Open Access Article
Xiu
Huang
ab,
Li
Huang
a,
Qian
Wang
a,
Qiurong
He
a,
Zunzhen
Zhang
a,
Qian
Liu
*bc and
Guibin
Jiang
bc
aWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu 610041, China
bState Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China. E-mail: qianliu@rcees.ac.cn
cCollege of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China
First published on 30th June 2025
The coronavirus pandemic (COVID-19) has led to a dramatic increase in the usage and disposal of disposable masks worldwide, most of which are manufactured from melt-blown fabric composed of polypropylene (PP). Biodegradation of PP is considered to be extremely challenging because of its saturated chemical structure and high stability. In this study, we discovered that PP-based melt-blown fabric debris (MBFD; Mw, ∼157 kDa; crystallinity, 40–60%) and PP industrial particles (Mw, 100 kDa; crystallinity, 40–50%) can be degraded by the natural metabolizing enzyme glutathione S-transferase (GST) and digestive enzyme trypsin. The degradation efficiency of MBFD reached 86.7% (trypsin) and 99.2% (GST) with degradation rates of 1.57 and 3.98 g L−1 h−1, respectively, under physiological conditions at 1 atm. Chemical multi-fingerprinting analysis revealed that the mechanisms of MBFD degradation included oxidation and unreported nitridation pathways. Molecular dynamics simulations demonstrated the stability of the enzyme–PP complex system, primarily attributed to hydrophobic interactions. This enzymatic method was also successfully applied to degrade MBFD from disposable activated carbon masks, PP industrial particles, and polyethylene (PE) industrial particles. Finally, we demonstrated the potential of this enzymatic method in biodegradation of MBFD and PP industrial particles in real environmental wastewaters and human serum.
The treatment of melt-blown fabrics, the main material in disposable masks, is crucial for reducing the environmental and health risks associated with masks.19 Melt-blown fabrics provide comfort during extended wear due to their lightweight and breathable nature.20 Polypropylene (PP) is the most commonly used material in making protective masks and is extensively used in producing melt-blown fabrics.21 The structural design of PP melt-blown fabrics enhances breathability by optimizing air circulation and moisture release.21 Current treatment methods for melt-blown fabrics include photodegradation, thermal degradation, mechanical degradation, and chemical degradation (including hydrolysis and oxidative degradation).22,23 However, these methods often have low efficiency and limited treatment capacity, potentially leading to secondary pollution risks. In particular, PP materials have significant environmental concerns because they are non-biodegradable.24 Specifically, under various degradation conditions, such as aerobic or anaerobic environments, photo-oxidation, and thermal oxidation, it can take over 10 years for PP-based melt-blown fabrics to fully degrade.25 Consequently, there is an urgent need to develop effective and eco-friendly biodegradation technologies for degrading melt-blown fabrics.
Our previous study unexpectedly discovered that PET plastic can be efficiently degraded by glutathione S-transferase (GST), a natural phase II metabolic isozyme of mammalian origin, under mild conditions.26 This finding highlights the potential of natural enzymes in degrading PET plastic. PET plastic is a thermoplastic polyester composed of monomers terephthalic acid (TPA) and ethylene glycol (EG) with oxidizable and hydrolyzable groups (–COO– and –CO–). Ester bonds in the polymer backbone of PET are more susceptible to biodegradation compared to C–C bonds.27 Chemical depolymerization of PET can be achieved through various reactions like hydrolysis, glycolysis, methanolysis, aminolysis, and ammonolysis.28 PP is much more resistant to stress cracking than PET, due to the fact that PP has too high molecular weight, too much hydrophobicity, too much bonding energy, and too little bioaccessibility, making it difficult to be degraded by biological enzymes in the environment.29 Specifically, (1) the stable chemical structure of PP, mainly consisting of –C–C– and –C–H– covalent bonds, lacks groups prone to oxidation and hydrolysis. Additionally, the absence of enzymes capable of directly breaking the C–C bond in nature impedes their biodegradation; (2) the long-chain structure with a high molecular weight (10
000–40
000 g mol−1) creates spatial site resistance, preventing biological enzymes from accessing active sites for degradation;30,31 (3) PP, being highly hydrophobic and composed of three stereoisomers (isotactic, syndiotactic, and atactic), exhibits a hydrophobic surface that enhances its environmental resistance.32,33 This hydrophobicity makes it challenging for enzymes to interact with it for degradation. Therefore, there are very few reports on the biodegradation of PP plastics. Efficient and highly specific degradation enzymes have not been reported, and the mechanism of degradation remains largely unknown.34 To the best of our knowledge, there have been no reports on the degradation of PP by natural enzymes, particularly those of mammalian and human origin, which play a crucial role in metabolic transformations in living organisms.
