Ecaterina S.
Beleaev
,
Victor Ch.
Kravtsov
,
Yurii
Chumakov
and
Svetlana G.
Baca
*
Institute of Applied Physics, Moldova State University, Academiei 5, MD-2028 Chisinau, R. Moldova. E-mail: sbaca_md@yahoo.com; svetlana.baca@ifa.usm.md
First published on 8th April 2025
A series of new multi-component supramolecular compounds containing [Co(NH3)6]3+ cations and aromatic sulfonic acid derivatives has been synthesized and characterized using elemental analysis, FT-IR spectroscopy, and single-crystal X-ray diffraction. The series includes [Co(NH3)6](pys)3·Hpys (1), [Co(NH3)6](pys)2Cl·2MeCN (2), [Co(NH3)6](3-sb)Cl·4H2O (3), [Co(NH3)6]2(3-sb)(SO4)Cl2·7H2O (4), {[Co(NH3)6][Na(3-sb)Cl2]·H2O}n (5), {[Co(NH3)6][K2(4-sb)2Cl]}n (6), and [Co(NH3)6](Hssz)(ssz)·4H2O (7) (where Hpys = 3-pyridinesulfonic acid, H2sb = 3-/4-sulfobenzoic acid, H2ssz = sulfasalazine). Single-crystal X-ray diffraction analysis reveals that the compounds are ionic and multi-component, with complex [Co(NH3)6]3+ cations forming hydrogen bonds with anions and solvate molecules. The presence of alkali metal cations in the crystals of 5 and 6 leads to the formation of anionic coordination polymers, 1D in 5 and 3D in 6, which are H-bonded to complex [Co(NH3)6]3+ cations. Hirshfeld surface analysis and 2D fingerprint plots demonstrate that the hexaamminecobalt(III) cation exhibits significant hydrogen bond capability when co-crystallized with derivatives of sulfonic acid, and in addition to hydrogen bonds of N–H⋯O type between the amine ligands and the sulfonate groups, π⋯π stacking and C−H⋯π interactions contribute significantly in stabilizing the supramolecular architectures. Energy decomposition analysis of the intermolecular interaction energy was performed using the SAPT method to study the non-covalent bonding interactions of [Co(NH3)6]3+ cations with various aromatic sulfonic acid derivatives in 1–7.
An important role in the manifestation of the properties of cobalt-based compounds is played by ligands, which can stabilize a particular oxidation state of the metal through a wide range of donor atoms as well as form additional non-covalent interactions in the solids. The formation of non-covalent interactions, particularly hydrogen bonding networks, allows fine-tuning of the chemical and physical properties of the resulting solid materials.14 The hexaamminecobalt(III) cation, [Co(NH3)6]3+, is a unique donor of multiple hydrogen bonds through its six coordinated NH3 groups15–39 and has the ability to form a stable supramolecular framework in numerous multi-component compounds with different organic moieties (Table S1†). Recently, we have shown that the bulky [Co(NH3)6]3+ cations serve as a structure-organizing component involving all eighteen H-atoms without exception in hydrogen bonds with anions or with neutral and solvent molecules in a family of multi-component crystalline compounds.40 Biological studies of these compounds against the oncogenic bacterium Rhizobium (Agrobacterium) vitis demonstrated the efficacy of the multi-component solids, and the compound comprising hexaamminecobalt(III) chloride and 1,10-phenanthroline showed the highest inhibitory potential and is therefore qualified for application against bacterial cancer in plants.
In continuation of our research on the development of multi-component solids with biological properties, we report here the synthesis of a new series of compounds comprising the [Co(NH3)6]3+ cation and aromatic sulfonic acid derivatives. The sulfonic acid derivatives bearing SO3− groups have a great tendency to form hydrogen bonds, thereby facilitating the formation of a diverse array of supramolecular motifs,41–43 which is confirmed by the results from previous studies of compounds incorporating [Co(NH3)6]3+ cations and organic sulfonate anions.18–20,25,27,30,31 The prepared series includes the following compounds: [Co(NH3)6](pys)3·Hpys (1), [Co(NH3)6](pys)2Cl·2MeCN (2), [Co(NH3)6](3-sb)Cl·4H2O (3), [Co(NH3)6]2(3-sb)(SO4)Cl2·7H2O (4), {[Co(NH3)6][Na(3-sb)Cl2]·H2O}n (5), {[Co(NH3)6][K2(4-sb)2Cl]}n (6), and [Co(NH3)6](Hssz)(ssz)·4H2O (7) (where Hpys = 3-pyridinesulfonic acid, H2sb = 3-/4-sulfobenzoic acid, H2ssz = sulfasalazine, Scheme 1). The structures of all compounds have been solved by single-crystal X-ray diffraction, and additional insight into the nature and strength of the interactions between the components of the compounds has been provided by Hirshfeld surface analysis. Energy decomposition analysis of the intermolecular interaction energy (Eint) has been performed for pairs of complex cations and anions, which are linked by hydrogen bonds.
