Themed collection Most popular 2025 theoretical and computational chemistry articles
Orbital-based bonding analysis in solids
The wave function remains central to understanding chemical bonding, with orbitals allowing to analyse various interactions most conveniently, as exemplified for molecular solids using the LOBSTER package extracting them from plane-wave calculations.
Chem. Sci., 2025,16, 12212-12226
https://doi.org/10.1039/D5SC02936H
Antioxidant activity at the molecular level: exploring ways of action and computational tools to investigate them
Antioxidant protection involves complex chemistry, related to their versatile ways of action. Identifying suitable candidates for this purpose, requires more than one criterion; otherwise, predictions should be cautious and specific.
Chem. Sci., 2025,16, 19570-19593
https://doi.org/10.1039/D5SC05463J
Computational tools for the prediction of site- and regioselectivity of organic reactions
This article reviews computational tools for the prediction of the regio- and site-selectivity of organic reactions. It spans from quantum chemical procedures to deep learning models and showcases the application of the presented tools.
Chem. Sci., 2025,16, 5383-5412
https://doi.org/10.1039/D5SC00541H
Grammar-driven SMILES standardization with TokenSMILES
TokenSMILES is a grammatical framework that redefines the syntactic rules of SMILES, representing molecules as structured sentences.
Chem. Sci., 2026,17, 1666-1675
https://doi.org/10.1039/D5SC05004A
Beyond real: alternative unitary cluster Jastrow models for molecular electronic structure calculations on near-term quantum computers
Im-uCJ and g-uCJ ansätze extend orbital rotations into complex space. Implemented exactly via generalized Givens rotations, these ansätze achieve higher accuracy and more robust optimization than the currently available Re-uCJ.
Chem. Sci., 2025,16, 22299-22313
https://doi.org/10.1039/D5SC03585F
Aromaticity switching by quantum tunnelling
Carbon tunnelling in pentalene-based polycyclic molecules enables ultrafast π-bond rearrangements switching local aromaticity/antiaromaticity, or leading to a quantum “Schrödinger's aromaticity cat” in a coherent tunnelling regime.
Chem. Sci., 2025,16, 21386-21393
https://doi.org/10.1039/D5SC05717E
Selectivity trends in two-electron oxygen reduction: insights from two-dimensional materials
Advancing the discovery of novel materials for electrosynthesis of hydrogen peroxide (H2O2) via the two-electron oxygen reduction reaction (2e-ORR) while rationalizing and quantifying selectivity trends has been an ambitious objective.
Chem. Sci., 2025,16, 15926-15934
https://doi.org/10.1039/D5SC04904K
Significance of halogen bonding in the synergistic nucleation of iodine oxoacids and iodine oxides
I2O4 was found to synergistically nucleate with HIO3–HIO2 and halogen bond-induced basicity enhancement was identified as the chemical nature of I2O4 behaving as a base in the nucleation with HIO3/HIO2.
Chem. Sci., 2025,16, 15935-15946
https://doi.org/10.1039/D5SC02517F
Deciphering potential-driven dynamics in Fe–N–C catalysts: ab initio insights into Fe–N switching and spin-state transition
The FeN4 centers with pyridinic or pyrrolic nitrogen environments in pyrolyzed Fe–N–C materials exhibit distinct structural and electronic responses to applied potential.
Chem. Sci., 2025,16, 14894-14904
https://doi.org/10.1039/D5SC03057A
Unusual differential cross sections for the H + D2O → D + HOD exchange reaction induced by the C3V transition state and quantum interference
For the first time, a sideward-scattered angular distribution is observed just above the threshold, directly reflecting the 107° bending angle in the C3V transition state of the title reaction.
Chem. Sci., 2025,16, 14931-14939
https://doi.org/10.1039/D5SC03277F
Predicting pore-carrier solubility and size-exclusivity towards the rational design of type II porous liquid solutions
By combining solubility prediction software and a size-exclusivity prediction algorithm with a down-selection procedure and experimental validation steps, a computational workflow has been developed for the discovery of porous liquid solutions.
Chem. Sci., 2025,16, 11897-11907
https://doi.org/10.1039/D5SC01875G
Water entropy at the threonine-rich surface of antifreeze and ice-nucleating proteins: small changes make a big difference
Low-entropy water near threonine on ice-nucleating proteins promotes ice formation at moderate supercooling, while flexible threonine on antifreeze proteins keeps water bulk-like, preventing ice nucleation.
Chem. Sci., 2025,16, 10771-10784
https://doi.org/10.1039/D4SC08383K
Retro-forward synthesis design and experimental validation of potent structural analogs of known drugs
Generation of structural analogs to “parent” molecule(s) of interest remains one of the important elements of drug development.
Chem. Sci., 2025,16, 8383-8393
https://doi.org/10.1039/D5SC00070J
Discovery of a molecular adsorbent for efficient CO2/CH4 separation using a computation-ready experimental database of porous molecular materials
Efficient identification of a molecular adsorbent for CO2/CH4 separation using a computation-ready experimental database of macrocycles and cages.
Chem. Sci., 2025,16, 7685-7694
https://doi.org/10.1039/D5SC01532D
Graphendofullerene: a novel molecular two-dimensional ferromagnet
We introduce graphendofullerene, a novel molecular-based 2D magnetic material formed by trimetallic nitride clusters encapsulated on graphullerene, paving the way for a wide range of possibilities due to the host capabilities of fullerene.
Chem. Sci., 2025,16, 7659-7666
https://doi.org/10.1039/D5SC01278C
An argument for abandoning the “allowed” and “forbidden” classification of electrocyclic reactions
The energy gaps between “forbidden” and “allowed” mechanisms of routine electrocyclic reactions can be negligibly small.
Chem. Sci., 2025,16, 4264-4278
https://doi.org/10.1039/D4SC08748H
A reflection on modelling and examination of paramagnetic molecules for magnetic storage and molecular spintronics
In celebration of our 15th anniversary and some of our most popular articles, Mihail Atanasov and Frank Neese reflect on the modelling and examination of paramagnetic molecules, building on two papers in Chemical Science: https://doi.org/10.1039/C2SC20801F & https://doi.org/10.1039/C2SC21394J.
Chem. Sci., 2025,16, 18985-18989
https://doi.org/10.1039/D5SC90219C
About this collection
This specially curated collection highlights some of our most popular articles from 2025 in the wider area of theoretical and computational chemistry.
The collection presents some outstanding contributions on the use of computational tools for predicting regioselectivity, aromaticity through quantum tunnelling, and a compelling case for moving beyond the allowed and forbidden classification of organic reactions.
As with all Chemical Science articles, they are all completely free to access and read. We hope you enjoy browsing through this collection!