In this study, we tested the feasibility of biodegradation of PP-based melt-blown fabric debris (MBFD) with several typical natural enzymes. Three enzymes—glutathione S-transferase (GST), cytochrome P450 (CYP450), and trypsin—were selected for the biodegradation of MBFD due to their critical roles in biochemical reactions within living organisms, particularly in drug metabolism and conversion of bioactive substances.35–37 Among them, CYP450 and GST are among the most important and representative biometabolic enzymes, making them ideal candidates for studying MBFD degradation in biological systems.35,36 Trypsin, as a key digestive enzyme, serves as the first line of defense following MBFD ingestion, making its role crucial in assessing the fate of MBFD in organisms and subsequent degradation.38 The low cost and ease of production of trypsin also enhance its potential for large-scale industrial applications. Furthermore, previous studies have shown that GST, trypsin, and CYP450 can degrade high-molecular weight polymers, suggesting their potential in breaking down PP-based MBFD as well.26,39–42 We found that GST and trypsin can efficiently degrade MBFD under mild conditions. In contrast, CYP450 showed low efficiency in degradation of MBFD. Small molecule inhibitors and an organic solvent (acetonitrile, ACN) were used to verify the role of enzymes. Multiple characterization techniques, such as scanning electron microscopy (SEM), X-ray photoelectron spectroscopy (XPS), energy-dispersive X-ray spectroscopy (EDX), and laser desorption/ionization time-of-flight mass spectrometry (LDI-TOF MS) were used to further explore the degradation pathways and mechanisms. We also employed molecular docking and molecular dynamics simulations to investigate the molecular interaction between PP and enzymes. Finally, we applied the enzymatic method in the biodegradation of MBFD in real environmental wastewaters, demonstrating the practical applicability of our findings.
We first characterized the morphology and size of MBFD co-incubated with trypsin. The pristine MBFD after ball milling exhibited a morphology consisting of flakes and strips, with lengths and widths less than 10 μm and 1.2 μm, respectively (Fig. 1A). Upon degradation in the dark, MBFD transformed from fibrous structures to granular materials, with pores of varying sizes appearing at the edges and within the material (Fig. 1A). This result indicated that the degradation occurred simultaneously at both the edges and the interior of the MBFD. After 14 days of incubation with trypsin, the size of the MBFD was significantly reduced to the nanometer level, with degradation products observed at lengths as small as 30 nm (Fig. 1A).
GST, an important natural metabolic enzyme, was also evaluated. The results obtained with GST were similar to those with trypsin, suggesting that MBFD can also be degraded by GST under mild conditions. As illustrated in Fig. 1B, co-incubation with GST resulted in a granule-like morphology of MBFD. After 14 days of incubation with GST, MBFD was reduced to smaller particles ranging from 16 nm to 500 nm in size (Fig. 1B). SEM images visualized the dynamic process of MBFD degradation over time. As illustrated in Fig. 1C, the enzyme appeared to wrap around the MBFD, gradually breaking it down into smaller particles. After incubation for 14 days in the dark, small particles were observed surrounding the larger ones, indicating the release of degraded materials (Fig. 1B). After just 4 days of incubation, the size distribution of MBFD particles ranged from 6 nm to 750 nm (Fig. 1C). Furthermore, the DLS analysis in Fig. S1† confirms the decreasing trend in particle size variation, transitioning from the micrometer to the nanometer scale. This aligns with the data presented on particle frequency. The use of enzymes from mammals or humans, including metabolic and digestive enzymes, suggests that plastics may be transformed within organisms and humans.26,29,43,44 This transformation can convert plastics into micro/nanoplastics, leading to significant environmental pollution and health risks.45 In human tissues, micro/nanoplastics can cause health issues like inflammatory responses, endocrine disruption, and cell damage.45 It is widely believed that smaller particles can more easily penetrate the human body, causing potential systemic harm.46 At the same time, the degradation of plastics by enzymes is directly linked to their size; generally, smaller particles are easier to degrade.26,47 More research is required to understand how plastics are metabolized and processed in the human body. Specifically, further studies are needed to investigate the degradation process of plastics in living organisms and the human body, focusing on the biotransformation reactions and fate of the resulting degradation products.