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| Scheme 1 Schematic representation of the aromatic sulfonic acid derivatives used in the synthesis of 1–7. | ||
:
1) mixture, 0.01 g (0.067 mmol) triethanolamine was added. The resulting solution was ultrasonicated at 50 °C for 30 min and then filtered. The filtered mixture was placed in a vial and covered with a plastic cap to allow slow evaporation at room temperature. Orange needle-like crystals 2 suitable for X-ray analysis were filtered after 2 weeks, washed with acetonitrile and dried in air. Yield: 0.005 g (24% based on 3-pyridinesulfonic acid). Elemental analysis calcd for 2, C14H32ClCoN10O6S2 (594.99 g mol−1): C, 28.26; H, 5.42; N, 23.54%. Found. C, 27.96; H, 5.14; N, 23.22%. IR (cm−1): 3299 m, 1623 m, 1577 m, 1420 m, 1400 m, 1341 m, 1327 m, 1188 s, 1136 sh, 1043 m, 1007 s, 915 sh, 873 m, 857 m, 745 m.
:
1) mixture and air-dried. Yield: 0.012 g (26% based on [Co(NH3)6]Cl3). Elemental analysis calcd for 3, C7H24ClCoN6O9S (462.76 g mol−1): C, 18.17; H, 5.23; N, 18.16%. Found. C, 17.87; H, 5.91; N, 18.00%. FT-IR (cm−1): 3256 m, 3134 sh, 2952 sh, 2923 s, 2854 sh,1593 s, 1556 s, 1464 m, 1380 s, 1342 m, 1300 sh, 1174 vs, 1163 sh, 1102 s, 1078 sh, 1030 s, 997 m, 877 m, 761 m.
:
1) mixture (6 mL). The mixture was stirred for 5 min at room temperature, then placed in an ultrasonic bath and sonicated at 50 °C for 30 min. The resulting mixture was filtered and the mother liquor was allowed to evaporate slowly at room temperature in a sealed vial. Orange plate-like crystals 5 suitable for X-ray analysis were filtered after one month, washed with an ethanol/water solution (2
:
1) and air-dried. Yield: 0.013 g (31% based on the sodium salt of 3-sulfobenzoic acid). Elemental analysis calcd for 5, C7H22Cl2CoN6NaO5.69S (466.18 g mol−1): C, 18.01; H, 4.70; N, 18.01%. Found. C, 17.89; H, 4.32; N, 18.19%. FT-IR (cm−1): 3477 sh, 3144 br.s, 2952 sh, 2923 s, 2854 sh, 1591 br.m, 1542 m, 1463 m, 1412sh, 1377 m, 1366 sh, 1354 m, 1324 vs, 1220 m, 1182 m, 1150 m, 1092 m, 1031 m, 998 w, 914 sh, 826 s, 755 m, 665 w.
:
1) mixture (6 mL). The mixture was stirred for 5 min at room temperature, then placed in an ultrasonic bath and sonicated at 50 °C for 30 min. The resulting mixture was filtered and the mother liquor was allowed to evaporate slowly at room temperature in a sealed vial. Orange plate-like crystals 6 suitable for X-ray analysis were filtered after one month, washed with ethanol/water (2
:
1) and air-dried. Yield: 0.018 g (26% based on [Co(NH3)6]Cl3). Elemental analysis calcd for 6, C14H26ClCoK2N6O10S2 (675.11 g mol−1): C, 24.88; H, 3.85; N, 12.44%. Found. C, 24.74; H, 3.84; N, 12.35%. FT-IR (cm−1): 3507 sh, 3257 m, 3155 sh, 1631 sh, 1591 m, 1544 m, 1394 sh, 1377 m, 1351 m, 1331 sh, 1175 vs, 1144 sh, 1114 s, 1031 s, 1005 m, 864 m, 843 m, 774 w, 740 m, 693 w.
