Open Access Article
Mohammed K.
Abd El-Gaber†
abc,
Ryan M.
Herrick†
a,
Pranaya
Sudhakar
d,
Ashutosh
Rana
e,
Brent A.
Roach
e,
Jeffrey E.
Dick
ef and
Ryan A.
Altman
*ae
aBorch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, IN 47907, USA. E-mail: raaltman@purdue.edu
bMedicinal Chemistry Department, Faculty of Pharmacy, Assiut University, Assiut 71526, Egypt
cDepartment of Pharmaceutical Sciences, University of Tennessee Health Science Center, Memphis, TN 38163, USA
dDepartment of Biology, Purdue University, West Lafayette, IN 47907, USA
eJames Tarpo Jr and Margaret Tarpo Department of Chemistry, Purdue University, West Lafayette, IN 47907, USA
fElmore Family School of Electrical and Computer Engineering, Purdue University, West Lafayette, IN 47907, USA
First published on 21st October 2025
Difluoromethylene-containing molecules and azoles, independently, have wide applications in materials science, pharmaceuticals, agrochemicals and as biological diagnostic probes. However, compounds bearing the N-α,α-difluoroalkyl azole [(azole)N–CF2R] motif remain scarce in academic and patent literature, presumably due to a lack of synthetic methods. Such compounds could be convergently accessed in a single step via the hydroazolation of gem-difluoroalkenes. However, most existing functionalization reactions of gem-difluoroalkenes proceed through a β-fluoride elimination pathway that generates monofluorinated derivatives. Herein, we report a photocatalytic hydroazolation of gem-difluoroalkenes to generate (azole)N–CF2R that employs an uncommon diselenide co-catalyst to avoid the defluorinative process, ultimately enabling facile access to underexplored medicinally and agriculturally-relevant chemical space.
The underutilization of the (azole)N–CF2R group can be partially attributed to the lack of viable synthetic methods to access this moiety. Existing methods for azole N-fluoroalkylation typically form N-fluoromethyl azoles16,17 or higher order N-perfluoroalkyl azoles (e.g., C2F4, C3F6)18,19 – few strategies exist for generating simple, hydrocarbon (azole)N–CF2R.20–22 To access this substructure, an attractive retrosynthetic disconnection across the N–CF2 bond might reveal gem-difluoroalkene (2)23–28 and azole (3) synthons, two readily accessible substrates (Scheme 1A). In the forward reaction, regioselective C–N bond formation would occur through attack of the azole at the electrophilic difluorinated carbon of 2.29,30 Indeed, azole nucleophiles do react with 3,3-difluoropropen-1-yl ammonium salt 4 to generate N-gem-difluoroallyl azoles (5) by an SN2′ process in the presence of stoichiometric NaH (Scheme 1B).31 However, the singular gem-difluoroalkene coupling partner prevents this reaction from serving as a convergent approach to generate a diverse array of (azole)N–CF2R.
In the absence of a quaternary ammonium leaving group, base-mediated nucleophilic addition of azoles to gem-difluoroalkenes proceeds through an unstable anionic intermediate 6 that readily loses a β-fluoride anion to form N-(α-fluorovinyl) azoles (7, Scheme 1B),29,32,33 not (azole)N–CF2R. Alternatively, single electron-mediated azolation of gem-difluoroalkenes represents a strategy that could circumvent the limitations of β-fluoride elimination and the necessity for specialized gem-difluoroalkene coupling partners (Scheme 1C). Specifically, the addition of azoles to diverse gem-difluoroalkenes under oxidative conditions generates a radical intermediate 8 that could be quenched by an appropriate radical source, thus avoiding anionic intermediate 6 and fluoride elimination.29 Such reactions of gem-difluoroalkenes have been accomplished using photocatalysts and electrolytic cells as single-electron oxidants to promote difunctionalization reactions that add azoles with O2,34,35 fluoride,36,37 alcohols, and an additional azole molecule (Scheme 1C).38 However, a simple hydrofunctionalization of gem-difluoroalkenes with azoles to form (azole)N–CF2R remains elusive.
