Open Access Article
Fannie
Burgevin
a,
Alexia
Hapeshi
a,
Ji-Inn
Song
a,
Marta
Omedes-Pujol
b,
Annette
Christie
b,
Christopher
Lindsay
b and
Sébastien
Perrier
*acd
aChemistry Department, University of Warwick, Library Road, CV4 7AL, Coventry, UK. E-mail: s.perrier@warwick.ac.uk
bFormulation Technology Group, Syngenta, Jealotts Hill International Research Centre, Bracknell, Berkshire RG42 6EY, UK
cWarwick Medical School, University of Warwick, Coventry CV4 7AL, UK
dMonash Institute of Pharmaceutical Sciences, Monash University (Parkville Campus), 399 Royal Parade, Parkville, Victoria 3152, Australia
First published on 3rd July 2023
Cationic polymers can be used as vectors to transport and efficiently protect nucleic acids. In this work we describe the synthesis of dense star-like polymers of 2-dimethylaminoethyl acrylate (DMAEA) and 2-dimethylaminoethyl methacrylate (DMAEMA) and the hydrolysis of the DMAEA units side chains for the complexation and release of nucleic acids. The successful chain extension of p(DMAEA80-stat-DMAEMA20) with acrylamide monomers allowed the preparation of stars by the arm-first approach. Soluble stars with a high number of well-defined arms (Narm ∼55–100) were obtained with the introduction of non-cationic N-acrylmorpholine (NAM) prior to the crosslinking step. The influence of the architecture on the hydrolysis of the DMAEA units side chains was studied, with only small differences observed compared to the corresponding arm. All stars were able to complex a large (10
000 basepairs) plasmid DNA encoding for green fluorescent protein (GFP), and transfect HEK293T cells, with the larger, more charged star structure leading to higher transfection efficiency. Although the transfection efficiency is lower than that of the gold standard polyethylenimine (PEI), the stars much lower toxicity, at concentrations as high as 1 mg mL−1, make them viable transfection agents.
This high toxicity has led to the use of alternative polymers to PEI, including chitosan,15 poly(2-dimethylamino ethyl methacrylate) (PDMAEMA), poly-L-lysine (PLL)16 and poly(N,N-dimethylaminopropyl acrylamide) (PDMAPAAm).17 In particular, PDMAEMA polymers have received great interest in the literature,18–20 due to their reduced toxicity compared to PEI and comparable transfection efficiency.21,22 However, these polymers do not have a release mechanism for their nucleotides payload, and thus have limited efficiency. A route to payload release is to use cationic moieties that can be cleaved in physiological media,23–29 a feature found in poly(acrylate)s such as poly(2-dimethylaminoethyl acrylate) (pDMAEA), where the charged pendant moiety can be hydrolysed from the polymer backbone.28–32 pDMAEA has been shown to bind effectively to RNA and DNA, and the release is triggered via hydrolysis of its positively charged side groups complexed to the nucleotides payload.28,29,32–34 In addition, the hydrolysis leads to negatively charged polymers (a process termed charge-shifting) which enable the release of the negatively charged RNA or DNA via electrostatic repulsion.25,26,34 However, in order to control the release process, the polyplex has to be stable over a period of time to enable transfection, followed by degradation/hydrolysis inside the cell to release the nucleotides. A downside of this approach is the fast hydrolysis of pDMAEA, which occur in time period varying from 1 to 10 hours.28 Our group recently showed that by copoluymerising DMAEA and DMAEMA, which is non-hydrolysable the hydrolysis of the resulting copolymer, and therefore release of the genetic material, can be controlled and delayed.25