:
1) mixture (6 mL). The mixture was stirred for 5 min at room temperature, then placed in an ultrasonic bath and sonicated at 50 °C for 30 min. The resulting mixture was filtered and the mother liquor was allowed to evaporate slowly at room temperature in a sealed vial. Orange block-like crystals 7 suitable for X-ray analysis were filtered after one week, washed with an ethanol/water solution (1
:
2) and air-dried. Yield: 0.068 g (66% based on [Co(NH3)6]Cl3). Elemental analysis calcd for 7, C36H46CoN14O14S2 (1021.92 g mol−1): C, 42.31; H, 4.54; N, 19.19%. Found. C, 42.32; H, 4.74; N, 18.86%. FT-IR (cm−1): 3286 br.w, 2967 m, 2928 sh, 2869 sh, 1599 vs, 1532 sh, 1471 s, 1424 vs, 1371 s, 1360 sh, 1286 m, 1241 m, 1162 m, 1133 m, 1120 sh, 1084 m, 1052 s, 1005 sh, 977 sh, 963 sh, 834 sh, 801 s, 775 sh.
| 1 | 2 | 3 | 4 | |
|---|---|---|---|---|
| Formula | C20H35CoN10O12S4 | C14H32ClCoN10O6S2 | C7H24ClCoN6O9S | C7H53Cl2Co2N12O16S2 |
| M r/g mol−1 | 794.75 | 594.99 | 462.76 | 814.49 |
| Cryst. system | Orthorhombic | Triclinic | Orthorhombic | Triclinic |
| Space group | Fddd |
P![]() |
Pnma |
P![]() |
| a/Å | 14.9159(12) | 7.4363(6) | 25.0699(10) | 7.4383(5) |
| b/Å | 18.4135(9) | 8.2733(6) | 7.2512(4) | 12.0736(9) |
| c/Å | 22.7514(13) | 11.5486(14) | 10.8265(6) | 19.2979(12) |
| α/° | 90 | 110.849(9) | 90 | 100.100(6) |
| β/° | 90 | 94.899(8) | 90 | 98.038(6) |
| γ/° | 90 | 90.864(6) | 90 | 91.656(6) |
| V (Å3) | 6248.8(7) | 660.76(11) | 1968.12(17) | 1686.9(2) |
| Z | 8 | 1 | 4 | 2 |
| Final R1, wR2 | 0.0442, 0.1212 | 0.0353, 0.0899 | 0.0485, 0.1471 | 0.0579, 0.1316 |
| R indices R1, wR2 (all data) | 0.0553, 0.1278 | 0.0453, 0.0977 | 0.0584, 0.1559 | 0.1017, 0.1601 |
| CCDC | 2415770 | 2415775 | 2415776 | 2415772 |
| 5 | 6 | 7 | |
|---|---|---|---|
| Formula | C7H22Cl2CoN6NaO5.69S | C14H26ClCoK2N6O10S2 | C36H46CoN14O14S2 |
| M r/g mol−1 | 466.18 | 675.11 | 1021.92 |
| Cryst. system | Monoclinic | Tetragonal | Triclinic |
| Space group | P21/m | I4/m |
P![]() |
| a/Å | 14.489(3) | 14.3265(5) | 12.9654(5) |
| b/Å | 6.8710(10) | 14.3265(5) | 13.1933(6) |
| c/Å | 17.692(3) | 24.7933(16) | 16.5514(9) |
| α/° | 90 | 90 | 83.432(4) |
| β/° | 97.903(17) | 90 | 72.016(4) |
| γ/° | 90 | 90 | 68.761(4) |
| V (Å3) | 1744.6(5) | 5088.8(5) | 2510.0(2) |
| Z | 4 | 8 | 2 |
| Final R1, wR2 | 0.0528, 0.0847 | 0.0435, 0.1095 | 0.0648, 0.1764 |
| R indices R1, wR2 (all data) | 0.1081, 0.0902 | 0.0621, 0.1200 | 0.1000, 0.2021 |
| CCDC | 2415773 | 2415771 | 2415774 |
The IR spectra of compounds 1–7 (Fig. S2–S8†) reveal the presence of characteristic bands for the coordinated ammonia (NH3) molecules of the [Co(NH3)6]3+ complex cation, exhibiting absorption within the range of 3159–3135 cm−1 due to asymmetric and symmetric stretching vibrations (νas+s(N–H)). Furthermore, the spectra exhibit absorption within the ranges of 1593–1570 cm−1 and 1342–1326 cm−1, which can be attributed to bending vibrations (δas(HNH) and δs(HNH), respectively). Finally, a pronounced band at 877–825 cm−1 is evident, which can be attributed to in-plane and out-of-plane rocking vibrations, ρr(NH3). These observations are consistent with those documented in the precursor [Co(NH3)6]Cl3 (Fig. S1†), exhibiting slight displacements due to the formation of hydrogen bonds in the corresponding compounds as well as previously reported {Co(NH3)6]-based multi-component compounds.40 This displacement may also contribute to the formation