Plinio
Innocenzi
* and
Luigi
Stagi
*
Department of Chemistry and Pharmacy, Laboratory of Materials Science and Nanotechnology, CR-INSTM, University of Sassari, via Vienna 2, Sassari, 07100, Italy. E-mail: plinio@uniss.it; lstagi@uniss.it
First published on 16th June 2020
The appearance of new and lethal viruses and their potential threat urgently requires innovative antiviral systems. In addition to the most common and proven pharmacological methods, nanomaterials can represent alternative resources to fight viruses at different stages of infection, by selective action or in a broad spectrum. A fundamental requirement is non-toxicity. However, biocompatible nanomaterials have very often little or no antiviral activity, preventing their practical use. Carbon-based nanomaterials have displayed encouraging results and can present the required mix of biocompatibility and antiviral properties. In the present review, the main candidates for future carbon nanometric antiviral systems, namely graphene, carbon dots and fullerenes, have been critically analysed. In general, different carbon nanostructures allow several strategies to be applied. Some of the materials have peculiar antiviral properties, such as singlet oxygen emission, or the capacity to interfere with virus enzymes. In other cases, nanomaterials have been used as a platform for functional molecules able to capture and inhibit viral activity. The use of carbon-based biocompatible nanomaterials as antivirals is still an almost unexplored field, while the published results show promising prospects.
Antiviral substances can generally be divided into virostatic and virucidal, depending on the counteracting action against a particular virus.1 The former are substances that act in the early stages of infection by inhibiting viral replication and the proliferation of the virus. They are based on a binding mechanism and can, therefore, often be ineffective if they detach and leave the viral particles untouched.1 Virucidal medicines, on the other hand, can permanently deactivate the virus, with effects that remain even after dilution. However, many of the molecules that have such an effective antiviral action are toxic.1 Research on the antiviral properties of carbon-based nanomaterials is still in its embryonic state. The main interest in these systems lies precisely in their potential low toxicity3 and innovative virus inhibition mechanisms. The ambition of using nanoscale systems is to combine virostatic properties with virucidal inactivation processes.
Among the nanomaterials that have been tested in nanomedicine and biotechnology, nanoparticles are certainly the most important to date.4–6 Their antiviral activity is exerted through multiple mechanisms. The small size and tailored functionalization of the surface favour drug delivery and entry through the cell membrane (negatively charged). They can also have biomimetic properties as in the case of dendrimers.1 The possibilities of using nanomaterials for nanomedical purposes are potentially vast and take advantage of the flexible synthesis, biocompatibility, surface tunability, and design of the chemical and structural composition.4
In this perspective review, we have considered the most significant results in the field of carbon-based nanomaterials for antiviral applications. In general, carbon nanomaterials show low cytotoxicity and present specific antiviral activities. Although relatively new in the nanomedical field, they have stimulated intense research activity aimed at controlling the synthesis and functionalization of their surfaces. The related surface engineering has allowed effective tuning of the surface properties for specific applications. Graphene-based systems have proven to work well both via direct interaction with the virus (also through photo-induced mechanisms) and as platforms for other particles or molecules with antiviral properties. In addition to graphene, carbon dots, systems smaller than 10 nm, have also been shown to have specific antiviral properties and broad-spectrum responses. The other class of carbon nanomaterials that we have considered is fullerene and its derivatives. They were the first ones to be tested as antiviral carbon materials and have shown remarkable antiviral properties as an inhibitor of viral activity or as a photoactivator. It can be envisaged that in the future, the need for antiviral materials will attract more attention towards carbon-based nanomaterials and new fields of application can be expected to be developed.
In particular, graphene oxide has shown antibacterial activity, although a clear origin of this effect has not yet been identified.14,15 The antibacterial activity of graphene oxide (GO) and reduced graphene oxide (rGO) has been tested on E. coli bacteria. It has been observed that GO produces damage to the membranes of bacterial cells, causing the exit of the cytoplasm. It has also been observed that E. coli cells respond to GO or rGO exposure in a different way. The E. coli cells are singularly wrapped by GO layers, while in the case of rGO they are embedded into large aggregates. GO shows, in general, the highest antibacterial activity, which depends on time and concentration. The origin of this effect has been attributed to oxidative stress. In fact, GO and rGO oxidize glutathione, which acts as the redox state mediator in bacteria, and physically disrupt the membrane via direct contact with the sharp parts of the GO layers.16
Fig. 1 shows the antiviral effect of graphene oxide at noncytotoxic concentrations. Experiments have shown that GO inactivates the virus before it enters the cells. The virus is inactivated by physical disruption of the structure through direct interaction with the sharp edges of the GO layers. Images taken by TEM have shown that the glycoprotein spikes in the virion envelop, after incubation with GO for one hour, have been destroyed. The antiviral activity was effective on both DNA and RNA viruses, and dependent on concentration and incubation time. Interestingly, it has been observed that rGO and GO show a similar antiviral activity, which suggests a minor role of the surface functional groups. Because GO and rGO have a similar negative charge and layered structure, the physical interaction of the viruses with their sharp edges should be at the origin of the antiviral activity. GO has been found to inactivate the virus before it enters the cell. Another important factor is the negative charge of GO, which favours electrostatic interaction with the positively charged viruses. The higher interactions result in the destruction and inactivation of the virus.