Polymer architecture and molecular weight have shown to have an impact on gene delivery efficiency.35–37 High molecular weight polymers tend to show better DNA/RNA binding, cellular uptake and transfection efficiency whereas lower molecular weight polymers show less cytotoxicity.36 Dense structure such as branched star-shaped polymers have shown promising properties, attributed to the spherical shape of the resulting polyplex and the better and stronger condensation of DNA.20,21,25,26,33,38,39 Such structures can be synthesised efficiently via the arm first approach: linear polymeric arms are first synthesised using a controlled polymerisation technique such as reversible addition–fragmentation transfer (RAFT), and then a bifunctional crosslinker is introduced to covalently interconnect the end of the arms to form star-shaped structure.19,40–42 The synthesis of well defined structures have been demonstrated in the literature.43,44 Although the literature shows a few examples of DMAEMA-based star polymers,19,20,45,46 there are far fewer examples of polymer architectures based on the acrylate version DMAEA. For instance, RAFT has been employed to make linear chains with good control over a range of molecular weight from 3 000 g mol−1 to up to 8 600 g mol−1 with dispersity ranging from 1.17 to 1.26 at higher molecular weight.23,28 More recently Ros et al. reported the polymerisation of DMAEA using RAFT in a mixture of dioxane and water at pH 3–4 resulting in a higher molecular weight polymer (31 200 g mol−1, Đ = 1.25).47 Liao et al. synthesised 4-arm stars of DMAEA using tetrafunctional RAFT agent and used these materials to complex and delivery siRNA.33 Cook et al. synthesised branched copolymers of DMAEA and DMAEMA, obtaining polymer with molecular weight ranging from 17
000 to 27
000 g mol−1 but the uncontrolled nature of the reaction led to structures with very broad dispersity (Đ = 3.1–8.2).25 Similarly, Rolph et al. reported the synthesis of DMAEA core-crosslinked stars by chain extending linear homopolymers poly(ethylene glycol monomethyl ether acrylate) (pEGA) or poly(2-hydroxyethyl acrylate) with DMAEA and a divinyl crosslinker (Đ ∼2.2–2.9).48 Nitroxide-mediated polymerisation (NMP) has also been used to obtain linear chain with molecular weight up to 13
000 g mol−1 and dispersities around 1.5.49 Finally, Whitfield et al. used Cu(0)-mediated reversible deactivation radical polymerisation to make stars using multifunctional initiator with good control (Đ ∼1.1), by keeping conversion low (around 30%) in order to circumvent termination and side reactions.50 Interestingly, block copolymers of pDMAEA have only been reported using Cu(0)-mediated RDRP,50 with block of DMAEA preferencially incorporated as the final block. For instance, Zhao et al. chain extended PDMS to obtain amphiphilic block copolymers that self-assemble in aqueous solutions.51 Tran et al. made copolymers with a first block of poly(dimethyl acrylate) and a second block of statistically copolymerised DMAEA, N-isopropylacrylamide and butyl acrylate to form thermoresponsive micelles nanoparticles.52 There is however no example of the chain extension of pDMAEA for the production of star copolymers.
In this paper, we investigate the synthesis of dense star-shaped copolymers with arms composed of 80% DMAEA and 20% DMAEMA and their use for nucleic acid complexation. The star are obtained by the arm-first approach using RAFT polymerisation, where linear polymeric chains are first formed, then interconnected covalently by introduction of a crosslinker.40–42 Chain extension of p(DMAEA-stat-DMAEMA) was first investigated, showing acrylamides are the most suitable to obtain a good chain extension. The dense stars were characterised by 1H NMR and DMF-GPC with triple detection and their hydrolysis was compared to linear copolymer equivalents. Finally, their potential for complexing and delivering a large (10
000 basepairs) plasmid DNA (pDNA) encoding green fluorescent protein was assessed.
Gel permeation chromatography (GPC) was performed in DMF, an Agilent infinity II MDS instrument equipped with differential refractive index (DRI), viscometry (VS), dual angles light scattering (LS) and variable wavelength UV detectors was utilised. The system was equipped with 2× PLgel Mixed D columns (300 × 7.5 mm) and PLgel 5 μm guard column. The eluent was DMF with 5 mmol NH4BF4 additive. Samples were run at 1 mL min−1 at 50 °C. When using DRI detection for lower molecular weight polymers, poly(methyl methacrylate) standards (Agilent EasyVials) were used for calibration between 955
000–550 g mol−1. Analyte samples were filtered through a nylon membrane with 0.22 μm pore size before injection. Respectively, experimental molar mass (Mn,GPC) and dispersity (Đ) values of synthesised polymers were determined by conventional calibration or triple detection using Agilent GPC/SEC software.