To address this synthetic deficiency, we herein disclose a diselenide-mediated photocatalytic hydroazolation of gem-difluoroalkenes with both monocyclic and benzannulated azoles that delivers previously unreported (azole)N–CF2R. In this reaction, the diselenide co-catalyst promotes the desired hydrofunctionalization process and avoids undesired reactivity with gem-difluoroalkenes, similarly to a hydroalkoxylation reaction of gem-difluoroalkenes previously reported by our group.44 However, amongst a series of tested dichalcogenide co-catalysts, (PhSe)2 uniquely reversed selectivity for defluorinative azolation. Additionally, experimental data supports a mechanism initiated by direct photocatalyst oxidation of gem-difluoroalkenes, which contrasts the previous report.44
By merging two commonly exploited substructures found in biologically active compounds (azoles and fluoroalkyl groups), this approach opens numerous possibilities for expanding the synthetically accessible chemical space that could impact the development of therapeutics, biological probes, agrochemical agents, and materials.
| Entry | Photocatalyst | E 1/2 [PC*n/PCn−1] (V vs. Fc/Fc+)b | Additive | % Conv. 10a | % Yield 11aa | %Yield 12 | % Yield 13 |
|---|---|---|---|---|---|---|---|
| a Reaction conditions: gem-difluorostyrene 10a (50 μmol), benzimidazole (1.2 equiv.), additive, and photocatalyst (5 mol%) in DCE (0.25 mL) irradiated with a 40 W 427 nm LED under an atmosphere of N2. Conversion and yields were determined by 19F NMR using (trifluoromethyl)benzene as an internal standard. b Literature-reported reduction potentials were corrected to the Fc/Fc+ redox couple.43 c TRIP-SH = 2,4,6-triisopropylbenzenethiol, NHP = N-hydroxyphthalimide. d N.D. = not detected. | |||||||
| 1 | [Ir(dtbbpy)(ppy)2]PF6 | +0.28 (ref. 39) | None | <5 | 0 | 0 | N.D.d |
| 2 | Rose Bengal lactone | +0.28 (ref. 40) | None | <5 | 0 | 0 | N.D.d |
| 3 | Eosin Y (dibasic) | +0.45 (ref. 40) | None | <5 | 0 | 0 | N.D.d |
| 4 | 4CzIPN | +1.00 (ref. 40) | None | 67 | <1 | 66 | N.D.d |
| 5 | PC-I | +1.30 (ref. 41) | None | 69 | 5 | 64 | N.D.d |
| 6 | PC-II | +1.70 (ref. 42) | None | 66 | <1 | 64 | N.D.d |
| 7 | PC-I | +1.30 (ref. 41) | m-Anisidine (10%) | 61 | 3 | 56 | 0 |
| 8 | PC-I | +1.30 (ref. 41) | TRIP-SH (30%)c | 53 | 3 | 44 | 0 |
| 9 | PC-I | +1.30 (ref. 41) | NHP (50%)c | 72 | <1 | 66 | 0 |
| 10 | PC-I | +1.30 (ref. 41) | (TMS)3SiH (50%) | 70 | 8 | 56 | 0 |
| 11 | PC-I | +1.30 (ref. 41) | (PhS)2 (20%) | >99 | 26 | 42 | 17 (X = SPh) |
| 12 | PC-I | +1.30 (ref. 41) | (BnS)2 (20%) | 81 | 4 | 68 | 0 |
| 13 | PC-I | +1.30 (ref. 41) | (BnSe)2 (20%) | 82 | 21 | 44 | <1 (X = F) |
| 14 | PC-I | +1.30 (ref. 41) | (PhSe)2 (20%) | >99 | 81 | 4 | 2 (X = F) |
| 15 | PC-I | +1.30 (ref. 41) | (PhSe)2 (5%) | >99 | 93 | 0 | 0 |