of supramolecular motifs. The asymmetric and symmetric C−H stretching vibrations from organic ligands were identified within the range of 2967–2841 cm−1. In compounds 1 and 6, these vibrations exhibited an overlap with strong vibrations of the amine groups from the complex cation [Co(NH3)6]3+. In 1 and 2, the ring stretching vibrations of the pys− anion occur in the general region of 1623–1400 cm−1.55 These are superimposed with the deformation oscillations of the amine groups in this region. Asymmetric and symmetric stretching vibrations of the deprotonated carboxylic group of the sulfobenzoate ion in compounds 3–6 were observed in the region 1670–1542 cm−1 and 1488–1460 cm−1, respectively, as weak and medium bands that overlap with the δ(HNH) vibration. In contrast, the asymmetric and symmetric stretching vibrations of the protonated and deprotonated carboxylic groups from sulfasalazine in 7 manifested as very strong bands at 1599 and 1424 cm−1, respectively. The asymmetric and symmetric stretching vibrations of sulfonic groups are found in the region of 1395–1379 cm−1 and 1189–1004 cm−1, respectively.56
(Table 1). The compounds are ionic and multi-component, formed by hydrogen bonds between the complex cations, anions, and solvation molecules as well as by coordination bonds with alkali metals in compounds 5 and 6. In all structures, the cobalt(III) cations are coordinated to six ammonia molecules at the vertices of an octahedron, with Co–N distances ranging from 1.944 to 1.984 Å. These distances are comparable with those observed in related compounds for the [Co(NH3)6]3+ complex cation.19,31,39,40 It is noteworthy that in all cases, except 4, the Co(III) complex cation provides all 18 hydrogen atoms for hydrogen bond formation. Furthermore, the presence of charge-assisted hydrogen bonds of N–H⋯O type between the amine ligands and the sulfonate groups in the structure is a common feature for all compounds 1–7.
The compound [Co(NH3)6](pys)3·Hpys (1) is composed of a [Co(NH3)6]3+ cation, a pys− anion, and a neutral Hpys molecule in zwitterion form with a 1
:
3
:
1 stoichiometry (Fig. 1a). The cation is located at the intersection of three twofold axes. The asymmetric part of the unit cell comprises one quarter of the cation, three quarters of the pys− anion, and one quarter of the neutral Hpys molecule (Fig. S9a†). In the model of structure, the pys− anion and the neutral Hpys molecules in the asymmetric part of the unit cell are located at approximately the same place, overlap almost completely, and differ mainly in the position of the nitrogen atom, N3A and N3B. In each of these two close positions A and B, the organic components have been refined with a site occupancy factor of 0.5. In position A (N3A), the neighboring twofold related pys− anions are linked by a couple of C(2)−H⋯N(3A) bonds with a distance of 2.941(8) Å. In position B (N3B), the neighboring twofold related components form an N(3B)−H⋯N(3B) = 2.879(8) Å bond, as illustrated in Fig. 1a. Only one N3B in such a dimer is protonated. However, since these components are symmetry related and indistinguishable from a structural point of view, the H atom should be statistically distributed between these two equivalent nitrogen atoms, providing a charge balance in the structure because one of the components is charged and another one is neutral. The disordered model with ‘half’ H atoms has been used in refinement.
