Open Access Article
Lucie Kuncová
,
Jana Lazarová,
Jan Kotek
,
Vojtěch Kubíček
* and
Petr Hermann
Department of Inorganic Chemistry, Faculty of Science, Charles University in Prague, Hlavova 2030, 128 40 Prague, Czech Republic. E-mail: kubicek@natur.cuni.cz
First published on 7th April 2026
Twelve-membered dipyridinophane and its derivatives bearing two acetate or methylphosphonate pendant arms were synthesised, and their coordination properties were studied. Protonation constants of the ligands and stability constants of their complexes with NiII, CuII and ZnII ions were determined through a combination of potentiometry and spectral measurements. The ligands demonstrate significantly lower basicity than other tetraazamacrocycles (cyclen, pyclen) due to the presence of two pyridine units. This low macrocycle basicity results in high conditional stabilities of the complexes in acidic solutions. The solid-state structures of the complexes reveal that divalent first-row transition metal ions form a distorted octahedron with weakly coordinated pendant arms and bent coordination of the pyridine rings, as these metal ions are too large for the ligand cavity. Conversely, the ligand cavity is very suitable for smaller trivalent metal ions, and the complexes adopt an octahedral (CoIII) or pentagonal bipyramidal (FeIII and GaIII) arrangements.
The inertness can be improved by introducing rigid fragments into the macrocyclic scaffold. Thus, pyridine-containing macrocycles have attracted increasing attention in recent years.6 The derivatives of the most extensively studied pyridine-containing macrocycle, pyclen (Fig. 1), have been studied as metal carriers in magnetic resonance imaging, radiomedicine, or optical imaging.7 The analogous macrocycle with two pyridine units, dipyridinophane (dpph, Fig. 1), attracted less attention.7,8 The parent macrocycle dpph and, mainly, its N,N′-dialkylated derivatives were synthesized and their complexes were studied as catalysts of coupling reactions,9 catechol oxidation or DNA cleavage,10,11 CO2 reduction,12 water oxidation,13,14 and H2O2 disproportionation.15–18
Complexes of dpph show various coordination modes. In complexes of 1
:
1 metal-to-ligand stoichiometry, the ligand molecule is mostly coordinated in the tetradentate fashion. It was found in the manganese(II)/(III)/(IV),16–18 iron(III),10,12 cobalt(III),12 nickel(II),12,19 copper(I)/(II),20–23 zinc(II),12 ruthenium(II),24 or uranyl(VI)25 complexes. However, tridentate ligand coordination was also observed in the CuI complex.23 Several complexes with two ligand molecules coordinated to the metal ion were also structurally characterised. The metal ion bound to two tetracoordinated ligands (i.e., coordination number 8) was found in the FeII, FeIII and CoII complexes, whereas the NiII complex was hexacoordinated with one tetracoordinated and one dicoordinated ligand.26,27 The tetradentate coordination is also mostly preserved in a number of complexes with N,N′-dialkylated derivatives.28
Macrocycles are often modified with coordinating pendant arms in order to improve complexing ability and/or properties of the complexes. The dicarboxylate derivative H2dppa (Fig. 1) was synthesised, and its protonation constants and stability constants with MgII, CaII and GdIII ions were determined.29 Later, H2dppa labelling with 64Cu was studied and compared with the dipyridinophane derivatives bearing modified phenolate pendant arms for targeting amyloid plaques associated with Alzheimer's disease.30,31 Cobalt and copper complexes with the derivatives bearing pendant methylpyridyl groups were studied as catalysts for H2 evolution,32 or as superoxide dismutase mimics.20 The derivatives bearing one or two picolinate pendant arms were studied as carriers of 52Mn for PET,33 and for a complexation of the GdIII ion in MRI.34,35
Despite various complexes of dpph and its derivatives were studied as metal ion carriers in the above-mentioned applications, there is still a lack of information on the coordination behaviour of this ligand class, mainly those bearing coordinating pendant arms. To fill this gap, we present here the results of a systematic study on acid–base and coordination behaviour of the parent macrocycle (dpph), its diacetic acid (H2dppa) and bis(methylphosphonic acid) (H4dppp) derivatives (Fig. 1). The coordination study was designed with respect to the potential application in biomedicine and was focused mainly at the transition metals present in the living organisms (Cu, Co, Ni, Zn, Fe) or at those relevant for the radiomedical research (Cu, Ga).