Fig. 1 Anti-PRV activity of graphene oxide on PK-15 cells. (A) Plaque-reduction assay using PK-15 cells infected with PRV in the presence and absence of GO. The number of plaques (clear spots) represents the amount of virus in a given dilution. Mock infected cells (top left); cells infected with PVR of 2000 pfu (top middle) and 200 pfu (top right); cells treated with 6 μg mL−1 GO (bottom left); PRV-infected cells in the presence of GO at 2000 pfu (bottom middle) and 200 pfu (bottom right). (B) Indirect immunofluorescence assay of PK-15 cells infected with PRV in the presence and absence of GO. Blue, DAPI; green, FITC-conjugated goat anti-mouse antibody. Reproduced with permission from ref. 18. Copyright 2015 American Chemical Society. |
A confirmation of the role of the negative charge of GO can be found in the experiments performed by Sametband et al.20 They tested the antiviral activity of GO layers and partially reduced sulfonated GO (rGO-SO3). Both of these nanomaterials have a negative charge, due to carbonyl and sulfonate surface groups, and can inhibit the infection from the herpes simplex virus type-1, HSV-1 (Human Alphaherpesvirus 1) (vide infra). HSV-1 is a double-stranded DNA virus, and is a member of the Human Herpesviridinae family. It is an enveloped virus with a spherical pleomorphic structure whose diameter is around 200–250 nm. HSV-1 causes oral herpes or cold sores in a large portion of the world population.
GO has also been tested as a label free nanomaterial to detect and inhibit viral activity.21 Two enteric viruses have been used, H9N2 (endemic gastrointestinal avian Influenza A virus) and EV71, a virus responsible for hand, foot and mouth disease. H9N2 is a subtype of the Influenza A virus (bird flu) belonging to the Orthomyxoviridae family. EV71 is a non-enveloped virus of small dimensions, about 30 nm in diameter, belonging to the Picornaviridae family. The antiviral effect of GO has been found to be strongly dependent on the temperature; at 25 °C and 37 °C only a weak antiviral activity is detected, less than 0.5 and 1 log respectively (Fig. 2). Experiments have been performed in the presence of GO at 56 °C, a threshold value for virus inactivation. In general, not all viruses inactivate at 56 °C, but both the H9N2 and EV71 viruses lost their infectivity completely when GO was added.
Fig. 2 (a) Schematic representation of the GO and virus interaction exposed at different temperatures. The physiochemical interactions between viruses and reactive oxygenated groups are indicated by dotted lines. The release of viral RNA is described in red. (b) AFM images (left) and height profile (right) of the GO. (c) The temperature-dependent removal of EV71 and (d) H9N2 at room temperature (25 °C), physiological temperature (37 °C), and the commonly used inactivation temperature of viruses (56 °C). Reproduced with permission from ref. 21. Copyright 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim. |
The authors have underlined that the localized reactive oxygen groups on the GO surface are a critical parameter to control the virus binding through the physicochemical reactions activated by the thermal reduction. The viruses captured by GO have shown a loss of structural integrity with destruction of the spike structures. Because of the virus integrity loss, an immediate leaking of RNA is observed. This can be used as a process to extract RNA and for quick virus detection using a one-step RT-PCR assay assisted by GO. After 30 min at 56 °C, the content of leaked RNA in the presence of GO was 46.9% for EV71 and 53% for H9N2, and only 5.6% and 6% without GO.
The direct effect produced by graphene sheets on Ebola virus has also been theoretically investigated. Molecular dynamic calculations have been used to simulate the interactions of graphene with Ebola VP40 oligomers.22 The graphene layers are able to recognize and break the hydrophobic protein–protein interactions in the matrix protein VP40.
Fig. 3 Survival of viruses in the aqueous phase (a) and solid phase (b) with visible-light irradiation or under dark conditions. The line of no detected viruses expresses only one virus in the suspension. Reproduced with permission from of ref. 24. Copyright 2012 Elsevier Ltd. |
In another example, GO layers have been used to produce a GO–Tungsten oxide composite whose antiviral activity has been tested under UV light irradiation using a MS2 bacteriophage virus on the surface of the material.26
This peculiar property of AgNPs can be integrated with GO, which acts as a platform for the nanoparticles; this has the advantage of avoiding the agglomeration of the AgNPs while the negatively charged GO may attract the virus. The therapeutic approach is based on using the NPs as an extracellular inhibitor, preventing the viruses from entering the cells. The antiviral activity of a GO–AgNPs nanocomposite has been tested with non-enveloped viruses, feline coronavirus (FCoV) and infectious bursal disease virus (IBDV).30 The non-enveloped FCoV belongs to the family of Coronaviridae and species Alphacoronavirus 1. It infects cats worldwide and is responsible for the most common and deadly feline infectious diseases. IBDV is a double-stranded RNA non-enveloped virus of the Birnaviridae family and Infectious Bursal disease species with a diameter of 60–65 nm. Only a limited antiviral activity has been detected; in the best case, the GO–Ag nanosystem was able to inhibit 25% of infection by FCoV.
A similar approach has been followed by Du et al., to prevent viral entry into the cells.31 AgNPs have been self-assembled on the surface of GO via interfacial electrostatic forces. The inhibition efficiency was 59.2% in the case of porcine reproductive and respiratory syndrome virus (PRRSV), which is an RNA virus with a strong impact on the pig industry (Fig. 4). Interestingly, besides the antiviral effect due to the virus binding with the AgNPs, another mechanism has been suggested. The GO–AgNPs enhance the production of interferon-α (IFN-α) and IFN-stimulating genes (ISGs), which causes direct inhibition of virus proliferation.
