Vittorio
Cattaneo
,
Davide
Oldrini
,
Alessio
Corrado
,
Francesco
Berti
and
Roberto
Adamo
*
GSK Vaccines, Via Fiorentina 1, 53100 Siena, Italy. E-mail: roberto.x.adamo@gsk.com
First published on 29th April 2016
Orthogonal removal of naphthylmethyl (NAP) and anomeric O-p-methoxyphenyl (PMP) ethers using 2,3-dichloro-5,6-dicyano-1,4-benzoquinone and cerium(IV) ammonium nitrate, respectively, is described. These reactions were tested in the oligosaccharide assembly of biologically relevant motifs, such as α-D-Man-(1,3)-[α-D-(1,6)-Man]-α-D-Man, α-D-Fuc-(1,2)-α-D-Fuc and α-D-NeuNAc-(2,3)-β-D-Gal. The usefulness of these chemoselective deprotections was proven in the synthesis of high mannoses.
Electron-rich aromatic ethers are preferable to ester protecting groups as arm building blocks utilized in carbohydrate synthesis or when the control of stereoselectivity needs to exclude the anchimeric assistance, as in the formation of 1,2 cis-glycosidic linkages.2
In particular the NAP (2-naphthylmethyl) group is becoming very attractive for the possibility of easy removal in the presence of other aromatic protections, such as benzyl groups, by oxidative cleavage with DDQ (2,3-dichloro-5,6-dicyano-1,4-benzoquinone),3,4 catalytic hydrogenation5 or under acidic conditions.6
NAP and PMB (p-methoxybenzyl) can be orthogonally removed when used for the protection of non-anomeric hydroxyls by means of DDQ and CAN (cerium(IV) ammonium nitrate), respectively.7,8 NAP can be cleaved while leaving PMB intact by fine tuning Pd/C-catalyzed hydrogenolysis.5 Conversely, taking advantage of PMB liability under acidic conditions, this group can be removed without impacting NAP by means of HCl and HFIP (hexafluoro-2-propanol).6
Due to its acid sensitivity, PMB is rarely used to protect the anomeric positions, and PMP (p-methoxyphenyl) is generally preferred. After the release of the PMP protection, the anomeric hydroxyl is usually transformed into an appropriate leaving group, such as imidate or phosphate (Scheme 1), to obtain a glycosyl donor ready for glycosylation.9 Direct conversion of glycosyl p-methoxyphenol into the corresponding thiol donor has also been described.10 Hence, PMP is generally used to protect the C-1 position in acceptors that are converted into donors at a later stage of the synthetic strategy.
Here we show that NAP can be selectively removed in the presence of the PMP-protected anomeric position, and vice versa. Next, this feature was proven useful in oligosaccharide assembly.
Conversely, treatment of 1a with CAN provided the product 1c, where the two α- and β-anomeric positions appeared in the 1H NMR spectrum at 5.66 (J1,2 3.6 Hz) and 4.78 (J1,2 8.0 Hz), respectively.
To better explore these orthogonal deprotections, we synthesized the set of monosaccharides depicted in Table 1 (procedures are reported in the ESI†). Typically, treatment of the substrate with 5 equiv. of DDQ in a CH2Cl2–MeOH mixture for 5–6 h gave selective cleavage of the NAP protection in good yield. Of note, more prolonged reaction time (<6 h) for NAP removal in compound 7a led to the loss of the 4-O-benzyl group. This was confirmed by acetylation of the formed product and appearance in the 1H NMR spectrum of a triplet (J 9.8 Hz) at 5.48 ppm, which was unambiguously assigned to H-4.
| Entry | Substrate | NAP removal | PMP removal |
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| a For procedures see the Experimental section and the ESI. | |||
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| 3 |
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| 5 |
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| 6 |
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| 7 |
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| 8 |
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| 9 |
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| 10 |
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Occurrence of debenzylation with DDQ either in the presence or absence of water has been well documented,11 hence it needs to be taken into account as a possible side reaction.