Proton nuclear magnetic resonance spectra (1H NMR) were recorded on a Bruker Advance 300 or 400 (300 or 400 MHz) at 27 °C using CDCl3 or D2O as solvents. Chemical shift values (δ) reported in ppm, and the residual proton signal of the solvent used as internal standard.
The hydrolysis study of the copolymers were performed in NMR tubes at 10 mg mL−1 in D2O. The reaction was followed by 1H NMR spectroscopy.
000 cells per well and left to incubate for 24 hours at 37 °C in DMEM. Polymers were dissolved in serum free DMEM at 1.1 mg mL−1 and filtered through 0.22 μm filter. FBS was added and the concentration of polymer adjusted to 1 mg mL−1. The media was replaced by the media containing the polymer, serial dilution was used to incubate the cells with polymers of different concentrations and incubated for 18 hours at 37 °C. After dry exposure, cell viability was measured by using XTT assay. Cell viability was determined in triplicate in three independent sets of experiments and their standard deviation was calculated.
![]() | (1) |
log
M out of absolute molecular weight squared determined by light scattering against retention time with eqn (2) below:![]() | (2) |
100 g mol−1, Đ = 1.02). 1H NMR (400 MHz, CDCl3): δ (ppm) = 4.1 (–CO–O–CH2–CH2–), 2.5 ((–CO–O–CH2–CH2–), 2.3 (–C–(CH3)2 + –CH(CH2–)(CO–O–)), 2.0–1.2 (backbone).
300 g mol−1, Đ = 1.09). 1H NMR (400 MHz, CDCl3): δ (ppm) = 4.1–3.2 (–CO–O–CH2–CH2– from DMAEA and DMAEMA + –O–CH2–CH2–N–), 2.2–2.8 ((–CO–O–CH2–CH2– from DMAEA and DMAEMA + –CH2–CH–CO– from NAM), 2.3–1.5 (–C–(CH3)2 + –CH(CH2–)(CO–O–) from DMAEA and DMAEMA + –CH2–CH– NAM backbone), 2.0–1.2 (backbone).
500 g mol−1, Đ = 1.11). 1H NMR (400 MHz, CDCl3): δ (ppm) = 4.1–3.2 (–CO–O–CH2–CH2– from DMAEA and DMAEMA + –O–CH2–CH2–N–), 2.2–2.8 ((–CO–O–CH2–CH2– from DMAEA and DMAEMA + –CH2–CH–CO– from NAM), 2.3–1.5 (–C–(CH3)2 + –CH(CH2–)(CO–O–) from DMAEA and DMAEMA + –CH2–CH– NAM backbone), 2.0–1.2 (backbone).
900 g mol−1, Đ = 2.26). 1H NMR (400 MHz, CDCl3): δ (ppm) = 4.1–3.2 (–CO–O–CH2–CH2– from DMAEA and DMAEMA + –O–CH2–CH2–N–), 2.2–2.8 ((–CO–O–CH2–CH2– from DMAEA and DMAEMA + –CH2–CH–CO– from NAM), 2.3–1.5 (–C–(CH3)2 + –CH(CH2–)(CO–O–) from DMAEA and DMAEMA + –CH2–CH– NAM backbone + bisacrylamide), 2.0–1.2 (backbone).