Here, we optimized the synthesis of the tosylated macrocycle 3 by 1 + 1 cyclisation of 2,6-bis(bromomethyl)pyridine 1 and N,N′-ditosyl-2,6-bis(aminomethyl)pyridine 2 (Fig. 2). The reaction was carried out in a biphasic system using tetrabutylammonium iodide as a phase-transfer catalyst under modified conditions previously used for the synthesis of analogous tripyridinophane.40 The biphasic system used in this work was optimal for the cyclisation and, thus, the isolated yield (73%) was significantly higher than those reported in the works mentioned above. Removal of the tosyl groups in concentrated sulfuric acid proceeded almost quantitatively and, thus, dpph was isolated in 91% yield.
The acetate pendant arms were introduced by alkylation with chloroacetic acid.41 The phosphonate pendant arms were introduced by phospha-Mannich reaction with paraformaldehyde and diethylphosphite in pyridine, followed by removal of the ester groups in aqueous HCl, similarly as reported for related compounds.42 The reactions proceeded almost quantitatively and, thus, H2dppa and H4dppp were isolated in high yields of 92% and 83%, respectively. The NMR and MS spectra of the compounds are shown in Fig. S1–S21. The identity of H4dppp was also confirmed by determining its solid-state structure by X-ray diffraction analysis (Table S3 and Fig. S22). The molecular structure of H4dppp has a zwitterionic character – phosphonate pendant arms are mono-deprotonated, and both tertiary amino groups of the macrocycle are protonated.
K1 + log
K2) than in the pyclen and cyclen derivatives.
| Species | dpph | H2dppa | H4dppp | Pyclena | H2pc2a b | Cyclenc | H2do2a d |
|---|---|---|---|---|---|---|---|
| a Ref. 44, I = 0.1 M KNO3.b Ref. 45, I = 0.15 M NaCl.c Ref. 44, I = 0.1 M KCl.d Ref. 46, I = 0.1 M (NMe4)Cl.e Ref. 16.f Ref. 29, I = 0.15 M NaCl, I = 0.1 M KCl. | |||||||
Log K1 |
8.04 (8.27e) | 9.62 (9.57f) | 9.98 | 10.33 | 12.24 | 10.65 | 11.38 |
Log K2 |
7.28 (7.36e) | 5.89 (5.99f) | 8.54 | 7.83 | 5.97 | 9.64 | 9.62 |
Log K3 |
— | 2.27 (2.59f) | 6.44 | — | 3.47 | 1.5 | 3.95 |
Log K4 |
— | 1.33 (2.22f) | 3.90 | — | 1.99 | 0.7 | 2.62 |
Log K5 |
— | — | 0.91 | — | — | — | — |
Log K1 + log K2 |
15.32 | 15.51 | 18.52 | 18.16 | 18.21 | 20.29 | 21.00 |
In the series of the dpph derivatives, the macrocycle basicity follows the expected order dpph < H2dppa < H4dppp.43 The higher basicity of the latter two is given by the negative charge of the pendant arms (double negative in the phosphonate derivative) and participation of the pendant arms in the intramolecular hydrogen bonds, which stabilize the macrocycle protonation(s). Such hydrogen bonds stabilizing the protonation state are typical for acetate and phosphonate macrocyclic ligands.43 The following constants of H2dppa and H4dppp belong to protonation of the pendant arms, and they are in the range expected for protonation of carboxylate and phosphonate pendant arms.43
The stability constants of the NiII, CuII, and ZnII complexes were determined by means of potentiometric titrations. Whereas CuII and ZnII complexation was fast, NiII complexation was slow for the conventional setup of potentiometric titrations in the acidic pH region. Thus, the stability constants of the NiII complexes were determined by the out-of-cell method with three-week-long equilibration at room temperature. The data show very low abundances of free CuII and ZnII ions even at the beginning of the titrations (pH 1.7) in the systems with H2dppa and H4dppp. Thus, NMR and UV-vis titrations were performed in the strongly acidic region (pH 0–2) to determine the stability of the ZnII and CuII complexes, respectively. The NMR titrations could be used to evaluate formation of the ZnII complex in the strongly acidic region (Fig. S23 and S24). The free ligand and the ZnII complex are in a slow exchange and, thus, separate signals of both species were found in the spectra. The 1H NMR signals of pyridine groups were well resolved and separated and, thus, their integrals as a function of pH were used in the combination with potentiometric data for calculation of the corresponding stability constants in the ZnII–H2dppa and ZnII–H4dppp systems. In the ZnII–H4dppp system, 31P NMR data were also included.