In the crystal structure, each [Co(NH3)6]3+ cation is surrounded by and H-bonded with six pys− anions and two Hpys zwitterions, and each pys−/Hpys is hydrogen-bonded to two neighboring [Co(NH3)6]3+ cations. All 18 hydrogen atoms of the hexaamminecobalt cation are involved in N−H⋯O hydrogen bonds with SO3− groups, forming a 3D hydrogen-bonded network in 1 (Table S4† and Fig. 1b and S9b†). The pys− and Hpys components exhibit infinite π⋯π stacking interactions between their pyridine moieties along the [101] and [10–1] directions, with a centroid⋯centroid distance ranging from 3.225 to 4.044 Å (Fig. S9c†).
The crystals of compound 2, [Co(NH3)6](pys)2Cl·2MeCN, are composed of a complex cation [CoIII(NH3)6]3+, pys− and Cl− anions, and solvent MeCN molecules with a 1
:
2
:
1
:
2 stoichiometry, so unlike 1, comprise two different anionic components (Fig. S10b†). The asymmetric part of the unit cell comprises half of the [Co(NH3)6]3+ cation and half of the Cl− anion, which reside on inversion centers, a pys− anion, and a MeCN molecule (Fig. S10a†). The ionic components within the crystal are associated by charge-assisted extended N−H⋯O hydrogen bonds. All 18 hydrogen atoms of the [Co(NH3)6]3+ cation are involved in the formation of these hydrogen bonds (Table S4†). Each cation is surrounded by four pys− anions and each pys− anion serves as a bridge between cations, forming an N−H⋯O hydrogen-bonded chain along the a axis (Fig. S10c and d†). Additionally, chloride anions bridge cations by N−H⋯Cl H-bonds along the b axis, facilitating the formation of a 2D hydrogen-bonded layer, as shown in Fig. 2a and S10e.† The hydrophilic H-bonded components reside inside the layer and the hydrophobic ones on its surfaces. In the crystal, the parallel layers are stacked along the c axis, creating infinite hourglass-shaped channels along the b axis. These channels are filled with acetonitrile solvent molecules (Fig. 2b).
The synthesis of compounds 3–6 with hexaamminecobalt(III) chloride has been achieved through the use of the sodium salt of 3-sulfobenzoic acid and the potassium salt of 4-sulfobenzoic acid. These organic anions possess an additional functional group, such as a carboxylate group, which, in combination with the sulfonate group, may serve as both mono- and dianion, thus allowing for the modulation of the functionality of the final materials with a wide range of structural motifs and properties.
The orthorhombic crystals (space group Pnma) of compound 3, [Co(NH3)6](3-sb)Cl·4H2O, comprise [Co(NH3)6]3+ cations, 3-sb2− dianions, Cl− anions, and water molecules in a 1
:
1
:
1
:
4 stoichiometry (Fig. S11b†). The asymmetric unit of 3 consists of half of the [Co(NH3)6]3+ cation, half of the organic dianion derived from deprotonated 3-sulfobenzoic acid, half of the Cl− anion, and one solvate water molecule, all residing on the mirror plane (Fig. S11a†). The cation forms hydrogen N−H⋯O bonds with four 3-sb2− anions, involving oxygen atoms from three sulfonate groups and one oxygen atom from the carboxylate group of the fourth 3-sb. Additionally, it forms three N−H⋯Cl bonds with chloride anions and three N−H⋯O bonds with disordered water molecules, saturating all 18 of its possible H-bonds (Fig. S11c and Table S4†). The 3-sb2− dianion is connected to three [Co(NH3)6]3+ cations by N−H⋯O bonds originating from the sulfonate group, and to one cation by an oxygen atom of the carboxylate group (Fig. S11d†). The chloride anion is connected by N−H⋯Cl bonds with three neighboring cations. The hydrogen bonds of the [Co(NH3)6]3+ cations with the sulfonate groups and chloride anions result in the formation of a well-defined supramolecular layer parallel to the bc plane (Fig. 3a).
In the crystal, neighboring layers are linked by 3-sb2− anions via H-bonds of sulfonate and carboxylate groups with cations, thus uniting the layers in a 3D supramolecular motif and forming the channels parallel to the b axis that are filled by both ordered and disordered water solvent molecules (Fig. 3b). The 3-sb2− anions reside in parallel planes separated by 3.626 Å and show the formation of infinite π⋯π stacking of aromatic moieties with a centroid⋯centroid separation of 4.031 Å (Fig. S11e†).