Fig. 4 Effect of GO-AgNP nanocomposites on the entry of PRRSV. (a) Plaque assays of the control and PRRSV before exposure to 4.0 μg mL−1 GO–AgNP nanocomposites. (b) The influence of the concentration of the GO–AgNPs nanocomposites on the relative titer of the virus. Reproduced with permission from ref. 31. Copyright 2018 American Chemical Society. |
Other examples that mimic the extracellular cell matrix have been reported, which include GO functionalization with polyglycerol sulfate,32 β-cyclodextrin33 and polyglycerol sulphate in combination with alkyl chains.34
A main issue regarding the functionalization of GO is controlling the density and distribution of the groups attached to the surface. Gholami et al.35 developed a one-pot [2 + 1] nitrene cycloaddition reaction to functionalize graphene by 2-azido-4,6-dichloro-1,3,5-triazine (Fig. 5). In a second step, the GO surface was covered with sulphonate groups using polyglycerol with a few amino functional groups, PG(NH2)4%. This method allowed a platform with a uniform distribution of hyperbranched polyglycerol on the surface to be obtained. In a further step, the surface was sulphated to obtain a heparin sulphate mimetic 2D material. The nano-platform is highly negatively surface charged and has a very good dispersibility in an aqueous environment. The capability of this platform to bind viruses has been tested using Vesicular Stomatitis Virus (VSV) as a model. VSV is an enveloped virus belonging to the Rhabdoviridae family and Indiana vesicolorum species. It is a zoonotic virus which is commonly used for laboratory studies of viral evolution in Rhabdoviridae viruses.
Fig. 5 Functionalization of graphene by [2 + 1] nitrene cycloaddition using 2-azido,4,6-dichloro-1,3,5-triazine as a nitrene precursor. Stepwise nucleophilic substitution of chlorine atoms of triazine groups at different temperatures resulted in controlled post-functionalization of thermally reduced graphene oxide-triazine. Reaction conditions; i = N-methyl-2-pyrrolidon, 0 °C, 1 h and ii = sonication, stirring, room temperature 70 °C, 24 h. Reproduced with permission from ref. 35. Copyright 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim. |
GO layers with only hydroxyl groups have shown a small affinity towards VSV in comparison with the GO with a high density of sulphates. In physiological conditions, the sulphate groups are considered the main cause of the interaction between GO and viruses under physiological conditions. The virions do not show any change after binding to the sulphonated GO platform. The authors have, therefore, excluded any disinfection activity on VSV from the action of the reactive oxygens generated by GO.16 A GO-based 2D platform composed of 6% graphene and 94% sulphated polyglycerol has been found to be able to trap 20 virions.
A very similar strategy has been developed by Ziem et al.,32 to create a mimetic extracellular matrix via functionalization of graphene sheets with polyglycerol sulphates. The entry inhibition has been evaluated using two enveloped viruses with a double stranded DNA genome, Pseudorabies Virus (PrV, Suid herpesvirus 1) and African swine fever virus (ASFV). ASFV is an enveloped icosahedral, double stranded DNA virus of large dimensions (170–190 nm diameter). ASFV causes African swine disease, which is deadly for pigs.
The surface has been functionalized using linear or dendritic polyglycerol sulphate, which gives negatively charged GO platforms (Fig. 6). The linear polyglycerol azides have a higher inhibitory effect in comparison to the dendritic one in the case of PrV, but the effect is analogous for ASFV. The linear conformation favours the interaction with the virus because it is more like the heparan sulphate in the extracellular matrix, which interacts with the herpes viral glycoproteins gB and gC.
Fig. 6 Schematic representation of inhibitor development by combining thermally reduced graphene oxide (TRGO) with either dendritic polyglycerol (dPG) azide or linear polyglycerol (lPG) azide. Reproduced with permission from ref. 32. Copyright 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim. |
Another graphene platform to bind viruses has been developed by Donskyi et al. who functionalized GO with polyglycerol sulphate and fatty amine functionalities.34 The interaction of this platform with Herpes Simplex Virus type 1 (HSV-1) has been studied. The combination of sulphate and alkyl chains produces binding of the virus through electrostatic interactions with the polyglycerol sulphate, while the alkyls induce a high antiviral activity through secondary hydrophobic interactions. Alkyl chains of different lengths (C3–C18) have been tested. Longer alkyl chains have been found to have the highest antiviral activity, but they are also toxic against Vero cells. The best compromise in terms of toxicity and antiviral effects is observed in layers functionalized with C6 and C9 alkyl chains.
GO has also been used as a platform for curcumin, a natural polyphenol, which is known for its antioxidant, antibacterial and antiviral activity.33 Curcumin was efficiently linked to the GO surface via β-cyclodextrin molecules used as intermediate sites (Fig. 7). The antiviral effect of the system was tested with Respiratory Syncytial Viruses (RSV). RSV is an enveloped RNA virus (120–200 nm in diameter), belonging to the Pneumoviridae family and Human Orthopneumovirus species.
Fig. 7 Schematic representation of the working principle. (A) The synthesis of a functional nanomaterial composite. (B) The proposed inhibition mode of the functional nanomaterial composite against RSV infection. Reproduced with permission from ref. 33. Copyright 2017 The Royal Society of Chemistry. |
The antiviral activity of the nanosystem was explained on the basis of three different mechanisms that could synergistically operate: inhibition of the virus attachment on the surface of the cells, interference of virus replication and direct inactivation of the virus.
Controlling the graphene–virus interactions, which could be direct or mediated through surface functionalization, depends on several parameters. In particular, the dimensions, the number of layers, the surface wrinkling and the geometrical topology of the layers have a key role. The interaction of graphene with three key target proteins, HIV-Vpr, Nef and Gag, of HIV has been modelled to evaluate the effect of the number and size of layers.36 The bonding affinity of graphene does not increase with the number of layers, and from 1 to 5 layers no changes should be expected on the basis of theoretical calculations. On the other hand, increasing the size produces an enhancement of the binding affinity.
Fig. 8 First, graphite was oxidized to GO by a modification of Hummers' method. Next, the GO was functionalized with magnetic nanoparticles and reduced to MRGO. Finally, the MRGO was sulfonated to yield SMRGO. Reproduced with permission of ref. 38. Copyright 2017 American Chemical Society. |
The high thermal conductivity of graphene is correlated to its excellent capability of light-to-heat conversion. This property has been used for photothermal39 and photodynamic40 treatments of cancer cells and bacteria. The sulphonated reduced graphene oxide with grafted magnetic iron nanoparticles has shown a remarkable capability to inactivate HSV-1. 99.99% of the virus was inactivated within 10 minutes upon irradiation with NIR light.