However, measurement of the UV-vis spectra in the strongly acidic region showed that CuII complexes with H2dppa and H4dppp are almost fully formed already at pH 0. Thus, the corresponding stability constants were determined by competitive UV-vis titration with 2,3,2-tet (N,N′-bis(2-aminoethyl)-1,3-propanediamine) (Fig. S25 and S26). The studied ligands and 2,3,2-tet differ significantly in basicity44 and, thus, CuII ion is preferentially bound to the dpph derivatives in the acidic region, whereas the coordination to 2,3,2-tet dominates in the alkaline region. Thus, the competitive titrations were performed at pH 7.7 and 7.3 for H2dppa and H4dppp, respectively, where the conditional constants of the complexes of the competing ligands are comparable (Fig. S27). In the course of titration, the initial band of the CuII complex with the corresponding dipyridinophane ligand at 840 nm gradually changes into the signal of CuII-2,3,2-tet complex at 530 nm. The absorbances at both maxima as a function of pH were used in the combination with potentiometric data for calculation of the corresponding stability constants in the CuII–H2dppa and CuII–H4dppp systems. The spectra of the samples in the region, in which only one species is dominantly present, perfectly fit the spectra of particular complexes, that proofs negligible formation of the ternary species. The stability constants are listed in Tables 2 and S2, and the distribution diagrams are shown in Fig. 3 and S28–S33.
| Ligand | Equilibrium | NiII | CuII | ZnII |
|---|---|---|---|---|
| dpph | M + L ⇄ [M(L)] | 14.54 | 15.98 | 13.09 |
| [M(L)(OH)] + H+ ⇄ [M(L)] | 11.36 | 8.88 | 9.60 | |
| [M(L)(OH)2] + H+ ⇄ [M(L)(OH)] | — | 12.57 | — | |
| H2dppa | M + L ⇄ [M(L)] | 14.29 | 20.48 | 17.50 |
| [M(L)] + H+ ⇄ [M(HL)] | 2.83 | 2.24 | 2.35 | |
| [M(HL)] + H+ ⇄ [M(H2L)] | — | 2.04 | — | |
| [M(L)(OH)] + H+ ⇄ [M(L)] | — | 11.32 | 12.30 | |
| H4dppp | M + L ⇄ [M(L)] | 17.51 | 22.64 | 18.93 |
| [M(L)] + H+ ⇄ [M(HL)] | 6.46 | 6.20 | 5.80 | |
| [M(HL)] + H+ ⇄ [M(H2L)] | 4.96 | 4.76 | 4.45 | |
| [M(H2L)] + H+ ⇄ [M(H3L)] | — | 1.37 | — |
![]() | ||
| Fig. 3 Distribution diagrams of CuII–dpph (A), CuII–H2dppa (B) and CuII–H4dppp (C) systems (cCu = cL = 0.004 M, 25 °C). | ||
Dpph does not form protonated complexes due to the absence of the pendant arms. Thus, the [ML] species dominate in the acidic region in all systems. As the ligand does not saturate the metal ion coordination sphere, hydroxido complexes are formed in the alkaline region. H2dppa complexation starts with the formation of protonated complexes in the acidic region. Monoprotonated species are dominant at the beginning of titration in the systems with ZnII and NiII ions, whereas diprotonated species were found in the strongly acidic solutions in the CuII–H2dppa system. Corresponding protonation constants are close to those found for carboxylates in the free ligand, which indicates only a weak (or negligible) coordination of the pendant arms. In all H2dppa systems, [ML] is the dominant species over a broad pH region (pH 3–11), and the hydroxido complexes were found only in the strongly alkaline solutions. H4dppp forms protonated complexes along the whole acidic region. The first and the second protonation constants of the complexes (log
K1 = 5.8–6.5, log
K2 = 4.4–5.0) are in the common range reported for phosphonate groups in macrocyclic complexes.43 Similarly to the CuII–H2dppa system, additional protonation was also found in the CuII–H4dppp system and, thus, the triprotonated complex is the dominant species in the strongly acidic region. The stability constants of the dpph complexes follow the order CuII > NiII > ZnII, whereas the stability constants of the NiII and ZnII complexes are reversed for H2dppa and H4dppp, which can be explained by the high oxophilicity of the ZnII ion.