Experiments using small-molecule inhibitors and the organic solvent ACN provided compelling evidence for the roles of trypsin and GST in the degradation of MBFD (Fig. 1D, G, J, and S2†). Fig. 1D shows the morphology and size distribution of MBFD in the presence of small-molecule inhibitors and ACN. In the presence of two small-molecule inhibitors (TLK117 and indomethacin), the size of MBFD increased, suggesting aggregation rather than degradation. Further analysis (Fig. 1G and J) shows that in the presence of enzyme inhibitors and ACN, the degradation efficiency of MBFD by trypsin and GST significantly dropped from 80.9% to 0% (TLCK, trypsin inhibitor soybean and ACN) and 85.4% to 0% (TLK117, indomethacin, and ACN). These results strongly support that the degradation of MBFD is enzymatic in nature, as the inhibition of enzyme activity led to a complete cessation of degradation.
Fig. 1E–J show the degradation efficiency and kinetic curves of MBFD, revealing that the degradation follows the first-order kinetics (Fig. 1E–J and Table S1†). When co-incubated with trypsin (Fig. 1E–G) or GST (Fig. 1H–J), MBFD was nearly fully degraded, with the MBFD-to-trypsin ratio ranging from 30.4 to 89.0 kg mg−1 and the MBFD-to-GST ratio ranging from 2.2 to 11.6 kg mg−1. Under the specified incubation time and environmental conditions, the degradation efficiency of MBFD was measured as 80.9% with trypsin (Fig. 1G), which was slightly lower than 85.4% obtained with GST (Fig. 1J). The dynamic degradation curve shows that the degradation rate of MBFD declined over time, eventually reaching a plateau. The maximum degradation rate achieved was 1.57 g L−1 h−1 for trypsin and 3.98 g L−1 h−1 for GST (Table S1†).
We also investigated the potential of CYP450 in MBFD degradation because it is a significant group of hydroxyl-detoxifying enzymes mostly expressed in the liver for phase I metabolic processes. However, the degradation efficiency of MBFD by CYP450 was found to be low at only 0.9% (Fig. S3†). This low efficiency can be attributed to the fact that most CYP450s need NAD(P)H-driven redox partners to function in vivo.39,48 Alternatively, H2O2 or organic surrogates, such as tert-butyl peroxide, cumene hydroperoxide, or iodosylbenzene, can also be used to drive CYP450 catalysis by acting as an oxygen donor to the CYP450 heme and produce catalytically active ferric hydroperoxy species.49,50 Therefore, subsequent experiments focused on GST and trypsin.
O or –OH).54–60 Notably, GST plays a pivotal role in managing photo-oxidative stress, serving as a crucial component in exogenous metabolism, oxidative stress response, and cellular signaling pathways.54–60 These biological functions are intrinsically linked to the generation and elimination of reactive oxygen species (ROS), whose production is directly influenced by light exposure, leading to differential enzyme activity in illuminated versus dark environments. The observed increase in GST activity represents an adaptive response to light-induced ROS generation. Furthermore, GST's function as a transducer in UV and red light-regulated signaling pathways suggests that light exposure enhances both its conjugation capacity and catalytic efficiency. This dual mechanism of action – through both ROS- mediated pathways and direct light activation – provides a comprehensive explanation for the enhanced biodegradation observed under illuminated conditions.57
Fig. 1F, G, I and J show that both trypsin and GST effectively induced the degradation of MBFD under both dark or light conditions, indicating that the complex matrix of wastewater did no significantly hinder the enzymatic process. We also compared the degradation of MBFD induced by trypsin and GST in wastewater and pure water (Fig. 1). The morphology of MBFD in wastewater was similar with that in pure water (Fig. 1A–D), with both environments showing a transition from irregular to more regular shapes and a decrease in particle size. In wastewater, the particle size of MBFD decreased to a range of 1.2164 nm (Fig. S4†). Remarkably, the degradation efficiency of MBFD in wastewater samples exceeded 99% (Fig. 1G and J), even higher than that in pure water. This result was attributed to the increase of enzyme activity in the wastewater environment, with trypsin activity increasing by ∼3% and GST by ∼11% (Fig. S2†). Furthermore, under light irradiation, the degradation efficiency of MBFD in wastewater was significantly higher than that under dark conditions (Fig. 1A, B and S2†). These findings highlight the potential of natural enzymes to effectively degrade PP plastics in real wastewater samples, presenting a potential eco-friendly strategy for mitigating plastic pollution in wastewater management. To enhance the efficiency and scale of plastic degradation for industrial use, a combination of genetic engineering and microbial technologies can be explored. Additionally, further research is needed to assess the biodegradation of PP in various environmental settings, like soil, and with different types of plastics to better address plastic pollution challenges.
