Justyna
Kulig
a,
Robert C.
Simon‡
ab,
Christopher A.
Rose
c,
Syed Masood
Husain
d,
Matthias
Häckh
d,
Steffen
Lüdeke
d,
Kirsten
Zeitler
c,
Wolfgang
Kroutil
b,
Martina
Pohl
a and
Dörte
Rother
*a
aInstitute of Bio- and Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany. E-mail: do.rother@fz-juelich.de; Fax: +49 2461-613870; Tel: +49 2461-616772
bInstitute of Chemistry, Organic and Bioorganic Chemistry, University of Graz, Heinrichstrasse 28, 8010 Graz, Austria
cInstitute of Organic Chemistry, University of Regensburg, Universitätsstrasse 31, 93053 Regensburg, Germany
dInstitute of Pharmaceutical Sciences, University of Freiburg, Albertstrasse 25, 79104 Freiburg, Germany
First published on 27th March 2012
Although biotransformations implementing alcohol dehydrogenases (ADHs) are widespread, enzymes which catalyse the reduction and oxidation of sterically demanding substrates, especially 2-hydroxy ketones, are still rare. To fill this gap eight ADHs were investigated concerning their potential to reduce bulky 2-hydroxy ketones. All of these enzymes showed good activities along with excellent enantio- (ee > 99%) and diastereoselectivities (de > 99%). Due to their differences in substrate preferences and stereoselectivity a broad range of diastereomerically pure 1,2-diols is now accessible via biotransformation. Best results were obtained using the alcohol dehydrogenase from Ralstonia sp. (Cupriavidus sp.) (RADH), which showed a broad substrate range, especially for sterically demanding compounds. Araliphatic 2-hydroxy ketones, like (R)-2-hydroxy-1-phenylpropan-1-one ((R)-2-HPP), were reduced much faster than aliphatic or aromatic aldehydes (e.g. benzaldehyde) under the applied conditions. Additionally (R)- as well as (S)-2-hydroxy ketones were converted with high diastereoselectivities (de > 99%). RADH, which was up to now only studied as a whole cell biocatalyst overexpressed in E. coli, was purified and thoroughly characterised concerning its catalytic properties.
One powerful approach toward chiral 1,2-diols is the reduction of the prochiral keto group of 2-hydroxy ketones via NAD(P)H-dependent oxidoreductases. The reduction of small and small-bulky 2-hydroxy ketones, such as (R)- and (S)-2-hydroxy-1-phenylpropan-1-one (2-HPP, 9), using alcohol dehydrogenases from Lactobacillus brevis (LBADH) and Thermoanaerobacter sp. (ADHT) has already been described earlier.7,8 However, there is still a gap of enzymes accepting bulky-bulky substrates which has to be filled. Bulky-bulky3 2-hydroxy ketones are defined as 2-hydroxy ketones possessing two substituents which are larger than ethyl, azido-, cyano-, or halomethyl groups. Recently, the biocatalytic reduction of bulky-bulky 2-hydroxy ketones such as methoxy-substituted (R)-2-HPP and benzoin derivatives was described using whole cells of Pichia glucozyma.9 Unfortunately, the respective enzyme(s) responsible for this reaction is/are not yet known.
An alcohol dehydrogenase identified from Ralstonia sp. DSM 6428 (also known as Cupriavidus sp. DSM 6428) has earlier been described by Kroutil's group as a suitable enzyme for the reduction of bulky-bulky ketones by whole cell biotransformations.3 Motivated by these results, we started a broader screening of available ADHs concerning their activity towards various 2-hydroxy ketones, which was initially performed using crude extracts of recombinant E. coli cells overexpressing the respective enzymes: alcohol dehydrogenases from Thermoanaerobacter sp. (ADHT), Flavobacterium frigidimaris (FADH), horse liver (HLADH), Lactobacillus brevis (LBADH), Ralstonia sp. (RADH), Sphingobium yanoikuyae (SADH), Thermus sp. (TADH), and carbonyl reductase from Candida parapsilosis (CPCR). Among these ADHT, LBADH and RADH showed promising activity towards 2-hydroxy ketones, with RADH being most active towards bulky-bulky 2-hydroxy ketones. Therefore its high potential for the synthesis of chiral diols was studied in more detail.
