Issue 4, 2021

Relaxometry models compared with Bayesian techniques: ganglioside micelle example

Abstract

In this work a methodology to perform Bayesian model-comparison is developed and exemplified in the analysis of nuclear magnetic relaxation dispersion (NMRD) experiments of water in a ganglioside micelle system. NMRD is a powerful tool to probe slow dynamics in complex liquids. There are many interesting systems that can be studied with NMRD, such as ionic and lyotropic liquids or electrolytes. However, to progress in the understanding of the studied systems, relatively detailed theoretical NMRD-models are required. To improve the models, they need to be carefully compared, in addition to physico-chemical considerations of molecular and spin dynamics. The comparison is performed by computing the Bayesian evidence in terms of a thermodynamic integral solved with Markov chain Monte Carlo. The result leads to a conclusion of two micelle water-pools, and rules out both less and more parameters, i.e., one and three pools. On the other hand, if only the quality of the fits is considered (i.e., mean square deviation or χ2) a three water-pool model is the best. The latter can be expected since with more adjustable parameters a better fit is more likely. Bayesian evidence is needed to rank the uncertainty of the models, and in order to explain the outcome a notation of Ockham-entropy is defined. The two approximate selection tools, Akaike and Baysian information criterions, may lead to wrong conclusions compared to the full integration. This methodology is expected to be one of several important tools in NMRD model development; however, it is completely general and should find awakened use in many research areas.

Graphical abstract: Relaxometry models compared with Bayesian techniques: ganglioside micelle example

Supplementary files

Article information

Article type
Paper
Submitted
08 Sep 2020
Accepted
02 Jan 2021
First published
05 Jan 2021
This article is Open Access
Creative Commons BY license

Phys. Chem. Chem. Phys., 2021,23, 2637-2648

Relaxometry models compared with Bayesian techniques: ganglioside micelle example

P. Håkansson, Phys. Chem. Chem. Phys., 2021, 23, 2637 DOI: 10.1039/D0CP04750C

This article is licensed under a Creative Commons Attribution 3.0 Unported Licence. You can use material from this article in other publications without requesting further permissions from the RSC, provided that the correct acknowledgement is given.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements