Raed Obaid Saleha,
Ebraheem Abdu Musad Saleh*b,
M. M. Moharambc,
Subasini Uthirapathy
*d,
Suhas Ballale,
Abhayveer Singhi,
Anima Nandag,
Subhashree Rayh,
Abdul_Kareem Nasirf and
Rzaq Shailaan Kaursheadj
aDepartment of Medical Laboratories Techniques, College of Health and Medical Techniques, University of Al Maarif, Al Anbar 31001, Iraq
bDepartment of Chemistry, College of Science and Humanities in Al-Kharj, Prince Sattam bin Abdulaziz University, Al-Kharj, 11942, Saudi Arabia. E-mail: e.saleh@psau.edu.sa
cChemical and Electrochemical Processing Department, Central Metallurgical Research and Development Institute (CMRDI), P. O. Box 87, Helwan 11421, Egypt
dPharmacy Department, Tishk International University, Erbil, Kurdistan Region, Iraq. E-mail: subasini.uthirapathy@tiu.edu.iq
eDepartment of Chemistry and Biochemistry, School of Sciences, JAIN (Deemed to be University), Bangalore, Karnataka, India
fCentre for Research Impact & Outcome, Chitkara University Institute of Engineering and Technology, Chitkara University, Rajpura, 140401, Punjab, India
gDepartment of Biomedical, Sathyabama Institute of Science and Technology, Chennai, Tamil Nadu, India
hDepartment of Biochemistry IMS and SUM Hospital, Siksha ‘O’ Anusandhan (Deemed to be University), Bhubaneswar, Odisha-751003, India
iMazaya University College, Dhiqar, Iraq
jLaboratories Techniques Department, College of Health and Medical Techniques, Al-Mustaqbal University, 51001, Babylon, Iraq
First published on 14th May 2025
Nowadays, single-atom nanozymes (SAzymes) and single-atom catalysts (SACs) have flourished in the field of catalysis owing to their high catalytic performance and exceptional atom utilization efficiency, thereby enhancing biosensing capabilities. In comparison to natural enzymes, SAzymes offer several advantages, including cost-effectiveness, ease of production, and robust catalytic activity, making them highly promising for biosensing applications. Notably, SAzymes demonstrate superior catalytic efficiency and selectivity compared with traditional nanozymes. In this context, this review delineates the enzyme-like characteristics of SAzymes aimed at enhancing food safety, with a focus on the primary factors that influence their catalytic efficacy. The discussion has been expanded to include the use of SAzymes for screening various pesticide residues, particularly organophosphate pesticides (OPPs), carbamates, acetamiprid, pyrethroids, and other pesticide types, which are present in agricultural food products. These applications are realized because of the exceptional properties of single-atom structures, including enhanced reaction kinetics, high active site density, and tunable electronic properties. The integration of SAzymes into sensing platforms holds great potential for the development of cost-effective, sensitive, and reliable tools for the real-time monitoring of pesticide residues. Finally, this paper highlights the current challenges and outlines potential opportunities for the advancement of SAzyme-based biosensing technologies.
Biosensor techniques are very valuable tools for pesticide residue analysis. A biosensor is a diagnostic tool that combines a biological recognition factor (e.g., enzymes, antibodies, or nucleic acids) and a physicochemical transducer to identify the existence of specific analytes.6 Among various biosensor systems, nanozyme-based optical and electrochemical sensors have attracted increasing interest. Nowadays, nanozymes are increasingly recognized as viable alternatives to natural enzymes owing to their numerous enzyme-mimicking properties, ease of mass production, cost-effective synthesis, excellent stability, convenient storage, and adjustable catalytic capabilities.7,8 Nanozymes are synthetic materials that possess enzyme-mimicking properties and are characterized by their nanoscale structure. The pioneering work on nanozymes was carried out via Gao and coworkers in 2007, during which they identified the peroxidase (POD)-like capabilities of Fe3O4 nanoparticles (NPs).9 Since then, nanozymes have been created utilizing a variety of nanomaterials like noble metal NPs, carbon-based nanomaterials, MOFs (metal–organic frameworks), COFs (covalent organic frameworks), and semiconductor metal oxide NPs. However, bulk nanozymes have been limited by their active sites and surface area exposure for enzymatic catalysis, which hinders the reaction performance.
With modern characterization methods like X-ray absorption near-edge spectroscopy and aberration-corrected high-angle annular dark-field scanning transmission electron microscopy, the single-atom catalysts (SACs) were recognized and have generated a growing interest within the domain of heterogeneous catalysis.10 SACs featuring atomically dispersed metal sites on their supports optimize the atomic utilization efficiency and enhance the accessibility of a well-defined active site density. Decreasing the size of metal materials to the atomic scale, in conjunction with the incorporation of metalloenzyme-like catalytic centers, imparts exceptional catalytic activity to SACs. For example, Lee and colleagues incorporated the Fe–N4 active site, which is a precise copy of the hemin cofactor, into graphene. This modification resulted in a remarkable 700-fold enhancement in catalytic activity, while also demonstrating exceptional selectivity for hydrogen peroxide (H2O2).11 In 2019, a novel subcategory of nanozymes, referred to as single-atom nanozymes (SAzymes), was introduced12 and quickly transformed the research frontier in the nanozymes field. SAzymes are distinguished by their optimal atom utilization, high density of active sites, and well-defined electronic and geometric structures, offering clear models for mechanistic investigations.13,14 In terms of catalysis, SAzymes are notable for their unique construction that effectively harmonizes and merges the strengths of heterogeneous and homogeneous catalysts.15 The active places are distributed almost uniformly across the support substrates, thereby enhancing the selectivity, activity, and stability of the nanoparticles (NPs). Datye et al., for the first time, successfully synthesized SACs by employing cerium dioxide (CeO2) to trap Pt species.16 In Yan's study, small CeO2 clusters were employed as supports, resulting in a preferential orientation of monatomic platinum (Pt) on the (111) crystal plane of CeO2.17 In comparison to CeO2 cluster nanozymes, Pt/CeO2 SAzymes demonstrated catalase (CAT)-like function that was approximately 10-fold greater, as well as superoxide dismutase (SOD)-like reactivity that was about four times more potent. Additionally, the polymerase function of Pt/CeO2 SAzymes was found to be 3–10 times higher, with the primary reaction rates also increasing by a factor of eight. Moreover, the SAzymes exhibited extended catalytic activity without any significant deterioration over a period of one month, demonstrating consistent performance. It is important to highlight that certain unique SAzymes, like Fe–Nx SACs, and their coordination environments at single-atom sites can replicate the configuration of natural enzyme active sites. These characteristics render them as ideal candidates for the construction of biosensors that enable the precise analysis of target molecules at very low concentrations.18 Therefore, in this study, we provide a comprehensive summary of the approaches used to enhance the enzyme-like features of SAzymes and their catalytic behaviors by examining the various factors that influence these attributes. Furthermore, we discuss recent progresses in the use of SAzyme-derived nanoprobes for the on-site identification of pesticide residues in agricultural food products, with a specific focus on organophosphate pesticides (OPPs), carbamates, acetamiprid, pyrethroids, and other pesticides. We ultimately examined the limitations and challenges associated with scaling up SAzymes for commercial use in food contaminant analysis.