The biocatalytic syntheses of 2-hydroxy ketones 15–17, 29–30 and 31 were conducted as previously described.19–22
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| Substrate | c/mM | Specific activity/U mg−1 | ||
|---|---|---|---|---|
| ADHT | LBADH | RADH | ||
| Aldehydes | ||||
|
10 | 6.0 ± 0.3 | 109.8 ± 3.1 | n.a. |
|
10 | 5.9 ± 0.2 | 8.0 ± 0.1 | 3.0 ± 0.1 |
|
10 | 7.7 ± 0.2 | 4.2 ± 0.0 | 4.1 ± 0.0 |
| Ketones | ||||
|
10 | 7.7 ± 0.2 | 89.6 ± 1.0 | 2.4 ± 0.0 |
| 2-Hydroxy ketones: aliphatic | ||||
|
10 | 18.1 ± 0.1 | 127.8 ± 3.7 | 0.5 ± 0.0 |
|
10 | 13.3 ± 0.3 | 36.7 ± 0.4 | 6.6 ± 0.1 |
|
10 | 6.4 ± 0.3 | 66.1 ± 0.9 | 4.8 ± 0.1 |
| 2-Hydroxy ketones: 2-HPP and derivatives thereof | ||||
|
10 | 4.2 ± 0.1 | 28.7 ± 0.2 | 5.6 ± 0.1 |
|
10 | 0.8 ± 0.0 | 3.5 ± 0.0 | 112.2 ± 7.2 |
|
10 | 2.2 ± 0.2 | 3.0 ± 0.0 | 239.9 ± 7.6 |
|
10 | 2.9 ± 0.0 | 3.2 ± 0.1 | 10.0 ± 0.1 |
|
10 | 4.4 ± 0.5 | 0.3 ± 0.0 | 21.5 ± 0.4 |
|
5 | 0.7 ± 0.2 | 0.0 ± 0.0 | 4.1 ± 0.1 |
| 2-Hydroxy ketones: PAC | ||||
|
10 | 3.5 ± 0.0 | 20.4 ± 0.2 | 36.3 ± 1.8 |
| 2-Hydroxy ketones: benzoin and α-pyridoin | ||||
|
10 | 0.1 ± 0.0 | n.d. | n.a. |
|
10 | 0.5 ± 0.0 | 0.1 ± 0.0 | 0.6 ± 0.0 |
| Substrate | Oxidoreductase | ||
|---|---|---|---|
| ADHT | LBADH | RADH | |
| ee—enantiomeric excess, de—diastereomeric excess, dr—diastereomeric ratio, n.d.—not determined.a Employing crude cell extracts with overexpressed ADHs.b Employing purified RADH.c de determined by 1H NMR measurement.d Absolute configuration confirmed by VCD studies. | |||
|
(R) | (S) | (R) |
| dr (syn/anti) | dr (syn/anti) | dr (syn/anti) | |
23.6 : 1a |
1 : 1a |
2 : 1a |
|
4 : 1b |
|||
|
(R) | (S) | (R) |
| de > 99% | de > 99% | de > 99% | |
| (syn)a | (anti)a | (syn)a,b | |
|
(R) | (S) | (R) |
| de > 99% | de > 99% | de > 99% | |
| (anti)a | (syn)a | (anti)a,b | |
|
(R) | (S) | (R) |
| ee > 99%a | ee > 99%a | ee > 99%a,b | |
|
(S) | (R) | (S) |
| de > 99% | de 89% | de > 99% | |
| (anti)a | (syn)a | (anti)a,b | |
|
n.d. | n.d. | (R) |
| de > 99% | |||
| (syn)b,c,d | |||
|
n.d. | n.d. | (R) |
| de 87% | |||
| (anti)b,c | |||
| Substrate | c/mM | Specific activity/U mg−1 |
|---|---|---|
| a Absorption limitations occurred already at 1 mM of substrate concentration. b Saturated substrate solution, diluted two-fold because of absorption limitations. | ||