The comparison with related cyclen/pyclen-based ligands (Table 3) shows that the stability constants correlate with the macrocycle basicity. Thus, the stabilities of the complexes follow the order dpph < pyclen < cyclen. The same order is also observed for complexes of the acetate derivatives (H2dppa < H2pc2a < H2do2a), whose stability constants are mostly higher than those of the parent macrocycles due to additional coordination of the pendant arms. Stabilities of NiII complexes are somewhat out of the trends observed for other metal ions – [Ni(dppa)] being less stable than [Ni(dpph)]. It could be rationalized by labile coordination of the carboxylate groups of H2dppa, which was also observed in the solid state (see lower).
KML and free metal concentration pM (cM = 0.1 mM, cL = 1 mM, pH 7.4) of the studied complexes (I = 0.1 M (NMe4)Cl, 25 °C) and of complexes of related ligands
| Metal ion | dpph | H2dppa | H4dppp | Pyclena | H2pc2a b | Cyclenc | H2do2a d | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Log KML |
pM | Log KML |
pM | Log KML |
pM | Log KML |
pM | Log KML |
pM | Log KML |
pM | Log KML |
pM | |
| a Ref. 44, I = 0.1 M KNO3.b Ref. 45, I = 0.15 M NaCl.c Ref. 44, I = 0.1 M KCl.d Ref. 46, I = 0.1 M (NMe4)Cl. | ||||||||||||||
| NiII | 14.54 | 14.6 | 14.29 | 13.0 | 17.51 | 14.7 | 17.05 | 14.5 | — | — | 16.4 | 11.9 | — | — |
| CuII | 15.98 | 16.0 | 20.48 | 19.2 | 22.64 | 19.8 | 20.14 | 17.6 | 23.58 | 19.7 | 24.6 | 20.1 | 24.24 | 19.0 |
| ZnII | 13.09 | 13.1 | 17.50 | 16.2 | 18.93 | 16.1 | 14.40 | 11.9 | 19.49 | 15.6 | 16.2 | 11.7 | 18.86 | 13.6 |
As stability constants of the complexes typically correlate with protonation constants of the ligands, chelating abilities of the ligands for biomedical applications are often evaluated in the terms of pM values, i.e. negative logarithm of the free metal ion concentration at physiological pH. Thus, corresponding pM values of the discussed complexes were calculated and they are shown in Table 3. It is evident that chelating ability of the dipyridinophane ligands at physiological pH is comparable or even higher than those of the pyclen, cyclen and their diacetate derivatives and it could be clearly ascribed to the decreased basicity of macrocyclic nitrogen atoms in the dipyridinophane derivatives.
The complexes were prepared by a reaction of the ligand with the corresponding metal chloride, except the CoIII complex, which was formed by a reaction with CoCl2. Preparation of CoIII complex was performed in the presence of air during complexation and crystallization, which enabled oxidation of CoII to CoIII. The crystallographic data are summarised in Table S3, and selected geometric parameters of the metal ions' coordination spheres are listed in Table S4.