For PMP removal, the use of 5–6 equiv. of CAN in 4
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1 acetonitrile–water for 6 h provided the 1-OH products in moderate to good yields for all the tested compounds (Table 1),12 without impairing the NAP protection. The moderate yield of some examples could be ascribed to the formation of a quinone adduct as a by-product, which has been reported in this reaction.13 As shown in Table 2 for compound 2a, the reaction occurred giving a higher yield when acetonitrile–water was used as the solvent mixture instead of acetone–water.
| Entry | Substrate | Conditions | Product | Yield |
|---|---|---|---|---|
| 1 | 2a | DDQ (3 eq.), CH2Cl2–MeOH, 6 h, r.t. | 2b | 35% |
| 2 | 2a | DDQ (5 eq.), CH2Cl2–MeOH, 6 h, r.t. | 2b | 78% |
| 3 | 2a | CAN (3 eq.), CH3CN–H2O, 6 h, r.t. | 2c | 28% |
| 4 | 2a | CAN (5 eq.), (CH3)2CO–H2O, 6 h, r.t. | 2c | 45% |
| 5 | 2a | CAN (5 eq.), CH3CN–H2O, 12 h, r.t. | 2c | 53% |
| 6 | 2a | CAN (5 eq.), CH3CN–H2O, 6 h, 0 °C | 2c | 68% |
| 7 | 7a | CAN (5 eq.), CH3CN–H2O, 6 h, r.t. | 7c | 15% |
| 8 | 7a | CAN (5 eq.), CH3CN–H2O, 6 h, 0 °C | 7c | 58% |
| 9 | 8a | CAN (5 eq.), CH3CN–H2O, 6 h, r.t. | 8c | 28% |
| 10 | 8a | CAN (5 eq.), CH3CN–H2O, 6 h, 0 °C | 8c | 77% |
Furthermore a reaction temperature of 0 °C avoided the formation of by-products. Particularly for substrates 7a and 8a concomitant loss of the NAP protection was observed as a side reaction (Table 2, entries 7–10). After acetylation of the by-products the 1H NMR signals related to the H-3 positions were shifted to a region between 5.45 and 5.30 ppm, clearly indicating that NAP deprotection had taken place.
Under the optimized conditions esters (Ac, Lev, Table 1, entries 1–4), benzyl ethers (Table 1, entries 5–9), benzylidene (Table 1, entries 4–6) and silyl groups (Table 1, entries 7 and 8) were untouched. In contrast, isopropylidene protection was proven labile with both DDQ and CAN because of the intrinsic acidity of the reagents (Table 1, entry 10), as manifested in the 1H NMR spectrum by the disappearance of the two signals related to the CH3 groups at 1.32 and 1.31 ppm, respectively.
Having established the orthogonality of the two protective groups, we assessed the applicability of the method to generate useful glycosyl donors.
We focused our attention to the 3-ONAP mannoside 7a, which was used as the acceptor to form the α-D-Man-(1,3)-[α-D-(1,6)-Man]-α-D-Man trisaccharide motif overexpressed in cancer cells,14–16 and which is contained in high mannoses, a family of oligomannose containing glycans highly expressed in mammalian cells and HIV.17–19 To obtain acceptor 11 with the two OH groups at positions 2 and 6 available for glycosylation, compound 7a was first subjected to TBDPS removal (Scheme 2) and then to NAP cleavage. The attempt to remove the TBDPS group from 7b caused migration of the 2-O-acetyl group to position 3 during the treatment with TBAF. Glycosylation of the acceptor with trichloroacetimidate 1220 in the presence of TMSOTf as the promoter afforded the desired trisaccharide 13 uneventfully.
Next, we utilized the fucoside building block 9c to generate the α-D-Fuc-(1,2)-α-D-Fuc motif, found in the Schistosoma mansoni complex glycan.21 After removing the PMP protection with CAN, trichloroacetimidate 14 was prepared in high yield (Scheme 2) by a classic reaction with Cl3CCN and DBU. TMSOTf promoted glycosylation of PMP protected acceptor 9b with the attained donor 14 provided disaccharide 15 with exclusive α-stereoselectivity, as proved by the J1,2 = 3.6 Hz at 4.89 ppm for the newly generated glycosidic linkage in the 1H NMR spectrum.22 The non-participating NAP group exhibited a favourable effect on the stereocontrol of the reaction.
