Chih-Tsung Yanga,
Yuli Wangb,
Curtis W. Frank*c and
Ying-Chih Chang*a
aGenomics Research Center, Academia Sinica, 128 Sec. 2, Academic Rd., Taipei, Taiwan. E-mail: yingchih@gate.sinica.edu.tw
bDepartment of Chemistry, University of North Carolina, Chapel Hill, NC 27599, USA
cDepartment of Chemical Engineering, Stanford University, Stanford, CA 94305, USA
First published on 5th October 2015
Surface-tethered chemoresponsive polypeptides prepared by surface-initiated vapor deposition polymerization (SI-VDP) were used to investigate the conversion efficiency between α-helical and β-sheet conformations of poly(γ-methyl-L-glutamate) (PMLG) homopolypeptide and PMLG-b-poly(β-benzyl-L-glutamate) (PBLG) copolypeptide brushes. The end-grafted PMLG brush predominantly adopted a β-sheet conformation after exposure to formic acid vapor, and it was converted back to a predominantly α-helical conformation after treatment with a mixture of dichloroacetic acid (DCA) and chloroform (CHCl3). This conformational inter-conversion process was reversible and repeatable for a number of cycles. Factors that affected the conversion efficiency between α-helix and β-sheet were studied, including PMLG chain mobility, concentration of DCA, and temperature of formic acid vapor. For end-grafted PMLG brushes with one end chain restriction, 60% conversion efficiency from α to β was achieved with 40 °C formic acid vapor treatment for 2 days, while for the PMLG in end-grafted PMLG-b-PBLG brushes, 40% conversion was achieved after 9 days, which was slower than end-grafted PMLG brushes due to the additional chain restriction from the PBLG block. In comparison, in spin-coated PMLG films in which the PMLG chains had no end chain restrictions, 80% conversion was achieved within 2 days in the same condition. The effects of solvent on the morphologies of surface-grafted PMLG brushes were also observed. The changes of the properties of these films, including surface wettability, thickness, and surface morphologies, were characterized by contact angle measurement, ellipsometry, and atomic force microscopy, respectively.
To simplify the system, we started with poly(γ-methyl-L-glutamate) (PMLG) and PMLG-b-poly(β-benzyl-L-glutamate) (PBLG) polypeptides as model compounds and studied their secondary structure transformation on solid substrates. In the polyglutamates (PG) family, the side chain structures of PBLG and PMLG differ by a benzyl group; PBLG has the greatest rigidity and α-helical stability, while PMLG has the least.20–22 Many attempts have been made to alter the secondary conformation of PBLG and PMLG in films through exposure to various solvents, with the objective of modifying the surface properties such as the packing density, viscosity, mechanical strength, or surface energy.23–26 The conformation of PBLG film is not affected by the chosen solvents. In contrast, the predominant conformation of PMLG at the air–water interface or in solid film was determined by the particular solvent used to form the sample.27 For example, the α-helical conformation predominates in PMLG when helicogenic solvents such as CHCl3, dimethyl formamide (DMF), or DCA/CHCl3 (v/v = 1:
9) is applied. However, the β-sheet conformation predominates when a pyridine-rich solvent, such as trifluoroacetic acid (TFA) or formic acid, is used.24,28–32 Besides, the non-peptide oligomer blending was employed to investigate the secondary conformations of PBLG and PMLG. It was found that α-helical conformation is greatly influenced by the side chain rigidity of polypeptides as well as the intermolecular hydrogen bonding induced by the blending oligomer.33
Although these early studies successfully demonstrated the influence of the solvent on the resulting film conformation, it is difficult to determine whether such treatments are reversible when films of polypeptides are physically adsorbed on the substrate, because vigorous chemical post-treatment on films can easily cause films detachment from the substrate. To counteract the issue of detachment, Wieringa et al.34–36 utilized a surface-grafting technique in DMF to fabricate PMLG and PBLG-b-PMLG block copolypeptides, and studied the helical orientation of these polypeptides with respect to the substrate. However, a prolonged reaction time was required to achieve an equivalent film thickness (24 h, 40 nm) of PMLG as compared with our case (1 h, 40 nm). In addition, due to the β-sheet aggregates are formed during the ROP in the solution phase a confined space for the control of β-sheet secondary conformation is in demand.37 Recently, PMLG thin film was fabricated as a field effect transistor gate dielectric because of its highly ordered structure and ferroelectric characteristics.38 Additionally, the piezoelectricity can be significantly enhanced by α-helical conformation in PMLG/poly(vinylidene fluoride) composite fibers, suggesting that the materials properties can also be greatly influenced by the secondary structures of polypeptides.39