Studies on the antiviral properties of carbon dots are very recent and in small numbers. Nevertheless, they show promising opportunities for such nanomaterials.
Carbonization of organic precursors can give carbon-based nanoparticles, whose structural characteristics, although still debated, can be easily engineered thanks to an appropriate choice of precursors.44–46 More precisely, C-dots represent a large family of carbon-based materials, whose structure is still under debate. Different types of nanomaterials are included in the family of C-dots, amorphous carbon nanoparticles, partially graphitized core–shell carbon nanoparticles, amorphous fluorescent polymeric nanoparticles and graphene quantum dots (GQDs). GQDs are small fragments of graphene, with a lateral size <10 nm, and share many properties with carbon dots and graphene. The large variety of C-dots results in potential applications ranging from photocatalysis to bioimaging. However, in addition to the remarkable optical properties that make them the main candidates for new generations of optoelectronic devices, C-dots have also shown an active role against infections. This is mainly due to the functional groups on their surface, which in turn are responsible for their extraordinary optical properties. As we will see, these functional groups influence the antiviral properties of C-dots, making them active against a virus or even determining their broad-spectrum effects.
Recent experiments have shown that some nanostructures functionalized with boronic acid are able to inhibit the entry of some viruses and block their attachment.47 In the light of these results, C-dots made from boronic acid precursors have been recently particularly relevant. C-dots have been tested against Herpes simplex Virus Type 1 (HSV-1) with encouraging results. The experiments were performed under classical in vitro conditions on monkey kidney cancer cells (Vero) and human lung cancer cells (A549), and cytotoxicity and antiviral assays were performed. The properties and functionality of three different types of C-dots, made with the hydrothermal technique, have been investigated. The precursors of C-dots have guaranteed the formation of different functional groups, revealed through vibrational spectroscopy techniques. Phenylboronic acid (PBA), 3-aminophenylboronic acid (3-APBA), or 4-aminophenylboronic acid hydrochloride (4-APBA) have been used as precursors. After treatment at 160 °C for 8 h the products were dialyzed before being used for in vitro studies.
The cytotoxicity study revealed that all three C-dots were non-cytotoxic towards A549 cells at concentrations of up to 300 μg mL−1. Moreover, PBA and 4-APBA derived C-dots showed no cytotoxicity to Vero cells, although 3-APBA based C-dots were moderately cytotoxic. As shown in Fig. 9, at a concentration higher than 5 μg mL−1 of 3-APBA/C-dots and 4-APBA/C-dots, no infection was detected with 100% cell viability. On the contrary, PBA/C-dots have shown no effectiveness against virus infection. Interestingly, the role of C-dots can be revealed by a morphological study of the cells. As a result of virus presence, the cells undergo an important change in shape and dimensions, while being unaltered under treatment with C-dots. The contrasting mechanism of C-dots to the virus is not completely understood. Indeed, it has been confirmed that boronic acid is not involved in the inhibition of HSV-1, in contrast to other boronic acid-modified nanostructures. C-dots have a significant impact at the early stage of virus entry by interacting more with Vero cells than with viral entities, interfering with the interaction between cell receptors and the virus.48
Fig. 9 C-dot inhibition effects of HSV-1 on A549 (A) and Vero (B) cells at different concentrations. (C) Morphological effects of C-dot treatments. Reproduced with permission from ref. 48. Copyright 2016 American Chemical Society. |
The effect of virus inhibition of C-dots has also been tested with Human Immunodeficiency Virus HIV-1 infections. HIV-1 is a Retrovirida family virus, with a diameter of 120–200 nm, which is responsible for the disease.
C-dots with a hydrodynamic diameter of about 3 nm have been prepared by carbonization of anhydrous citric acid at 200 °C for 30 min and dialyzed thereafter. The obtained C-dots have also been functionalized with 4-carboxy-3-chlorobenzeneboronic acid (CBBA/C-dots). In this case, the role of boronic acid groups has been pointed out. C-dots and CBBA/C-dots have been mixed with MOLT-4 cells to assess the cytotoxicity. Both dots appeared safe, up to a high concentration of 300 μg mL−1, with cell viability over 80% even at 300 μg mL−1. The corresponding CC50 values were 2901.2 and 1991.9 μg mL−1. The antiviral role of C-dots and CBBA/C-dots has been studied by evaluating syncytia formation. Indeed, one of the most efficient routes of virus transition from an infected cell to a normal cell takes place with direct contact. Counting the numbers of syncytia in the presence of dots can be a good way of evaluating the virus infection. As a result, C-dots have not prevented the formation of syncytia, while CBBA/C-dots have bonded to gp120 on the virus, blocking the infection by preventing the MOLT-4 cells from binding (Fig. 10). Although hydroxyl and carboxylate surface groups on C-dots can inhibit HIV infection by the formation of hydrogen bonding with the molecules of the viral envelope, the boronic acid tends to enhance this effect, by interacting with 1,2-cis diol sites on gp120.49
Fig. 10 Proposed mechanism via which CBBA/C-dots inhibit the entry of HIV-1. Reproduced with permission from ref. 49. Copyright 2016 The Royal Society of Chemistry. |
