Long Van Duongab,
Phuong Anh Pham-Tran
cd,
Mateusz Chwastyke,
My Phuong Pham-Ho
cd and
Minh Tho Nguyen
*f
aAtomic Molecular and Optical Physics Research Group, Science and Technology Advanced Institute, Van Lang University, Ho Chi Minh City, Vietnam. E-mail: duongvanlong@vlu.edu.vn
bFaculty of Applied Technology, Van Lang School of Technology, Van Lang University, Ho Chi Minh City, Vietnam
cFaculty of Chemical Engineering, Ho Chi Minh City University of Technology (HCMUT), 268 Ly Thuong Kiet Street, District 10, Ho Chi Minh City, Vietnam
dVietnam National University Ho Chi Minh City, Linh Trung Ward, Thu Duc City, Ho Chi Minh City, Vietnam
eInstitute of Physics, Polish Academy of Sciences, Warsaw, Poland
fCenter for Environmental Intelligence, College of Engineering and Computer Science, VinUniversity, Gia Lam District, Hanoi, Vietnam. E-mail: tho.nm@vinuni.edu.vn
First published on 17th September 2025
The stability and electronic structure of B7Si3q (q = +, 0, −, 2− and 3−), Li3B7Si3 and Li3B10H3 clusters have been investigated through a comprehensive isomer search, with a focus on the perfect triangular planar isomer T+ of B7Si3+. Despite its double aromaticity, this form is thermodynamically unstable. Two strategies for the stabilization of the triangular form are proposed: (i) sequential addition of σ electrons and (ii) incorporation of Li atoms to reduce excessive negative charge. The former reveals that the addition of up to four electrons gradually improves its stability, with T2− being the most favourable isomer in this charged state. The latter strategy leads to the star form emerging as a global minimum of the ternary Li3B7Si3 cluster, which is significantly more stable. To elucidate the origin of these stabilizations, ring current maps and AdNDP, ELFσ and ETS-NOCV analyses were employed. Results show a shift from the dominant σ aromaticity in T+ to a more balanced σ–π aromatic character in Li3B7Si3, akin to benzene. The AdNDP analysis reveals that T+ possesses four σ delocalized bonds, whereas Li3B7Si3 contains only three, serving as one of the indicators of reduced σ-delocalization. ELFσ analysis further revealed an enhanced peripheral σ delocalization in Li3B7Si3, highlighting the critical role of edge-localized electrons in stabilizing planar aromatic clusters.
Several factors contribute to the stabilization of a molecular system. It is generally observed that in atomic clusters where aromaticity is present, such as in benzene, there is a dominant stabilizing factor; most of the reported stable clusters exhibit a double aromaticity, and this characteristic is often regarded as a hallmark of their structural stability. In contrast, less stable structures are typically characterized by a lack of electron delocalization or, in other words, by an absence of aromaticity. In some rare cases, a cluster isomer that exhibits double (σ + π) aromaticity is found to be unstable. This raises a legitimate question as to whether a decrease in electron delocalization, of either the σ or π system, in a structure is associated with enhanced thermodynamic stability. This is an apparently absurd question within the chemical orthodoxy, but it is worth raising. In this context, we set out to search for such a compound using quantum chemical computations. Our extensive search led to the stable configurations of the binary B7Si3+ cluster cation and subsequently, the ternary Li3B7Si3 cluster. Herein, we report a strategy for stabilizing this type of isomer and explore how variations in the σ electron delocalization influence the stability of planar clusters.
Using the BHandHLYP functional with the 6-311+G(d) basis set, origin-independent current densities CTOCD-DZ2 (ref. 25) and bond current strengths (BCS)26 were calculated, and these parameters were further decomposed into π and σ contributions. The BHandHLYP functional was calibrated by a recent benchmark study for reliably describing magnetic properties.27 Magnetic current density maps and BCS were computed and visualized by using the SYSMOIC28 software package. All current density maps of planar structures were computed in the molecular plane and in a plane located at 1 Bohr above and parallel to the molecular plane, under the influence of a magnetic field applied perpendicular to the molecular plane. The ring current is characterized by following the convention on the direction of the induced current, that is, a clockwise circulation indicates a diatropic current, which is associated with aromatic character, whereas a counterclockwise circulation corresponds to a paratropic current, which is associated with antiaromatic character.
Chemical bonding characteristics are also analyzed using the Adaptive Natural Density Partitioning (AdNDP) method29 as implemented in the Multiwfn program suite.30,31 Electron localization function (ELF)32,33 maps are constructed using the Dgrid 5.0 package34 and visualized by ChimeraX software.35
Energy decomposition analysis (EDA) combined with the natural orbital for the chemical valence (NOCV) method was performed at the B3LYP-D3BJ/def2-QZVP36 level using the ORCA program package.37 In this scheme, the interaction energy (ΔEint) is partitioned into electrostatic (ΔEelstat), Pauli repulsion (ΔEPauli), orbital (ΔEorb), and dispersion (ΔEdisp) contributions.
Ab initio molecular dynamics (AIMD) simulations are carried out with the ORCA program package,37 using the PBE exchange–correlation functional with D3 dispersion correction and the def2-TZVPD basis set.38,39 The simulations were performed using a Nosé–Hoover chain thermostat at 300 K. A time step of 2.0 fs was employed to simulate 20 ps of AIMD to 20 ps, with atomic positions recorded every 10 fs.
Fig. 2 presents three π-MOs and frontier σ-MOs, including the doubly degenerate σ LUMO of T+ (B7Si3+.13). The addition of electrons to T+ to transform the degenerate LUMO into the HOMO can increase only the number of σ electrons but retains its 6 π electrons. Consequently, this allows us to figure out how changes in the σ electron number can influence structural stability. To further investigate this issue, we incrementally added electrons to the B7Si3+. Stable structures of B7Si3q are also presented in Fig. 1. The addition of one electron to T+ eliminates the imaginary frequency, making the corresponding neutral T (B7Si3.11) a local energy minimum and reducing its relative energy with respect to the global minimum B7Si3.1 to 19 kcal mol−1. Further electron additions continue to reduce the relative energy to ∼12 and ∼4 kcal mol−1 for T− (B7Si3−.7) and T2− (B7Si32−.3), respectively, regarding their global minima. Upon full occupation of the degenerate LUMO of T+ with four electrons, the resulting trianion T3− (B7Si33−.4) becomes less stable than B7Si33−.1 by ∼4 kcal mol−1, along with the emergence of double-chain ribbon isomers such as B7Si33−.1 and B7Si33−.3. This observation is in line with earlier findings suggesting that the accumulation of electrons in an atomic cluster generally leads to a reduction in structural dimensionality; that is, going from 3D → 2D → 1D.41
In view of the inherent instability of highly charged polyanions with respect to electron rejection, a commonly employed approach to stabilize them is the incorporation of alkali metals into the structures. As shown in Fig. 3, this approach proves to be effective, with three lithium atoms supplying three electrons to the cluster.
An isolobal substitution Si = [BH] is thus carried out, revealing perfectly planar D3h LiSi.1 (Li3B7Si3 is abbreviated as LiSi) and LiH.1 (Li3B10H3 is abbreviated as LiH) structures emerging as the global energy minima for both Li3B7Si3 and Li3B10H3, respectively. Such planar arrangements are exceptionally rare because Li+ ions typically favour the formation of three-dimensional structures when bonding to boron clusters.42,43 Moreover, a planar geometry of boron clusters is advantageous for their synthesis via deposition onto solid surfaces.44,45 The substitution of three Si atoms with three [BH] units increases the number of atoms in the cluster by three, resulting in a greater number of possible isomers. Nevertheless, Li3B10H3 still prefers a planar configuration as the most stable form, LiH.1, with the next-lowest-energy isomer LiH.2 adopting a distorted geometry and lying only ∼4 kcal mol−1 above LiH.1. In this study, we focus on elucidating the stability of LiSi.1, while the case of LiH.1 is explained in an entirely analogous manner, with the corresponding discussion provided in the SI.
The T1 diagnostic values from single-point CCSD(T)/aug-cc-pVTZ calculations for the structures presented in Fig. S1 and 3 are summarized in Table 1. The results indicate that several isomers exhibit T1 values exceeding the thresholds of 0.02 for closed-shell and 0.04 for open-shell systems.46 However, the most stable isomers (B7Si3+.1, B7Si3.1, B7Si3−.1, B7Si32−.1, and B7Si33−.1), as well as the triangular form (Tq), display T1 values within the reliability limits for a single-reference description. Notably, upon the addition of three Li atoms, the structures exhibited an even more pronounced single-reference character, as reflected by the lower T1 values of Li3B7Si3 and Li3B10H3 isomers.
Species | Electron | B1–B2 | B2–B3 | B1–Si1 | Total of B ringa |
---|---|---|---|---|---|
a The B ring is the B1B2B3B4B5B6 ring. | |||||
T+ | σ | 14.9 | 17.5 | 7.0 | 97.2 |
π | 3.7 | 4.8 | 0.6 | 25.5 | |
σ/π | 4.0 | 3.6 | 11.7 | 3.8 | |
All | 18.6 | 22.3 | 7.6 | 122.7 | |
LiSi.1 | σ | 5.2 | 14.9 | 5.2 | 60.3 |
π | 4.7 | 5.8 | 1.2 | 31.5 | |
σ/π | 1.1 | 2.6 | 4.3 | 1.9 | |
All | 9.9 | 20.7 | 6.4 | 91.8 | |
LiH.1 | σ | 5.9 | 14.0 | 10.7 | 59.7 |
π | 5.3 | 6.4 | 2.3 | 35.1 | |
σ/π | 1.1 | 2.2 | 4.7 | 1.7 | |
All | 11.2 | 20.4 | 12.7 | 94.8 |
Firstly, the magnetic current density maps for T+ and LiSi.1 are presented in Fig. 5, in comparison to those of benzene, showing contributions from σ, π, and all electrons at 1 Bohr above the molecular plane, and the maps contributed from σ electrons located in molecular planes are shown in Fig. S2 (SI). Their bond current strengths (BCS) are shown in Fig. 6; each arrow in the figure represents the net current strength as a percentage relative to the reference value of 12 nA T−1, which corresponds to the net diatropic current strength of benzene.47 The corresponding figures for Li3B10H3.1 are also provided in the SI as Fig. S3 and S4. The BCS of selected bonds for T+, LiSi.1, and Li3B10H3.1 are also presented in Table 1, with units in nA T−1.
From the magnetic ring current maps of T+ shown in Fig. 5, the first remarkable observation is that the T+ cation exhibits double aromaticity, even though it possesses an imaginary frequency and a high energy location. The aromatic character of different compounds can be compared by evaluating the magnitude of BCS values calculated for the bonds in the B1B2B3B4B5B6 ring of T+ and LiSi.1 (cf. Fig. 6 for atom labels), relative to the C–C bonds in benzene. Ring current maps indicate that the σ aromaticity is significantly pronounced, whereas the π-aromaticity is relatively weak. Although T+ possesses, like benzene, 6 π-electrons, the π BCSs for the B1–B2 and B2–B3 bonds of T+ amount to 3.7 and 4.8 nA T−1, respectively, whereas π electrons in benzene contribute 5.8 nA T−1 to C–C bonds. While the σ electrons in benzene are localized, the diatropic domain in the outer ring is larger than the paratropic domain in the inner ring, resulting in large σ BCSs for C–C bonds, reaching a value of 6.1 nA T−1.28 The σ electron ring current map of T+ shows a strong diatropic current throughout the entire structure, without any paratropic domain observed, indicating that σ electrons in this structure are mostly delocalized. The BCS values of the B1–B2 and B2–B3 bonds formed from σ electrons in T+ are up to remarkably high values of 14.9 (126%) and 17.5 nA T−1 (147%), respectively.
The total BCS of the whole B1B2B3B4B5B6 ring in T+ of σ electrons of 123 nA T−1 is nearly four times as great as that of the corresponding π electrons (97 nA T−1). Thus, an imbalance emerges between delocalization of the σ and π electrons in the T+ species. If this imbalance can be reduced, leading to an increased structural stability, it can be viewed that a planar geometry can confer a greater thermodynamic stability when the aromatic contributions from σ and π electrons become more balanced.
A similar analysis was conducted for LiSi.1, in which four σ electrons were added from the electron transfer of Li atoms to the two-fold degenerate LUMO (5e′) of T+ (cf. Fig. 2), turning it into the two-fold degenerate HOMO in LiSi.1 (cf. Fig. 4), revealing a shift in behaviour that more closely resembles that of benzene. As six π electrons remain, the π aromaticity in LiSi.1 slightly increases compared to that in T+, as reflected by the π-BCS values for the B1–B2 and B2–B3 bonds that amount to 4.7 and 5.8 nA T−1, respectively (cf. Table 1). In contrast, despite an increased number of σ electrons, the σ-BCS values for the B1–B2 and B2–B3 bonds tend to decrease to 5.2 and 14.9 nA T−1, respectively. The reduction in σ electron BCS values at the B1–B2 bond is substantial in going from 14.9 nA T−1 in T+ to 5.2 nA T−1 in LiSi.1.
While a strong diatropic outer ring current near B1–B2 can still be observed in LiSi.1, the emergence of a significant paratropic inner ring current (indicated by the red circle in Fig. 5) contributes largely to this BCS decrease. The B atom in the [BH] group appears to facilitate a better π-electron delocalization from its 2pz orbital in LiH.1 than contributions from the 3pz orbital of Si and the 2pz orbital of B in LiSi.1. As a result, the total BCS value of LiH.1 (35.1 nA T−1) is higher than that of LiSi.1 (31.5 nA T−1). The BCS contribution from σ electrons in LiH.1 (59.7 nA T−1) was observed to be slightly lower than that in LiSi.1 (60.3). Overall, these results indicate that the σ BCS to π BCS ratio (cf. Table 1) in LiH.1 (∼1.7) is smaller than that in LiSi.1 (∼1.9). These preliminary results suggest that LiH.1 possesses a higher thermodynamic stability than LiSi.1, which will be further verified by the ELF analysis presented in the following section.
This observation also suggests a shift in the σ electron delocalization from the entire structure in T+ toward the periphery in LiSi.1. This hypothesis is further supported by AdNDP and ELFσ analyses presented in the following paragraphs.
The AdNDP analyses of T+ and LiSi.1 are presented in Fig. 7, and LiH.1 is presented in Fig. S5. Each structure possesses six π electrons, thus satisfying Hückel's counting rule. Their aromatic character is clearly manifested, as illustrated in the corresponding ring current maps (cf. Fig. 5). As initially expected, changes in the number of σ electrons significantly affect the structural stability. The lone pairs on Si and localized electrons in both T+ (cf. (1), (2), and (3) bonds) and LiSi.1 (cf. (7), (8) and (9) bonds) are quite similar to each other, with bonds in LiSi.1 containing higher occupation numbers (ONs). T+ contains one 9c–2e σ bond (5) and three 10c–2e σ bonds (6), indicating that T+ possesses eight delocalized σ electrons. Upon the addition of four σ electrons to T+, the resulting LiSi.1 structure did not contain 12 delocalized σ electrons as might be expected, but instead only six delocalized (11c–2e) σ electrons as indicated in bonds (11). The remaining six localized (3c–2e) σ electrons of LiSi.1 formed three σ bonds as indicated in bonds (10) (cf. Fig. 7). This suggests that the addition of σ electrons to T+ induces a radical reorganization of its σ electronic structure, redistributing the delocalized and localized electrons. As a result, LiSi.1 exhibits fewer delocalized σ and more localized σ electrons, which is reflected in the change in aromatic character observed in the B1B2B3B4B5B6 ring. The results of the AdNDP analysis of LiH.1 yield are internally consistent with those of LiSi.1, demonstrating the isolobal relationship between these two isomers.
