Open Access Article
Federica Grassoa,
Federica Turrini
*ab,
Marte Jenssenc,
Valentina Orlandid,
Aseel Swaidana,
Filippo Falcoa,
Kjersti Lianc and
Raffaella Boggiaae
aDepartment of Pharmacy, University of Genova, Viale Cembrano 4, 16148 Genova, Italy. E-mail: Federica.turrini@unige.it
bNational Center for the Development of New Technologies in Agriculture (Agritech), 80121 Napoli, Italy
cDepartment of Marine Biotechnology, Norwegian Institute of Food, Fisheries and Aquaculture Research (Nofima), Tromsø, Norway
dAimplas, Asociación de Investigación de Materiales Plásticos Y Conexas, Carrer de Gustave Eiffel, 4, 46980 Valencia, Spain
eNational Biodiversity Future Center (NBFC), 90133 Palermo, Italy
First published on 27th January 2026
Global fish production has risen significantly to meet the growing demand for protein- and oil-rich food sources, yet this expansion has also led to increased waste generation, raising environmental concerns. Within the Horizon2020 EcoeFISHent project, this study investigates the valorization of unsorted, dehydrated side-streams from the filleting of farmed sea bream and sea bass. At laboratory scale, three environmentally sustainable methods for crude oil extraction were compared: green solvent extraction, Microwave-Assisted Extraction coupled to green solvents, and Enzyme-Assisted Extraction. All approaches yielded satisfactory oil recovery (33–42%) and maintained lipid oxidation parameters within the acceptable limits defined by regulatory standards (Codex Alimentarius, CXS 329-2017), confirming the oxidative stability of the extracted oils under the tested conditions. Fatty acid methyl ester profiling revealed consistent lipid composition across methods, with all oils exhibiting a beneficial omega-6/omega-3 ratio (1.7–2.6), supporting their potential for nutraceutical applications. Enzyme-assisted extraction emerged as a particularly efficient and scalable approach enabling the simultaneous recovery of oil and protein hydrolysates. This method was selected for semi-pilot scale-up in a 30 L reactor, achieving yields of 25% (w/w) for oil and 16.5% (w/w) for protein hydrolysates, whose protein content is 84.6 ± 1.44% (w/w). These findings highlight the feasibility of recovering two high-value fractions suitable for use in nutraceuticals, cosmetics, and biomaterials, contributing to the sustainable valorization of fishery side-streams.
Sustainability SpotlightThis study, developed within the EU Horizon 2020 EcoeFISHent project (call: Green Deal), addresses the growing environmental and economic challenges linked to aquaculture waste. This study investigates the sustainable valorisation of side-streams from farmed sea bass and sea bream through eco-friendly oil extraction methods. Enzyme-assisted extraction (EAE) proved to be the most efficient and scalable strategy, enabling the recovery of oil and protein hydrolysates for potential use in nutraceuticals, cosmetics, and biomaterials. The approach supports circular economy principles and aligns with UN SDGs: SDG 12 (Responsible Consumption and Production), SDG 9 (Industry, Innovation and Infrastructure), SDG 14 (Life Below Water), and SDG 3 (Good Health and Well-Being). |
According to recent data from the Food and Agriculture Organization (FAO), global aquaculture production surpassed capture fisheries in 2022, reaching 130.9 million tons. In Italy, the aquaculture sector cultivates 25 species and is valued at approximately 400 million euros.6 To prevent overfishing and protect marine ecosystems, it is essential to manage undesired catches or by catches,-which include undersized, surplus, endangered, threatened, and protected species. This underscores the importance of adopting efficient and sustainable strategies for the utilization of aquaculture side streams.
To address these problems, the EU Commission has introduced the “Blue Growth” strategy, which aims for sustainable growth in marine and maritime sectors and reducing waste to meet the UN Sustainable Development Goals.4 The scientific community is actively working to valorize biomass that is typically discarded, aiming to isolate biomolecules that can be used for, among other applications, green and safe food ingredients or for other industrial applications. The EcoeFISHent project (Horizon 2020) aims to create sustainable regional clusters based on a multi-circular economy and industrial symbiosis.7 Its main goal is to boost financial returns for fisheries and aquaculture by utilizing underused biomass. In this context, the EcoeFISHent project explores valorization strategies, focusing on extracting valuable products from wild and aquaculture side-streams. In fact, fishery leftovers are usually rich in proteins, minerals, and lipids, and given the current global scenario regarding food security and availability, the loss of these important biomolecules is no longer acceptable.8
Among the various high-value compounds that can be extracted from fishery side-streams, fish oils are the most important. They are particularly rich in omega-3 polyunsaturated fatty acids (PUFAs), especially eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA).9,10 These bioactive compounds are widely utilized for nutraceutical and pharmaceutical applications due to their well-documented benefits in preventing and managing cardiovascular diseases, neurological disorders, and infant developmental issues.11,12 Wild caught and farmed fish – responsible for 90% of the global fish oil supply-have long been the primary sources of omega-3. Recent estimates indicate that the current global production of EPA and DHA is approximately 160
000 tons per year, with over 90% sourced from fisheries and aquaculture activities.13 However, as demand continues to surge, the search for sustainable alternatives has become increasingly urgent. For this reason, a promising economic and environmental strategy is to consider fish side-stream as valuable sources of bioactive compounds rich in PUFAs.14 At the same time, the development of eco-friendly and advanced technologies for efficient utilization of these side-streams is essential to address the growing challenges associated with the improper use of fish discards. The application of ultra-modern bio-intensified technologies such as enzymatic hydrolysis or Enzymatic Assisted Extraction (EAE), Supercritical Fluid Extraction (SFE), Pulsed Electric Field (PEF), High-Pressure Processing (HPP), extrusion, Microwave (MAE), and Ultrasound-Assisted Extraction (UAE) has been extensively researched.15,16
Recent advances in SFE have demonstrated improved selectivity and recovery of polyunsaturated fatty acids from marine sources, with optimized pressure and temperature conditions enhancing extract quality.17 Similarly, UAE has gained attention for its ability to intensify lipid extraction through cavitation effects.18
EAE has emerged as a green and selective method for lipid recovery, leveraging specific enzymes to disrupt cell walls and enhance solvent penetration, thereby increasing yield and preserving bioactivity.19
In MAE, microwave irradiation causes dipole rotation and ionic conduction within the sample, leading to rapid internal heating. This disrupts hydrogen bonds and weakens cell wall integrity, accelerating lipid diffusion into the solvent. The technique is especially efficient for extracting lipids from microalgae and fish tissues, preserving polyunsaturated fatty acids thanks to short exposure times.20 In parallel, the use of green solvents such as ethanol, aqueous ethanol, and deep eutectic solvents is gaining traction as sustainable alternatives to traditional organic solvents like hexane, due to their lower toxicity, biodegradability, and compatibility with food-grade applications.21
This study, summarized in Fig. 1, explores the potential of using fish biomass as an innovative source of bioactive compounds. The biomass consists of dehydrated, mixed side-streams from seabream (Sparus aurata) and seabass (Dicentrarchus labrax) filleting—including skin, head, tail, bones, and bowels—supplied by the Italian aquaculture company Aqua de Mâ, located in the Gulf of Tigullio, near Lavagna (Genova, Italy). The novelty of this study lies in the upcycling of unsorted fish biomass to extract lipids using green technologies. Several extraction methods were investigated for the recovery of crude oil from side streams of sea bass and sea bream. Conventional solid–liquid (S/L) extraction was performed using green solvents such as ethyl acetate and ethanol (a). These solvents were also employed in microwave-assisted extraction, initially based on parameters reported in the literature (b_1) and subsequently optimized (b_2). In addition, enzymatic extraction approaches were explored using two food-grade proteases: alcalase 3G PBN-66 L (c_1), a serine hydrolase of the subtilisin family produced via controlled fermentation of Bacillus licheniformis, and Corolase® 8000 (c_2), a fungal alkaline protease commonly applied in the hydrolysis of animal proteins to assess any possible differences in terms of oil recovery. Conditions where enzymes were omitted (c_3) were also evaluated to assess their impact on oil yield and quality.
Unlike conventional approaches that rely on sorted side-streams like fish skins or fish viscera, this study utilizes mixed filleting leftovers and undersized fish as the starting material. One of the key innovations is the cost-effective valorization of fish side-streams. Sorting individual parts of the fish is one of the most resource-intensive steps for small-scale fisheries. This makes recovery of side-stream particularly challenging in countries like Italy, where many small aquaculture farms discard or underutilize these resources due to the high costs of side-streams classification. Moreover, this method can be also applied to unwanted catches, enabling full utilization of these resources without the need for sorting.22
To address the logistical and utilization issues linked to the rapid perishability of fish side-streams, the biomass is first homogenized using a knife mill, ensuring uniform particle size and texture. This preparatory step facilitates subsequent industrial dehydration, which is carried out through a patented process operating under mild temperature and pressure conditions, preventing biomass degradation, such as lipid oxidation.23 The method guarantees microbiological stabilization and allows for the treatment of up to 120 kg h−1 of side streams. This step is crucial for improving logistics, as it eliminates the need for a costly cold chain, allowing unconventional biomass to be stored and handled at room temperature.
This innovative biomass provides an additional source for obtaining fish oil. When extracted using green technologies under mild conditions, it yields a high-quality product that, in many cases, can be used as is, eliminating the need for the costly refining process. Thus, three different green extraction methods were compared at laboratory scale to select a favorable process for upscaling at semi-pilot scale (30 L), providing good results in terms of yield, quality parameters, and fatty acid composition.
![]() | ||
| Fig. 2 Samples of unsorted side streams of seabream and seabass before (FM) and after stabilization with a patented dehydration procedure (DFM). From left to right: unground fresh leftovers, ground fresh leftovers (FM), and a dehydrated fish mix (DFM) exhibiting an oily/creamy texture with almost no water content (see Table 2). | ||
For comparative purposes, two conventional sorted biomasses, fish skin and viscera, from the same aquaculture company were also analyzed for their proximate composition. The two samples, namely Dehydrated Fish Skin (DFS) and Dehydrated Fish Viscera (DFV) (Fig. 3) were processed using the same patented dehydration process described above.
![]() | ||
| Fig. 3 Samples of sorted side streams of skin and viscera of seabream and seabass after stabilization with a patented dehydration procedure (DFS and DFV). From left to right: dehydrated fish skin (DFS), exhibiting a solid texture, and dehydrated fish viscera (DFV), exhibiting an oily/creamy texture (see Table 2). | ||
:
2:1 ratio (v/v/v). The samples were directly weighed into Pyrex tubes, the TBARS solution was added, and the tubes were incubated for 2 hours at 95 °C in a water bath (E200, LAUDA, Germany). The tubes were then quickly cooled with tap water. A calibration curve was created in the range of 0.61–6.10 µM using MDA (1,1,3,3-tetramethoxypropane) as the standard, and the absorbances were measured at 532 nm using a UV-Visible spectrophotometer (Agilent Cary 100 Varian Co., Santa Clara, CA, USA).
The mass of the initial biomass used for extraction and the total lipid content determined by the Hara–Radin defatting method (ref)30 were considered when calculating yield and recovery (eqn (1) and (2) provided below). The oil was stored in a dark dryer until constant weight.
![]() | (1) |
![]() | (2) |
The recovery (%) was considered as the response variable. 14 experiments were carried out, plus three experiments corresponding to the central point in the model to estimate the experimental variability, for a total of 17 experiments (2k + 2k + N; k = 3, N = 3) planned to be performed randomly (refer to Table 3 for the experimental matrix/plan).
The postulated mathematical model is reported in eqn (3) below:
| Y = b0 + b1X1 + b2X2 + b3X3 + b12X1X2 + b13X1X3 + b23X2X3 + b11X12 + b22X22 + b33X32 | (3) |
The extraction was performed, according to the experimental plan, in an orbital shaking incubator (SKI 8R, Argo Lab, Kunshan, China) at 22 °C, protecting the flasks from light during the whole extraction to prevent oxidation. The extraction temperature of 22 °C was selected as a representative value for ambient laboratory conditions, reflecting the intention to perform the extraction under mild, non-thermal conditions, minimizing the risk of lipid oxidation or degradation while ensuring reproducibility across experiments. Therefore, a centrifugation step (4 °C, 15 min, 4200 rpm) followed and the upper phase was filtered with sodium sulphate and recovered; finally, a Rotavapor R-100 (BÜCHI Labortechnik AG, Switzerland), with a rotating bath heated up to 37 °C and away from light, was employed to vaporize the solvents mixture. The oil was placed in a dark dryer until constant weight, and the results were expressed in terms of yield and recovery (eqn (1) and (2)).
