2 (1965, 2014 cm−1) compared to the parent complex (η5-Me5C5)Fe(CO)2I (1957, 2007 cm−1).15 It is noteworthy that this 7 cm−1 blueshift can be correctly reproduced by the same computational method as used for the evaluation of the ν(CO) blueshift in our complexes 1, 3, and 5 (see the ESI†).
Electron donation from ligand X of LM(CO)2X to the iodine of p-DITFB appears sufficient to withdraw electron density in the X → M bond and reduce M → CO back-bonding.20 This results in a decrease of the occupancy of the π*C–O LUMO and, therefore, a slightly stronger CO bond.
The solid-state structures of cocrystals 1–6 (see Fig. 4–8) are stabilized by short contacts between the halide ligand X of CpFe(CO)2X (X = Cl, Br, I) and the iodine atoms of the ditopic XB acceptor (p-DITFB). The dependence of the I–X–Fe angle on the nature of X is a remarkable illustration of the directionality of XBs.
NBO/PBE0 calculations for [CpFe(CO)2X](p-DITFB) (X = Cl, I, TePh) adducts demonstrate the dominant contribution from the unhybridized apical p-electron pair of iodine in DITFB (see Tables 1 and S1†_es) and p-electrons of the ligand X p-belt. The relative contribution of XB acceptor orbitals to X–I XB and their hybridization do not show much dependence on the nature of ligand X.
The geometry of a pure p-orbital implies certain demands for the XB geometry, thus providing the XB directionality, which was reproduced in our DFT simulation and is visualized in the ESP maps (see Fig. 9).
Fig. 9 Electrostatic surface potential (ESP) maps for free parent molecules CpFe(CO)2I (a), CpFe(CO)2TePh (b) and CpFe(CO)2Cl (c) showing the nucleophilic areas at the iodine, tellurium and chlorine atoms, respectively. Note that the spherical potential distribution at the Cl ligand in CpFe(CO)2Cl does not dictate specific directionality of I–Cl XB (a), while unhybridized 5p orbitals of Te (b) and I (c)21 direct the X–I XB at the right angle to Fe–TePh and Fe–I bonds. |
ESP mapping for CpFe(CO)2I (Fig. 9a) shows the nucleophilic area at the specific equatorial “belt” of the iodine ligand, which is orthogonal to the Fe–I bond and has two distinct maxima matching with the p-orbital as well as with the “docking” sites for XB with electrophilic iodine functions of p-DITFB. One of the equatorial p-orbitals of the Te atom in the TePh ligand of complex CpFe(CO)2TePh is involved in covalent bonding with a carbon atom of the Ph group and therefore Te is left with only one XB-suitable p-orbital, resulting in two clearly visible spots on the ESP map (Fig. 9b) and directing the XB bonding with electrophilic iodine functions of p-DITFB in line with the x-axis, as suggested by the symmetry of the p orbital of Te. The more anionic, and therefore having more isotropic ESP, chloride ligand in CpFe(CO)2Cl does not reveal specific nucleophilic areas, which makes XB bonding more electrostatic and therefore less angular demanding, so that the electrophilic iodines of p-DITFB may exist at angles exceeding 90° (see Fig. 9c).
This increasing directionality of XB bonding in the sequence Cl > Br > I can be an additional reason for the low affinity of the iodine ligand in a sterically crowded (2,6-bis[(di-t-butylphosphino)methyl]phenyl)–Pd–I complex toward its interaction with DITFB and I(CF2)8I XB donors, noted in ref. 6. As shown in Fig. 10, the tert-butyl groups of a 2,6-bis[(di-t-butylphosphino)methyl]phenyl pincer provide efficient shielding of the 5p equatorial “belt” of iodine (which is perpendicular to the Pd–I bond) but allow space for the interaction with the more isotropic and less directionally demanding “sphere” of the Cl ligand.
Fig. 10 The tert-butyl fragment of a (2,6-bis[(di-t-butylphosphino)methyl]phenyl)PdX (ref. 6) (X = Cl (a) and I (b)) complex is shown as a space filling model to demonstrate the shielding of the 5p equatorial “belt” of the iodide ligand (b), as compared to the spherical chloride “anion” (a), escaping the shield. |
We can describe the packing patterns of 3 and 4 as isotypically packed zigzag chains, where the X ligand (Cl, Br) accommodates two p-DITFB molecules, with an average I–X–I angle of 140°, while their TePh, μ2-SPh and iodo congeners 1, 2 and 5 are associated into trimolecular units (CpFe(CO)nX)2(μ2-DITFB). In contrast, iodide 6 forms polymeric chains [(Cb*Co(CO)2I)(μ2-DITFB)]n, with a nearly linear IDITFB–IM–IDITFB angle (see Fig. 2–8).
Finally, it is worth noting that the same phases 1–6 are formed irrespective of the ratio of the starting reagents. With respect to the competition between XB and hydrogen bonding (HB),22 we should also mention that under similar conditions, no supramolecular assembly was observed when 1,4-hydroquinone (a HB donor) was used instead of 1,4-DITFB as a counterpart to the CpFe(CO)2X acceptor.
IR spectra were recorded on a Bruker Alpha FTIR spectrometer equipped with an ATR facility (for solid samples) and a 0.1 mm CaF2 cell for hexane and cyclohexane solutions.
A Bruker APEX II CCD area detector diffractometer equipped with a graphite-monochromated Mo Kα radiation source (0.71070 Å) was used for cell determination and intensity data collection for compounds 1–6. The structure was solved by direct methods and refined by full-matrix least squares against F2 using SHELXL-97 and Olex2 software.27,28 Non-hydrogen atoms were refined with anisotropic thermal parameters. All hydrogen atoms were geometrically fixed and refined using a riding model. Atomic coordinates and other structural parameters of 1–7 have been deposited with the Cambridge Crystallographic Data Centre (CCDC no. 1587662 (1), 1587659 (2), 1587660 (3), 1587664 (4), 1587663 (5), 1587661 (6), and 1587665 (7)).
Footnote |
† Electronic supplementary information (ESI) available. CCDC 1587659–1587665. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c7ce02185b |
This journal is © The Royal Society of Chemistry 2018 |