In another example, 3-OH galactoside 5b prepared from 5a (Table 1) was used as the acceptor of the N-acetyloxazolidinone sialic donor 16 to synthesize the α-D-NeuNAc-(2,3)-β-D-Gal disaccharide 17 which is present in a variety of mammalian and microbial glycans (Scheme 2). The NIS–TfOH promoted reaction gave the α-anomer stereoselectively. The H-3e signal at 2.89 ppm in the 1H NMR spectrum was compared with a similar disaccharide synthesized by Hsu et al.,23 where H-3e was at 2.89 ppm. Furthermore, the C-1 chemical shift of 169 ppm and 3J(C-1, H-3eq) of 6.0 were in perfect agreement with the assigned configuration.
Finally we tested the deprotection in the context of the multistep synthesis of high mannoses (Scheme 3). First, the PMP deprotected mannoside 8c was converted into the corresponding trichloroacetimidate donor 18 by treatment of the 1-OH sugar with Cl3CCN and DBU. After coupling the linker through a TMSOTf promoted reaction in good yield (→19), removal of the NAP protection gave the acceptor 20 ready for glycosylation with donor 12.20
Subsequent methanolysis of the acetyl ester from the synthesized disaccharide 21 made the 2-OH position of 22 available for further elongation. Glycosylation of 22 with the known donor 23,24 using NIS–TfOH as the promoter, gave the tetramannoside 24. Desilylation of the latter compound with TBAF in THF gave acceptor 25, which was again glycosylated with 23
24 under the aforementioned conditions to afford the hexamannosides 26. Deacetylation under Zemplen conditions and Pd–C catalyzed hydrogenolysis yielded the so called Man6 glycan 27. The NMR spectra of the final compound were in agreement with those reported in the literature.25
:
1 CH2Cl2–MeOH (5 ml) DDQ (5 equiv.) was added. The mixture was stirred for 6 h, when TLC (cyclohexane–EtOAc) showed disappearance of the starting material. The crude mixture was diluted with CH2Cl2 (15 ml) and extracted three times with aq. NaHCO3. Combined organic layers were evaporated under vacuum and purified on silica gel (cyclohexane–EtOAc) to provide the deprotected compound.
:
1 (or 9
:
1) CH3CN–H2O (5 ml), CAN (5 equiv.) was added. The mixture was stirred for 6 h at 0 °C or room temperature, then TLC (cyclohexane–EtOAc) showed the completion of the reaction. The crude mixture was diluted with CH2Cl2 (15 ml) and extracted three times with aq. NaCl. Combined organic layers were evaporated under vacuum and purified on silica gel (cyclohexane–EtOAc) to provide the deprotected compound.
:
1 cyclohexane–EtOAc) showed the completion of the reaction. The crude was quenched with TEA, concentrated and chromatographed on silica gel to give 13 (245 mg, 78%) as a transparent oil. [α]25D = +48.7° (c 0.33, CHCl3). 1H NMR (CDCl3, 400 MHz): 7.41–6.80 (m, 39H, H–Ar), 5.54 (t, J = 1.7 Hz, 1H, H-2C), 5.47 (dd, J = 1.6, 2.4 Hz, 1H, H-2B), 5.45 (d, 1H, H-1B), 5.38 (dd, J = 1.4, 3.1 Hz, 1H, H-2A), 5.29 (d, 1H, H-1A), 5.00 (d, 1H, H-1C), 4.93–4.51 (m, 14H, 7 × CH2Ph), 4.48–4.47 (m, 1H), 4.05–3.98 (m, 3H), 3.95–3.83 (m, 6H), 3.82–3.71 (m, 8H), 3.66 (s, 3H, OCH3), 2.22, 2.20 (2 s, 3H each, 2 × CH3CO). 13C NMR (CDCl3): δ 170.4, 170.3, 170.2 (3 × CO), 155.1–114.5 (C–Ar), 102.0 (C-1A), 97.9 (C-1B), 95.8 (C-1C), 80.0, 77.9, 77.7, 75.3, 75.2, 75.0, 74.3, 74.0, 74.5, 73.4, 72.5, 71.8, 71.7, 71.6, 71.5, 68.9, 68.7, 68.5, 68.4, 55.5 (OCH3), 21.1, 21.0 (3 × CH3CO). HR ESI MS C80H86O20: [M + H]+ calc. 1367.5642; found 1367.5791.