Compound 4, [Co(NH3)6]2(3-sb)(SO4)Cl2·7H2O, consists of [Co(NH3)6]3+ cations, 3-sb2− and SO42− dianions, chloride anions, and water molecules with a 2
:
1
:
1
:
2
:
7 stoichiometry. In comparison to compound 3, compound 4 differs by the presence of the sulfate anion, which forms under hydrothermal heating of the starting precursors, and inorganic components essentially predominate in the composition. The crystal structure of 4 reveals the existence of three crystallographically independent [Co(NH3)6]3+ cations (Co2, Co1, and Co3): one in the general position and two in the special ones on the inversion centers (Fig. 4 and S12a†).
Similar to 3, the cation in the general position (Co2) forms N−H⋯O hydrogen bonds with four 3-sb2− anions, involving oxygen atoms from three different sulfonate groups and one oxygen atom from the carboxylate group. However, the further environment is different, exhibiting H-bonds with two chloride anions, one sulfate anion, and two water molecules. Only 17 hydrogen atoms out of 18 possible participate in these H bonds (Table S4†). One of the cations, situated in a special position (Co1), is surrounded by and H-bonded with four sulfate dianions and two chloride anions, using all 18 hydrogen atoms of the cation. The second one in the special position (Co3) is surrounded by and H-bonded with two sulfate dianions, four chloride anions, and four water molecules, involving all H atoms of the cation (Fig. S12b and Table S4†). The inorganic component, comprising centrosymmetric hexaamminecobalt(III) cations (Co1 and Co3), sulfate and chloride anions linked by charge-assisted H-bonds, forms well-defined pure inorganic supramolecular layers oriented parallel to the ab plane (Fig. 4a). The structural role of the 3-sb2− dianions is comparable to that observed in compound 3. In 4, the 3-sb2− dianions are also linked to three [Co(NH3)6]3+ cations by N−H⋯O bonds of the sulfonate group and to another cation by an oxygen atom of the carboxylate group (Fig. S12c†). Similar to 3, the center symmetry-related 3-sb2− dianions in 4 are situated in parallel planes, separated by 3.537 and 3.612 Å, and alternate in an antiparallel mode. They partially overlap and form infinite π⋯π stacking along the a axis with centroid⋯centroid separations of their aromatic moieties of 4.526 and 3.982 Å (Fig. S12c†).57 The H-bonded charged components in 4 form infinite channels along the a axis, which are filled by water solvent molecules (Fig. S12d†).
Compounds 5, {[Co(NH3)6][Na(3-sb)Cl2]·H2O}n, and 6, {[Co(NH3)6][K2(4-sb)2Cl]}n, were obtained by crystallization from a solution of the corresponding starting precursors in EtOH/H2O and subjected to sonication. Their structure revealed the formation of alkali metals containing coordination polymers (Fig. 5 and 6). In the case of the monoclinic crystals of compound 5, all ionic components in the structure reside in special positions on mirror planes of the space group P21/m and the asymmetric part of the unit cell contains two halves of [Co(NH3)6]3+ and Na+ cations, two halves of 3-sb2− dianions, four halves of Cl−, and disordered water solvent molecules (Fig. S13a†). The crystal structure reveals two types of similar but symmetry-independent negatively charged [Na(3-sb)Cl2]3− double-stranded polymeric chains, all running along the b axis and each involving only symmetry-related sodium atoms, Na1 or Na2 (Fig. 5a and S13b†). The chains are formed by the coordination of the 3-sb2− anion to three sodium cations through sulfonate and carboxylate groups. The sodium atoms have Cl2O3 surrounding due to coordination three 3-sb2− anions via oxygen atoms of two sulfonate groups and one carboxylate group, and two Cl− anions. The coordination Na1 is intermediate between square planar and trigonal pyramidal, with a distortion parameter of τ = 0.489, and is more closely related to square planar for Na2, τ = 0.358 (τ = 1 for a trigonal pyramidal and τ = 0 for a square planar geometry). The 3-sb2− anions inside the chains show infinite π⋯π stacking interactions with interplanar separation of their mean planes of 3.436 Å and centroid⋯centroid distances in the range of 3.722–3.757 Å (Fig. S13b†). The double-stranded chains interconnected by charge-assisted H-bonds with [Co(NH3)6]3+ cations, resulting in the formation of a 3D hydrogen-bonded network (Fig. 5b and S13c†). Each of the two symmetry-independent hexaamminecobalt(III) cations is H-bonded to five chloride anions and two 3-sb2− dianions, and the cations associated with Co2 show additional hydrogen bonding with partial occupancy disordered water solvent molecules. All 18 hydrogen atoms of [Co(NH3)6]3+ cations participate in H-bonds (Table S4†).