XPS analysis further elucidated the elemental fingerprints of MBFD during the degradation process. The pristine MBFD showed an absorption peak at 285.0 eV, corresponding to –C–H– and –C–C– bonds of hydrocarbons (Fig. 2G). Upon mixing MBFD with GST and trypsin, new peaks emerged at 285.8 eV and 287.8 eV, indicating the formation of –C–N– or –C–O– bonds and –C
O– or C
N– bonds, respectively (Fig. 2H–K). Notably, the intensity of these peaks increased significantly over time. Additionally, FT-IR spectra revealed the appearance of stretching vibration peaks of –C–O–, –C
O–, and –C
N– bonds (see Fig. 2L–M). Incubation with GST generated –H–N–H– asymmetric and symmetric stretching vibration peaks at 2850 cm−1 and 2918 cm−1, alongside stretching vibration peaks for –C
C– and –C
O– at 1542 cm−1 and 1656 cm−1, respectively (Fig. 2L–M). In the case of trypsin-induced degradation, several peaks were observed, including those at 2850 and 2918 cm−1 (asymmetric and symmetric stretching vibrations of –H–N–H–), as well as peaks at 1630 cm−1 (stretching vibration of –C
O–), 1079 cm−1 (bending vibration of –N–H–), 1030 cm−1 (stretching vibration of –C–O–C–), 2180 cm−1 (stretching vibration of –C
N–), and 2031 cm−1 (stretching vibration of –O
C
N–) (Fig. 2L–M).
This method allowed us to obtain MS fingerprints of MBFD degradation and monitor the degradation process. A series of characteristic peaks of MBFD were generated in both the low-mass and high-mass regions (Fig. S5 and S6†). Extending the incubation time to 14 days, the characteristic peaks of MBFD maintained consistent intensities in the presence of the inhibitor (Fig. S6–S8†), confirming that the degradation was indeed triggered by trypsin and GST. When incubated with trypsin, a gradual shift of peaks to the low-mass region was observed over 2 days, implying a gradual decrease in the size of MBFD induced by trypsin (Fig. S5 and S9A†). As degradation continued, MBFD was broken down into monomers, small organic molecules, or even CO2, leading to a gradual decrease and eventually disappearance of the characteristic MBFD peaks (Fig. S5 and S9A†). During this process, a variety of oxidation products formed, including single-oxygen products (e.g., C3H6O at m/z 58.0) and multi-oxygen products (e.g., C6H12O2 at m/z 116.1 and [C5H10O3]− at m/z 118.1). When trypsin degrades MBFD, it formed amides (e.g., [C7H15NO + Na–2H]− at m/z 150.1 and [C7H16N2O2]− at m/z 160.0) and NO3-containing products ([CH3NO3]− at m/z 77.0). The concentrations of these degradation products increased initially, followed by a decline, suggesting the progressive degradation of MBFD.
Compared with trypsin, the degradation process with GST showed some differences. The MS fingerprints obtained with GST revealed an initial increase followed by a decrease, generating a series of carbon cluster peaks in the low-mass regions (Fig. S5 and S9B†). In addition to carbon clusters, the degradation of MBFD with GST also yielded oxidative and nitridation products. Notably, the degree of nitridation was significantly higher with GST than with trypsin. The MS peaks gradually increased over the first 4 days of incubation with GST, while those with trypsin showed an increase over just 2 days (Fig. S5 and S9†). Afterward, the peaks for both MBFD and its degradation products began to decline (Fig. S5 and S9†), suggesting their further degradation. The changing trend of typical peaks of MBFD in wastewater was similar to that in pure water (Fig. S10 and S11†). To the best of our knowledge, the generation of nitrogen-containing degradation products from PP has been unreported before. This is likely due to dissolved nitrogen in water being introduced into the products during the degradation process.