Metal ions in all divalent metal complexes exhibit a distorted octahedral coordination sphere in which the two pyridine moieties are coordinated in mutual cis positions, and the two aliphatic amino groups are bound trans to each other. The complexes [Cu(dpph)Cl2], [Ni(dpph)Cl2] and [Zn(dpph)Cl2], where the remaining two positions are occupied by chloride anions compensating the positive charge of the metal ion, have crystallographical C2-symmetry and their geometries are very similar due to isostructurality of [M(dpph)Cl2]·H2O·0.5iPrOH phases (Tables S3 and S4). Therefore, only one representative example is shown in Fig. 4A. The crystal structures of the complexes [Cu(dpph)Cl2] and [Zn(dpph)Cl2] with essentially the same lattice parameters (and also very similar geometries of the complex molecules) have already been deposited in the Cambridge Structural Database by others, but the disordered solvate molecules in these structures were treated using SQUEEZE.12,20 Therefore, we present the newly determined crystal structures here, as we successfully modelled the disorder of the solvent molecules of crystallisation. It should be noted that another crystalline phase has already been reported for the NiCl2–dpph system, [Ni2(dpph)2(µ-Cl)2]Cl2·2MeOH, where two [Ni(dpph)] complexes having a symmetry plane are connected through two bridging chloride ions into a centrosymmetric dimer.12,19 In the isostructural [Cu(dppa)] and [Ni(dppa)] complexes, the remaining sites of the octahedral coordination environment are occupied by carboxylate oxygen atoms of the pendant arms (Fig. 4B). The complex molecules have rough (not crystallographic) C2-symmetry, which is disrupted by different tilting of the pyridine rings (see below). In addition, another form of NiII complex of the composition [Ni(dppa)(H2O)2] was isolated (light purple needles compared to deep purple prisms of [Ni(dppa)]). In this complex, the coordination sphere is completed with two water molecules, and the carboxylate groups are not coordinated (Fig. 5). This fact is somewhat surprising as the carboxylic acid pendant arms are deprotonated, but do not form the chelate rings. The difference in the position of the metal ion in the macrocyclic cavity of both NiII complexes is negligible as could be documented on N–Ni–N distances and angles (Tables 4 and S4). In addition, the differences between metal ions in the isostructural complexes [M(dpph)Cl2] are bigger than difference between both forms of [Ni(dppa)] complex.
| Complex | ∢κ (°) | ∢N–M–M (°) | Complex | ∢κ (°) | ∢N–M–M (°) |
|---|---|---|---|---|---|
| a Ref. 12.b Ref. 19.c Ref. 31.d Two independent complex molecules.e Ref. 20. | |||||
| [Ni(dpph)Cl2] | 174.91(6) | 152.13(6) | [Cu(dppa)] | 174.18(7)/155.85(7) | 148.40(4) |
| [Ni2(dpph)2(µ-Cl)2]2+ | 175.4/179.0a | 152–153 | [Cu(H2dppa)Cl2] c,d | 163.0/178.2 | 147–148 |
| 175.6/178.7b | 175.0/177.1 | ||||
| [Cu(dpph)Cl2] | 175.71(6); 176.5e | 147.65(6) | {[Cu(Hdppa)]4}4+c | 158.7/176.5 | 147.26 |
| [Zn(dpph)Cl2] | 175.38(6); 173.2 a | 144.61(6) | [Co(dppa)]+ | 179.59(8)/178.83(9) | 167.95(6) |
| [Ni(dppa)] | 171.03(5)/157.91(6) | 155.53(4) | [Fe(dppa)Cl] | 179.14(9)/176.83(9) | 138.85(6) |
| [Ni(dppa)(H2O)2] | 169.40(5) | 153.88(5) | [Ga(dppa)]+d | 176.40(8)/172.45(9) | 143.09(6) |
| [Cu(H2dppp)]+ | 172.87(9)/171.05(8) | 145.42(5) | |||
| 169.95(6)/165.84(6) | 149.85(4) | ||||
Both phosphonate groups in the [Cu(H2dppp)] complex are monoprotonated, but only one of them is coordinated. The other phosphonate remains uncoordinated, and the last coordination site of the distorted octahedron is occupied by an oxygen atom of the phosphonate group, which is coordinated to the CuII ion in the neighbouring (centrosymmetry-related) complex unit (Fig. 6). The metal ions and the phosphonate groups of the bridging unit form an eight-membered metalla-ring, which is common for phosphonate complexes.47