:
10 (w/v) and 25% ethanol. This latter used a solvent mixture of ethyl acetate/ethanol in a 3
:
1 ratio (v/v), and a solid/solvent ratio of 1
:
10 (w/v). Using a maximum extraction power of 1000 W, the samples were initially pre-heated for 2 minutes, then they were heated to 60 °C for 15 minutes, followed by a cooling period to 25 °C for an additional 15 minutes. After the extraction, a filtration with filter paper (4–12 µm) using a drying agent as sodium sulphate was performed to recover the extracts. At the end, a Multivapor system (Multivapor P-12, BÜCHI Labortechnik AG, Switzerland) with a rotating bath heated up to 37 °C and away from light, was used to evaporate the solvent mixture. The oil was placed in a dark dryer until constant weight, and the results were expressed in terms of yield and recovery (eqn (1) and (2)).
:
2 ratio (w/v) avoiding the increase of pH. Enzyme concentration of 0.25% was tested, and reactions were conducted for 1 h at 60 °C by constantly stirring the flasks with an orbital shaking incubator (SKI 8R, Argo Lab, Kunshan, China). At the end of the extraction, the enzyme was inactivated in a water thermostatic bath (E200, LAUDA, Germany) for 15 minutes at 90 °C. Subsequently, the mixture was stored at 4 °C overnight to allow separation of the liquid and solid phases. Therefore, a centrifugation step (25 °C, 20 minutes, 4200 rpm) occurred to separate the liquid from the solid: the upper phase, containing the oil was manually recovered, while the emulsion and the aqueous phases were centrifugated again (4 °C, 20 minutes, 4200 rpm) in small vials to isolate the remaining lipids still present in the emulsion. The corresponding yields and recoveries were calculated as previously reported.For comparison, the same protocol was followed, omitting only the addition of the enzyme, to evaluate any differences in oil recovery (aqueous extraction, c_3).
| TOTOX = 2PV + AV | (4) |
Fatty acid methyl esters (FAME) were prepared from the lipid extracts following the sequential alkaline–acid transmethylation procedure according to ISO 12966-2:2017.38 Briefly, 1 g of lipid extract was reacted with methanolic sodium methoxide to trans-esterify glycerides. Subsequently, a methanolic acid catalyst (methanol
:
sulfuric acid 9
:
1, v/v) was added to esterify free fatty acids and residual acyl groups. The resulting FAME were recovered in hexane.
FAME analysis was performed using an Agilent 7890A GC system in accordance with ISO 12966-4:2015.39 Separation was achieved on a highly polar RTX-2330 capillary column (90% biscyanopropyl/10% phenylcyanopropyl polysiloxane; 60 m × 0.25 mm i.d., 0.20 µm film thickness; Restek Corp., Bellefonte, PA, USA). FAMEs were identified by comparison of retention times with a standard mixture (SUPELCO® 37 Component FAME Mix, Merck/Sigma-Aldrich, Darmstadt, Germany). The GC operating conditions were oven temperature from 50 °C (2 min) to 240 °C (15 min) at 2 °C min; injector and detector temperatures at 250 °C; helium carrier gas at a constant linear velocity of 30 cm s; injection volume 1 µL (in duplicate); split ratio 1
:
50.
The proximate analysis of the unconventional biomass after dehydration (DFM) was compared to the proximate analysis of two sorted biomasses—skin and viscera—from the same fishery side-streams namely DFS and DFV, respectively. Due to the high heterogeneity observed among batches—each consisting of varying fractions of industrial fish by-products—sampling and related analyses were conducted repeatedly across numerous batches throughout one year of production (year 2022). The results of the average proximate composition of the DFM are presented as ranges and mean values, reflecting the significant variability inherent to the different batch composition, while for DFS and DFV, the results were reported as average and standard deviation (Table 2).
| DFM (g/100 g) | DFS (g/100 g) | DFV (g/100 g) | |
|---|---|---|---|
| a Results are expressed as range and mean value (in brackets).b Results are expressed as mean ± SD (n = 2). | |||
| Residual moisturea,b | 1–3 (1.2) | 5.0 ± 0.4 | 4.5 ± 0.4 |
| Crude proteinsa,b | 39–48 (42.3) | 59.9 ± 4.2 | 15.2 ± 0.1 |
| Ashesa,b | 10–17 (14.8) | 17.8 ± 0.1 | 2.5 ± 0.1 |
| Lipidsa,b | 27–46 (34) | 17.4 ± 1.1 | 55.8 ± 6.8 |
| TBARS (mmol MDA/kg)b | 1.4 ± 0.5 | 0.8 ± 0.1 | 2.3 ± 0.4 |
Thanks to the dehydration process, fats, proteins and ashes were concentrated in all the samples and the water was barely absent, resulting in an improvement in the extractability of the lipids. Based on the proximate analysis results, although the viscera naturally contain the highest lipid content, the unsorted sample (DFM) exhibited a particularly intriguing composition for lipid extraction, facilitating their upcycling. Moreover, the TBARS test was conducted directly on the samples (DFM, DFS, DFV), confirming the high quality of the starting biomass. The short supply chain between the aquaculture farm—crucial for preserving freshness—and the mild dehydration facility likely play a key role in limiting oxidative stress. This hypothesis is further supported by a comparative analysis with similar, unsorted tuna side-streams processed using the same dehydration method, which exhibited higher TBARS values.25,42 These differences are likely attributable not only to species-specific and compositional factors, but also to the longer and more complex supply chain typically associated with tuna processing.