It is noteworthy that the case studies described consistently utilize H2O2 and TMB as chromogenic platforms for measuring the activity of POD-mimicking SAzymes. This preference can be attributed to several characteristics of TMB, including its colorimetric response, strong affinity for the POD catalytic unit, and low synthesis cost.39 SAzymes with POD-like activity can catalyze the oxidation of colorless o-phenylenediamine (OPD) and TMB as substrates, resulting in the production of colored products in the presence of H2O2. It should be noted that Zhao and colleagues explored the POD-mimicking catalytic function of Fe SAzymes, which were capable of catalyzing the decomposition of hydrogen peroxide to generate free radicals.40 Additionally, density functional theory (DFT) assessments were employed to further validate of the POD-like catalytic response procedure of Fe SAzymes. Based on an FeN4 site embedded in graphene as an experimental model, the POD-mimicking function of Fe SAzymes was investigated. The energy profile and reaction pathway of the POD-like catalytic activity on the confined FeN4 site are illustrated in Fig. 1. Initially, the H2O2 molecules can spontaneously detach from the FeN4 sites, leading to the release of an H2O molecule and the creation of a Fe@O intermediate. Afterwards, the formation of an O@Fe@O intermediate led to the dissociation of another H2O2 molecule at the opposite side of the central FeN4 sites. Following this, the presence of extra O species in the O@Fe@O structure proved advantageous for the adsorption of the initial TMB molecule by facilitating the formation of an O–H bond. Consequently, a hydrogen atom from TMB was readily removed to produce O@Fe–OH and oxTMB. Carbon nanomaterial derived from ZIF-8, comprising atomically dispersed Zn atoms, exhibited exceptional POD-like catalytic activity and functioned as a highly effective SAzyme.41 The study thoroughly examined the structural development of prepared SAzymes in order to elucidate the relationship between the structure and activity of SAzymes. Furthermore, through the use of DFT evaluations, it was determined that the coordinatively unsaturated Zn–N4 building served as the functional site of the SAzymes. The catalytic performance of the SAzyme is illustrated in Fig. 1B. The H2O2 molecules were taken up by the active sites of Zn–N4 within the SAzyme (i), resulting in an adsorption energy of −0.45 eV(ii). The triggered hydrogen peroxide underwent easy dissociation by a homolytic pathway, causing the production of two hydroxyl radicals (iii). Subsequently, a –OH detached from the lone zinc site, leading to the generation of OH* and the active hydroxyl radical (iv).
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Fig. 1 (a) Diagram of the catalytic reaction procedure of the peroxidase route of SAzymes. This figure has been reproduced from ref. 40 with permission from the Royal Society of Chemistry, copyright 2019. (b) Suggested peroxidase-like catalytic performance of PMCS. This figure has been reproduced from ref. 41 with permission from Wiley, copyright 2019. |
In the meantime, atomically dispersed single Fe SSN (iron site nanozyme) was also created for the purpose of detecting glucose.42 In this study, Fe SSN was produced through the thermal decomposition of a hybrid material consisting of Fe(phen)x supported on magnesium oxide (Fig. 2). The as-synthesized Fe SSN complex demonstrated peroxidase-like activity by converting hydrogen peroxide into hydroxyl radicals in the presence of TMB, with an absorbance peak at 652 nm. The νmax and Km rates for the reaction of Fe SSN with H2O2 are determined to be 1.32 × 10−7 M s−1 and 0.36 mM, respectively. The resultant values for Fe SSN with TMB are 2.04 × 10−7 M s−1 and 0.53 mM, respectively. The Km values for H2O2 were observed to be ten times lower than those found with HRP, indicating the Fe SSN's strong affinity for H2O2. The Fe SSN was additionally examined for the colorimetric identification of glucose through the utilization of an agarose-based hydrogel. The linear range and limit of detection (LOD) toward glucose by the hydrogel-derived probe were 0.3–10 mM and 0.3 mM, respectively.
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Fig. 2 (a) The schematic illustration for the preparation of Fe SSN. (b) Modified colorimetric detection of glucose. (c) Integrated agarose-based hydrogel colorimetric detection of glucose. This figure has been reproduced from ref. 42 with permission from Wiley, copyright 2020. |
Currently, both experimental and theoretical investigations were carried out to produce a series of molybdenum single-atom nanosize enzyme (MoSA–Nx–C) by manipulating the coordination amounts of individual Mo places.43 The Mo–Nx–C SAzyme series was synthesized through Mo-ZIF-8 MOF pyrolysis deposited on N-doped porous carbon platforms (Fig. 3). The ability of various Mo–Nx–C SAzymes to mimic the POD activity was analytically assessed through the colorimetric oxidation of TMB at 652 nm. Among the catalysts evaluated, Mo–N3–C demonstrated the highest peroxidase-like activity. X-ray absorption fine structure (XAFS) spectroscopy was employed to demonstrate that the quantity of N atoms conjugated with Mo played an important role in identifying the POD specificity and activity of the Mo–N3–C catalyst. These studies elucidate the relationship between the selectivity and structure, providing a crucial approach for the intentional design of highly specialized nanozymes.