In this work, our strategy for studying the secondary structure transformation behavior of the polypeptide film was to synthesize polypeptides that were chemically grafted onto a selected substrate. Because of the covalent bond between the polypeptide and the substrate, we could then treat the polypeptide film with a greater variety of chemistries than we could with unbounded films, without running the risk of dissolving the polypeptides from the surface. PMLG was used as a model synthetic polypeptide in this study, and was synthesized with surface-initiated vapor deposition polymerization (SI-VDP).40 We analyzed the ability of the surface grafted PMLG brushes to undergo chain conformations based on exposure to helicogenic and sheet-supporting solvents, as has been shown with spin-coated PMLG films.32 In particular, we demonstrate that end-grafted PMLG brushes can undergo reversible transformation between α-helical conformation and β-sheet without severe film depletion, and we analyze the effects of temperature and solvent concentration on these conversions. This work could eventually lead to the development of an in vitro assay to help solve existing biological questions as well as establishing a new class of “smart”, stimuli-responsive thin film materials.
A spin-coated PMLG film was also prepared for comparison. A dilute solution of PMLG (Sigma, molecular weight 10000–50
000) in CHCl3 was spin-coated onto the silicon substrate at 3000 rpm for 30 s. The thickness of the film depended on the concentration of the solution. In this study, 48 nm PMLG-coated films were prepared.
To study the effects of formic acid in the vapor phase (denoted by “υ”) on both spin-coated films and grafted brushes, we placed 48 nm-thick PMLG spin-coated films and 40 nm-thick PMLG grafted brushes in a sealed Petri dish, as shown in previous work.32 The films were taken out of the Petri dish after each reaction condition and then quickly dried overnight in vacuo at room temperature before we examined their conformational changes by ex situ atomic force microscopy (AFM) as well as FTIR and CD spectroscopy.
CD spectroscopy (JASCO J-60 spectropolarimeter) was used to examine the conformations of surface-grafted polypeptides on quartz substrates. The spectra were recorded at a bandwidth of 1 nm and a scanning rate of 20 nm min−1. A typical right-handed α-helix conformation is indicated by two negative bands at 208 nm and 222 nm. A positive absorption at 198 nm and a negative band at 217 nm represent the β-sheet structure.
The ellipsometric measurements were performed with a Rudolph Research-IV Auto EL ellipsometer at λ = 632.8 Å and an angle of incidence of 70°. Five different spots were measured and averaged for each test. Water contact angles were determined with a OCA-15 PLUS goniometer (Future Digital Scientific Corp.) with a water droplet (3.0 μL). All the measurements were performed five times, and the average values with standard deviations were obtained.
Surface morphologies of PMLG brushes were observed by AFM (Asylum Research, MFP-3D) performed in tapping mode. Cantilevers with a spring constant of 10–130 N m−1 (NanosensorsTM SSS-NCHR-20) were used for measurement at 25 °C in air. Topography, amplitude and phase images were simultaneously obtained.
While there were similarities between the spin-coated PMLG films and the PMLG brushes, there were some important differences. For example, while most of the spin-coated PMLG was transformed from the α-helix conformation to the β-sheet conformations by the formic acid (υ) treatment, a relatively larger fraction of the PMLG brushes remained in the α-helical conformation, as evidenced by the smaller peaks at 1652 cm−1 and 1547 cm−1 in the FTIR spectrum of the PMLG brushes after treating with formic acid (υ). A computer-generated peak deconvolution of the FTIR spectra of PMLG brushes, using a mixture of Gaussian and Lorentz fits based on the shifts of amide I and the definition of α-helix content, was obtained by taking the ratio of the peak areas at 1652 cm−1.43 We determined the change of α-helix content of films with the time of formic acid (υ) treatment as shown in Fig. 2. The α-helix content of the spin-coated PMLG decreased from 90% to less than 20% within 5 h of formic acid (υ) treatment at 60 °C (Fig. 2A), and the α-helix content of the PMLG brushes slowly decreased over a period of 25 h under formic acid (υ) treatment and stabilized at ∼40% helical content. The reversible conversion of the β-sheet PMLG brushes back to the α-helix by treatment with DCA/CHCl3 (v/v = 1:
9) was also incomplete. As seen in Fig. 2B, treatment of the PMLG brushes with formic acid (υ) at elevated temp at 70 °C accelerated the conversion of the original α-helical structure from ∼85% initially to 40% in 10 h; immersing the PMLG brush in DCA/CHCl3 (v/v = 1
:
9) at 20 °C quickly converted the PMLG to an α-helical rich conformation within 2 h, but the α-helical content reached a plateau of ∼70%. The lower conversion efficiency of the PMLG brushes, compared to the spin-coated PMLG, was probably due to the restriction of chain mobility caused by the tethering of one end of the PMLG molecular chain on the solid substrate.