The synthesis of stars by the arm-first approach requires an efficient chain extension, to ensure arm crosslinking and to minimise the quantity of unattached linear chains.44 A range of difunctional crosslinking monomers are available, and the choice of monomer family can have a large impact on chain extension efficiency due to the RAFT fragmentation mechanism. An acrylate derivative was first considered to match the reactivity of DMAEA.25,48 A preliminary test was performed to verify that an acrylate functionality is suitable for the chain extension: a p(DMAEA-stat-DMAEMA) copolymer was chain extended with methyl acrylate (MA) ([M]/[mCTA] = 50) but showed poor reinitiation, and GPC analysis revealed a limited fraction of the first block shifted to higher molecular weight (Fig. 1). As the reinitiation with an acrylate was not efficient, an extension of the copolymer with an acrylamide derivative – N-acryloylmorpholine (NAM) was used as model monomer – was performed to assess mCTA reactivity. The reaction reached almost full NAM conversion, as shown by 1H NMR with almost total disappearance of the vinyl peaks at 6.5, 6.3 and 5.7 ppm. The GPC traces (Fig. 1) showed a clear shift of molecular weight distribution to higher molecular weights, suggesting effective chain extension, although a small amount of macroRAFT agent still did not reinitiate. From these results, acrylamide-based crosslinkers were identified as the most suitable choice for chain extension.
Methylenebis(acrylamide) was chosen as crosslinker (CL) to synthesise the stars by the arm-first approach. A purified linear p(DMAEA20-stat-DMAEMA5-b-NAM12) copolymer (Mn = 11
100 g mol−1) previously synthesised was used as mCTA for chain extension. A block of NAM was added in a second step in order to obtain soluble stars after purification. Without the addition of NAM before crosslinking, the stars obtained after purification were not soluble, presumably due to the presence of charges. ACVA was used as initiator (I) at 70 °C over 3 hours (Scheme 1) and a [CL]/[mCTA] ratio of 3, a [CTA]/[I] ratio of 20 and a crosslinker concentration of 0.2 M were chosen for this reaction. The chain extension was followed by 1H NMR spectroscopy and GPC (Fig. 2a). 1H NMR showed that 95% of the double bonds of the crosslinker were consumed in 3 hours (Table 1), whilst GPC clearly provided evidence of the arms crosslinking into star copolymers, with the formation of a higher molecular weight species increasing in size over the course of the reaction. Star copolymers were obtained with a dispersity of 1.62 and molecular weight of 119
900 g mol−1. Stars were then precipitated in a mixture of 70% cold diethyl ether and 30% dichloromethane, to selectively remove the unreacted arms, and dried (Fig. 2b). Similarly, stars with smaller arms (half the size) were synthesised (Star 2). Finally, in order to make the synthesis simpler by reducing the number of steps, NAM was copolymerised with DMAEA and DMAEMA in one-step to yield a statistical copolymer, rather than a block as previously described (Star 3, Table 2).
![]() | ||
| Scheme 1 Synthesis of p(DMAEA-stat-DMAEMA)25-b-NAM15-b-CL3 star copolymer by the arm-first approach. | ||
| M n,th (g mol−1) | Conv.a (%) | M n, GPC (g mol−1) | M w, GPC (g mol−1) | Đ | A | R H (nm) | N arm | Arm incorp. (%) | |
|---|---|---|---|---|---|---|---|---|---|
| a Monomer (DMAEA/DMAEMA, NAM or crosslinker) conversions determined by 1H NMR. b Molar mass were determined by DMF-GPC, absolute molecular weight from light scattering detection, α = Kuhn–Mark–Houwink–Sakurada parameter from viscometry detector, Narm = number of arms per star, arm incorporation is calculated from RI detector. | |||||||||
| L (DMAEA-stat-DMAEMA)25 | 3500 | 91 | 11 100 |
11 300 |
1.02 | — | — | — | — |
| L (DMAEA-s-DMAEMA)25-b-NAM12 | 5500 | 95 | 15 300 |
16 600 |
1.09 | 0.41 | — | — | — |
| S (DMAEA-s-DMAEMA)25-b-NAM12 – Star 1 | — | 99 | 383 900 |
868 800 |
2.26 | 0.31 | 11 | 100 | 75 |
| L (DMAEA-stat-DMAEMA)12 | 1800 | 89 | 9100 | 9900 | 1.09 | — | — | — | — |
| L (DMAEA-s-DMAEMA)12-b-NAM7 | 2800 | 97 | 6200 | 6500 | 1.06 | 0.35 | — | — | — |
| S (DMAEA-s-DMAEMA)12-b-NAM7 – Star 2 | — | 99 | 41 300 |
95 800 |
2.32 | 0.24 | 5.5 | 65 | 83 |
| L (DMAEA-s-DMAEMA-s-NAM)40 | 5600 | 91 | 12 500 |
13 900 |
1.11 | 0.55 | — | — | — |
| S (DMAEA-s-DMAEMA-s-NAM)40 – Star 3 | — | 98 | 228 800 |
380 800 |
1.66 | 0.28 | 10 | 55 | 50 |
| Parameters | Star 1 | Star 2 | Star 3 |
|---|---|---|---|
a Error values represent the standard error associated with the fitted values.