A Design of Experiment (DoE) approach was utilized to optimize oil extraction using green solvents (ethanol and ethyl acetate mixture) from DFM biomass. The experiments were conducted randomly, and the results are presented in Table 3, expressed as both yield (%) and recovery (%), relative to a chosen reference method, to account for the intrinsic variability of different batches of organic biomass, as previously discussed. The reference method selected for determining the total lipid content in fish samples was the Hara–Radin protocol,30 a cold solid/liquid extraction using a hexane/isopropanol mixture, as recommended by Ramalhosa et al.50 and confirmed by numerous experiments carried out with similar fish matrices by the authors.42 The method was preferred to the traditional Folch,44,45 to avoid the use of halogenated solvents, i.e. chloroform, and to the official Soxhlet, which is considered too highly energy-consuming and highly impactful on thermosensitive compounds.51
| X1 solid/solvent (w/v) | X2 time (min) | X3 EtOH (%) | Yield (%) | Recovery (%)a | |
|---|---|---|---|---|---|
| a Recovery was calculated based on a 34% yield of total lipids, as determined using the extraction protocol described by Hara and Radin.30 | |||||
| 1 | −1 (1 : 2) |
−1 (30) | −1 (0% EtOH) | 31.3 | 92.1 |
| 2 | 1 (1 : 10) |
−1 (30) | −1 (0% EtOH) | 32.7 | 96.0 |
| 3 | 0 (1 : 5) |
0 (105) | −1 (0% EtOH) | 31.7 | 93.1 |
| 4 | −1 (1 : 2) |
1 (180) | −1 (0% EtOH) | 20.8 | 61.3 |
| 5 | 1 (1 : 10) |
1 (180) | −1 (0% EtOH) | 30.9 | 91.0 |
| 6 | 0 (1 : 5) |
−1 (30) | 0 (25% EtOH) | 31.9 | 93.8 |
| 7 | −1 (1 : 2) |
0 (105) | 0 (25% EtOH) | 26.7 | 78.5 |
| 8 | 0 (1 : 5) |
0 (105) | 0 (25% EtOH) | 31.1 | 91.4 |
| 9 | 1 (1 : 10) |
0 (105) | 0 (25% EtOH) | 33.5 | 98.4 |
| 10 | 0 (1 : 5) |
1 (180) | 0 (25% EtOH) | 30.8 | 90.5 |
| 11 | −1 (1 : 2) |
−1 (30) | 1 (50% EtOH) | 26.7 | 78.4 |
| 12 | 1 (1 : 10) |
−1 (30) | 1 (50% EtOH) | 33.4 | 98.2 |
| 13 | 0 (1 : 5) |
0 (105) | 1 (50% EtOH) | 31.8 | 93.4 |
| 14 | −1 (1 : 2) |
1 (180) | 1 (50% EtOH) | 20.7 | 60.9 |
| 15 | 1 (1 : 10) |
1 (180) | 1 (50% EtOH) | 33.2 | 97.7 |
| 16 | 0 (1 : 5) |
0 (105) | 0 (25% EtOH) | 32.4 | 95.2 |
| 17 | 0 (1 : 5) |
0 (105) | 0 (25% EtOH) | 31.3 | 92.1 |
Table 3 shows data from a single batch. Later analyses were done on other batches, which had slightly different lipid contents (though still within the range reported in Table 3). To make results comparable across batches, results are expressed as recovery percentages.
The analysis of the results enabled the quantification of the following model coefficients using recovery (%) as the response variable (eqn (5)):
| y = 93.7 (***) + 11.0 x1 (***) − 5.7 x2 (***) − 0.5 x3 + 5.3 x1x2 (**) + 2.9 x1x3 (*) + 2.2 x2x3 − 5.9 x12 (*) − 2.2 x22 − 1.1 x32 | (5) |
They are graphically shown in Fig. 5. Stars represent the statistical significance (p-value; * = 0.05, ** = 0.01, *** = 0.001).
![]() | ||
| Fig. 5 The coefficients of the models obtained by the FCCCD (p-value * = 0.05, ** = 0.01, *** = 0.001). | ||
From the coefficient plot (Fig. 5), it is evident that the linear terms X1 (ratio: solid-to-solvent ratio) and X2 (time) (***: p < 0.005), the first two interactions, namely X1X2 (ratio-time; **: p < 0.01) and X1X3 (ratio-ethanol; *: p < 0.05), and the quadratic term X12 (ratio–ratio; *: p < 0.05) significantly influence the response. Specifically, regarding the linear terms, the variable ratio (X1) positively influences the response, meaning the yield of extracted fish oil increases with the amount of solvent used, while the extraction time (X2) is inversely proportional to the extraction yield.
The results indicate that the optimal conditions are represented by a solid/solvent ratio of 1
:
10 (w/v), a solvent ratio of 25% EtOH/75% EtOAc, and an extraction time of 105 minutes. As highlighted by the Response Surface Recovery (Fig. 6), the DoE approach revealed several favorable conditions yielding over 90%, demonstrating the robustness and flexibility of the process. Among these optimal scenarios evaluated, the selected condition was the one that ensured the highest yield. However, other configurations also proved to be optimal, as they offered advantages such as reduced processing time and/or solvent consumption, with only a moderate compromise in terms of yield. This choice aligns with the core principles of DoE, which emphasize not only performance maximization but also practical applicability and balance among multiple factors.52 The yield could achieve more than 90% while saving time and solvent if the extraction time was shortened to 30 minutes and the solid/solvent (w/v) ratio was lowered to 1
:
5 but avoiding the 1
:
2 (w/v) one. It is worth considering the high cost of solvents, too, especially in anticipation of upscaling the process at an industrial level. Furthermore, it is important to consider that prolonged processing times significantly influence oxidative processes. Similarly, the solid/solvent ratio (w/v) plays a critical role, as larger volumes require extended evaporation times under vacuum at mild temperatures (e.g., 37 °C). Although vacuum evaporation at such temperatures helps preserve thermolabile compounds and mitigates oxidation, it inherently demands longer durations, particularly when handling greater solvent volumes.