PEG-diamine and ascorbic acid derivate C-dots have shown encouraging results as viral inhibitors by active functionality. The dots, showing a low level of cytotoxicity with cell viability of 72% after 48 h incubation at the concentration of 0.250 mg mL−1, have been tested on Monkey kidney (MARC-145) and Porcine kidney (PK-15) cells. In particular, MARC-145 cells have been infected by porcine reproductive and respiratory syndrome virus (PRRSV) and PK-15 by Pseudorabies Virus (PRV). The virus titers were reduced in the presence of C-dots in comparison with the control groups (Fig. 11). PRV has also been studied by indirect immunofluorescence assay of PRV-gD and PRV-VP16, which is responsible for binding with host cell receptors and is a component of primary enveloped virions, respectively. The samples treated with C-dots showed a significant decrease in fluorescence in accordance with the titer count. The experiments on PRRSV gave the same conclusions, with remarkable inhibitory effects of CDs. At the same time, the investigation of type I interferons (IFNs) α, antiviral innate immune molecules, and the IFN-stimulated genes (IFGs) has indicated a possible inhibitory mechanism of C-dots via the activation of IFN-α and production of ISGs.50
Fig. 11 The replication process of PRV (top) and PRRSV (bottom). Reproduced with permission from ref. 50. Copyright 2016 Elsevier Ltd. |
Similar results have been obtained for curcumin derived C-dots, exploiting the antiviral activity of herbs.51,52 They have been applied to porcine epidemic diarrhoea virus (PEDV) as a coronavirus model. Ting et al. have treated a mixture of citric acid and curcumin at 180 °C for 1 h under hydrothermal conditions (CCM/C-dots) and compared the resulting C-dots with the more common ethylenediamine-based dots (EDA/C-dots). It was found that CCM/C-dots display a great efficacy against the replication of PEDV in comparison with EDA/C-dots. In fact, CCM/C-dots can modify the structure of the surface proteins in viruses, suppress the negative-strand RNA of the virus and the accumulation of reactive oxygen species, and stimulate the production of ISGs and cytokines. The inhibition of PEDV in Vero cells at the CCM/C-dot concentration of 125 μg mL−1 was studied by monitoring the titer counts and green fluorescence signal of PEDV N proteins. The CCM/C-dots present a positive charge, and so strongly interact with PEDV and the cell membrane, competing with the virus to bind to the cell surface. The z-potentials of CCM-CDs, PEDV and CCM-CDs pre-treated with PEDV were +15.6, −6.42 and −0.18 mV, respectively. Therefore, the positive potential of the C-dots can promote the aggregation of the virus and reduce the infectivity, as verified by fluorescence and Raman measurements.52
Although the mechanism of action of carbon dots is still far from being fully understood, it has been well established that the role of functional groups deriving from the appropriate choice of different precursors is a fundamental parameter. This is what emerged from the experiments of Łoczechin et al.,53 where different C-dots were tested as a countermeasure to the proliferation of HCoV-229E Human Coronavirus in Huh-7 cells. HCoV-229E is an enveloped, single-stranded RNA coronavirus. It is one of the viruses that cause the common cold with a 120–160 nm diameter (Coronaviridae family, Human coronavirus 229E species). As in previous works, the primary role of C-dots is to act at the early stages of infection, inhibiting the interaction of the S-receptor protein with the host cell membrane (Fig. 12). However, not all C-dots have shown the same effectiveness, underlining the importance of molecular groups resulting from synthesis. In this work, the first group of C-dots was synthesized by hydrothermal carbonization of ethylenediamine/citric acid and functionalized according to the scheme in Fig. 13.
Fig. 12 Scheme of the carbon dot inhibition mechanism of HCoV-229E. Reproduced with permission from ref. 53. Copyright 2019 American Chemical Society. |
Fig. 13 Scheme of the functionalization of EDA/citric acid derived C-dots. Reprinted with permission from ref. 53. Copyright 2019 American Chemical Society. |
In general, the highest efficacy of C-dots occurs in the first period after infection, at about 1 h after inoculation. However, they showed significant inhibition activity even after 5.5 h. Still, the mechanism of inhibition must be figured out, although it seems to be based on the interaction with cells.
Lin et al.51 have suggested that C-dots can act at different levels of infection. Again, curcumin derived C-dots were realized by pyrolyzing curcumin at different temperatures. The C-dots were then tested against EV71 virus in RD cells. C-dots can hinder the interaction of the virus with RD cell membranes. In addition, they can suppress the ROS (reactive oxygen species) by working as radical scavengers and inhibit PGE2 production. Furthermore, it has also been reported that curcumin C-dots can decrease the expression of p38 kinase.50
A further step forward is represented by C-dots from benzoxazine. Contrary to the previous examples, where an important role of boronic acid was highlighted, in this case the effectiveness of boron-free C-dots has been demonstrated. In addition to the well-known biocompatibility, these hydrothermally synthesised C-dots made from the monomer benzoaxine BZM have demonstrated broad spectrum efficacy in blocking virus infectivity. Unlike other systems, where multiple mechanisms can intervene in antiviral activity, in this case the C-dots have shown a direct interaction with virions. C-dots have been employed against flaviviral (JEV) infections in BHK-21 cells.54 To investigate the broad-spectrum potential of C-dots, different viruses have been treated, both enveloped and non-enveloped. Although the dots present a marked effect on JEV and ZIKV, they have been demonstrated to be suitable for other viruses. The EC50 of BZM/C-dots against different viruses is 18.63 μg mL−1 (JEV), 3.715 μg mL−1 (ZIKV), 37.49 μg mL−1 (DENV), 40.25 μg mL−1 (AAV), and 45.51 μg mL−1 (PPV).54
Finally, it is worth mentioning that carbon nanoparticles with 2,2′-(ethylenedioxy)bis(ethylamine) and 3-ethoxypropylamine have been proved to inhibit the interaction of human norovirus virus-like-particles (VLPs) with HBGA receptors, leaving intact the morphology of the VLP particles.55 Additionally, VLPs have been hampered in interacting with their respective antibodies.