The MS performance of MBFD in the presence of CYP450 was evaluated over time, comparing both the low-mass and high-mass regions (Fig. S3A–E†). Extending the incubation time from 0 to 14 days, the characteristic peaks of MBFD remained relatively stable in intensity across both regions, indicating a low degradation efficiency of MBFD when exposed to CYP450 (Fig. S3A–E†).
Based on MS fingerprinting, we further examined how environmental factors (such as light and environmental matrices), biological factors (like proteins and whole blood), and plastic additives impact plastic degradation. The results showed that MBFD can be degraded by GST and trypsin under different light conditions (in dark and under UV or natural light) and in the presence or absence of plastic additives, humic acid (HA) and bovine serum albumin (BSA) (Fig. S12–S20†). Under natural light, the characteristic peaks of MBFD initially increased and then decreased within 0–7 days (Fig. S12A and S13A†). Conversely, under UV light, the MBFD peaks consistently decreased and nearly vanished after 4 days, suggesting that MBFD can be fully degraded by GST and trypsin (Fig. S12B and S13B†). Comparing the results between UV and visible light, it was found that the degradation efficiency of PP under UV light was significantly higher than that under visible light (Fig. S12 and S13†). These findings are also consistent with our previously obtained results on degradation efficiency and enzyme activity under light conditions (Fig. 1 and S2†). Although the environmental matrix (HA) and biological components (BSA) affected the MBFD degradation efficiency, the MBFD characteristic peaks still showed a tendency of increase and then decrease, indicating that HA and BSA did not affect the degradation ability of GST and trypsin (Fig. S14–S16†). The nitrogenous and oxygenated products produced by degradation were different from those in water, suggesting that the environmental and biological matrices affected the type of degradation products (Fig. S14 and S15†). Additionally, the study investigated the impact of plastic additives on MBFD degradation. The antioxidant 1010 (tetrakis[beta-(3,5-di-tert-butyl-4-hydroxyphenyl)propionic acid] pentaerythritol ester), commonly used in the production of mask melt-blown cloth, was examined. When the incubation time was extended from 0 to 14 days with enzyme and antioxidant 1010, the MBFD peak initially increased and then decreased, similar to the degradation without the antioxidant (Fig. S17 and S18†). This suggests that antioxidant 1010 does not significantly affect the enzyme activity or the degradation process of MBFD. Furthermore, the study assessed the degradation capabilities of trypsin and GST in human serum (Fig. S19 and S20†). The MS peaks showed similar trends to those in water, indicating that these enzymes can effectively degrade MBFD even in the complex environment of human serum.
The enzymatic method was further extended to investigate the degradation of MBFD derived from disposable activated carbon masks, PP industrial particles, and PE particles (Fig. S21–S29†). The experimental results indicated that the characteristic peaks of PP particles, without the addition of enzymes, remained stable throughout the 7-day incubation period (Fig. S21†). This confirms that PP particles are non-degradable under natural conditions. Throughout the incubation period, both PP industrial particles and MBFD from disposable activated charcoal masks exhibited a characteristic trend of initial increase followed by decrease in their peak intensities, similar to the degradation behavior of MBFD (Fig. S22–S24†). These observations further support the broad applicability of the enzymatic approach for degrading various forms of PP plastics. It is particularly noteworthy that under dark conditions, GST was also able to effectively degrade PE particles, resulting in a significant decrease in their characteristic peaks and the production of nitrogen- and oxygen-containing degradation products, which were somewhat different from those degraded from PP particles (Fig. S25–S27†). When tested in real wastewater samples, these plastic particles were successfully degraded by both GST and trypsin (Fig. S28 and S29†). These results collectively demonstrate that GST and trypsin possess the capability to degrade diverse types of PP and PE plastics, including in real wastewater scenarios. Therefore, this study highlights their potential for practical plastic waste treatment for addressing plastic pollution challenges.