| Yield (%)a | Recovery (%) | |
|---|---|---|
| a Results are reported as mean ± SD (n ≥ 2). | ||
| ref_S/L cold extraction with Hara–Radin method30 | 42.1 ± 3.0a | 100 |
| a_S/L green solvents | 34.4 ± 4.2ab | 81.6 |
b_1 MAE lit34(ethyl acetate : ethanol 2 : 1, v/v) |
34.8 ± 0.3ab | 82.7 |
b_2 MAE opt (ethyl acetate : ethanol 3 : 1, v/v) |
41.8 ± 1.6ab | 99.3 |
| c_1 EAE, 3G PBN-66 L enzyme | 32.6 ± 0.2b | 77.4 |
| c_2 EAE, Corolase® 8000 enzyme | 34.0 ± 1.9ab | 80.7 |
| c_3 water | 35.2 ± 2.4ab | 83.6 |
Table 4 shows both the yields and the recovery (%) of each oil obtained using the conventional S/L cold extraction using ethyl acetate
:
ethanol (3
:
1, v/v) (a), as well as MAE using ethyl acetate
:
ethanol (2
:
1, v/v) (b_1), ethyl acetate
:
ethanol (3
:
1, v/v) (b_2), EAE (c_1, c_2) and water (c_3). As shown in the table, the extraction method, the type of solvent and the ratio (w/v) used for extraction influenced the oil yield (%). The One-Way ANOVA analysis (F (6, 7) = 5.476, p = 0.021), followed by Tukey's post hoc test, reveal statistically significant differences in lipid yield among the reference method (ref_S/L cold extraction with Hara–Radin method) and the EAE method (c_1). As previously mentioned, another batch of the same DFM biomass was used, and all the extraction methods were repeated in replicates for consistency. A yield of 34.4 ± 4.2% was achieved using the S/L cold extraction method under conditions determined by the previous DoE (a),53 (1
:
10 w/v, 105 min and 25% EtOH), corresponding to a recovery of about 82%. To enhance the yield, MAE was performed using the same green solvents (ethanol
:
ethyl acetate) but following the conditions recommended by Costa et al.,34 with a solvent mixture ratio of 2
:
1 (v/v) (b_1). This resulted in a yield of 34.8 ± 0.3%, showing no significant improvement in yield compared to extraction without microwaves, although it did offer a substantial time-saving advantage. The conventional extraction method takes approximately 105 minutes per sample, whereas MAE reduces this to 17 minutes of extraction followed by 15 minutes of cooling. Additionally, the ETHOS-X microwave system (Milestone S.r.l., Sorisole, Bergamo, Italy) allows for simultaneous processing of up to 15 samples, increasing overall efficiency.
The highest yield (41.8 ± 1.6%) was obtained using MAE with a 3
:
1 (v/v) ethyl acetate/ethanol ratio, which corresponds to the optimized condition identified in the previous design of experiments (DoE, condition a) When comparing the same solvent system and ratio (3
:
1), MAE proved more effective than conventional solid–liquid (S/L) extraction, (41.8 ± 1.6% vs. 34.4 ± 4.2%).
Unlike traditional extraction techniques, MAE employs electromagnetic waves to enhance solvent penetration and facilitate the release of target analytes from the matrix. This mechanism increases extraction efficiency while significantly reducing processing time.54 These findings support the observed improvement in oil yield with MAE, even when the solvent composition and ratio were kept constant.
Furthermore, the increased oil yield observed when shifting the solvent ratio from 2
:
1 to 3
:
1 (v/v) is attributed to the higher proportion of ethyl acetate, a more non-polar solvent than ethanol. Ethyl acetate exhibits greater affinity for lipophilic compounds, enhancing their solubility and interaction with the matrix. This results in more efficient extraction of non-polar constituents at higher ratios.
To enable microwave transmission in the apolar solvent system, a button made of Milestone's patented Weflon™ material was inserted as a coupling agent. Weflon™, a proprietary dielectric material, absorbs microwave energy and transfers heat to the surrounding apolar medium, which otherwise would not interact effectively with microwave radiation. This setup ensures efficient energy transfer and enables the successful application of MAE in non-polar environments. Although MAE using Weflon™ has demonstrated promising laboratory-scale results, its translation to industrial settings faces notable limitations. Weflon™ is a proprietary dielectric material, and its restricted availability and potentially high cost may hinder large-scale implementation, particularly in continuous processing environments. Furthermore, its long-term durability under sustained microwave exposure and in contact with volatile solvent mixtures remains to be thoroughly assessed. Industrial integration would necessitate custom-designed microwave reactors compatible with Weflon™, which could significantly increase capital expenditure and operational complexity. Additionally, the use of low-polar solvents such as ethyl acetate in microwave-assisted systems introduces safety concerns due to their flammability and volatility, requiring stringent process controls and specialized equipment. Therefore, while MAE with Weflon™ offers high extraction efficiency at laboratory scale, its industrial applicability depends on further engineering validation and cost-benefit analysis.
EAE is one of the most remarkable green lipid extraction methods available.55–57 EAE minimizes the use of toxic solvents, thereby lowering environmental impact and improving safety for both operators and end-users. From an economic perspective, while enzyme costs may be non-negligible, the reduction in solvent handling, disposal requirements, and potential regulatory burdens can offset these expenses, especially in large-scale or food-grade applications.58 This kind of extraction has been shown to improve the extraction efficiency of lipids and lipophilic substances such as vitamins.59 It also separates the protein fraction, yielding low molecular weight peptides,42,60 and the lipid fraction using the aqueous phase–organic phase separation principle.
Despite its environmental advantages, EAE demonstrated slightly lower performance compared to organic solvent extraction in several cases, including the present study (see Table 4). Organic solvents, due to their stronger affinity for lipophilic compounds and more aggressive extraction capabilities, often result in a little higher yield.
Nevertheless, EAE offers several advantages over organic solvent-based methods, both in terms of cost-effectiveness and extraction versatility. In particular, EAE enables the simultaneous recovery of hydrolyzed peptides along with lipids, thanks to enzymatic breakdown of the protein matrix and the use of aqueous–organic phase separation (Fig. 7). This dual recovery makes EAE a valuable approach when both lipid and protein fractions are of interest, especially in food and nutraceutical applications.