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Fig. 3 Diagram of the synthesis of MoSA-NA-C and its morphological/crystalline features: (A) schematic of the synthesis method and (B) XRD spectrum, (C) HAADF-STEM elemental mapping and (D–F) HAADF-STEM images. This figure has been reproduced from ref. 43 with permission from Elsevier, copyright 2021. |
Characteristic | Natural enzymes | SAzymes |
---|---|---|
Stability | Sensitive to changes in harsh conditions (e.g., temperature, pH, and ionic conditions) | More stable under extreme conditions |
Reusability | Typically, lower reusability | Can often be reused multiple times in industrial processes, especially with immobilization |
Catalytic activity | Specific and efficient in catalyzing biochemical reactions | Boost the catalytic performance by the synergetic collaboration effect from different single atoms, the supports, or doping |
Biocompatibility | Biocompatible | Improved-biocompatibility via surface engineering of SAzymes |
Cost | Less expensive, especially when sourced from biological systems | More expensive to design and synthesize |
Applications | Might not be suitable for various applications | Suitable for novel applications, especially in areas like sensory systems, bioengineering, and drug development due to unique electronic/geometrical structural advantages |
An alternative synthetic approach (top-down) avoids the high-temperature sintering of nanoparticles (NPs), but it necessitates a specialized strategy to break the robust metal–metal (M–M) bonds in metal precursors, while capturing the released metal atoms using appropriate carriers. The techniques for seizing the liberated metal atoms through metal-support interactions resemble those previously mentioned above.56 Direct pyrolysis of the metal precursors that include thermodynamically unstable metal species, such as zinc, mercury, and cadmium, can be effectively utilized to produce SAzymes. Ding et al.57 synthesized NiSX nanoparticles on cadmium sulfide (CdS) NPs to create a volatile CdS–NiSX composite, which was then combined with polyacrylonitrile through an electrospinning technique. During the high-temperature pyrolysis process, the sulfur species initially volatilized, establishing carbon frameworks, while the cadmium species rapidly evaporated after reaching 765 °C, resulting in the formation of hollow macroporous fibers. The remaining nickel species were reduced to nickel NPs at 850 °C. Further pyrolysis at 950 °C resulted in the formation of nickel single-atom catalysts. Room-temperature methodologies such as defect engineering and chemical reduction not only require less energy compared to high-temperature pyrolysis, making them more sustainable, but also can achieve better control over the size and distribution of active sites, leading to improved catalytic properties. This broadens their applicability in various fields, including catalysis and biomedical applications.29,58
The engineering and rational design of the active centers of SAzymes are highly significant and should not be overlooked. Certain SAzymes possess active sites that closely resemble those found in natural enzymes. This design feature has the potential to enhance the catalytic activity and specificity of conventional nanozymes. For example, Lin and coworkers developed a type of Fe–N–C-based SAN, and this SAN possesses a lot of atomically isolated Fe–Nx active sites.66,67 Such configuration could efficiently mimic the active sites of heme enzymes. In this study, the researchers employed the zinc-atom-assisted technique to isolate iron within the polypyrrole-derived carbon nanowire precursor. After polymerization, multiple pyridinic nitrogen atoms are incorporated into the carbon matrix whereas also fixed with Fe, and the Zn ions are evaporated. Finally, its POD-like activity reached 42.8 U mg−1. Dong and colleagues also regulate the coordination number of nitrogen, specifically as FeN5, which is analogous to the active site of cytochrome P450.12 The authors investigated the host-guest architecture of MOF-encapsulated iron phthalocyanine (FePc), where the isolated FeN4 sites of FePc undergo reconstruction when subjected to heat treatment. Ultimately, the pyridinic nitrogen species can generate additional FeN5 sites, aided by the confinement effect of the MOF. These active sites exhibit favorable oxidase-like activities. The coordination number plays a crucial role in influencing the activity of SACs. This phenomenon is primarily attributed to the diverse nitrogen coordination environments, which can modulate the electronic density of the central metal and, consequently, influence its catalytic performance. Another important factor to consider is the capacity to regulate the coordinated nitrogen with precise numerical values and structural configurations, allowing for an accurate replication of the active site of the natural enzyme. In this regard, a report indicates that SAzymes with FeN5 activity exhibited significantly enhanced OD-like capabilities compared to SAzymes centered around FeN4, with a performance level ranging from 30 to 1000 times higher than that of conventional nanozymes.12 In another study, Cui's team found that the oxygen molecule exhibits a preference for adsorption onto the FeN3 site surface in a side-on orientation. Through theoretical analysis, they further determined that the affinity of O2 towards FeN3 is notably greater compared to FeC3, FeN4, and FeN5.31 The metal site coordination environment of SACs can undergo significant alterations through the incorporation of heteroatoms such as B, P, and S, or the introduction of defects in the materials. Therefore, the integration of heteroatom modifications has the potential to significantly enhance the intrinsic activity of active sites. This strategy has proven to be highly effective in amplifying the enzyme-like performance of SACs. For instance, the Fe–N–C SAC utilizes heteroatoms with varying electronegativities and atomic radii to dope the carbon substrate. This doping results in alterations to the charge densities and electron spin of the Fe–N4 center. This redistribution enhances the selectivity and catalytic function of the enzyme, and has been widely applied in the energy field. Chen and colleagues developed a configuration in which the Fe–N4 species were uniformly dispersed at the atomic level on hierarchical carbon layers decorated with nitrogen and sulfur. This configuration was found to reduce the energy barrier associated with the oxygen reduction reaction (ORR).68 The presence of heteroatoms can unevenly affect the redistribution of charges and moderately influence catalytic capabilities. This phenomenon can also be attributed to their impact on the catalytic properties of central metal atoms through long-range interactions. For example, Ding and colleagues engaged chlorine (Cl) to modulate the Fe–Nx active center through a closely coordinated interaction, resulting in the creation of SAC with uniform FeN4Cl active sites.57