To document the extent of a macrocycle geometric strain, we examined the angle between the idealised (mean) pyridine plane and the pyridine-metal coordination bond κ (Table 4). In the relaxed structures of dpph complexes, the angle is almost straight (κ = 175–176°), i.e., the metal ion lies in the direction of the lone electron pair of the nitrogen atom. This finding is consistent with the previously reported crystal structures.12,19,20 On the contrary, one of these angles is significantly bent (κ = 156–158°) in the strained structures of H2dppa complexes in which both pendant arms are coordinated. It confirms the steric strain of H2dppa when hexacoordinated to the CuII or NiII ions. Similar significant bending of one of the pyridine groups was previously observed in the crystal structure of {[Cu(Hdppa)]4}(ClO4)4·9H2O·3MeCN (κ = 159° and 177°),31 in which one of the pendant arms is protonated and only semi-coordinated to the central metal ion. However, this structure is complicated by the bridging of neighbouring units through the deprotonated acetate group into a cyclotetramer, which deforms the coordination environment. Decoordination of the pendant arms leads to a more relaxed geometry of the macrocycle in [Ni(dppa)(H2O)2] (κ = 169°), which is closer to the [M(dpph)Cl2] complexes. Analogous geometry was previously reported for the solid-state structure of [Cu(H2dppa)Cl2] with protonated and uncoordinated carboxylate groups (κ = 163/178° and 175/177° for two independent units, respectively).31 In the [Cu(H2dppp)] complex, coordination of only one pendant arm likely does not lead to a high geometric strain and, thus, the pyridine coordination angles are relatively straight (κ = 166° and 170°) when compared with the complexes of hexacoordinated H2dppa.
Exploring values of the trans angle N(amine)–M–N(amine), which is far from theoretical 180° (145–152°, Table S4), indicates that the divalent first-row transition metal ions (r = 83–88 pm)48 are too large for the cavity formed by hexacoordinated dipyridinophane. Complexes of trivalent metal ions behave differently. The CoIII ion fits the octahedral coordination environment defined by the dppa2− cavity much better due to its small radius (69 pm) as documented by the trans angle of 169° and almost straight coordination of the pyridine fragments (κ = 179°) in the [Co(dppa)]+ species (Fig. 7). However, for other trivalent metal ions FeIII and GaIII, heptacoordination was observed due to interaction of the [M(dppa)]+ species with the chloride ion (FeIII) or neighbouring complex molecules (GaIII). As more space is required for the additional three coordinated atoms over the M–dpph fragment, the trans N–M–N angle is bent 139–145° (Table S4), but the pyridine coordination angle is maintained straight in these complexes (κ = 177–179° and 171–176°, for [Fe(dppa)Cl] and [Ga(dppa)]+, respectively). The coordination sphere of [Fe(dppa)Cl] is close to a pentagonal bipyramid in which one pyridine is coordinated in the axial position and all other donor atoms of dppa2− form the equatorial pentagon N3O2. The second axial position is occupied by a chloride anion (Fig. 8). Pentagonal bipyramide has been commonly found in the crystal structures of the FeIII complexes,28 also with several examples ofapical chloride coordination.49–52 The coordination sphere of [Ga(dppa)]+ can be viewed similarly, but a carboxylate oxygen atom from the neighbouring complex unit is bound in the second apical position. Such a connection forms a cyclotetrameric structure [Ga(dppa)]44+ (Fig. 9). Also, the pentagonal base is more distorted from the ideal plane in this case. Heptacoordination of GaIII is less usual, and was observed, e.g., for mixed phenanthroline–carboxylato complex,53 or for GaCl2+ fragment complexed by 15-crown-5,54 where almost a regular pentagonal bipyramide with apical coordination of the chloride ions was observed. However, the pentagonally bipyramidal N–N3O2–O coordination sphere reported here is the first example. The tetrameric structural motif resembles that found previously in {[Cu(Hdppa)]4}(ClO4)4·9H2O·3MeCN,31 in which one carboxylate of each ligand bridges the tetrameric complex, whilst the other pendant arm is protonated and semi-coordinated. The heptacoordination and similar geometries of FeIII and GaIII complexes indicate that the [Fe(dppa)Cl] complex has a high-spin arrangement, as GaIII and high-spin FeIII ions have very similar ionic radii (76 and 78.5 ppm, respectively).