| Acyloins | ||
|
10 | 1.1 ± 0.0 |
|
10 | 9.8 ± 0.0 |
|
10 | 5.1 ± 0.1 |
|
10 | 0.8 ± 0.1 |
| PAC and derivatives thereof | ||
|
10 | 49.3 ± 1.1 |
|
10 | 61.9 ± 1.9 |
|
10 | 19.0 ± 0.5 |
|
10 | 60.0 ± 2.4 |
|
Saturated | 0.7 ± 0.1 |
|
Saturated | 0.9 ± 0.0 |
|
Saturated | 0.1 ± 0.1 |
|
1 | 0.2 ± 0.0 |
|
5 | 0.2 ± 0.0 |
|
1 | 0.2 ± 0.1 |
|
5 | 0.5 ± 0.0 |
|
5 | 1.1 ± 0.1 |
|
1 | 0.3 ± 0.0 |
|
Saturated | 0.6 ± 0.2 |
| 2-HPP and derivatives thereof | ||
|
10 | 4.3 ± 0.1 |
|
10 | 259.2 ± 3.5 |
|
10 | 362.6 ± 1.9 |
|
10 | 17.1 ± 0.3 |
|
10 | 44.4 ± 0.5 |
|
10 | 138.7 ± 1.8 |
|
10 | 17.4 ± 0.2 |
|
10 | 0.6 ± 0.0 |
|
10 | 0.2 ± 0.1 |
|
10a | Absorption limitation |
|
5 | 6.2 ± 0.3 |
| Other substrates | ||
|
Saturated | 0.1 ± 0.0 |
|
Saturated | 0.00 |
|
Saturated | 0.00 |
|
Saturatedb | 0.4 ± 0.0 |
|
Saturated | 0.3 ± 0.0 |
In order to assign the absolute configuration of the enzymatically obtained 1,2-diols, compounds 36–38 were chemically synthesised as described below.
1H-NMR and 13C-NMR spectra were recorded on a Bruker Advance-DRX 600 spectrometer in CDCl3 with TMS (Me4Si) as the internal standard. Chemical shifts are given in ppm relative to the Me4Si (1H, Me4Si = 0 ppm) or relative to the resonance of the solvent (13C, CDCl3 = 77.2 ppm). GC-MS analysis was performed on a Varian CP-3800/Saturn 2000 instrument equipped with HP-5 column (30 m × 0.32 mm × 0.25 μm). The sample analysis (1 μL) was carried out in following program: injection temperature: 60 °C and kept constant for 3 min, then in a slope 20.0 °C min−1 temperature was increased to 180 °C and subsequently kept constant for 5 min. Optical rotation was measured at 20 °C on a Jasco P-2000 polarimeter using the sodium D-line.
syn:29,301H NMR (600 MHz, CDCl3): 1.03 (d, 3JMe,2 = 6.3 Hz, 3 H, CH3), 2.57 (brd, 3JOH,2 = 3.1 Hz, 1 H, OH), 2.63 (brd, 3JOH,1 = 3.1 Hz, 1 H, OH), 3.80 (s, 3 H, OMe), 3.82 (ddq, 3J2,1 = 7.2 Hz, 3J2,Me = 6.2 Hz, 3J2,OH = 3.0 Hz, 1H, 2-H), 4.31 (d, 3J1,2 = 7.6 Hz, 1H, 1-H), 6.88 (d,
, 2H, arom.-H), 7.25 (d,
, 2 H, arom.-H) ppm. 13C-NMR (151 MHz, CDCl3): 18.8 (C-3), 55.3 (OMe), 72.3 (C-2), 79.2 (C-1), 113.9 (arom.-CH), 128.0 (arom.-CH), 133.2 (arom.-Cipso), 159.5 (arom.-Cipso) ppm.