In addition to optical biosensing, electrochemical biosensors have garnered significant attention as a suitable platform for integrating SAzymes due to their advantages, including high sensitivity, cost-effectiveness, ease of operation, and the capability for in situ real-time monitoring. Furthermore, the combination of SAzymes with electrochemical biosensors has the potential to amplify the electrochemical signal. Zhu's team prepared an atomically dispersed Ir–N–C SAC by using a template-assisted technique, which exhibited brilliant ORR activity.73 This Ir SAzyme was coupled with AChE to act as an electrochemical detecting platform for the determination of organophosphorus pesticides. The catalytic current density presented a strong correlation with the logarithm of organophosphorus pesticide concentrations, demonstrating high selectivity and sensitivity. The same group also created a POD-like Fe3C@C/Fe–N–C SAzyme as a H2O2 electrochemical sensor with exceptional sensitivity (LOD = 0.26 μM) and selectivity.74 Another electrochemical detection substrate was developed using a single-atom Ru biomimetic SAzyme. Leveraging its high stability, selectivity, and sensitivity in identifying the oxidation of uric acid (UA) and dopamine (DA), this Ru SAzyme-based biosensor can effectively diagnose UA and DA in real biological serum samples. Similar simultaneous UA determination was also realized via a Co SAC-derived electrochemical biomimetic probe. The low detection limits and broad linear detection ranges of this biosensor using Co SAzyme could meet the requirements of practical diagnosis. These electrochemical biosensors utilizing SAzyme offer a novel approach for real-time and in vivo analysis of living organisms. Mao and colleagues introduced a biosensing platform utilizing a Cu–N2 SAzyme for the specific electrochemical H2O2 reduction reaction (HPRR) rather than ORR.75 By virtue of the preference to H2O2 over O2 molecules, a Cu–SAC-based microsensor demonstrated a strong response to H2O2 without O2 interferences. This outcome confirmed the potential practical use of SAzymes for real-time quantitative analysis.
Taking advantage of the exceptional catalytic characteristics of metal–metal bonds, atomic clusters have the potential to enhance the catalytic performance of SACs through the synergistic effects of dual atomic-scale sites. In this context, Co3N clusters were employed to facilitate the synthesis of Co SACs using a simple doping technique.80 The use of X-ray absorption spectroscopy confirmed the existence of functional metal places in the synergetic dual-site atomic catalysts of Co3N@Co SACs as Co3–N and Co–O4 moieties. Co3N@Co SACs proved to be an excellent co-reactant, significantly increasing the chemiluminescence signal by 2155.0-fold, a notably superior effect compared to the 98.4-fold increase observed with pure Co SACs. The dual-site atomic catalysts demonstrated synergistic effects in promoting the decomposition of H2O2 into singlet oxygen and superoxide radical anions, resulting in exceptional catalytic performance. To assess the feasibility of these catalysts, the potential application of Co3N@Co SACs as chemiluminescent nanoprobes was investigated in the development of a highly sensitive immunochromatographic assay for quantifying pesticide residues. In another study, Song's research team developed and validated a SACe-N-C nanozyme as POD-like with exceptional activity.81 Based on this work, a paper-derived biosensor was developed by integrating bioactive paper with a 3D printed substrate to facilitate the colorimetric detection of pesticide residues. As illustrated in Fig. 4, the process of sensor construction included the use of Ach, AChE, H2O2, and TMB onto the bioactive paper to establish a cascade catalytic response method. The newly designed portable biosensor exhibited quick colorimetric sensing (within 30 minutes) of pesticides, such as methamidophos, omethoate, carbosulfan, and carbofuran in various vegetables and fruits samples with LODs as low as 71.51, 55.83, 74.98, and 81.81 ng mL−1, respectively.
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Fig. 4 Fabrication mechanism of SACe-N-C nanozyme bioactive paper for sensing organophosphorus carbamate pesticide residues (PPy nanowire: poly-pyrrole; CTAB: cetyltrimethyl ammonium bromide; APS: ammonium peroxydisulfate; OP: organophosphorus pesticides; CP: carbamate pesticides; AChE: acetyl-cholinesterase; ACh: acetylcholine; Ch: choline). This figure has been reproduced from ref. 81 with permission from Elsevier, copyright 2022. |
Tai and colleagues designed 3D porous nanoribbons of graphene oxide doped with cerium (Ce-GONRs) by cross-linking GONRs with Ce3+ ions.82 Ce-GONRs exhibit outstanding dual enzyme-like capabilities (OXD-like and POD-like), owing to their porous structure and synergistic effects, and they can be reused at least 5 times after recycling. The found that carbaryl (a carbamate insecticide) and diafenthiuron (a thiourea insecticide) were able to significantly impede the dual enzyme-like functions of Ce-GONRs, owing to the multi-interface synergistic influence of hydrogen bonding and π–π stacking. Inspired by this mechanism, the enzyme-free colorimetric probe was developed for the analysis of carbaryl and diafenthiuron. The linear concentration ranges of carbaryl and diafenthiuron were 2–800 ng mL−1 and 10–1500 ng mL−1, and the detection limit of these were 0.23 and 0.57 ng mL−1 in actual lake water and apple samples, respectively.