The NMR spectra were acquired at 25 °C on a Bruker 400 Neo or Varian S300 spectrometers. The experiments in non-deuterated water were acquired without water signal suppression. For 1H and 13C{1H} NMR measurements, the methyl signal of tBuOH was used as an internal standard (δ 1.25 and 30.3 ppm for 1H and 13C{1H} NMR, respectively); 31P NMR spectra were referenced to external 85% H3PO4 (δ 0.0 ppm). All values of chemical shifts are given in ppm, and coupling constants are given in Hz. Electrospray ionisation mass spectra (ESI-MS) and analytical HPLC-MS measurements were performed using a Waters Acquity QDa instrument equipped with dual orthogonal electrospray ionisation (ESI) at atmospheric pressure and a quadrupole mass analyser operating in the m/z range of 30–1250. HRMS measurements were performed on Orbitrap LTX XL Thermo. The UV-vis spectra were recorded on a Specord 50 Plus system (Analytic Jena).
The HPLC analyses were conducted with a silica-based reverse-phase column (Phenomenex Luna C18, 5.0 µm, 4.6 × 50 mm; dead time 0.5 min), using mobile phases 0.1% trifluoroacetic acid (TFA) in H2O and 0.1% TFA in acetonitrile (MeCN), applied with gradient: 0.0 min – 5% MeCN, 3.5 min – 100% MeCN, 4.0 min – 100% MeCN, 5.0 min – 5% MeCN (flow 1.2 ml min−1). Preparative chromatographic separations (“flash” chromatography) were carried out using an ECOM ECS28P0X system equipped with a UV-vis diode array detector (λ = 200–800 nm). Reverse-phase separation was performed using 40 or 120 g pre-packed columns (Phenomenex Luna C18, 5.0 µm) and a gradient elution with MeCN (5% to 100% in 40 min) in water with 0.1% TFA at a flow rate of 40 ml min−1.
1H NMR (CDCl3): 7.07 (t, 3JHH 7.6, 2H, py), 6.51 (d, 3JHH 7.6, 4H, py), 4.45 (s, 2H), 4.00 (s, 8H, CH2). 13C{1H} NMR (CDCl3): 159.1 (s, py), 135.8 (s, Py), 120.05 (s, py), 55.9 (s, CH2). MS(+): m/z 241.1 [M + H]+. Elemental analysis: found (calculated for C14H16N4·0.5H2O): C 67.37 (67.59), H 6.70 (6.88), N 22.16 (22.45).
1H NMR (D2O/NaOH, pH 13.0): 7.21 (t, 3JHH 7.7, 2H, py), 6.67 (d, 3JHH 7.7, 4H, py), 3.81 (s, 8H, py–C
2–N), 3.47 (s, 4H, C
2COO). 13C{1H} NMR (D2O/NaOH, pH 13.0): 180.3 (s, COO), 158.5 (s, py), 137.9 (s, py), 122.4 (s, Py), 64.0 (s,
H2COO), 63.8 (s, py–
H2–N). MS(+): m/z 357.1 [M + H]+. HPLC: 2.11 min. Elemental analysis: found (calculated for C18H20N4O6): C 60.32 (60.66), H 5.42 (5.66), N 15.35 (15.72).
1H NMR (D2O/DCl, pH 0.8): 7.75 (t, 3JHH 7.8, 2H, py), 7.27 (d, 3JHH 7.8, 4H, py), 4.82 (s, 8H, py–C
2–N), 3.90 (d, 2JPH 11.5, 4H, N–C
2–P). 13C{1H} NMR (D2O/DCl, pH 0.8): δ 151.0 (s, py), 142.3 (s, py), 125.0 (s, py), 61.7 (d, 3JCP 4.4 Hz, py–
H2–N), 55.8 (d, 1JCP 142 Hz, N–
H2–P). 31P NMR (D2O/DCl, pH 0.8): 11.73 (t, 3JPH 11.5 Hz). HPLC: 1.32 min. MS(+): m/z 429.1 [M + H]+. Elemental analysis: found (calculated for C16H22N4O6P2·1.5H2O): C 42.38 (42.20), H 5.31 (5.53), N 12.23 (12.30), P 14.06 (13.60).