A range of azoles successfully reacted with gem-difluorostyrene 10a using the optimized PC-I conditions (Table 2). Specifically, unsubstituted benzimidazole reacted to afford product 11aa in 87% yield. 5-Monosubstituted benzimidazoles bearing electron-withdrawing –Cl, –Br, –CO2Me, and –NO2 groups reacted with moderate to excellent yield (11ab–ae, 40–91%). A mixture of N-regioisomers was generated, but the 6-substituted products predominated, for which the major regioisomer was assigned by a combination of X-ray crystallography (see Data availability on p. 8) and 1H{19F} Nuclear Overhauser Effect (NOE) NMR. Other benzannulated azoles, such as indazoles (11af and 11ag, 92% and 61%) and benzotriazole (11ah, 96%) reacted with good yield and near exclusive regioselectivities. Notably, the high N2-regioselectivity for indazoles 11af and 11ag supports a process involving nucleophilic C–N bond formation from a neutral indazole molecule.50 Additionally, the FDA-approved drugs theophylline and triclabendazole were reacted with these conditions (11ai and 11aj, 43% and 86%). 7-Azaindoles also coupled successfully with slight alterations to the standard conditions, albeit in low yields and with long reaction times (11ak and 11al, 13% and 20%, 46 h and 44 h). Interestingly, these reactions exhibit exclusive N-regioselectivity for functionalization at the pyridyl nitrogen rather than the indole nitrogen, which is consistent with the observed inability of indoles to react in this system. However, 6-, 5-, and 4-azaindoles do not achieve net hydrofunctionalization and instead form monofluorovinyl azaindole products (ArCH = CFN(azaindole), 7).
| a Reaction conditions unless otherwise noted: gem-difluorostyrene 10a (0.50 mmol), azole (1.2 equiv.), 1,2-diphenyldiselane (5 mol%), and PC-I: {Ir[dF(CF3)ppy]2-(5,5′-dCF3bpy)}PF6 (5 mol%) in DCE (2.0 mL) irradiated with a 40 W 427 nm LED under an atmosphere of N2. Isolated yields represent an average of two independent reactions. Ratios in parentheses represent the major and minor N-regioisomeric ratio of the crude reaction mixture as determined by 19F NMR. b Structure of the major product was assigned by X-ray crystallography (see Data availability on p. 8). c Structure of the major product was assigned by 1H{19F} NOE. d Reaction contained N2-sparged H2O (0.50 equiv.). e With 7-azaindole (1.5 equiv.), 1,2-diphenyldiselane (15 mol%), and PC-I: {Ir[dF(CF3)ppy]2-(5,5′-dCF3bpy)}PF6 (1 mol%) for 46 h. f With 1,2-diphenyldiselane (25 mol%) and PC-II: 9-mesityl-3,6-di-tert-butyl-10-phenylacridinium tetrafluoroborate (3 mol%) in PhMe (2.0 mL) for 44 h. |
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Reactions of monocyclic pyrazoles bearing electron-withdrawing groups (4-Br and 4-CO2Et, 11am and 11ao, 88% and 89% [H2O required for 11ao, see Notes section]), electron-donating groups (3,5-Me and 4-BPin, 11ap and 11ar, 91% and 88%), and sterically restrictive 3,5-disubstitution (11ap and 11aq, 91% and 87%) all furnished products in excellent yields. Importantly, the reaction's ability to tolerate bromide (11am, 88%), iodide (11an, 74% [H2O required, see Notes section]), and boronate ester (11ar, 88%) substituents enables further divergent functionalization by cross-coupling reactions. 4,5-Dichloro-1H-imidazole was successfully coupled (11as, 91%), and 1,2,3-1H-triazole reacted with excellent yield and exclusive N1–regioselectivity (11at, 90%). While the reaction demonstrated a broad scope of azole coupling partners, some poor-performing and unreactive substrates were identified (Table S5).