Tetragonal crystals of compound 6 contain larger in size potassium alkali cations and 4-sb2− organic dianions instead of 3-sb2− ones compared to those observed in 5. In the crystal, cobalt atoms (Co1, Co2, and Co3) of hexaamminecobalt(III) cations reside on the intersection of the fourfold axes and mirror planes, and chloride anions reside on the mirror plane of symmetry of the space group I4/m (Fig. S14a†). The 4-sb2− dianions and potassium cation are located in general positions. The potassium atom coordinates four 4-sb2− anions, two of which are bound by the oxygen atom of the sulfonate group in monodentate and chelate modes, while the remaining two are attached via the carboxylate groups in a monodentate mode. All five oxygen atoms are close to common mean plane, and the maximal deviation is 0.132 Å. The potassium atom is displaced from this plane by a distance of only 0.096 Å toward the chloride anion at the apical position. The coordination polyhedron of the potassium atom exhibits the rare pentagonal pyramid configuration observed for this atom (Fig. S14b†).
The 4-sb2− dianions coordinate to the potassium cations through their sulfonate and carboxylate groups, linking them in layers parallel to the ab plane and also bridging two neighboring layers in the walls with hydrophilic components on their surfaces and hydrophobic ones inside. The parallel walls are perpendicular to the c axis. The chloride anions bridge such walls along the c axis, resulting in a 3D anionic network with α-polonium-like topology (Fig. S14c and d†). The hexaamminecobalt(III) cations are located inside this network and interact by charge-assisted N−H⋯O and N−H⋯Cl bonds. All 18 hydrogen atoms of each [Co(NH3)6]3+ cation participate in these H-bonds (Fig. 6 and Table S4†).
The triclinic crystals of compound 7 consist of [Co(NH3)6]3+ cations, monodeprotonated (Hssz−) in the imide form and bideprotonated (ssz2−) sulfasalazine anions, and water solvate molecules in a 1
:
2
:
4 stoichiometry (Fig. S15a†). The organic anions in this compound are the bulkiest of the organic anions reported here, and both mono- and dianions have similar angular conformation. The cation [Co(NH3)6]3+ is N−H⋯O and N−H⋯N bonded with six anions: four ssz2− and two Hssz−. One of the four ssz2− dianions is linked to the cation via two oxygen atoms of the carboxylic group and an oxygen atom of its hydroxylic group, two of the dianions via an oxygen atom of the sulfonamide group, and in addition, one of them via its nitrogen imide atom, and the remaining one via an oxygen atom of the hydroxylic group (Fig. S15b†). One of the Hssz− monoanions forms H-bonds with the cation via the oxygen atoms of the sulfonamide group, while another one via the oxygen atoms of the carboxylic group. The cationic environment is completed by a well-defined H-bond with the water molecule and also by three H-bonds with highly disordered water molecules, thus involving all 18 hydrogen atoms of the cation in H-bonding. In the crystal, two center symmetry-related Hssz− monoanions are linked by two N−H⋯N bonds, with the participation of the pyridine and sulfonamide groups, to form a supramolecular synthon R22(8)41,58 (Fig. S15c†).
The hydrogen-bonded ionic components form a supramolecular 3D structure with infinite channels running along the [−110] directions, which are filled with disordered water solvent molecules (Fig. 7). The formation of additional π⋯π interactions between the phenyl rings of neighboring Hssz− monoanions (centroid⋯centroid distance of 3.868 Å) as well as between neighboring ssz2− dianions (centroid⋯centroid distance of 4.099 Å) contributes to the extended crystal packing in 7 (Fig. S15d†).