EAE is indeed regarded as the most scalable method due to its low costs, use of simple equipment, and the ability to simultaneously valorize the protein fraction.25,42 Although the hexane/isopropanol method (ref) and optimized microwave extraction (b_2) have produced higher yields (42.1 ± 3.0 and 41.8 ± 1.6, respectively), the lipid yields obtained through EAE were considered good: approximately 33% using 3G-PBN-66L (c_1) and 34% with Corolase® 8000 (c_2). These values are comparable to those obtained using water alone (c_3) (around 35%), as well as those achieved through conventional solid–liquid extraction with green solvents (a) (34.4%) and MAE (b_1) (approximately 35%).
Although the extraction yields obtained with enzymatic hydrolysis and water-only treatment were comparable, the use of enzymes was preferred due to their ability to promote the release of low molecular weight peptides. These peptides are particularly relevant for applications in the nutraceutical and cosmetic fields, where bioactivity and absorption are often enhanced by reduced molecular size.61 Thus, enzymatic treatment was selected not solely for efficiency, but for its capacity to generate functionally valuable compounds.
| Acidity (% oleic Acid)a | PVa | AVa | TOTOXa | |
|---|---|---|---|---|
| a Results are expressed as mean ± SD (n = 2). | ||||
| ref_S/L cold extraction with Hara-Radin method30 | 2.8 ± 0.1b | 6.91 ± 0.1a | 1.0 ± 0.3a | 14.82 ± 0.30a |
| a_S/L green solvents | 3.2 ± 0.1a | 1.77 ± 0.04b | 1.6 ± 0.1a | 5.08 ± 0.10b |
b_1 MAE lit34 (ethyl acetate : Ethanol 2 : 1, v/v) |
3.4 ± 0.1a | 1.36 ± 0.20b | 2.1 ± 0.2a | 4.77 ± 0.61b |
b_2 MAE opt (ethyl acetate : Ethanol 3 : 1, v/v) |
3.2 ± 0.1a | 2.11 ± 0.88b | 1.7 ± 0.2a | 5.86 ± 1.98b |
| c_1 EAE, 3 G PBN 66L enzyme | 3.3 ± 0.1a | 2.57 ± 1.66b | 1.6 ± 0.2a | 6.68 ± 3.11b |
| c_2 EAE, Corolase® 8000 enzyme | 3.4 ± 0.1a | 1.71 ± 1.12b | 1.8 ± 0.1a | 5.17 ± 2.16b |
| c_3 water | 3.4 ± 0.1a | 0.55 ± 0.26b | 1.2 ± 0.7a | 2.29 ± 0.18b |
All the extracted oils exhibited exceptionally low oxidation parameters, fully compliant with Codex Alimentarius standards, with TOTOX values significantly below the maximum permitted limit of 26. Therefore, the results confirmed their excellent oxidative stability and high overall quality. The One-Way ANOVA analysis (F (6, 7) = 11.697, p = 0.002), followed by Tukey's post hoc test, reveals statistically significant differences in TOTOX among the reference method (ref_S/L cold extraction with Hara–Radin method) and all the other extraction methods. No statistically significant differences were observed among the six green extraction methods (One-Way ANOVA analysis F (5,6) = 1.412, p = 0.340). With respect to acidity, the measured values were slightly above the Codex Alimentarius threshold yet remained consistent across the various extraction methods evaluated. The One-Way ANOVA analysis (F (6,7) = 12.037, p = 0.002), followed by Tukey's post-hoc test, reveals statistically significant differences in acidity among the reference method (ref_S/L cold extraction with Hara–Radin method) and all the other extraction methods. No statistically significant differences were observed among the six green extraction methods (One-Way ANOVA analysis F (5,6) = 3.720, p = 0.070).
All the crude oils demonstrated superior oxidative stability compared to values reported by Šimat et al. for oils obtained through industrial tricanter-type decanter centrifuge.65 Both primary and secondary oxidation indicators were consistently lower, resulting in a more favorable TOTOX index. These findings suggest that the applied extraction method may better preserve the oxidative integrity of the oil, despite its less industrialized nature. The only parameter in which the tricanter-derived oil showed an advantage was free fatty acid content (FFA), with a reported value of 2.0%. This difference is likely due to the post-extraction drying step commonly implemented in industrial processes. Drying reduces residual moisture, thereby limiting hydrolytic degradation of triglycerides and lowering FFA levels.
:
0, C16
:
0, C18
:
0, C18
:
1), as indicated by the exclusive assignment of the letter “a” compared with the reference and other extraction approaches. Conversely, the reference method and some alternative techniques (MAE and EAE) often exhibited intermediate values, sharing statistical groupings with treatments showing either higher or lower results, thus indicating partial overlap and the absence of statistically significant differences.
For polyunsaturated fatty acids, including the omega-3 and omega-6 series, significant differences among extraction methods were also observed. In particular, the reference method (ref) and aqueous extraction (c_3) consistently showed higher contents of long-chain omega-3 fatty acids, such as EPA (C20
:
5) and DHA (C22
:
6), as indicated by shared superscript letters and significantly higher values for these compounds. Despite these differences, the overall fatty acid profiles remained largely comparable among samples, as confirmed by PCA analysis (Section 4.1). Consistently, the ω6/ω3 ratio was significantly lower in oils obtained by the reference and aqueous extraction methods, suggesting a more favourable nutritional profile.
Oleic acid (C18
:
1, omega-9) was the predominant fatty acid in all samples, ranging from 39.1% to 43.2%, reflecting the typical monounsaturated fatty acids (MUFAs)-rich nature of fish oil. Linoleic acid (C18
:
2, omega-6) was consistently present across all extracts, with the highest levels observed in the reference method (ref) (18.7%), followed closely by the EAE (c_2) (18.5%) and aqueous (c_3) (18.4%) samples. DHA (C22
:
6) showed the highest recovery in the aqueous extract (c_3), (4.7%), followed closely by the reference method (ref) (4.6%), indicating that both water-based and conventional solvent-based extractions are effective in preserving this highly unsaturated fatty acid, with no significant difference between the two methods. Intermediate DHA levels were observed in c_1 (EAE, 3.5%), MAE lit. (b_1) (3.2%), and MAE opt. (b_2) (3.0%). EPA (C20
:
5) followed a similar trend, with the highest concentrations detected in the reference (ref) (2.3%) and aqueous (c_3) (2.3%) extracts. Lower EPA levels were observed in the green solvent extract (a) (1.2%), and modest recovery was noted in the MAE and EAE samples (ranging from 1.6% to 1.8%). The fatty acid profiles obtained from different extraction methods revealed that aqueous extraction (c_3) and the reference method (ref) yielded the highest concentrations of PUFAs, especially EPA and DHA, while green solvent-based methods (particularly a and b_2) showed enrichment in MUFAs, especially oleic acid (C18
:
1).