Unlike the other carbon materials within the C-dot classification, whose optical properties are mainly governed by the presence of fluorophores or functional groups produced during the synthesis, the photoluminescence of GQDs originates from quantum confinement effects, related to their size. Thus, the fluorescence emission can be tuned through changing the size of the graphene monolayers. GQDs can be obtained by thermal oxidation of graphene oxide, where epoxy and hydroxyl groups operate as cleavage sites and promote the cutting of GO into smaller fragments.56,57 Mixtures of acids, e.g. nitric and sulphuric, are often employed for oxidative cleavage of graphitized carbon-based materials, although there are non-acidic alternatives such as oxone and H2O2. In addition, the electrochemical cutting of graphene, graphite, coal and so on, and ultrasonic exfoliation, allow for high yield GQD production.58,59 GQDs have attracted a lot of attention because of their extraordinary potential in the biomedical field. In particular, they have been proven to be efficient and biocompatible emitters,60 which can be used for the detection of Hepatitis C Virus core antigen61 and hepatitis B virus,62 and cancer-targeted fluorescent imaging.63 GQDs have shown remarkable antiviral activity against HIV-1 infections. The most important experimental evidence of this efficacy has been reported by Iannazzo et al.64 and it remains the most significant so far. In their work, GQDs were synthesized by acid oxidation and exfoliation of multiwalled carbon nanotubes. The activity of pristine dots has been compared with the antiretroviral agents CHI499 and CDF119. Furthermore, GQDs have been conjugated with CHI499 and CDF119 as drug delivery systems. The systems were tested as inhibitors of HIV in cellular and enzyme assays, whilst the cytotoxicity was studied in MT-4 cells. GQDs have shown antiviral activity with an IC50 of 37.6 μg mL−1, and an EC50 value in cells of 19.9 μg mL−1. Among the different candidates, the GQD/CHI499 system displays the most encouraging results. Indeed, the conjugated platform showed improved antiviral properties, with an IC50 of 0.09 μg mL−1 and an EC50 of 0.066 μg mL−1 and a selectivity index of 362. Accordingly, it has been supposed that the efficacy as drug delivery relies on the imide bond in GQD/CHI499. After drug release in the infected cells, both GQD and CHI499 can synergistically act as inhibitors. On the contrary, the amide bond in GQD/CDF119 prevents easy drug release.64 Although the results open new opportunities for antiviral applications, GQDs have displayed more significant potential in bioimaging and sensing.58,65
The low solubility of fullerenes in water represents a strong limitation for their applications in biology.79 The preparation of soluble derivatives is, therefore, a mandatory step. An example of antiviral application of highly water-soluble fullerene derivatives was reported by Troshima et al. in 2007.80 Using chlorofullerene, C60Cl6, as a precursor substrate, polycarboxylic fullerenes in high yield were obtained. The fullerene derivatives in the form of alkali metal salts have a high solubility in water (50–100 mg mL−1 at pH < 7.5) and a significant anti-HIV activity with a low cytotoxicity. Another question to be addressed is the potential antiviral activity of water soluble derivatives of fullerenes with larger carbon cages, such C70. In comparison to C60, because of the lower symmetry, the synthesis of C70 water soluble derivatives is more difficult. Kornev et al. prepared highly soluble C70 compounds whose antiviral activity and cytotoxicity were tested.81 A significant antiviral activity against HIV and influenza virus, H1N1 and H3N3, was detected. Influenza A virus subtype H1N1 is a subtype of Influenza A virus, belonging to the Orthomyxoviridae family (80–120 nm in diameter). H3N3 is another type of Avian influenza virus of the same family. Interestingly, a new antiviral mechanism, through the interaction of the C70 derivatives with the envelope gp120 protein from HIV-1(IIIB), has been observed. This protein is used by the virus to enter the cells via specific surface receptor recognition.
Besides HIV, the inhibition of viral activity by fullerene derivatives has been tested for hepatitis C virus (HCV),82respiratory syncytial virus (RSV),83virus H1N1, herpes simplex virus,84human cytomegalovirus,84Zika and Dengue viruses.85
A first set of experiments was dedicated to investigating the photodynamic inactivation of enveloped viruses by suspensions of non-derivatized C60. Based on the known effect of singlet oxygen on virus inactivation,91 C60 suspensions were used as inactivating agents. The low solubility of fullerenes, in this case, is a positive property because it allows, in principle, easier and complete removal of the photosensitizer from aqueous solutions.92–94 Other sensitizers, such as hypericin, that remain in biological fluids can be potentially toxic. An aqueous fullerene suspension has been used as a photosensitizer to inactivate an enveloped virus, H1N1, in the allantoic fluid of chicken embryos.95 Damage of the surface membrane and loss of surface glycoproteins was observed upon irradiation for at least 2 hours.
Four different photosensitized aqueous fullerene suspensions have been used to inactivate the MS2 bacteriophage.96 The (1O2) generation rate follows the order: C60(NH2)6 > C60(OH)24 ≈ aqu-nC60 > C60(OH)6. The singlet oxygen produces an alteration of the capsid protein secondary structures and protein oxidation. MS2 inactivation appears to be the result of the loss of capsid structural integrity and the reduced ability to eject genomic RNA into its bacterial host has been considered the cause of MS2 inactivation (Fig. 14).
Fig. 14 Relative proximity of various fullerenes with MS2 following mixture-tuned matched filtering analysis of hyperspectral images. 5-Fold zoomed-in views (1 cm = 20 μm) of noise-free image data with superimposed classification results are shown. MS2 viruses appear as green pixels after staining with 2.5% phosphotungstic acid. C60(NH2)6 is shown as red colour (a), aqu-nC60 as blue (b), C60(OH)6 as purple (c), and C60(OH)24 as pink (d). Corresponding TEM images after sample dehydration are shown in (e–h). Reproduced with permission from ref. 96. Copyright 2012 American Chemical Society. |
The main application of fullerene suspensions that has been envisaged is to prevent the transmission of viral infections via plasma.97 Using C60 as a photosensitizer has been shown to allow full inactivation of enveloped viruses in irradiated plasma.