More recently, a multifunctional SAzymes, referred to as 3D Ni, N-codoped porous carbon (Ni-NPC), was developed to demonstrate exceptional adsorption properties and a range of enzyme-like functions, including peroxidase and oxidase activities.83 These characteristics arise from the well-dispersed Ni sites and unique mesoporous thin-shell building. The well-organized adsorption capability of Ni-NPC was evaluated for three carbamate pesticides like carbaryl, isoprocarb, and metolcarb. Moreover, a colorimetric sensing technique for detecting carbamate was designed based on its strong peroxidase-like catalytic function and sequential catalytic interactions with acetylcholinesterase. Additionally, a mobile colorimetric probe utilizing a hydrogel sphere in conjunction with a smartphone platform was developed. This probe allows for the quantitative, on-site, and rapid monitoring of carbamate pesticides, with an impressively low LOD of 1.5 ng mL−1. Significantly, this sensor was effectively exploited for assessing carbamate levels in vegetable samples (specifically rape and pakchoi) and lake water, thereby advancing the progress of real-time sensing technologies for environmental and food screening. In another study, Wang's group synthesized POD-like SAzymes with a substantial iridium (Ir) loading of 5.31% on GO nanosheets [Ir(III)/GO] by a coordination response involving the oxygen-containing groups in GO and the Ir(III) complex.84 The construction approach avoids the use of pyrolysis and nitrogen doping techniques, which are commonly employed methods to enhance the enzyme mimic activity of graphene oxide. Ir(III)/GO SAzymes exhibit exceptional peroxidase-like activity due to the highly reactive Ir atoms, while lacking oxidase-like activity. Due to the outstanding performance of the POD-like function, a facile and highly responsive colorimetric platform for detecting pesticides has been developed. The fabricated detecting substrate provides a highly effective method for identifying pirimicarb with a “switch-on” mechanism, within a linear range of 10–300 nM and a LOD of 2.81 nM. Furthermore, the recognition system was constructed as a portable testing kit, consisting of a sample processing tube and a testing swab. With the assistance of a color-reading application, the testing kit is capable of sensing pirimicarb at a LOD of 3.31 nM. It is remarkable to achieve such high quantification sensitivity through the utilization of a facile colorimetric approach. This work not only introduces a new technique for synthesizing Ir-based SAzymes, but also reveals the exceptional potential of Ir(III)/GO in the biosensing field.
Owing to their great surface energy, single-dispersed atoms have a tendency to aggregate in the absence of any force acting between the atoms and the supports.85 Hence, the selection of suitable carriers for immobilizing single-dispersed atoms, like carbon and metal oxides materials, is crucial for the creation of stable SACs. The process of high-temperature calcination is often utilized to immobilize single-dispersed atoms onto supports and prevent their aggregation. However, this method inevitably leads to poor water dispersibility of SACs and the loss of labeling elements. In this context, Luo and colleagues synthesized hybridized MOFs Fe2O3/MIL-100(Fe) to serve as carriers for immobilizing cobalt CSACs (Fig. 5).86 In addition to the inherent advantages of MOFs, such as good water dispersibility and remarkable porosity, the carriers exhibit significantly enhanced capacity for loading cobalt atoms due to the incorporation of metal oxides Fe2O3. In contrast to the original MOFs MIL-100(Fe), the carriers prove enhanced loading capability, with the cobalt element being loaded at a level of 4.69 wt%. The introduction of cobalt atoms into hybridized MOFs Fe2O3/MIL-100(Fe) significantly enhanced the specific surface area of the carriers by 68 times. CSACs at a concentration of 1.0 μg mL−1 exhibited the capability to facilitate the conversion of different reactive oxygen species derived from H2O2, leading to a significant increase in the chemiluminescent emission of the luminol-H2O2 system by up to 2297 times. Taking advantage of these appealing characteristics, the chemiluminescent immunoassay method applied CSACs as highly responsive signal nanoprobes for identifying carbendazim in Chinese medicinal herbs with a LOD down to 1.8 pg mL−1 and a linear range of 10 pg mL−1-50 ng mL−1.
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Fig. 5 (A) Solvothermal technique employed to synthesize CSACs immobilized on hybridized MOFs Fe2O3/MIL-100(Fe). (B) Chemiluminescent immunoassay technique used for the detection of carbendazim, with CSACs serving as signal assays. This figure has been reproduced from ref. 86 with permission from Elsevier, copyright 2022. |
The majority of the current SAzymes exhibit peroxidase-like characteristics, facilitating the production of various ROS for enhanced bioassays and effective biotherapy applications.86,91 Considerable efforts have been dedicated to augmenting their function by increasing the loading quantities of active sites or modifying their coordination environments.92 Nevertheless, SAzymes with SOD-like properties have received minimal interest due to their limited utility, except in cytoprotection. It is imperative to address this deficiency by developing SAzymes with antioxidant enzyme-like properties to remove ROS, and expand their applications in biomedicine and bioassays. Manganese oxide (Mn3O4) has been shown to possess favorable antioxidant properties in the removal of H2O2 and OH·, thereby prompting investigations into the development of Mn SAzymes with significantly improved efficacy. Herein, a coprecipitation technique conducted at room temperature is proposed for the synthesis of Mn SAzymes incorporated within the structures of PBAs on TMSs, facilitated by the use of large surfactants. This method exhibits excellent water dispersibility and a high loading capacity of up to 13.5 wt%.93 Atomically dispersed Mn elements exhibit excellent SOD-like activity in removing O2˙−, while TMSs have the capability to absorb luminescent signals across a broad spectrum of wavelengths. Therefore, the developed Mn SAzymes displays synergistic quenching ability to the emission of a ROS-based chemiluminescent probe. A competitive immunoassay technique was established for the quantification of acetamiprid on a LFTS substrate, exploiting it as a powerful chemiluminescence quencher. The technique for sensing acetamiprid displays a concentration range of 1.0–1.0 × 103 pg mL−1 and a LOD of 0.3 pg mL−1. Its accuracy has been confirmed by identifying acetamiprid in medicinal herbs with satisfactory recoveries.