Using pyrazole as a model substrate, a wide range of gem-difluoroalkenes coupled in moderate to excellent yields under either PC-I or PC-II catalysis (11a–r, 24–88%, Table 3). To select the appropriate photocatalyst for the reaction of each gem-difluoroalkene, conditions derived for PC-I and PC-II were preemptively screened on a 50 μmol scale (Table S6) and successful reactions were repeated on a 0.50 mmol scale. The reaction tolerated a range of heterocyclic gem-difluorostyrenes (11b–f, 41–86%), including pyrazoles, benzothiophenes, benzofurans, indoles, and pyrroles. Additionally, though a rarely reported glucose-derived difluorinated enol substrate (10g) reacted sluggishly with pyrazole (5 days to achieve ∼50% yield on a 50 μmol scale), indazole successfully coupled with saccharide 10g to generate a single diastereomer at C2 (11g, 44%, determined by X-ray crystallography, see Data availability on p. 8). Surprisingly, the N1-substituted indazole regioisomer predominated in this reaction (13
:
1 N1
:
N2, determined by 19F NMR and X-ray crystallography, see Data availability on p.8), which contrasts the coupling reactions of indazoles with gem-difluorostyrene 10a (11af and 11ag, Table 2) and gem-difluorostyrenes 10c, 10e, 10f, and 10j (Table S5) that display almost exclusive substitution at N2. Electronically neutral and rich gem-difluorostyrenes afforded moderate to high yields of N-α,α-difluoroalkyl pyrazoles (11a, 11j–p, 57–88%). However, gem-difluorostyrenes with electron-withdrawing substituents reacted in lower yields and with slower conversion (11q and 11r, 24% and 25%, 42 and 48 h). Notably, these substrates required the more strongly oxidizing acridinium-based photocatalyst (PC-II conditions) to generate detectable yields of the desired (azole)N–CF2R products, a correlation that was not apparent for electronically neutral and rich substrates. Interestingly, neither gem-difluorostyrenes bearing strongly electron-withdrawing substituents (e.g., 4-CN) nor aliphatic gem-difluoroalkenes reacted with azoles employing either PC-I or PC-II conditions (Table S6), which, supplemented by luminescence quenching studies and a comparison of substrate and photocatalyst redox potentials (see mechanistic discussion below), suggests that only gem-difluoroalkene substrates that can be oxidized by PC-I and PC-II will successfully react. Regardless, this limitation in substrate scope contrasts a previously reported hydroalkoxylation method that utilizes a similar co-catalytic system.44 Sterically hindered tetra-vinyl- and mono-ortho-substituted gem-difluorostyrene substrates reacted successfully (11h and 11o, 79 and 61%); however, a 2,6-dimethyl gem-difluorostyrene could not be coupled (Table S6). Notably, the reaction was successful on a gram scale, albeit with modification to the photochemical reactor (see SI, S30) and worsened conversion efficiency (11n, 70% on 4.6 mmol scale vs. 87% on 0.5 mmol scale).
| a Reaction conditions: gem-difluorostyrene 10a–r (0.50 mmol), azole (1.2 equiv.), 1,2-diphenyldiselane (5 mol%), and either PC-I: {Ir[dF(CF3)ppy]2-(5,5′-dCF3bpy)}PF6 (5 mol%) in DCE (2.0 mL) or PC-II: 9-mesityl-3,6-di-tert-butyl-10-phenylacridinium tetrafluoroborate (3 mol%) in PhMe (2.0 mL) irradiated with a 40 W 427 nm LED under an atmosphere of N2. Isolated yields represent an average of two independent reactions. b 15 mol% 1,2-diphenyldiselane was used. c Ratio represents the major and minor N-regioisomeric ratio of the crude reaction mixture as determined by 19F NMR. Structure of the major product was assigned by X-ray crystallography (see Data availability on p. 8). d Data in parentheses: gem-difluorostyrene 10n (4.6 mmol, 1.0 g), pyrazole (1.2 equiv.), 1,2-diphenyldiselane (5 mol%), and PC-II (3 mol%) in PhMe (18.5 mL) irradiated with a 40 W 427 nm LED under an atmosphere of argon. Isolated yield represents an average of two independent reactions. |
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A combination of physicochemical data and literature precedent for photocatalyzed functionalization reactions of both nonfluorinated and gem-difluorinated alkenes supports a mechanism involving oxidation of gem-difluorostyrene 10 by excited state PC* to form radical cation 10˙+,35–37,51,52 nucleophilic attack by azole 14 to afford acidic radical cation 15, deprotonation to generate carbon-centered radical 16 and selenol 19,44,53,54 and subsequent hydrogen atom transfer to form (azole)N–CF2R 11 (Scheme 2A). Several routine experiments suggest a radical process. In support of the existence of radical 16, both PC-I and PC-II-catalyzed reactions of tetrasubstituted gem-difluorostyrene 10s produced cyclopropane ring opening product 11s (Scheme 2B). Notably, an azole-functionalized product bearing an intact cyclopropane ring was not observed. Additionally, light on/off experiments support a mechanism involving quenching of product-forming radical intermediates upon completion of a photocatalytic cycle, as reaction progression was not detected during dark periods (Scheme 2C).