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| Fig. 7 (a) The crystal packing illustrates the formation of a 3D supramolecular network in 7. (b) Channels in the crystal structure of 7. Hydrogen bonds are shown as blue dashed lines. | ||
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| Fig. 8 Relative contributions to the Hirshfeld surface for the major intermolecular contacts in 1–7 around organic moieties. | ||
It was shown that the cocrystals of the compound [Co(NH3)6]Cl3·2(phen)·3H2O (where phen is neutral 1,10-phenanthroline) possess biological activity against bacterial cancer in plants and the calculated absolute value of binding energy between the cation and the neutral ligand, linked by hydrogen bonds, is minimal among the studied compounds.40 Therefore, Table 2 represents the interaction energy between those [Co(NH3)6]3+ and anions, whose absolute values of Eint are minimal for each compound 1–7. The absolute values of the calculated interaction energies decrease in the following order, E3 > E4 > E7 > E6 > E5 > E2 > E1, and the found minimal energy E1 (239.433 kcal mol−1) is significantly greater than that in the published compound [Co(NH3)6]Cl3·2(phen)·3H2O (73.915 kcal mol−1 (ref. 40). The mean values of hydrogen bonds in Table 2 are not correlated with absolute values of Eint because of the following order of d values: d6 > d2 > d1 > d7 > d4 > d5 > d3. In all selected pairs, the electrostatic term dominates in the calculated binding energies, followed by induction interaction. The interaction energies of two-component systems in 1–7 and of the inactive compounds in ref. 40, with the exception of [Co(NH3)6]Cl3·2(phen)·3H2O, are in the same order of magnitude because they are in ranges of −239.433–−354.788 kcal mol−1 and −212.313–−448.3 kcal mol−1, respectively. Thus, it can be assumed that compounds 1–7 will demonstrate reduced sensitivity to the oncogenic bacterium Rhizobium (Agrobacterium) vitis in comparison to [Co(NH3)6]Cl3·2(phen)·3H2O.
| Selected pairs | O⋯H, Å | E elst | E exch | E ind | E disp | E int | d (Å) |
|---|---|---|---|---|---|---|---|
| a d – mean values of O⋯H hydrogen bonds. | |||||||
| [Co(NH3)6]3+·(pys)− (1) | 2.26 | −219.496 | 11.409 | −26.524 | −4.821 | −239.433 | 2.19 |
| 2.18 | |||||||
| 2.14 | |||||||
| [Co(NH3)6]3+·(pys)− (2) | 2.41 | −221.058 | 11.760 | −26.877 | −4.879 | −241.054 | 2.23 |
| 2.15 | |||||||
| 2.13 | |||||||
| [Co(NH3)6]3+·(sb)2− (3) | 2.10 | −330.671 | 17.774 | −36.515 | −5.375 | −354.788 | 2.09 |
| 2.10 | |||||||
| 2.09 | |||||||
| [Co(NH3)6]3+·(sb)2− (4) | 2.20 | −326.317 | 15.753 | −34.921 | −4.952 | −350.437 | 2.11 |
| 2.10 | |||||||
| 2.04 | |||||||
| [Co(NH3)6]3+·(sbNa)− (5) | 2.14 | −231.629 | 12.898 | −33.541 | −4.933 | −257.205 | 2.10 |
| 2.08 | |||||||
| 2.08 | |||||||
| [Co(NH3)6]3+·(sbK)− (6) | 2.64 | −162.161 | 22.260 | −154.438 | −9.470 | −303.809 | 2.37 |
| 2.30 | |||||||
| 2.16 | |||||||
| [Co(NH3)6]3+·(ssz)2− (7) | 2.18 | −302.701 | 16.565 | −35.018 | −5.215 | −326.368 | 2.15 |
| 2.16 | |||||||
| 2.13 | |||||||
Footnote |
| † Electronic supplementary information (ESI) available: Table S1. [Co(NH3)6]-based compounds; Table S2. Crystal data and details of structural determinations for 1–7; Table S3. Selected bond distances (Å) and angles (deg) in 1–7; Table S4. Details of the hydrogen bonding interactions in 1–7; Table S5. SAPT decomposition of the interaction energies; Fig. S1. IR spectrum of [Co(NH3)6]Cl3; Fig. S2–S8. IR spectra of 1–7; Fig. S9–S15. Additional details in the structures of 1–7; Fig. S16–S18. Hirshfeld surface; Fig. S19. 2D fingerprint plots; Fig. S20. View of all selected pairs for estimation of their interaction energies. CCDC 2415770–2415776. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d5ce00184f |
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