:
1 cyclohexane–EtOAc) showed the completion of the reaction. The crude was quenched with TEA, concentrated and chromatographed on silica gel to give 15 (79 mg, 85%) as a syrup. [α]25D = +72.5° (c 0.60, CHCl3). 1H NMR (CDCl3, 400 MHz): 7.39–6.63 (m, 32H, H–Ar), 5.51 (d, J = 3.6 Hz, 1H, H-1A), 4.99 (d, J = 3.3 Hz, 1H, H-1B), 4.96–4.50 (m, 10H, 5 × CH2Ar), 4.56 (dd, J = 3.4, 10.5 Hz, H-2A), 4.15 (dd, J = 2.7, 9.9 Hz, 1H, H-3A), 4.11–4.07 (m, 1H, H-5B), 4.02–3.98 (m, 1H, H-5A), 4.02 (dd, J = 2.3, 9.3 Hz, H-2B), 3.91 (dd, J = 7.0, 8.9 Hz, 1H, H-3B), 3.70–3.55 (d, 1H, H-4B), 3.63 (s, 3H, OCH3), 1.09 (d, J = 6.0 Hz, 3H, H-6B), 0.90 (d, J = 6.3 Hz, 3H, H-6A). 13C NMR (CDCl3, 100 MHz): δ 155.8–114.4 (C–Ar), 95.4 (C-1A), 94.4 (C-1B), 83.8 (C-5A,B), 82.2 (C-3B), 82.5 (C-3A), 78.2 (C-4A), 77.4 (C-4B), 76.0, 74.7, 73.0, 72.6, 70.7 (CH2Ar), 67.0 (C-2B), 63.3 (C-2A), 55.6 (OCH3), 16.6, 16.3 (C-6A,B). HR ESI MS C58H60O10: [M + H]+ calc. 939.4084; found 939.4056.
:
1 toluene–EtOAc) showed the completion of the reaction. The mixture was neutralized with TEA, filtered and concentrated. Chromatography of the residue (cyclohexane–EtOAc) gave 50 mg of product 17 (65%). [α]25D = +34.0° (c 0.22, CHCl3). 1H NMR (CDCl3, 400 MHz): 7.54–6.82 (m, 14H, H–Ar), 5.70 (s, 1H, PhCH), 5.58–5.54 (m, 1H, H-8B), 4.96–4.89 (m, 3H, PhCHa, H-6B, incl. d, 4.88, J = 8.6 Hz, H-1A), 4.80–4.55 (m, 3H, PhCHb, H-6aA, H-4B), 4.49–4.43 (m, 1H, H-7B), 4.39–4.19 (m, 2H, H-3A, 6bA), 4.39–4.19 (dd, J = 2.7, 9.9 Hz, 1H, H-3A), 4.11–4.07 (m, 1H, H-5B), 3.98–3.78 (m, 1H, H-2A,9B, incl. s, 3.79, OCH3), 3.66–3.30 (m, 2H, H-5A,B), 2.89 (dd, J = 3.3, 12.1, H-3eB), 2.20–2.05 (m, 14H, H-3aB, 4 × CH3CO). 13C NMR (CDCl3): δ 171.9, 171.4, 171.0, 169.8, 165.7 (5 × CO), 138.5–126.2 (C–Ar), 102.9 (C-1B), 101.8 (PhCH), 76.9, 76.4, 76.0, 75.5 (PhCH2), 76.4, 74.2, 73.5, 70.4, 69.2 (C-6A), 66.3, 63.2 (C-9B), 60.4, 59.2 (OCH3), 53.7 (C-5C), 52.8 (COOCH3), 36.6 (C-3B), 24.5, 21.1, 20.8, 20.7 (4 × CH3CO). HR ESI MS C46H51NO19: [M + H]+ calc. 922.3134; found 922.3166.