Alternatively, both the formation of intermediate 16 and a lack of reaction progression in the dark are also consistent with a mechanism involving attack of an azole-based radical into the neutral gem-difluoroalkene (Scheme S2). This alternative hypothesis is supported by (a) photophysical data that suggests oxidation of azoles is possible in this system: pyrazole, indazole, and benzimidazole quench the fluorescence of PC-II (but not PC-I) with comparable rate constants to gem-difluorostyrenes (see SI S33–42), and (b) measured oxidation potentials of these azoles (pyrazole: Ep = +1.6 V; indazole: Ep = +1.2 V; benzimidazole: Ep = +1.1 V) that are similar to the excited state reduction potentials of PC-I [E1/2(PC-I*III/PC-III) = +1.30 V]41 and PC-II [E1/2(PC-II*+/PC-II˙) = +1.70 V].42 However, though several radical traps did capture azoles using PC-II conditions, radical traps did not capture azole radicals using PC-I conditions, and for both catalyst systems, radical traps failed to inhibit the photocatalytic reactions (Table S7). All combined, this data suggests that azole radicals might form under the conditions, but that the reactions do not proceed by addition of azole radicals to gem-difluoroalkenes.
Notably, in this process, PhSe-containing intermediates facilitate a polar/radical crossover event by acting as (1) an oxidant to turn over ground-state photocatalyst (17 → 18), (2) a Brønsted base (18 → 19), and (3) a hydrogen atom source (19 → 17), respectively, as supported by a variety of physicochemical measurements. Specifically, blue light initiates the homolytic fragmentation of (PhSe)2 to form selenyl radical 17,55,56 which serves as an oxidant for reduced-state photocatalysts PC-I [E1/2(PC-IIII/PC-III) = −1.07 V]41 or PC-II [E1/2(PC-II+/PC-II˙) = −0.97 V]42 to regenerate ground-state photocatalysts PC-I/II and form selenolate 18. (PhSe)2 does not directly oxidize the reduced-state photocatalysts given its low measured reduction potential (Ep = −1.8 V). Subsequently, selenolate 18 (pKa = 4.60 in H2O)57 sequesters the proton from radical cation 15 to generate carbon-centered radical 16 and selenol 19. Finally, hydrogen atom abstraction from selenol 19 [BDE = 78 ± 4 kcal mol−1 (H–SePh)]58 by radical 16 [BDE = ∼85–96 kcal mol−1 (H–C)]59 affords (azole)N–CF2R product 11 and regenerates selenyl radical 17. Interestingly, multiple radical traps did not inhibit the reaction (Table S7), which could indicate that the sequence of 15 + 18 → 16 + 19 → 17 + 11 occurs rapidly within the solvent cage.
In contrast to a prior proposal suggesting that the diselenide mediates oxidation of the gem-difluorinated alkene (see further discussion in SI S49–51),44 experimental data supports an initiation step involving direct photocatalyst oxidation of gem-difluorostyrenes 10 (Table 4). More specifically, reactions proceed when the oxidation potential of a gem-difluorostyrene (Ep) is lower than the excited-state reduction potential of a photocatalyst (E1/2) and typically require the gem-difluorostyrene to quench the luminescence of the tested photocatalyst. For example, electron-rich gem-difluorostyrenes 10a (Ep = +1.0 V) and 10k (Ep = +1.0 V) quench the luminescence of both PC-I* [E1/2(PC-I*III/PC-III) = +1.30 V]41 and PC-II* [E1/2(PC-II*+/PC-II˙) = +1.70 V],42 and these reactions all generate products (entries 1–4). Furthermore, gem-difluorostyrene 10r (Ep = +1.5 V) only quenches the luminescence of PC-II* and thus only couples with pyrazole when reacted with PC-II (entries 7 and 8). Finally, gem-difluorostyrene 10t (Ep = +1.8 V) does not quench the luminescence of either PC-I* or PC-II* and does not react with any of the tested azoles (entries 9 and 10).