anti:311H NMR (600 MHz, CDCl3): 1.09 (d, 3JMe,2 = 6.4 Hz, 3 H, CH3), 2.50 (brs, 1 H, OH), 2.77 (brs, 1 H, OH), 3.80 (s, 3 H, OMe), 3.97 (ddq, 3J2,1 = 4.4 Hz, 3J2,Me = 6.4 Hz, 3J2,OH = 10.8 Hz, 1 H, 2-H), 4.59 (d, 3J1,2 = 4.5 Hz, 1 H, 1-H), 6.89 (d,
, 1 H, arom.-H), 7.28 (d,
, 1 H, arom.-H) ppm. 13C-NMR (151 MHz, CDCl3): 17.5 (C-3), 55.3 (OMe), 71.3 (C-2), 77.3 (C-1), 113.8 (arom.-CH), 127.9 (arom.-CH), 132.5 (arom.-Cipso), 159.3 (arom.-Cipso) ppm.
The first tests using crude cell extracts demonstrated the high potential of the three selected enzymes for the reduction of a broad range of 2-hydroxy ketones.
Almost every substrate could be reduced by at least one of the enzymes. ADHT and LBADH showed higher activities towards aliphatic substrates, whereas RADH clearly preferred sterically demanding mixed aromatic–aliphatic 2-hydroxy ketones. Also the sterically hindered substrate 10 was reduced by RADH effectively. Since the kinetic parameters for the reduction of the 2-hydroxy ketones are not yet known, the activities cannot be compared in terms of maximal velocities; they could be significantly higher at different substrate concentrations.
Conclusively, these initial results suggested that a broad range of chiral 1,2-diols was accessible by these three enzymes. In the following their stereoselectivity was studied for selected reactions.
The only achiral substrate 10 was reduced by all three oxidoreductases with high stereoselectivity. Thereby LBADH yielded the (S)-enantiomer, while the other two gave the (R)-enantiomer with an ee of >99%.
The other tested substrates in Table 3 already contain one chiral centre ((R)-9, (S)-9, (R)-12, (R)-28 and (S)-28). This chiral centre is maintained during biotransformation in all cases and has no visible chiral induction on the formation of the second chiral centre, except substrate (S)-28, in which the diastereomeric excess drops to 87%. Under the applied reaction conditions we could not observe any racemisation or tautomerisation of the 2-hydroxy ketones. This is a clear advantage of the enzymatic approach. Almost all of the tested substrates were reduced with very high stereoselectivity (ee and de > 99%).
Conclusively, syn- and anti-1,2-diols with high diastereoselectivity were obtained by the appropriate choice of the biocatalyst. The diastereomeric ratio of the syn/anti-diols provided information about the enzyme's selectivity towards the two respective enantiomers of the substrate. This was specifically tested with both enantiomers of 2-HPP (9), which were accepted by all tested enzymes and reduced selectively. Whereas LBADH reduced both enantiomers with the same velocity under the applied conditions, RADH and ADHT preferred the (R)-enantiomer of 9 yielding diastereomeric ratios (syn/anti) of 2
:
1 (RADH) and 23.6
:
1 (ADHT), respectively.
LBADH showed inverse stereoselectivity compared to the other tested oxidoreductases. Interestingly for all of these enzymes, the location of the already existing chiral centre in two similar 2-hydroxy ketones resulted in the formation of inverse product stereoselectivities, e.g. (R)-PAC ((R)-12) and (R)-HPP ((R)-9) were reduced to the respective anti- and syn-diols. With ADHT and RADH (R)-2-HPP ((R)-9) was reduced (R)-selectively to the syn-product (1R,2R)-36, while (R)-PAC ((R)-12) was reduced (S)-selectively yielding the anti-product (1R,2S)-36. Besides, LBADH catalysed also the formation of the syn-diol (1R,2R)-36 by (R)-selective reduction of (R)-PAC ((R)-12) (Table 3). This was caused by the orientation of the substrate in the enzymes' active sites, where the cofactor's hydride ion attack could occur either from the si-face of the reduced molecule or from the re-face, depending on the enzyme.32,33
These data demonstrate that at least all four different stereoisomers of the methyl-phenylpropanediols are now accessible with the three tested ADHs, depending on the chirality of the starting compound and the stereoselectivity of the enzyme.