Among SAzymes, Fe–N–C SAzymes are distinguished for their distinctive building, which contains iron atoms bound to carbon and nitrogen atoms in a carbonaceous structure. Fe–N–C SAzymes demonstrate significant catalytic efficiency and selectivity in ORR (oxygen reduction reactions), allowing them to stably and efficiently carry out catalytic processes.94 Particularly, Fe–N–C SAzymes are widely utilized as peroxidases for the catalysis of H2O2 decomposition, leading to the generation of ROS-like superoxide free radicals (O2˙−) and hydroxyl radicals (·OH). For instance, Feng and colleagues developed Fe–N–C SAzymes that facilitate the conversion of H2O2 into ·OH, serving as an antimicrobial agent.95 Likewise, Wang's group reported on Fe–N–C SAzymes with peroxidase-like properties to detect acetylcholinesterase in the presence of H2O2.96 Hence, the Fe–N–C nanomaterial exhibits unique physicochemical properties, rendering it a promising candidate in the development of aptasensors due to its cost-effectiveness and enhanced stability. A current work initially integrated Fe–N–C SAzymes with a DNA aptamer to create a aptasensor using the Fe–N–C SAzyme to detect cancer cells.97 In this platform, DNA aptamers were linked with Fe–N–C SAzymes. DNA aptamers identify the target molecule, while Fe–N–C SAzymes act as a peroxidase to catalyze H2O2 into OH·, which further oxidizes TMB to oxTMB. This process can be sensed through a colorimetric probe. Nevertheless, the peroxidase function of Fe–N–C SAzymes necessitates the addition of H2O2, which is destructive and unstable. The existence of H2O2 restrictions the utilization of the Fe–N–C SAzyme-derived aptasensors. Based on these criteria, Yu et al.98 introduced a Fe–N–C SAzyme-derived aptasensor to detect acetamiprid in water samples. In this study, a straightforward dual-confinement method was utilized to produce Fe–N–C SAzymes, which were then evaluated for their efficacy as oxidase-like nanozymes. The synthesized Fe–N–C SAzymes offered unique oxidase-like properties, and showed the ability to interact with a chromogenic indicator, TMB, acting as the signal transduction component in their assay. Moreover, they found that aptamers modified with thiol groups were able to efficiently reduce the oxidase-like function of Fe–N–C SAzymes. Through the utilization of the FeN–C-TMB system and Ace-specific aptamers, a novel aptasensor was created, demonstrating remarkable sensitivity (with a LOD of 16.9 nM) and specificity. It also provided favorable recoveries ranging from 99.7% to 101.17% in sensing actual river water samples. This study presents a pragmatic approach for detecting environmental pollution using oxidase-like Fe–N–C SAzymes within an aptasensor.
Nanozymes with exceptional catalytic characteristics have emerged as promising signal markers, attracting significant interest among researchers because of their integration with lateral flow assays (LFAs).71,99 Most recently, Mao's team introduced a signal-enhanced nanozyme lateral flow assay (NLFA) for detecting acetamiprid in tomato samples based on a bivalent triple helix aptamer.100 However, in contrast to conventional LFAs, the NLFAs needed additional operation stages, such as timing the nanozyme capture, dropping substrate, and chromogenic substrate preparation. These necessities clearly increase the error sources and decrease the convenience of operation. In order to address the aforementioned issue, some researchers have integrated reagents to enhance the signal onto LFA strips, allowing for their automated delivery to the test line (T line) of the LFA strip.101,102 In this context, more recently, Mao and his team developed an Apt-CSNLFA system that incorporates a chromogenic substrate and nanozyme amplification within LFA strips (Fig. 6).103 This innovation allows for the automated and delayed chromogenic substrates release during testing. The precise administration of chromogenic substrates was achieved through the incorporation of a SCF, which was constructed at the end of the sample pad. The substrates that are conveyed automatically have the potential to undergo catalysis for color change through the nanozyme immobilized on the T line. The suggested Apt-CSNLFA has the capability to eliminate the standard procedures associated with NLFA strips, such as timing the nanozyme capture, adding substrate drops, substrate preparation and making it as simple as the conventional Apt-LFAs. This methodology was utilized in an acetamiprid aptamer LFA, and the established Apt-CSNLFA realized a LOD of 0.17 ng mL−1 with a concentration range of 1–150 ng mL−1 toward acetamiprid. The Apt-CSNLFA exhibited comparable analytical capabilities to traditional aptamer NLFAs, while simplifying the process by eliminating the need for additional steps associated with catalytic signal amplification. Furthermore, the novel approach was utilized for the identification of tomato samples contaminated with acetamiprid. Recovery rates between 95% and 106.4% were achieved, indicating the significant potential for the rapid quantification of acetamiprid.
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Fig. 6 Diagram of the sensing principle of the Apt-CSNLFAs. (a) Configuration of LFAs; (b) representation of the local amplification of RCF; (c) differentiation between positive and negative tests for acetamiprid. This figure has been reproduced from ref. 103 with permission from Elsevier, copyright 2023. |
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Fig. 7 Diagram illustrating the large-scale production of Fe–N/C SAzymes and the colorimetric system utilizing Fe–N/C SAzymes for the determination of OPs. This figure has been reproduced from ref. 114 with permission from Elsevier, copyright 2024. |
The presentation of OPs can prevent ACP activity, causing a decline in the AA production and promoting the color variation of TMB. Nevertheless, AA was generated by the active ACP in the absence of OPs, subsequently decreasing the formation of blue oxTMB. Through the integration of smartphones and RGB analysis, color variation data is converted into digital format to enable in situ and real-time measurement of OPs. In this way, the suggested approach can realize accurate and super-sensitive analysis of OPs with a broad concentration range of 1–100 nM and low LOD of 0.4177 nM in actual food samples and environment. Moreover, thanks to the outstanding catalytic function, large-scale synthetic method, and low-cost of the developed Fe–N/C SAzymes, a biosensor using Fe–N/C SAzymes has noticeable marketability benefits.