b
N
arms represents the number of arms within each star and was held constant throughout the fitting procedure based on the number of arms determined via GPC analyses.
c
g represents the number averaged radius of gyration of individual polymer chains within the star.
d
σ represents the standard deviation of the lognormal distribution in g.
|
|||
| I 0/cm−1 | 1.23 ± 0.01 | 1.13 ± 0.01 | 1.74 ± 0.02 |
| N arms | 100 | 65 | 55 |
g
/Å
|
77.3 ± 0.16 | 70.8 ± 0.21 | 97.9 ± 0.46 |
| σ | 0.22 ± 0.01 | 0.50 ± 0.01 | 0.59 ± 0.01 |
Stars were further characterised using SAXS and AFM. SAXS data were fitted to a polydisperse star polymer model (Fig. 3), which describes the scattering from linear Gaussian polymer chains crosslinked to a central core. The zero-angle intensity (I0) is proportional to the concentration and size of the individual stars. Other input parameters include the radius of gyration (Rg) of the individual polymer chains within the star, and the number of arms. Here, the number of arms was fixed according to the number of arms determined through GPC analysis. The Rg was fit to a lognormal distribution, where the number averaged Rg and the standard deviation were fitted parameters. The number average
g was calculated for the three stars (Table 3), Star 1 had a
g of 77 Å, while Star 3 with the same arm length had a
g of 98 Å but with a higher standard deviation (0.59). Star 1 was better defined with a standard deviation of 0.22 (Fig. 3b). This was supported by AFM images (Fig. 4), more aggregation could be observed with Star 3 whereas better defined spheres could be observed for Star 1. Star 2 had a smaller
g (71 Å) with a higher standard deviation of 0.50. This conclusion was confirmed by AFM, where small stars could be observed, forming large aggregates.
![]() | ||
| Fig. 4 AFM pictures of (a) Star 1, (b) Star 2 and (c) Star 3. The samples were prepared at 0.025 mg mL−1 onto freshly cleaved mica. | ||
The change from a linear to star structure was not expected to have significant influence on the hydrolysis, as indicated by previous research on branched architectures and stars with low number of arms.25,26,48 To confirm this, the hydrolysis of these structures was compared to the linear chains forming the star arms. Initially, all star copolymers hydrolysed quickly, exhibiting 30% hydrolysis in 2 days (Fig. 5b). Following this initial rapid phase, the rate of hydrolysis decreased, especially for the smaller star, Star 3, which continue to slowly hydrolyse from 33% at 2 days to 52% at 62 days. The star made of statistical DMAEA, DMAEMA and NAM arms reached 68% hydrolysis in 62 days. This might be due to the presence of the hydrophilic NAM units along the chains which improve accessibility of water molecules inside the dense structure. This was also observed by Gurnani et al., who noticed that increasing hydrophilicity by incorporating statistically hydroxyethyl acrylate (HEA) monomer led to faster hydrolysis of DMAEA.23 Compared to their arms, the hydrolysis of the stars was further slowed down and the final hydrolysis was lower, with hydrolysis reaching 56% and 52% for Star 1 and 2, respectively, whereas reaching 62% for both the arms. The accessibility to the reactive units and hydrophilicity of the polymer seems to influence the rate and extent of hydrolysis after the initial rapid period.