:
3 cyclohexane–EtOAc) showed the completion of the reaction. The mixture was neutralized with TEA, filtered and concentrated. Purification of the residue on silica gel (cyclohexane–EtOAc) gave the product 21 (2.1 g, 94%). [α]25D = +30.0° (c 2.4, CHCl3). 1H NMR (CDCl3, 400 MHz): 7.87–6.25 (m, 39H, H–Ar), 5.52 (br. s, 1H, H-2B), 5.25 (s, 1H, H-1B), 5.13, 5.09 (2 d, J = 11.7 Hz, 2H, CH2Cbz), 4.95–4.51 (m, 11H, 5 × CH2Ph, incl. s, 4.88, H-1A), 4.16–3.77 (m, 8H), 3.76–3.66 (m, 4H), 3.47–3.42 (s, 1H, H-1′b), 3.27–3.19 (m, 2H, H-3′), 2.11 (s, 3H, CH3CO), 1.77–1.72 (m, 2H, H-2′), 1.12 (s, 9H, tBuSi). 13C NMR (CDCl3): δ 163.5, 156.3 (2 × CO), 138.6–127.8 (C–Ar), 99.7 (C-1B), 97.3 (C-1A), 78.8, 78.0, 75.1, 74.9, 74.8, 74.3, 73.7, 73.2, 72.9, 72.3, 72.1, 69.2, 68.9, 66.5 (C-6A), 65.1 (C-6B), 63.1 (C-1′), 38.5 (C-3′), 29.5 (C-2′), 26.8 (tBuSi), 21.0 (CH3CO). HR ESI MS C76H83NO16Si: [M + Na]+ calc. 1268.5531; found 1268.5543.
:
3 cyclohexane–EtOAc) showed the completion of the reaction. The mixture was neutralized with TEA, filtered and concentrated. Chromatography of the residue (cyclohexane–EtOAc) gave 1.5 g of 24 (88%). [α]25D = +18.9° (c 2.15, CHCl3). 1H NMR (CDCl3, 400 MHz): 7.77–7.03 (m, 70H, H–Ar), 5.63 (br. s, 1H, H-2D), 5.34 (s, 1H, H-1B), 5.28 (s, 1H, H-2C), 5.23–5.11 (m, 3H, CH2Cbz, NH), 4.98–4.32 (m, 22H, 11 × CH2Ph, incl. s, 4.86, H-1A), 4.16–3.47 (m, 21H), 3.47–3.41 (s, 1H, H-1′b), 3.24–3.09 (m, 2H, H-3′), 2.21 (s, 3H, CH3CO), 1.77–1.71 (m, 2H, H-2′), 1.12 (s, 9H, tBuSi). 13C NMR (CDCl3): δ 170.2, 156.3 (2 × CO), 138.8–126.5 (C–Ar), 101.2 (C-1B), 100.5 (C-1C), 99.4 C-1D), 97.2 (C-1A), 80.3, 79.4, 78.3, 75.2, 75.0, 74.5, 74.7, 74.2, 73.4, 73.0, 72.7, 72.4, 72.0, 71.9, 69.8, 69.2, 68.7, 66.5, 65.2, 63.2 (C-1′), 38.4 (C-3′), 29.6 (C-2′), 26.8 (tBuSi), 21.2 (CH3CO). HR ESI MS C130H141NO24Si: [M + Na]+ calc. 2150.9511; found 2150.9525.
:
4 pyridine–dioxane and 70% HF·pyridine was added. After stirring overnight, the mixture was concentrated and purified on silica gel (cyclohexane–EtOAc) to give 25 (1.17 g, 91%). [α]25D = +29.4° (c 0.46, CHCl3). 1H NMR (CDCl3, 400 MHz): 7.44–7.17 (m, 60H, H–Ar), 5.64 (br. s, 1H, H-2D), 5.33 (s, 1H, H-1B), 5.28 (s, 1H, H-2C), 5.19–5.13 (m, 3H, CH2Cbz, NH), 4.92–4.32 (m, 22H, 11 × CH2Ph, incl. s, 4.88, H-1A), 4.18–3.51 (m, 21H), 3.39–3.39 (s, 1H, H-1′b), 3.24–3.13 (m, 2H, H-3′), 2.20 (s, 3H, CH3CO), 1.74–1.60 (m, 2H, H-2′). 13C NMR (CDCl3): δ 170.1, 156.4 (2 × CO), 138.8–126.5 (C–Ar), 101.0 (C-1B), 100.6 (C-1C), 99.5 C-1D), 97.6 (C-1A), 79.4, 79.3, 78.3, 77.9, 75.2, 74.7, 74.2, 73.4, 73.1, 72.8, 72.5, 72.3, 72.2, 72.0, 69.7, 69.9, 68.5, 66.6, 65.2, 62.2 (C-1′), 39.3 (C-3′), 29.6 (C-2′), 21.1 (CH3CO). HR ESI MS C114H123NO24: [M + Na]+ calc. 1912.8333; found 1912.8351.
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: 10.1039/c6qo00144k |
| This journal is © the Partner Organisations 2016 |