Fig. 4 shows the degradation of MBFD under the action of GST and trypsin. The degradation pathways of MBFD mainly include nitridation and oxidative degradation pathways (Fig. 4). In the presence of trypsin, the oxidation and nitridation degradation tend to induce the formation of hydroxy compounds and amides, respectively (Fig. 4A, B and S9A†). Specifically, trypsin-induced degradation of MBFD is more likely to result in oxidation and subsequent nitration, leading to the formation of amides (Fig. 4B and S9A†). Trypsin can degrade MBFD through the NO–NO3–N2O2 nitridation pathway (Fig. 4B). This may be due to the ability of trypsin to specifically cleave the amide and guanidyl terminus of positively charged glutamine and arginines. On the other hand, GST-induced degradation of MBFD appears to initiate carbonization and carboxylation (Fig. 4C–E and S9B†). The degradation of MBFD induced by GST is more likely to result in the formation of carbon cluster peaks, which are indicative of carbon nanostructures (Fig. 4C and S9B†). For the nitridation pathway, MBFD may undergo direct nitridation followed by oxidation (Fig. 4E and S9B†). Additionally, the degradation of MBFD by these enzymes may also be influenced by its physical properties, such as size, surface properties, and interfacial effects. This is consistent with previously reported mechanisms of plastic biodegradation. This process typically leads to a reduction in carbonyl groups, followed by their conversion into carboxylic acids.61 Eventually, these enzymes further break down the long carbon chains into small hydrocarbons, releasing carbon dioxide as a byproduct.62 This study revealed the degradation mechanism of plastics, which involved depolymerization and monomer fracture. It is crucial to control the biodegradation conditions to achieve maximum depolymerization without damaging PP monomers. This balance is essential for biological recycling and regeneration. Biological recycling is vital for sustainable development due to its adaptability to various raw materials and strong environmental protection. Therefore, this research contributes to the potential use of biorecycling pathways through biodegradation, supporting long-term development in this field.
The proposed degradation pathways of MBFD were substantiated using multiple methods, including FT-IR, EDX, XPS, anaerobic experiments with argon gas, gel permeation chromatography (GPC), gas chromatography-mass spectrometry (GC-MS), and stable isotope patterns (Fig. 2 and S30–S42†). Results from EDX, XPS, and FT-IR experiments provided evidence for the presence of key intermediates and products (Fig. 2 and S30–S33†). Notably, the varying trends of N- and O-containing functional groups observed in the EDX, XPS, and FT-IR spectra supported the proposed degradation pathways (Fig. 2 and S30–S33†). For instance, a comparative analysis of the elemental fingerprints of MBFD after co- incubation with GST and trypsin revealed that the XPS spectra yielded significantly higher proportions of functional groups such as –O
C–N–, –O
C–, –O–C–, –N–H–, –N–O–, and –O–H– compared to pristine MBFD over time, suggesting that MBFD was effectively biodegraded by enzymes (Fig. 2 and S30–S33†). The presence and progressive increase of the –O
C–N–, –N–H–, and –N–O– bonds in the N1 XPS spectra throughout the degradation process further corroborated the formation of important oxidation and nitridation products (Fig. S30 and S31†). Similarly, the O1 XPS spectra showed peaks corresponding to –O
C–, –O
C–N–, –O–C–, and –O–H– bonds after the biodegradation by trypsin and GST (Fig. S32 and S33†). Additionally, Ar gas was used as a protective gas to verify the N and O addition mechanisms (Fig. S34†). Almost no peaks corresponding to N- and O-containing products were obtained after 2 days of incubation with Ar gas purge (Fig. S34A, B, D and E†). However, in the presence of air, the peaks of N- and O-containing degradation products gradually increased (Fig. S34C and F†). These results evidence that MBFD can be degraded by GST and trypsin, and the N and O in the degradation products originate from the air dissolved in the solution, thus supporting the molecular mechanisms in Fig. 4. Overall, these results verified the proposed degradation pathways.