![]() | ||
Fig. 7 AdNDP bonding patterns for (a) the T+ isomer of B7Si3+ and (b) the global minimum LiSi.1 of Li3B7Si3. The occupation numbers (ONs) are indicated. |
The change in the behaviour of σ electrons in going from T+ to LiSi.1 is remarkable. Therefore, analysis of the electron localization function of σ electrons (ELFσ) was carried out for these two species to further elucidate this specific behaviour. The ELFσ for both T+, LiSi.1, and LiH.1 are presented in Fig. 8 at different isosurface values, with red circles (with the label from bif(a) to bif(h)) added to highlight the locations of bifurcations corresponding to each isosurface value.
The determining bifurcation values for both T+ and LiSi.1 are all greater than 0.8, indicating a high degree of delocalization of σ electrons within these structures.48 The bifurcation observed at the bif(a) positions reflects the electronic separation of either the Si lone pair (in T+ and LiSi.1) or the B–H 2c–2e bond (in LiH.1) from the rest of the molecular domain. The bifurcation observed at the bif(c) positions reflects delocalization in peripheral regions. The bifurcations at other positions correspond to a delocalization inside the structure. Except for the bif(a) at the critical ELF = 0.63 in LiH.1, the other domains split at critical ELF values above 0.8, indicating a high degree of electron delocalization. The highest bifurcation value of T+ is 0.91 at the bif(d) position. The bif(d) position corresponds to the high degree of electron delocalization observed in the delocalized bond (5), as revealed by the AdNDP analysis of T+ (Fig. 7).
A similar delocalization bond (5) is not present in LiSi.1; instead, it is replaced by three localized 3c–2e bonds (bond (10) in Fig. 7), indicating a reduction to a lower critical ELF value of 0.85 at bif(f) of LiSi.1. This transformation also leads to the formation of three localized 3c–2e basins associated with the B1B2B7, B3B4B7, and B5B6B7 triangles in the LiSi.1 and LiH.1 structures, resulting in a more uniform distribution of σ-electrons throughout the framework. This observation suggests that excessive electron delocalization can reduce structural stability, and the redistribution of electrons to lower aromatic character can be an effective means of enhancing stability. Thus, although the degree of σ aromaticity tends to reduce in going from T+ to LiSi.1 (and LiH.1), as reflected by a marginal reduction in the highest bifurcation value of ELFσ from 0.91 to 0.89 (and 0.88), the structural stability increases.
To gain deeper insights into the bonding characteristics, ETS-NOCV analysis was carried out for LiSi.1 using the [Li3]3+ and [B7Si3]3− fragmentation scheme, based on the natural atomic charges from the NBO analysis, as illustrated in Fig. 3. The results, as summarized in Table 2, reveal that the interaction is strongly dominated by the electrostatic attraction (ΔEelstat = −704 kcal mol−1), consistent with the large opposite charges of the fragments. In addition, a substantial orbital contribution (ΔEorb = −185 kcal mol−1) indicates significant orbital overlap and charge-transfer effects, highlighting that the bonding is not purely ionic but involves a noticeable degree of covalency. The Pauli repulsion is relatively small (+76 kcal mol−1) compared to the attractive terms, and dispersion plays only a minor stabilizing role (−10 kcal mol−1). Overall, the total interaction energy (ΔEint = −823 kcal mol−1) points to an exceptionally strong and stable bonding situation that combines predominant ionic character with appreciable covalent stabilization. The first five deformation densities and the corresponding eigenvalues and energetic contributions for LiSi.1 are depicted in Fig. S6 (SI). Among them, the first three σ-type channels exhibit very large eigenvalues (∼0.92 e) with a combined stabilization energy of −308 kcal mol−1, indicating that σ interactions dominate the bonding. The deformation density plots (Δρ3) reveal charge depletion (red) near the Li centers and charge accumulation (blue) in the vicinity of Si, consistent with a pronounced σ back-donation from the Li atoms directly into the orbitals of Si. In contrast, the two π-type channels have smaller eigenvalues (∼0.24 e) and minor energetic contributions (∼6–7 kcal mol−1 each), suggesting only a secondary role in the overall interaction. These results clearly demonstrate that the [Li3–B7Si3] bonding is primarily governed by strong electrostatic attraction, complemented by significant σ back-donation, while π contributions remain negligible. Importantly, this finding is consistent with the above conclusion regarding the attenuation of σ aromaticity, which in turn enhances the overall stability of LiSi.1.