| Entry | Substratea | Photocatalyst | Luminescence quenchinga (M−1 s−1) | % Yieldb | % Conv. (time)b |
|---|---|---|---|---|---|
| a Experimental procedures and data for cyclic voltammetry and luminescence quenching studies can be found in the supporting information document (S31–44). Ep = anodic peak potential [vs. E1/2(Fc/Fc+)]; kq = bimolecular quenching rate constant. b Reaction conditions: gem-difluorostyrene (50 μmol), pyrazole (1.2 equiv.), 1,2-diphenyldiselane (5 mol%), and either PC-I: {Ir[dF(CF3)ppy]2-(5,5′-dCF3bpy)}PF6 (5 mol%) in DCE (200 μL) or PC-II: 9-mesityl-3,6-di-tert-butyl-10-phenylacridinium tetrafluoroborate (3 mol%) in PhMe (200 μL) irradiated with a 40 W 427 nm LED under an atmosphere of N2 at 30 °C. Conversion and yields were determined by 19F NMR using (trifluoromethyl)benzene as an internal standard. | |||||
| 1 |
|
PC-I | k q = 7.3 × 108 | 92 | >99 (14 h) |
| 2 | 10a (Ep = +1.0 V) | PC-II | k q = 8.3 × 109 | 31 | 35 (14 h) |
| 3 |
|
PC-I | k q = 1.2 × 109 | 70 | >99 (14.5 h) |
| 4 | 10k (Ep = +1.0 V) | PC-II | k q = 1.6 × 1010 | 94 | >99 (14.5 h) |
| 5 |
|
PC-I | no quenching observed | 93 | >99 (15.5 h) |
| 6 | 10n (Ep = +1.3 V) | PC-II | k q = 8.3 × 109 | 83 | >99 (15.5 h) |
| 7 |
|
PC-I | No quenching observed | 0 | 0 (12.5 h) |
| 8 | 10r (Ep = +1.5 V) | PC-II | k q = 4.9 × 108 | 26 | 46 (12.5 h) |
| 9 |
|
PC-I | No quenching observed | 0 | 6 (14.5 h) |
| 10 | 10t (Ep = +1.8 V) | PC-II | No quenching observed | 0 | 18 (14.5 h) |
However, in contrast to this general correlation between luminescence of photocatalyst quenching and gem-difluorostyrene conversion, gem-difluorostyrenes 10n (Ep = +1.3 V) and 10o only quench the luminescence of PC-II* despite reacting successfully under both PC-I and PC-II catalysis (entries 5 and 6). In these reactions, only (PhSe)2 quenched PC-I* luminescence, though evidence for [(PhSe)2]•+–mediated gem-difluorostyrene oxidation was not found (see SI, S49–51). Therefore, for certain substrates, a plausible alternate mechanistic hypothesis for PC-I might involve an oxidative quenching cycle (Scheme S4) as opposed to a reductive quenching cycle (Scheme 2A). Specifically, PC-I* [E1/2(PC-I*III/PC-IIV) = −0.81 V]60 might first reduce selenyl radical 17, thus generating strong oxidant PC-IIV [Ep(PC-IIII/PC-IIV) = +1.56 V]60 which oxidizes gem-difluorostyrenes 10n and 10o.
CFN(azole)] and vinyl gem-diazole [ArCH
C{N(azole)}2]. The specific yield-enhancing role of H2O in these reactions is presently unclear and failed to extend to other poor-performing reactions (11ab, 11ag, and 11ai).
The data supporting this article have been included as part of the supplementary information (SI). Supplementary information: experimental procedures and characterization data for the synthesized compounds as well as mechanistic experiments. See DOI: https://doi.org/10.1039/d5sc04074d.
Footnote |
| † These authors contributed equally to this work. |
| This journal is © The Royal Society of Chemistry 2025 |