Based on the Fe–N/C SAzymes, a novel colorimetric smartphone-based system has been developed for malathion detection.115 The SAzymes consist of Fe–Nx groups that are individually dispersed at the atomic level and supported by porous carbon materials derived from MOFs. The as-prepared single-atom nanozymes possessed oxidase-like properties, enabling the conversion of TMB into oxTMB without the need for H2O2. Additionally, the AA2P, an ACP platform, has the potential to undergo hydrolysis, resulting in the production of AA. The generated AA can decrease the production of oxTMB, leading to a noticeable reduction in the intensity of the blue color. The existence of malathion inhibited the activity of ACP and restricted the production of AA, ultimately facilitating the restoration of the catalytic TMB chromogenic reaction. A new colorimetric assay has been successfully developed for the quantification of malathion with a LOD of 0.42 nM under optimized operational parameters. Furthermore, the method was effectively utilized for quantifying malathion in environmental and food samples using the described approach. Additionally, the effectively integrated paper/smartphone probe enabled the rapid, and sensitive, reliable determination of malathion with a LOD of 1 nM. In another study in 2023, a colorimetric recognizing system was developed to identify OPs by coupling nanozymes with natural enzymes (Fig. 8a).116 Fe–N/C SAzymes were synthesized through a one-pot synthesis technique by pyrolyzing alkaline lignin. A variety of characterization techniques were employed to clarify the microstructural features and reaction mechanisms of the nanozymes. In the material, N mostly interacts with Fe in the pyrrole nitrogen form, catalytic hydrogen peroxide will produce hydroxyl radicals (·OH). The Fe–N/C exhibits favorable peroxidase-like characteristics and generates signals in UV detection, following the addition of TMB. Thus, the integration of the catalytic characteristics of Fe–N/C with the incorporation of AChE for the quantification of OPs in soil, exemplified by chlorpyrifos, is proposed. The production of ATCh catalyzed by AChE may impede the color signal. Conversely, the existence of chlorpyrifos hinders the function of AChE and returns the response absorbance. The chlorpyrifos content can be determined by monitoring the alterations in color. The detection ranges for chlorpyrifos using this method was determined to be between 0.05 and 10.0 μg mL−1, with a LOD of 2.11 ng mL−1. Very recently, Ren and colleagues synthesized two iron single-atom anchored N-doped carbon materials with varying N-coordination numbers through by manipulating of the pyrolysis temperature.118 The Fe/CN-800-A catalyst demonstrated remarkable oxidase-like activity and specificity due to the presence of FeN2 sites, achieved through pyrolysis at 800 °C, followed by acid leaching. This observation is strongly correlated with the N-coordination number of iron sites, as evidenced by both DFT calculations and experimental analyses. The Fe/CN-800-A catalyst exhibits oxidase-like properties by converting colorless TMB into blue oxTMB. The presence of TCh, a product of AChE-mediated hydrolysis of ACTh, can inhibit this colorimetric reaction, allowing for the determination of chlorpyrifos concentration.
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Fig. 8 (a) Diagram illustrating the construction procedure of the Fe–N/C SAzymes and the colorimetric sensing approach of OPs. This figure has been reproduced from ref. 116 with permission from Elsevier, copyright 2023; (b) construction process of the colorimetry/electrochemical dual-mode aptasensor based on the Fe-SAzymes quantitative and qualitative identification of multiple OPs. This figure has been reproduced from ref. 117 with permission from Elsevier, copyright 2024. |
The widespread application of SAzymes is hindered by the irreversible aggregation of single atoms and a limited number of functional groups on their surface. This issue arises from the highly carbonized substrate surface and the relatively harsh conditions of the pyrolysis pretreatment.119 Hence, it is crucial to carefully choose a suitable technique for preparing SAzymes and a method for immobilizing bioreceptors. ZIF-8, a significant constituent of MOFs, is employed to uniformly disperse single atoms within the carbon framework to create Fe-SAzymes.120 Meanwhile, the immobilization of bioreceptors can be achieved by modifying the surface of Fe-SAzymes with amino-aldehyde compounds. Given that, in 2024, Wang's research team reported a dual-mode electrochemical and colorimetric technique for the simultaneous determination of multiple OPs pesticide residues in vegetables.117 As shown in Fig. 8b, Fe-SAzymes are developed through the Fe atoms incorporation into ZIF-8, taking advantage of the diverse boiling points of Fe and Zn during high-temperature pyrolysis. The Fe-SAzymes were surface-modified by attaching amino-aldehyde groups to facilitate the immobilization of the aptamer. These modified Fe-SAzymes exhibited peroxidase-like activity, resulting in the oxidation of TMB to form the blue oxidized product, TMBox. This reaction generated a colorimetric signal at approximately 452 nm under visible light. When the wide-spectrum aptamer interacted with OPs, a complex formed in close proximity to the nanozyme surface, influencing its catalytic function due to the toxic effects. Consequently, the concentration of OPs in the sample can be quantified based on this toxic impact. Furthermore, the complex containing Methylene Blue (MB) exhibited proximity to the chip interface because of a conformational alteration, which resulted in changes to the rate of ion migration and the potential of the electrode membrane. The OPs content can be evaluated by monitoring the alteration in potential. By leveraging their particular benefits, these two techniques mutually improved and validated the sensitivity and accuracy of the aptasensor with a LOD as low as 3.55 fM and a wide concentration range of 10−13 to 10−2 M, enabling the quantitative and qualitative identification of multiple OPs.
Single-atom metal–nitrogen–carbon (M–N–C) nanomaterials are considered a promising alternative to natural enzymes. However, their catalytic activity is still limited by certain constraints. Modifying the electronic and geometric structures of atomic active sites through the coexistence of atomic clusters and single atoms presents a promising approach for designing superior M–N–C catalysts. In this context, Zhao and coworkers introduced a model Fe–N–C catalyst, denoted as FeAC/FeSA-NC, which combines Fe single atoms with Fe atomic clusters on N-doped porous carbon.121 This catalyst was synthesized using a ligand-mediated approach involving the pyrolysis of Fe(II)–phenanthroline complexes assembled within zeolitic-imidazolate-frameworks (ZIF-8@Fe-Phen). The FeAC/FeSA-NC catalyst prepared in this study reveals remarkable oxidase-like activity through the activation of oxygen into the reactive oxygen species, O2− (superoxide radicals). DFT simulations prove that the interaction between iron clusters and single iron atoms results in a reduction in activation energy, thereby increasing the catalytic performance. As a concept application, the FeAC/FeSA-NC nanozyme is exploited for the ratiometric fluorescence assessment of OPs and acetylcholinesterase activity. This approach relies on the inhibitory effect of thiols on the enzymatic activity of the nanozyme. The established ratiometric nanoprobe for OPs identification fulfills a brilliant linearity over 0.005 to 50 ng mL−1, and a LOD as low as 1.9 pg mL−1. A brief description of the quality assurance parameters (e.g., name of the SANzyme, LOD, and LDR) related to such studies is provided in Table 2. The LOD of SANzyme is typically lower than that of other nanozymes when detecting the same analyte. Pesticide residues can be detected more quickly and accurately in environmental samples, such as water, soil, and air, when using SANzyme compared to other nanozymes. Sensors based on SANzyme have also been employed for on-site detection of pesticide residues, providing a new method for real-time and online monitoring. Additionally, harnessing the catalytic properties of individual SANzyme molecules facilitates the degradation and immobilization of pesticide residues, offering innovative solutions for pollution control.