A screening of 2-hydroxy ketones with isolated RADH confirmed the trend already observed with crude cell extracts, demonstrating that this enzyme was extremely active towards the reduction of bulky-bulky compounds. The highest activity among the tested substrates was found with (R)-2-HPP ((R)-9), which was reduced to the respective vicinal 1,2-diol with about 360 U mg−1, followed by racemic 2-HPP (rac-9), with a specific activity of 260 U mg−1, and (R)-p-methoxy-2-HPP ((R)-28) with about 140 U mg−1. However, these activities could not be compared in absolute numbers as they do not necessarily represent the maximal velocity.
Regarding two very similar molecules such as (R)-2-HPP ((R)-9) and (R)-PAC ((R)-12), the relative position of the hydroxyl- and the keto group has significant impact on RADH's activity, since (R)-2-HPP ((R)-9) is about 6-fold faster converted to the respective 1,2-diol than (R)-PAC ((R)-12). This goes along with data obtained with the crude cell extract where a similar difference (6.5-fold) was observed (Table 2).
Our results demonstrate that RADH prefers 2-HPP-derivatives as excellent substrates for reductions. Although PAC and its derivatives are reduced with good activities as well, the reduction of the keto function next to the aromatic ring seems to be preferred over the reduction of the keto group next to the aliphatic side chain. Additionally, although the activity towards the sterically extremely demanding bulky-bulky substrates 14 and 34 is rather low, it is worth pointing out that they are converted at all.
As already visible with the crude cell extract, the chiral centre of chiral substrates has a strong influence on the specific activity of the RADH. For example (S)-p-methoxy-2-HPP ((S)-28) is reduced with a specific activity of 17 U mg−1 while the (R)-enantiomer ((R)-28) is reduced 8-fold faster (139 U mg−1). The same holds for (R)-2-HPP ((R)-9) and (S)-2-HPP ((S)-9), supporting the results obtained with crude cell extracts (Table 2). An inverse situation was observed in the case of 1-hydroxy-1-phenylbutan-2-one ((R)-17, (S)-17), where the (S)-enantiomer ((S)-17) is reduced 3-fold faster than the (R)-enantiomer ((R)-17).
The enzyme exhibits severe activity differences towards substrates not only with respect to the position of the carbonyl group but also regarding the configuration of the adjacent asymmetric chiral carbon atom.
Conclusively not only the position of the hydroxyl group to be reduced has a strong influence on the enzyme's activity but also the configuration of the asymmetric carbon atom is decisive.
Therewith the results obtained with the purified enzyme confirm the data obtained with crude cell extracts (Table 3). The only difference was a shift of the ratio of syn and anti diol formation from racemic 2-HPP from 2
:
1 (crude cell extract) to 4
:
1 (purified RADH).
RADH was isolated for the first time and a protocol to keep the enzyme stable in buffer was established. The reduction activity of the isolated enzyme was studied with 34 different 2-hydroxy ketones (Table 4), where only two (benzoin 13 and 2-(4-bromophenyl)-1-cyclohexyl-2-hydroxyethanone 33) did not show any activity at all, which might be due to the low solubility of these compounds. Highest activities were observed with (R)-2-HPP ((R)-9) and its 4-methoxy derivative ((R)-28) with a methyl group next to the prochiral carbonyl group.
In our ongoing studies RADH is evaluated in biotransformations in order to elucidate the stability of the enzyme in a purified form and to identify optimal reaction parameters.
Footnotes |
| † Electronic supplementary information (ESI) available: The vector maps of RADH and SADH, cloning, expression and purification procedures of recombinant ADHs, tables with all crude extract data as well as infrared and vibrational circular dichroism spectra are presented. See DOI: 10.1039/c2cy20120h |
| ‡ Present address: Institute of Chemistry, Organic and Bioorganic Chemistry, University of Graz, Heinrichstrasse 28, 8010 Graz, Austria |
| This journal is © The Royal Society of Chemistry 2012 |