We conducted further analysis of the degradation products using GPC and GC-MS, which revealed N- and O-containing degradation products, confirming the generation of degradation products. The GPC analysis results only showed peaks for GST and trypsin, with no peaks detected for other proteins (Fig. S35†). This suggests that neither GST nor trypsin have any carry-over proteins affecting their degradation activity. After 1 day of incubation, the molecular weight distribution (MWD) of the treated PP membranes was analyzed using GPC, revealing a trend towards depolymerization, as shown in Fig. S36.† The Mw of GST-treated, trypsin-treated, and enzyme-free MBFD was 140
201, 146
504, and 157
265, respectively, showing a decrease of 10.9% and 6.8% (Fig. S36†). These results indicate that the inclusion of GST and trypsin treatments caused chain breakage in MBFD, leading to a reduction in their molecular weights. To further investigate the degradation of MBFD by GST and trypsin, we analyzed the decomposition products using GC-MS (Fig. S37–S42†). MBFD and PE plastics, which were not degraded by GST and trypsin, exhibited characteristic peaks at retention times of 16.481 and 16.482 minutes, respectively (Fig. S37 and S38†). The close retention times indicate that GC-MS cannot differentiate between PE- and PP-based MBFD because PE and PP have similar characteristics. Following degradation, the PE plastics and PP-based MBFD treated with trypsin and GST showed characteristic peaks at specific retention times of 9.846, 14.352, 16.467, 15.310, 14.989, 11.865, 9.897, 18.172, 9.682, 12.011, 15.929, 10.155, 11.213, 11.729, 12.405, 15.492, 10.888, 13.558, and 11.371 minutes (Fig. S37 and S38†). Mass spectrometry was then employed to analyze the components detected in the aforementioned retention time peaks (Fig. S39–S42†). The results indicated that the degradation products of PE included “oxalic acid, 2-ethylhexyl hexyl ester” (1), “n-hexadecanoic acid” (2), “phenol,2,2′-methylenebis[6-(1,1-dimethylethyl)-4-methyl]” (3), “octadecanoic acid” (4), “eicosyl nonyl ether” (5), “2,4-di-tert-butylphenol” (6), “benzaldehyde” (7), “13-docosenamide” (8), “dodecane” (9), “pentadecane” (10), “tetracosane” (11), “tridecane” (12), “nonadecane” (13), “hexadecane” (14), “heneicosane” (15), “eicosane” (16), “2-dimethyldodecane” (17), “octacosane” (18), and “heptadecane” (19) (see Fig. S39–S42 and Table S3†). All these compounds have high matching scores (over 80%) in the NIST library. The results indicated that the degradation products of GST and trypsin on PP included oxygen-containing compounds, nitrogen-containing compounds, and hydrocarbons (see Fig. S39–S42 and Table S3†). The presence of nitrogenation and oxidation products validated the reliability of our findings.
The stable isotope patterns of carbon, nitrogen, and oxygen further validated the proposed degradation pathways (Fig. S43 and S44†). In the negative-ion LDI-TOF MS, five nitridation and oxidation products were identified: [C2H4O]−, [C5H10O2]−, [C7H15NO + Na–2H]−, [C17H34O]−, and [CH4NO3]−. The naturally occurring stable isotopes of these elements are as follows: oxygen has three isotopes with a ratio of 16O
:
17O
:
18O = 99.763%
:
0.038%
:
0.200%; nitrogen has two naturally occurring stable isotopes with a ratio of 14N
:
15N = 99.634%
:
0.366%; and carbon has two naturally occurring stable isotopes with a ratio of 12C
:
13C = 98.893%
:
1.107%. For the nitridation products, i.e., [C7H15NO + Na–2H]− and [CH4NO3]−, the measured stable isotope patterns for C, N, and O closely matched the theoretical values (Fig. S43 and S44†). Similarly, for the oxidation products, including [12C13CH416O]−, [12C413CH1016O2]−, [12C1613C1H3416O]−, [12C1513C21H3416O]−, [12C171H3418O]−, [12C1613C1H332H16O]−, [13C1H414N16O3]−, [12C1H414N16O217O]−, and [12C1H32H14N16O217O]−, the measured stable isotope patterns for C and O were also consistent with the theoretical values, supporting the production of oxidation products (Fig. S43 and S44†).
Additionally, we analyzed the secondary structure of the proteins to detect any changes. Fig. S49† shows that the secondary structures of the two protein groups remained stable during the simulation, suggesting that binding to the substrate PP did not lead to significant structural changes in the proteins.