This trend can be explained by the partitioning behavior of lipids during extraction, influenced by both solvent polarity and lipid localization in the tissue matrix. PUFA-rich lipids, such as phospholipids and free fatty acids, are often associated with membrane structures and may be more accessible in aqueous environments, especially when aided by enzymatic hydrolysis (c_1, c_2) or simple water extraction (c_3). These methods promote the release of membrane–bound lipids without disrupting their structure, and the mild conditions (60 °C, no organic solvents) help preserve thermolabile PUFAs.
In contrast, green solvents like ethyl acetate and ethanol, particularly in mixtures with higher ethyl acetate content (a and b_2), preferentially extract neutral lipids such as triglycerides, which are typically richer in MUFAs. Ethyl acetate's lower polarity enhances solubilization of non-polar compounds, while ethanol contributes to intermediate polarity, allowing partial extraction of more polar lipids. However, the overall solvent system remains less effective at extracting highly unsaturated, polar lipids like DHA and EPA.
Additionally, MAE may enhance lipid release through rapid heating and cell disruption, but the short exposure time and solvent composition still favor the extraction of neutral lipids.
These observations suggest that aqueous and enzymatic methods are more suitable for PUFAs recovery, especially when targeting omega-3 fatty acids for nutraceutical applications, while green solvent-based methods may be more appropriate for MUFAs-rich oils.
In general, the comparative evaluation of Fatty Acid Methyl Ester (FAME) profiles revealed a largely similar lipid composition among the oils extracted using different techniques, as can be observed in Fig. 9 where the fatty acids have been grouped into macro-classes.
![]() | ||
| Fig. 9 Saturated, monounsaturated, and polyunsaturated FAMEs composition of oils extracted using different techniques. The Hara–Radin lipid extraction method was used as the reference method (ref).30 | ||
Total saturated fatty acids (SFA) reached their highest concentration in the sample extracted with S/L green solvents (a), accounting for 24.94% of the total lipid profile. Similarly, this extraction method yielded the highest proportion of MUFAs at 51.45%. In contrast, the highest PUFAs content was observed in the aqueous extract (c_3), with 32.87%, indicating a potentially more favorable composition for nutritional and functional applications.
The complexity and heterogeneity of the starting material used in this study pose challenges for establishing direct comparisons with previously published data. The lipids analyzed were extracted from a composite mixture of aquaculture side streams, specifically filleting by-products of both sea bream and sea bass, which include various tissue types and anatomical regions. This complexity contrasts with more defined matrices such as fish heads, livers, guts or skin.66
The fatty acids profiles obtained from these samples revealed SFA ranging from 21% to 25%, MUFA between 45% and 51%, and PUFA spanning 24% to 33%. These lipids were extracted using environmentally sustainable techniques, including MAE, EAE, and the use of green solvents. In contrast, literature data on sea bream and sea bass heads extracted via Soxhlet and microwave methods using hexane report SFA contents between 20% and 21%, MUFA between 41% and 45%, and PUFA between 35% and 38%.67 Although the SFA levels are broadly comparable, the MUFA content in the present samples is notably higher. This difference may reflect both the composition of the raw material and the influence of the extraction methodology. The use of green techniques appears to favor the recovery of MUFAs, suggesting a selective affinity or preservation effect associated with these methods. These findings highlight the relevance of matrix complexity and extraction strategy in determining the final fatty acid profile. Similar results in terms of SFA, MUFA, and PUFA composition have been reported by Korkmaz et al., who investigated oils extracted from rainbow trout by-products using EAE.68
Many studies focus on the fatty acid profiles of fish fillets, particularly for species such as sea bream and sea bass, which are widely consumed. These studies often emphasize the influence of dietary regimes and production systems, providing detailed comparisons between farmed and wild specimens.69–72 In contrast, data on lipid profiles from side streams remain relatively limited, underscoring the relevance of the present findings in expanding the scope of valorization strategies for aquaculture by-products.
In recent decades, the dietary ratio of omega-6/omega-3 in Western populations has shifted dramatically from an estimated 1
:
1 in ancestral diets to values exceeding 15
:
1.73 Such disproportionate intake has been associated with an increased prevalence of chronic inflammatory conditions, including cardiovascular disease, metabolic syndrome, and autoimmune disorders.74 Emerging evidence underscores the health-promoting potential of omega-3 PUFAs, particularly EPA and DHA, which exhibit anti-inflammatory, cardioprotective, and neurodevelopmental benefits.75 Consequently, optimizing the omega-6/omega-3 ratio through dietary interventions or supplementation is considered a key strategy in improving public health outcomes.
Studies suggest that an omega-6/omega-3 ratio below 4
:
1, and ideally around 2–3
:
1 is generally regarded as nutritionally advantageous, as they reflect a higher proportion of anti-inflammatory omega-3 fatty acids relative to pro-inflammatory omega-6 species.76,77 All the extraction methods yielded highly favorable lipid profile in terms of omega-6/omega-3 balance, suggesting their potential for producing fish oil with enhanced health-promoting properties.