Inactivation of MS2 bacteriophage has also been demonstrated in the case of fullerene derivatives. Cationic amine-functionalized C60 derivatives,98 tris-adducted fulleropyrrolidinium aggregates,99 have shown a remarkable antiviral activity even if a direct comparison in terms of inactivation capability is difficult because of the different experimental conditions. A dependence of the inactivation efficacy on the intensity of light and concentration of fullerenes has been observed.84
Another possibility is using fullerenes to create a photoactive platform capable of remote inactivation of viruses and bacteria. A substrate of hot-pressed silica particles deposited on a metallic substrate was functionalized with 3-aminopropyltrietoxysilane and the amine groups used to covalently attach the fullerenes.100 The inactivation of the MS2 bacteriophage virus was studied at predefined distances from the irradiated surface. Inactivation of the virus via singlet oxygen was observed to be effective up to around 10–15 cm from the surface (Fig. 15).
Fig. 15 (a) Electrospraying silica particles (dispersed in methanol) on stainless-steel mesh; (b) hot pressing; (c) amination of silica loaded on stainless-steel mesh with 3-aminopropyltriethoxysilane; (d) covalent C60 attachment through nucleophilic addition of primary amines; and (e) use of C60 immobilized on the amine-functionalized silica-coated stainless steel mesh for visible-light-sensitized remote singlet oxygenation. Reproduced with permission from ref. 100. Copyright 2020 Elsevier Ltd. |
Another important property to consider in developing an antiviral platform based on UV irradiation of fullerenes is their radical sinking effect.101 This reduces the efficiency of binary systems formed by titania, which upon UV irradiation generates free radicals, and fullerenes, which act as radical sinks.
Many of these materials are already leading players in nanotechnology, with a key role in several research fields, such as photocatalysis, photonics and optoelectronics. Metallic and oxide nanoparticles, in particular, have been widely tested as antiviral materials,102 but several questions remain to be solved, such as the cytotoxicity, which still needs to be fully assessed. This is the reason why we have not included in the present review another important class of carbon-based nanomaterials, the carbon nanotubes. Their potential toxicity still represents, in fact, a major issue. Carbon-based nanomaterials are, however, interesting candidates for antiviral applications, in particular graphene, carbon dots and fullerenes.
Table 1 shows a summary of the main carbon nanomaterials that have been tested as antivirals. The large variety of combinations suggest that the studies in this field are still in the exploratory phase and much work needs to be done. In particular, an important general question which has to be studied and assessed is the relationship between the C-dot dimensions and shape and that of the virus. The possibility of fabricating C-dots that simulate the virus shape and surface is a very challenging issue, but specific and systematic studies have to be carefully performed.
Virus | Family | Species | Nucleic acid | Viral envelope | Carbon-based materials | Ref. |
---|---|---|---|---|---|---|
PEDV | Coronaviridae | Porcine epidemic diarrhoea virus | RNA | Enveloped | GO, C-dots | 18 and 52 |
FCoV | Alphacoronavirus 1 | GO-AgNPs | 30 | |||
HCoV-229E | Human coronavirus 229E | C-dots | 53 | |||
SuHV-1 (PRV) | Herpesviridae | Suid alphaherpesvirus 1 | DNA | Enveloped | GO, C-dots | 18 and 50 |
HSV-1 | Human alphaherpesvirus 1 | GO, C-dots, GQDs, fullerene | 20, 27, 32, 34, 38, 48, 49, 64 and 84 | |||
HCMV | Human betaherpesvirus 5 | Fullerene | 84 | |||
H9N2 | Orthomyxoviridae | Influenza A | RNA | Enveloped | GO | 21 |
H1N1 | Fullerene | 81, 91, 95 and 97 | ||||
H3N2 | — | — | ||||
H3N3 | Fullerene | 81 | ||||
EV71 | Picornaviridae | Enterovirus A | RNA | Non-enveloped | GO, C-dots | 21 and 51 |
MS2 bacteriophage | Leviviridae | Escherichia virus | RNA | Non-enveloped | GO, fullerene | 24–26, 96, 98 and 99 |
IBDV | Birnaviridae | Infectious bursal disease virus | RNA | Non-enveloped | GO-AgNPs | 30 |
PRRSV | Arteriviridae | Betaarterivirus suid 1 | RNA | Enveloped | GO-AgNPs, C-dots | 31 and 50 |
VSV | Rhabdoviridae | Indiana vesicolorum | RNA | Enveloped | GO | 35 |
ASFV | Asfarviridae | African swine fever virus | TRGO-PG | 32 | ||
HIV | Retroviridae | RNA | Enveloped | G, fullerene | 36 and 81 | |
SIV | Fullerene | 77 | ||||
M-MuLV | Murine leukemia virus | Fullerene | 77 | |||
NDRV | Reoviridae | RNA | Non-enveloped | GO/HY | 37 | |
JEV | Flaviviridae | Japanese Encephalitis virus | RNA | Enveloped | C-dots | 54 |
ZIKV | Zika virus | C-dots, fullerene | 52 and 85 | |||
DENV | Dengue virus | 54 and 85 | ||||
HCV | Hepacivirus C | Fullerene | 82 | |||
AAV | Parvoviridae | Adeno-associated dependoparvovirus | DNA | Non-enveloped | C-dots | 54 |
PPD | Ungulate protoparvovirus 1 | C-dots | 54 | |||
RSV | Pneumoviridae | Human orthopneumovirus | RNA | Enveloped | GO, fullerene | 33 and 83 |
In addition to the carbon-based nanomaterials considered in this overview, it is worth mentioning the nanodiamonds (NDs), which, with their particular surfaces and dimensions, are potential candidates of importance in nanomedicine.103 NDs are among the smallest carbon-based materials and are, conventionally, crystalline nanoparticles of about 5 nm in size.104 Their unique characteristics derive from the physico-chemical properties of the particle facets. NDs can be obtained by the detonation of explosive carbon-based materials. Some of the particles are crystalline carbon objects below 10 nm.105 This procedure suffers from several drawbacks, including the high quantity of impurities, which requires purification work. Among the most common impurities are metals and carbon-based systems with a different structure from that of the diamond. Over the years, numerous purification processes have been implemented, including oxidative treatments in the liquid or gaseous phase and acid treatments.103,106–109 One of the most severe drawbacks that can be encountered in the use of NDs is their