ΔEint | ΔEorb | ΔEelstat | ΔEPauli | ΔEdisp |
---|---|---|---|---|
−822.7 | −184.9 | −704.4 | 76.1 | −10.4 |
The potential energy profile of LiSi.1 at 300 K (Fig. 9) exhibits stable fluctuations around a constant mean value without significant drifts or abrupt changes, confirming that the planar structure remains dynamically robust throughout the 20 ps AIMD trajectory. In addition, AIMD trajectory analyses from both top and side views (see SI: file Li3B7Si3.mp4) clearly reveal that the Li atoms exhibit small oscillatory excursions above and below the boron plane, but no net out-of-plane migration was observed; the oscillations are reversible and the Li atoms returned to their equilibrium positions throughout the 20 ps simulation.
Given that the LUMO of the T+ isomer is a doubly degenerate σ MO, the addition of four electrons is considered an effective approach to stabilize this star form. Incremental electron addition was carried out up to the trianionic charge state, and the relative energy between 1q and the lowest-lying isomer of B7Si3q was found to consistently decrease in going to the dianion T2− and the trianion T3−.
A second strategy for stabilization involves the replacement of the polyanionic charges by introducing lithium atoms that are capable of donating electrons while reducing the overall negative charge. This approach leads to the ternary Li3B7Si3 cluster whose global energy minimum remains planar, given that the T+ form is originally less stable than the lowest-energy isomer B7Si3+.1 by as much as 40 kcal mol−1.
In employing five analytical methods, namely the ring current map, bond current strength (BCS), AdNDP, ELF, and ETS-NOCV, the origin of the enhanced stability resulting from the addition of σ electrons was determined. The ring current maps point out that the LiSi.1 species retains a double (σ + π) aromaticity, similar to that of T+. However, a key difference is observed: in T+, the σ aromaticity is predominant over the π aromaticity, while in LiSi.1, the π aromaticity is enhanced while the σ aromaticity is reduced, approaching a BCS balance between both sets of σ and π electrons, as seen in benzene.
The AdNDP analysis indicates that the T+ form possesses four delocalized σ bonds, a feature that contributes to its instability. Although the electronic structure of LiSi.1 arises from the addition of four σ electrons to the doubly degenerate LUMO of T+, the AdNDP results show that LiSi.1 features only three delocalized σ MOs, consistent with the stability expected from Hückel's counting rule. This suggests that the resulting structure not only gains electrons but also undergoes a reorganization of its σ electron framework. Subsequent ELFσ analysis is consistent with all other analytical methods, indicating that a reduction in σ electron delocalization contributes to an enhanced structural stability.
The 20 ps AIMD simulations at 300 K demonstrate that LiSi.1 retains a dynamically robust planar structure, with Li atoms exhibiting only small reversible oscillations above and below the boron plane without any net out-of-plane migration.
The additional datasets supporting this article are given as part of the SI: Supplementary information: Cartesian coordinates of the optimized geometries, information on the electronic structures, magnetic ring current maps, electron localization function maps, and NOCV deformation densities of the clusters considered. See DOI: https://doi.org/10.1039/d5ra04954g.
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