One significant difference between the spin-coated PMLG and the PMLG brushes was that in the case of the PMLG brushes the conversion from α-helix to β-sheet was reversible, whereas for spin-coated PMLG, it was not. The conformational transition of the spin-coated PMLG from β-sheet to α-helix was unsuccessful because the unbound β-sheet PMLG film quickly dissolved in the DCA/CHCl3 (v/v = 1:
9) mixture. In contrast, the PMLG brushes could be transformed back to the α-helix conformation by the DCA/CHCl3 (v/v = 1
:
9) treatment because they were surface grafted. As seen in the FTIR spectra in Fig. 1B(c), after treatment with DCA/CHCl3 (v/v = 1
:
9), most of the α-helix structure was restored, as evidenced by the amide peaks at 1652 cm−1 and 1547 cm−1. The time dependence of helical restoration was shown in Fig. 2B. Additional CD spectra taken after solvent treatments were also shown in Fig. 3, where the PMLG brushes after formic acid (υ) treatment had a minimum at around 217 nm, clearly indicative of a β-sheet conformation, and after treatment with DCA/CHCl3 (v/v = 1
:
9), the spectra had 2 minima, at 208 and 224 nm, indicative of an α-helix conformation. The conformations were cycled from α-helix to β-sheet and back to α-helix a total of 3 times as shown in Fig. 4. Treatment 1 represents the data collected after formic acid (υ) treatment at 60 °C, where a large portion of α-helix was transformed to β-sheet structure, and treatment 2 was the DCA/CHCl3 (v/v = 1
:
9) treatment, which converted the β-sheet back to α-helix. The graph in Fig. 4 shows that the cycle can be repeated for at least 3 times, with very little film depletion during this process. It is interesting to point out that the transition was slowest during the first cycle. For the second and third cycles, the conversion was completed within the initial 2 hours of treatment. The faster transition time after the first cycle might be due to the re-organization of entangled PMLG macromolecules in the films during the first cycle. Furthermore, we observed that the α-helical content gradually reduced over the repeating cycles. Though we cannot completely rule out the degradation or depletion of PMLG chains during the process, the interconvertibility of two conformations were maintained in the remaining films. This observation is similar to a previous study on the sequential treatment of poly (β-benzyl-L-aspartate) between L and R conformations where the R conformation is preferred after several cycles.44
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Fig. 3 CD spectra of conformational changes of surface-tethered PMLG brushes induced from (a) α-helix with DCA/CHCl3 (v/v = 1![]() ![]() |
The detailed mechanism of the helix-to-sheet conversion is still not fully understood. The conversion from α-helix to β-sheet is a process involving the dissociation and then the reformation of hydrogen bonds. A β-sheet-induction reagent should have the ability to dissociate the intramolecular hydrogen bonds, and support the formation of intermolecular hydrogen bonds. It was found that simple organic acids, especially formic acid, have this kind of ability. Nakajima et al.45 proposed a model to explain the mechanism of helix-to-sheet transformation induced by formic acid (υ): the dimeric formic acid forms hydrogen bonds with PMLG chains and, after the evaporation of formic acid molecules, the intermolecular chain hydrogen bonds should be formed, yielding an anti-parallel β-sheet structure. The hydrogen bond reformation required a high degree of intra- and inter-molecular mobility in the molecular chains. The conformation conversion results in Fig. 2A point to a decrease of chain mobility of the end-grafted PMLG brushes, compared to the free chains in a spin-coated film. We hypothesized that if we were to further decrease the mobility of the PMLG brushes, the conversion efficiency would decrease compared to the standard PMLG brushes. We decreased the mobility of the PMLG brushes by capping the end-tethered PMLG chain brushes with another bulky synthetic polypeptide, PBLG. As with the synthesis of the PMLG brushes, SI-VDP was used to synthesize the PMLG-b-PBLG, creating block copolypeptide brushes with the PMLG and PBLG blocks having lengths of 50 and 11 nm, respectively.40