tendency to aggregate, leading to the formation of clusters of hundreds of nanometres. This phenomenon is facilitated by the presence on the surface of functional groups (carboxylic, hydroxylic, etc.) capable of generating hydrogen or covalent bonds, determining high adhesion forces. NDs can be easily functionalized for specific biological applications. The surface functional groups determine the chemical environment of use and the interactions with tissues, and can improve the biocompatibility. Among post-synthesis processes, graphitization to obtain sp2 carbon on the surface, hydrogeneration, silanization and reactions with amines or PEG103 are the most common. To date, no studies have investigated the antiviral activity of NDs. However, considerable efforts have been made to study the toxicological properties and biocompatibility of NDs. In particular, it has been demonstrated that purified NDs do not show significant toxicity. Ivanova et al.110 reported the effects of ND interaction with influenza viruses. This study highlighted the absorbency of NDs against viruses. Viruses such as Influenza A H1N1 and H3N2 were concentrated and placed in a solution of NDs. Hemagglutination tests with erythrocytes were used for virus detection. Absorption and desorption studies have highlighted the possibility of using NDs as antimicrobial filters. NDs have shown encouraging results in attaching to the envelopes of E. coli and as an antibacterial. The most promising results highlight that NDs have relevant properties as potential drug delivery systems, with numerous engineering and functionalization possibilities.104 As an antiviral, the current literature does not show emerging opportunities and a greater effort has to be made to improve current knowledge about the cytotoxicity and purification of such systems.
Regarding the prospects of graphene as an antiviral material, we also have to distinguish between graphene and graphene oxide. Graphene oxide has antibacterial activity and, to a lesser extent, also antiviral properties, well documented for pseudorabies viruses. However, the characteristics of low toxicity and surface functionalization allow graphene to be thought of as a useful platform in combination with other antiviral systems acting on the nanoscale. For this reason, most of the experiments have used GO to exploit the possibilities of surface functionalization. GO and graphene have high potential for virus detection, but their direct use as an antiviral is also more difficult to forecast because their dimensions and shape are large on the nanoscale and difficult to control. However, to date, there are no systematic studies that allow clear identification of the antiviral mechanism to be achieved, and specific studies have to be performed to understand the graphene–virus interaction. It has been suggested that the virucidal activity is due to physical disruption of the virus by the sharp edges of graphene. It is not clear, however, if this mechanism works in general or only for specific types of virus.
Among the latest tested antiviral systems, carbon dots have shown encouraging results in terms of biocompatibility and antiviral properties. Carbon dots have many advantages. They can be easily synthesised from a few precursors through a process based on carbonisation. The surface of these nanomaterials can be properly engineered either in the synthesis phase through the choice of precursors or through a post-synthesis functionalization. The main problem with C-dots is the lack of a single model applicable to interaction with viruses. The variety of C-dot species is potentially endless and it is necessary to create a shortlist of a few potential candidates to be tested for cytotoxicity and antiviral activity studies. To date, the literature is rich in a multiplicity of papers focused on the synthesis of carbon-based particles, but lacking in systematic investigations on the role of surfaces, size, shape and functional groups.
Despite the encouraging results, there is still much to be done for the use of carbon-based nanomaterials in nanomedicine. Although carbon dots have revealed significant antiviral activity, the success rate of most C-dots is remarkable in the early stages of the infection, when the nanoparticle seems to have a role in interfering with the interaction mechanism between the virion and cell. To date, one of the main obstacles to an improvement in antiviral properties against a specific virus is the lack of knowledge of the mechanism of action. In fact, as we have seen, the dependence of antiviral activity on some surface functional groups of the nanoparticles is contradictory and not fully demonstrated. Moreover, it is not clear whether C-dots are able to attack the virus directly, playing a virucidal role. Finally, there are many in vitro experiments, while in vivo ones are still scarce, and they are necessary to know the real potential of such systems. Another advantage of C-dots is the possibility of tailored surface functionalization, but on the other hand their structure is only defined in terms of properties and a specific control is still difficult to achieve.
Fullerenes have also shown remarkable properties as antiviral nanosystems. They have the advantage, with respect to graphene and C-dots, of having a well-defined composition and shape and a well-established functionalization chemistry. Fullerenes have also been widely studied as anti-HIV agents with promising results using different types of derivatives, but also in this case the cytotoxicity needs to be carefully evaluated. Fullerenes can generate a large amount of singlet oxygen which could be used to destroy the viruses and sanitize surfaces.
The exploration of antiviral properties and applications of carbon-based nanomaterials is still a new field and much research is still needed to assess the potential in this field. Carbon nanomaterials have, however, the potential to create antiviral systems with reduced toxicity. A full assessment of cytotoxicity appears to be the main issue to allow the development of antiviral applications for such classes of materials.
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