Subsequently, we calculated the binding free energy between the PP and enzyme (i.e., GST and trypsin).63,64 The simulation process was reliable for both two groups of systems, and the protein–substrate complexes exhibited stability. Therefore, we proceeded to analyze the binding of the substrate PP to the proteins. The non-bonding binding energies of the substrates were examined to determine the relative non-bonding binding free energies of GST–PP and trypsin–PP. As depicted in Fig. 5A, the coulombic short-range (Coul-SR) energy and Lennard-Jones short-range (LJ-SR) energy of GST–PP significantly contributed to the overall binding stability, with values of 3 ± 1 kJ mol−1 and −150 ± 18 kJ mol−1. The Coul-SR energy of trypsin–PP was 3 ± 1 kJ mol−1, while the LJ-SR energy was −64 ± 20 kJ mol−1 (Fig. 5D). Analysis of the relative free energy surface maps of the GST–PP complexes in Fig. 5B and C revealed the structure with the lowest relative binding free energy. By analyzing the interaction mode, it is evident that PP was only engaged in hydrophobic interactions with the protein. The relative free energy surface map analysis of the trypsin–PP complexes, shown in Fig. 5E and F, indicated that the structure with the lowest relative binding free energy was obtained. Furthermore, the interaction pattern analysis demonstrated that PP was engaged in hydrophobic interactions of trypsin.
The binding free energies of the substrate PP and the two groups of proteins were further analyzed using the gmx_MMPBSA program.64,65 The Gibbs free energy of GST with PP was −24 ± 4 kcal mol−1, and the Gibbs free energy of trypsin with PP was −11 ± 2 kcal mol−1 (Fig. S50†). The energy contribution of relative amino acid residues at the substrate–protein interface was also analyzed previously (Fig. S50†). To further investigate the factors influencing enzymatic degradation efficiency, molecular dynamics simulation was also performed on the CYP450-PP system (Fig. S51–S54†). The results revealed that both the substrate PP and the HEM group in CYP450-PP exhibited fluctuations of approximately 0.1 nm (Fig. S51†). Analysis of the non-bonding interactions indicated that the relative free energy contributions were 0.3 ± 0.9 kJ mol−1 for Coul-SR interactions and −147 ± 10 kJ mol−1 for LJ-SR interactions, as illustrated in Fig. S53 and S54.† The Gibbs free energy of the CYP450–PP complex was determined to be −10 ± 6 kcal mol−1, which was lower than that of GST and trypsin. This confirms previous findings that its degradation efficiency is lower compared to the other two enzymes (Fig. S54†).
The activity of trypsin was tested using Nα-benzoyl-L-arginine ethyl ester (BAEE) as the substrate, followed by measurement of UV-vis spectra. The entire process was conducted at 25 °C and pH 7.6.
:
water
:
trifluoroacetic acid in a ratio of 45
:
55
:
0.1 was used at a flow rate of 0.5 mL min−1 and a column temperature of 30 °C for enzyme analysis. The GPC system was calibrated with a polystyrene (PS) standard (K = 17.5; a = 0.67) and peptide standard solutions (cytochrome C, aprotinase, bacillus enzyme, glycine–glycine–tyrosine–arginine, and glycine–glycine–glycine) to establish a general calibration curve for molecular weight (Mw) determination.
000 rpm for 30 minutes at 4 °C. The resulting supernatant was freeze-dried and then redissolved in 1 mL of dichloromethane. For GC-MS analysis, 2 μL of the filtered supernatant was injected into the chromatograph at an injection temperature of 300 °C. The column temperature was initially set at 50 °C for 4 minutes and then ramped up to 300 °C at a rate of 20 °C min−1, with a total run time of 15 minutes. The chromatographic column utilized was a DB-5 ms, measuring 30 m in length, with an inner diameter of 0.25 mm and a column thickness of 0.25 μm. Helium served as the carrier gas at a flow rate of 0.8 mL min−1, while the scanning mode monitored ions/fragments within the 30–450 amu range.
000 steps using the steepest descent and conjugate gradient methods. This was followed by a two-stage pre-equilibrium simulation of the system. Firstly, the system underwent NVT system equilibrium for 500 ps (V-rescale temperature coupled with constant particle number, volume, and temperature).78 Secondly, NPT system equilibrium was conducted for 1000 ps (Berendsen pressure coupled with constant particle number, volume, and temperature and Berendsen pressure coupled with constant particle number, pressure, and temperature).79 All bond lengths and angles were constrained using LINCS.80 Long-range electrostatic interactions were managed using the PME method81 with a cutoff of 1.0 nm for van der Waals interactions. The temperature of the whole system was maintained at 300 K for kinetic simulations over 500 ns, with steps of 2 fs and a time interval of 10 ps to save coordinate files for analytical purposes. After obtaining the trajectory from the all-atom simulation for this system, it was analyzed using the analysis tools provided by GROMACS 2019.6 and the DulvyTools program.82,83
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d5sc03097h |
| This journal is © The Royal Society of Chemistry 2025 |