Name of the SANzyme | Target contaminant | Sensing substrate | LDR | LOD | Reference |
---|---|---|---|---|---|
Co3N@Co SACs | Imidacloprid | H2O2 | 0.05–10 ng mL−1 | 1.7 pg mL−1 | 80 |
SACe-N-C | Omethoate, methamidophos, carbofuran, and carbosulfan | AChE | — | 55.83, 71.51, 81.81, and 74.98 ng mL−1, respectively | 54 |
Ce-GONRs | Diafenthiuron and carbaryl | TMB | 10–1500 ng mL−1 and 2–800 ng mL−1 | 0.57 and 0.23 ng mL−1 | 82 |
Ni-NPC | Carbamate | ATCh | — | 1.5 ng mL−1 | 122 |
Ir(III)/GO SAzymes | Pirimicarb | ATCh-H2O2 | 10–300 nM | 2.81 nM | 84 |
MOFs Fe2O3/MIL-100(Fe) | Carbendazim | H2O2 | 10 pg mL−1 to 50 ng mL−1 | 1.8 pg mL−1 | 86 |
Mn SAN | Acetamiprid | — | 1.0–10 000 pg mL−1 | 0.3 pg mL−1 | 123 |
Fe–SAs/NC | — | H2O2 | 2 to 70 U L−1 | 0.56 U L−1 | 96 |
Fe–N–C SAzymes | Acetamiprid | TMB | — | 16.9 nM | 124 |
Apt-CSNLFA | Acetamiprid | — | 1–150 ng mL−1 | 0.17 ng mL−1 | 103 |
Fe–N/C SAzymes | Organophosphorus | TMB | 1–100 nM | 0.4177 nM | 114 |
Fe–N/C SAzymes | Malathion | TMB-H2O2 | — | 0.42 nM | 115 |
Fe–N/C SAzymes | Chlorpyrifos | TMB-ATCh | 0.05–10.0 μg mL−1 | 2.11 ng mL−1 | 116 |
Fe/CN-800-A | Chlorpyrifos | ATCh | 1–50 ng mL−1 | 0.25 ng mL−1 | 118 |
SA-Fe-NZ | Organophosphorus | TMB | 10−13 to 10−2 M | 3.55 fM | 117 |
FeAC/FeSA-NC | Organophosphorus | AChE | 0.005–50 ng mL−1 | 1.9 pg mL−1 | 121 |
In comparison to natural enzymes, the inherent catalytic efficiency of SAzymes, which includes both activity and selectivity, does not meet the expected levels. SAzymes typically exhibit limited selectivity and possess multienzyme-like function, which renders them susceptible to interference from analogs with high background levels (for example, the detection of H2O2 may be compromised by O2). To address this issue, it is advisable to modulate the electronic structure of SAzymes by emulating various aspects of natural enzymes, including electronic and geometric characteristics such as coordination environments and oxidation states. Additionally, the implementation of theoretical calculations to facilitate the rapid screening of enzymatic activity is recommended. Furthermore, the synergistic effects arising from the interaction of various single atoms, their supports, or doping strategies present significant opportunities for enhancing the catalytic performance of SAzymes. It is essential to modify SAzymes by incorporating specific functional groups to enhance their biocompatibility and hydrophilicity, in order to ensure the desired properties of stability and selectivity. Clarification of the catalytic mechanism is important for the design of superior SAzymes comprising stability, specificity/selectivity, and catalytic activity. Particularly, the application of DFT, recognized as an effective approach for calculating and estimating the descriptors that affect catalytic activity, holds great importance for the investigation and prediction of catalytic behavior and the associated mechanisms. However, it remains very complex and expensive to use DFT for a substantial number of chemical interactions, and the estimate of the catalytic function of SAzymes is far more challenging than the validation of experimental outcomes through DFT, especially in terms of model construction. Machine learning is an effective and attractive device to support DFT in calculating the structure–activity correlation of SAzymes. Despite significant advancements in the application of SAzymes within the biological domain, their development remains in the early stages. For instance, in the biosensing field, it is confined to the analysis of restricted targets and the diagnosis strategies are somewhat monotonous (electrochemical, fluorescence, and colorimetric assays). Thus, other output modes like photoelectrochemical sensing, and surface-enhanced Raman must be extended. In order to address this issue, it is essential to develop bifunctional SAzymes that integrate the characteristics of other functional materials. From a materials perspective, the precise regulation of active sites at the atomic scale presents significant challenges. Initially, active metal atoms tend to self-assemble, leading to the formation of nanocrystals during the synthesis process. Although most nanocrystals can be removed through acid washing, complete elimination is not always feasible, and certain all-metal-based materials cannot employ this method. Moreover, realizing the accurate regulation of SAzymes by uniformly separated single-atom sites remains an issue. The same concern arises when modifying SAzymes with targeted biomacromolecules and functional groups, as well as achieving well-controlled parameters such as size, shape, stability, charge, and surface chemistry. Designing and synthesizing appropriate structures of SAzymes presents a significant challenge in order to achieve optimal performance for applications in environmental protection, food safety, and biomedical research.
We believe there is significant potential for interdisciplinary research in the field of SAzyme applications, particularly in medicine, biology, electrical engineering, mechanical engineering, and materials science. For instance, integrating SAzyme with 3D printing technology facilitates the development of wearable electronics and portable point-of-care biosensors for continuous closed-loop monitoring. Nevertheless, we contend that further research is essential before considering commercial utilization. It is crucial to verify the long-term durability and stability of SAzyme-based systems before they can be practically implemented and commercialized.
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