000 basepairs plasmid DNA (pDNA) expressing green fluorescent protein (GFP). The polyplexes were characterised by agarose gel electrophoresis and ethidium bromide displacement assays. By varying the ratio of nitrogen from the polymer to phosphorus from the nucleic acid (N/P ratio), the amount of polymer necessary to fully complex the nucleic acid can be determined. Complexation was performed with pDNA at N/P ratios ranging from 0 to 10. The three star copolymers seemed to be able to fully complex pDNA from a N/P ratio of 2 (Fig. 6). Smears can be observed on the gels at N/P 1, suggesting most pDNA was complexed to the polymers but some nucleic acids were still free.
![]() | ||
| Fig. 6 Agaraose gel electrophoresis pictures of complexation of pDNA with Star 1, 2 and 3 at N/P ratios of 0, 1, 2, 3, 4, 5, 6, 7 and 10. | ||
Ethidium bromide displacement assays were also performed to assess the strength of complexation between polymers and pDNA (Fig. 7). All compounds, including PEI, required much higher N/P ratio for displacing ethidium bromide. Displacement was at maximum at N/P ratio of 10 for all systems, with PEI displacing more pDNA (79% displacement) than the three stars. Star 1, which was designed as a larger star with dense cationic charge, seemed to bind more strongly to pDNA (over 40% displacement), than the smaller equivalent Star 2 (30% displacement) and Star 3, designed with a less dense cationic charge distribution, spaced out by the neutral NAM monomer (20% displacement). These results confirm the intuitive hypothesis that a more charged structure (Star 1) is more efficient at binding a nucleic acid, independently of its larger size.
![]() | ||
| Fig. 8 Toxicity of stars and linear copolymer of DMAEA and DMAEMA. Viability of HEK293T cells using XTT assay. | ||
Complexes of pDNA expressing GFP with Star 1, Star 2, Star 3 and p(DMAEA80-DMAEMA20) linear chain at N/P 20 were incubated with HEK293T cells. Cells were then incubated for 5 hours. After replacing the media, the cells were incubated for a further 48 hours to measure the transfection efficiency with these polymers compared to linear PEI (Fig. 9). Transfection efficiency is expressed as the percentage of cells expressing GFP, as measured by flow cytometry. Poor transfection rates were obtained for the stars compared to PEI, as a maximum of 7.6% transfection was measured for Star 1 and 5.1% for Star 2 and 1.6% for Star 3, while 31.8% was reached with linear PEI. However, the control linear copolymer of DMAEA and DMAEMA did not perform well either, as only 1.8% transfection was achieved. These results are in line with the ethidium bromide assays showing that the larger, more charged Star 1 was more efficient at binding pDNA.
![]() | ||
| Fig. 9 GFP pDNA transfection inHEK293T cell-line with polyplex (N/P 20) incubated for 48 hours growth. Samples were analysed by flow cytometry to determine fluorescence. | ||
Imaging using optical microscopy (see ESI†) showed large non-spherical aggregates (size of about 2 to 40 μm) corresponding to the polyplexes in these conditions and aggregation with the cells. In comparison, PEI-based polyplexes formed much smaller particles and caused less aggregation of the cells. Size is an important factor to obtain good transfection efficiency; usually particles under 500 nm result in efficient endocytosis mechanism.60,61 It is therefore possible that the size of the star-based polyplexes was responsible for the low transfection rates, with only small polyplexes being taken up by the cells. An alternative explanation for the poorer transfection efficiency when compared to that of PEI could be the lower cationic density of the pDMAEA based materials when compared to PEI. However, the higher cationic density of PEI is also source of very high cytotoxicity, as it disturbs the cell membrane, and limits the use of PEI for clinical applications. Therefore, although the star have lower transfection efficiency, their low toxicity still makes them viable materials as polyplexes.
000 basepairs) plasmid DNA expressing GFP, and were tested for transfection. The materials showed lower transfection efficiency than the gold standard PEI, presumably due to their lower positive charge density, but their much lower toxicity, as evidenced by XTT, still makes them a good alternative candidate for transfection applications.
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d3py00352c |
| This journal is © The Royal Society of Chemistry 2023 |