We compared the α-helix to β-sheet conversion efficiency of the PMLG-b-PBLG brushes to the PMLG brushes and to two spin-coated films of PMLG, as shown in Fig. 5. For the spin-coated PMLG films, the α-helix fraction dropped to 20% within 2 days with the treatment of 40 °C formic acid (υ). In contrast, the α-helix fraction of the grafted PMLG and PMLG-b-PBLG decreased only to 50% and 60%, respectively, even after 9 days. The results suggest that while the grafted PMLG brushes could not fully convert to the β-sheet structure, the molecular structure of the PMLG-b-PBLG brushes was even further limited. These results were analogous to the right-to-left conversion of screw sense observed for PBLA-b-PBLG copolypeptide brushes in our previous study.44
The conversion of the PMLG brushes from α-helix to β-sheet was also strongly dependent upon temperature of formic acid (υ), both thermodynamically and kinetically, as illustrated in Fig. 6. PMLG brushes were exposed to formic acid (υ) at temperatures of 20, 40, 60, and 75 °C. At regular intervals the α-helix fraction of each sample was determined by FTIR. At 75 °C, the helical content quickly converted to β-sheet, while at the lower temperatures (20 °C and 40 °C), a comparable content of β-sheet structure could not be achieved.
We also examined the effect of DCA concentration on the conversion of the PMLG brushes from having a preponderance of the β-sheet conformation, after the formic acid (υ) treatment, back to having a majority of the α-helix conformation. The conversion from β-sheet conformation to α-helix was very sensitive to the DCA concentration, as shown in Fig. 7. While 10% of DCA converted the β-sheet to α-helices in 2 h at 20 °C, with a maximum helical content of 70%, the 7.5% DCA can never achieve the same level even after 40 h of treatment.
We used AFM to study whether the surface morphology could be cycled from rough to smooth by solvent treatments. We chose CHCl3 followed by ethanol (CHCl3–ethanol), and ethanol followed by acetone (ethanol–acetone) as the good–bad, and bad–bad solvent pairs, respectively, to treat the PMLG brush films. As observed in AFM images and the corresponding sectional analysis (red lines drawn on the images), the surface morphologies of PMLG brushes were clearly influenced by the solvent treatments. The surface treated with CHCl3–ethanol pair showed a particulate surface with the peak-to-valley difference of ∼30 nm (the cross-sectional profile along the red line), and the root-mean-square (rms) roughness of 8 nm (the 5 × 5 μm image size, Fig. 8A). Interestingly, after treating with ethanol–acetone solvent pair, the surface became amorphous and featureless with the reduction of peak-to-valley difference to ∼8 nm, and rms to 3 nm (Fig. 8B). The ER-FTIR spectra of the PMLG sample after the treatments of solvents pairs show no clear distinction with respect to the absorbance peak locations and intensity, indicating that these treatments did not alter the α-helical conformation and the average molecular orientation in the millimeter scale, the spot size of the IR beam employed (Fig. 8C). Instead, the solvent pair simply alters the aggregated state of PMLG brushes in the submicron level. In the case of CHCl3–ethanol treatment, the use of CHCl3 (a good solvent) first solvates the PMLG brushes, and then the quick rinse by ethanol (a bad solvent) consequently “quenches” the elongated state of PMLG brushes, forming a particulate surface. On the contrary, bad solvent pairs such as the ethanol–acetone pair has very minimal interaction with the PMLG brushes, so the PMLG brushes collapse, forming a flat and smooth surface. The results of the “quench” experiment are similar to what we have studied earlier in the PBLG brush systems.46 Due to the nature of covalently-bound of each polypeptide chain, we were able to demonstrate not only the reversible conformational transitions but also the reversible surface morphologies by simply controlling the molecular interaction with the external stimuli.
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