| SFA | MUFA | PUFA | EPA | DHA | TOT_OMEGA_6 | TOT_OMEGA_3 | OMEGA_6/OMEGA_3 | Recovery | Acidity | TOTOX | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ref | 21.48 | 46.5 | 32.47 | 2.3 | 1.1 | 20.01 | 11.6 | 1.73 | 100 | 2.8 | 14.82 |
| a | 24.94 | 51.45 | 24.09 | 1.2 | 0.59 | 16.83 | 6.39 | 2.63 | 81.6 | 3.2 | 5.08 |
| b_1 | 23.46 | 48.19 | 28.74 | 1.7 | 0.85 | 19.19 | 8.85 | 2.17 | 82.7 | 3.4 | 4.77 |
| b_2 | 23.41 | 49.78 | 27.13 | 1.6 | 0.77 | 18.31 | 8.17 | 2.24 | 99.3 | 3.2 | 5.86 |
| c_1 | 23 | 49.01 | 28.4 | 1.8 | 0.88 | 18.28 | 9.18 | 1.99 | 77.4 | 3.3 | 6.68 |
| c_2 | 23.7 | 45.43 | 27.75 | 1.8 | 0.5 | 19.66 | 7.5 | 2.62 | 80.7 | 3.4 | 5.17 |
| c_3 | 21.06 | 46.45 | 32.87 | 2.3 | 1.1 | 19.67 | 11.6 | 1.70 | 83.6 | 3.4 | 2.29 |
Fig. 10 presents the PCA results performed on the autoscaled data matrix D7,11, highlighting the biplot (score and loading plots) of the first two principal components, which together explain 86.9% of the total variance.
The biplot (Fig. 10) and the analysis of the loading plots (Fig. 11) reveal that the first principal component is primarily associated with variables related to the fatty acid profile, while the second component is mainly influenced by variables concerning both the recovery and the quality of the lipid fraction (acidity and TOTOX).
Analysis of the PCA scores indicates that the reference method (ref) and the water-based extraction (c_3) are closely positioned along PC1, reflecting a comparable fatty acid profile, with slightly higher PUFA and ω-3 contents. In contrast, the conventional solid/liquid cold extraction using ethyl acetate:ethanol (3
:
1, v/v) (a_S/L) is clearly separated along PC1, showing higher SFA and MUFA levels and a concomitant reduction in PUFA content.
Green organic solvent-based extractions, including conventional and microwave-assisted methods, tend to preferentially solubilize neutral storage lipids, resulting in higher MUFA and SFA contents. Enzymatic-assisted extractions cluster with microwave-assisted methods, suggesting that enzymatic hydrolysis primarily enhances lipid release through matrix degradation rather than significantly altering lipid selectivity. This indicates that the extraction mechanism and solvent–matrix interactions, rather than the mere presence of water, are the main factors driving the observed differences in fatty acid profiles. Microwave-assisted extractions performed with ethyl acetate
:
ethanol at ratios of 2
:
1 (v/v) (b_1) and 3
:
1 (v/v) (b_2), together with enzymatic-assisted extractions (c_1 and c_2), display a similar trend along PC1, confirming their comparable fatty acid compositions. The enzymatic methods cluster closely and show a fatty acid profile resembling that of b_1, while offering the additional advantage of protein hydrolysate recovery, making them particularly attractive for process upscaling. Between c_1 and c_2, method c_2 was selected due to its higher extraction yield.
Although ref and c_3 exhibit similar behavior along PC1, they are clearly separated along PC2. This separation reflects differences in technological and quality-related parameters: c_3 shows lower recovery and TOTOX values but higher acidity, likely due to prolonged contact with the aqueous phase, which may promote hydrolytic reactions and increase free fatty acid formation.
Overall, PC1 is mainly associated with fatty acid composition (PUFA, MUFA, and SFA), while PC2 is driven by recovery and oxidative stability indicators (TOTOX and acidity). PCA therefore confirms that fatty acid composition accounts for most of the variance among extraction methods, while technological factors related to oil quality and process efficiency further contribute to sample discrimination. Nevertheless, differences in fatty acid composition among the various extraction methods are subtle but consistent. PCA highlights these subtle variations by projecting the autoscaled data (mean-centered and scaled to unit variance) into a reduced-dimensional space.
Regarding the quality of the extracted oil, preliminary analyses revealed good oxidative stability, as indicated by a TOTOX index of 15.2 ± 0.6. However, the acidity value (8.8 ± 0.9) was higher than those typically observed at laboratory scale. To address this issue, several strategies are currently under investigation, including the integration of an oil drying system following separation. This solution is planned to be implemented in the pilot-scale system currently being designed within the EcoeFISHent project. In an industrial setting, long incubation steps would usually be avoided, as the process progresses continuously, without the long incubation steps, such as the overnight storage performed in this pilot experiment. This could positively affect the oil quality and the economic sustainability of the process.
Within the Horizon2020 EcoeFISHent framework, efforts have been directed toward fostering a sustainable blue circular economy by developing innovative value chains for the extraction and application of bioactive and functional compounds from fishery side streams. A key innovation lies in the valorization of unsorted and non-separated residues, thus avoiding preliminary sorting, namely the separation of different by-products (e.g., skin, bones, tails…), which often proves economically unsustainable for small and medium-sized enterprises and is typically excluded from conventional processing workflows.
Side streams generated during the filleting of sea bream and sea bass were recovered in an unsorted form, milled, and dehydrated using a patented mild processing technique. This process yielded a concentrated biomass with high oil content (∼40%), minimal oxidative deterioration, and low residual moisture (1–3%), ensuring extended shelf life.
The upcycling of this biomass focused on crude oil extraction using three environmentally friendly methods at laboratory scale: green solvent extraction, microwave-assisted extraction (MAE), and enzyme-assisted extraction (EAE). All methods yielded satisfactory oil recovery (33–42%) and low oxidation levels. Comparative analysis of FAME profiles revealed consistent lipid composition across the different techniques, with all oils exhibiting a beneficial omega-6/omega-3 ratio, supporting their potential for nutraceutical applications.
Among the tested methods, EAE emerged as the most promising for industrial upscaling of fishery side-streams, offering a cost-effective and sustainable alternative to other advanced techniques like microwave-assisted extraction (MAE). Its operation under mild conditions, namely moderate temperature and neutral pH, significantly reduces energy consumption and simplifies equipment requirements. From an engineering standpoint, EAE is highly scalable, leveraging well-established aqueous enzymatic processes commonly used in industrial biotechnology. The use of eco-friendly solvents, such as water, further lowers environmental impact and operational costs. Additionally, the ability to recover valuable co-products like proteins and hydrolyzed peptides enhances the overall economic viability of the process. These combined benefits make EAE the ideal choice for large-scale extraction, aligning both environmental sustainability and industrial efficiency goals.
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