K = 10.08, 9.26, 6.88, 5.45) and the stability constant of its CuII complex (log
K = 23.2) were taken from ref. 44. The stability constants of CuII complexes were determined by simultaneous treatment of the potentiometric and UV-vis competition data (absorbances at 535 nm and 840 nm as a function of 3,2,3-tet concentration) using the OPIUM program.59
When possible, all non-hydrogen atoms were refined anisotropically (some atoms of the disordered parts with low occupancy were refined isotropically). All hydrogen atoms were found in the difference density map. However, the hydrogen atoms bound to the carbon atoms were fixed in theoretical positions using Ueq(H) = 1.2 Ueq(C) to keep the number of refined parameters low. Full refinement of the hydrogen atoms bound to oxygen or nitrogen atoms was attempted. Sometimes, these hydrogen atoms had to be fixed in the original position of electron maxima if their full refinement led to unrealistic bond lengths.
In the crystal structure of (H4dppp)·3H2O, one formula unit forms the structurally independent part. All hydrogen atoms bound to the nitrogen and oxygen atoms were fully refined. In two close water molecules of crystallisation, one hydrogen atom was split in two half-occupied positions, forming alternative hydrogen bonds between the corresponding oxygen atoms. In the isostructural series of [M(dpph)Cl2]·H2O·0.5iPrOH (M = Ni, Cu, Zn), one-half of the formula unit forms the independent part. The macrocyclic complex possesses two-fold symmetry. The oxygen atom of the water molecule of crystallisation lies in a special position with half-occupancy, and the molecule of iPrOH is disordered around a special position with quarter-occupancy. The hydrogen atom of the water molecule was fully refined, and that of iPrOH was fixed in the original position using Ueq(H) = 1.2 Ueq(O). In the crystal structure of [Ni(dppa)(H2O)2]·2H2O, one-half of the formula unit forms the independent part. The molecule has two-fold symmetry. In the isostructural phases [M(dppa)]·2H2O (M = Ni, Cu), one formula unit forms the structurally independent part. One of the water molecules of crystallisation in the structure of the CuII complex was refined disordered in two close positions; the hydrogen atoms of this molecule were fixed in the original positions using Ueq(H) = 1.2 Ueq(O). Other water hydrogen atoms were fully refined. In the crystal structure of dimeric {[Cu(H2dppp)]2}·10H2O·2CH3COCH3, one half of the formula unit forms the structurally independent part. All oxygen-bound hydrogen atoms were fully refined. However, the acetone molecule of crystallisation was found disordered; the disorder was refined by splitting the methyl carbon atoms into two positions (refined occupancies 51
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49%) and fixing their hydrogen atoms using Ueq(H) = 1.5 Ueq(C), with the keto group shared. In the crystal structure of [Co(dppa)]Cl·4.5H2O, one formula unit forms the structurally independent part. The chloride counterion was found disordered. The disorder was treated by splitting into three close positions with refined occupancies 48
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46
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6%. The hydrogen atoms belonging to the water molecules were fixed in the original positions using Ueq(H) = 1.2 Ueq(O). In the crystal structure of [Fe(dppa)Cl]·4H2O, one formula unit forms the structurally independent part. A disorder of the water molecules of crystallisation was found, which could not be reliably modelled, and, thus, Platon SQUEEZE63 was used to subtract partial electron density corresponding to two water molecules from the independent part. The other two molecules were refined with hydrogen atoms fixed in the original positions (two hydrogen atoms split in two positions) with refined thermal factors. In the crystal structure of {[Ga(dppa)]4}Cl4·17H2O, one half of the tetramer forms the independent part. A complicated disorder was found in the channels formed in the crystal packing; the chloride counterions were split in several positions, and several water molecules of crystallisation were located, with their hydrogen atoms fixed in the original positions, using both thermal factor refinement and Ueq(H) = 1.2 Ueq(O) for some of them. Some remaining hard-to-interpret electron maxima of the disordered molecules were treated with Platon SQUEEZE;63 the subtracted density corresponds to 0.45Cl and 4.5H2O per the independent part.
The data supporting this article have been included as part of the supplementary information (SI). Supplementary information: synthesis and NMR spectra of the studied ligands, solid-state structures and crystallographic data, overall protonation and stability constants, NMR and UV-vis titrations and distribution diagrams. See DOI: https://doi.org/10.1039/d6ra00469e.
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