K. W.
Torre
* and
J.
de Graaf
Institute for Theoretical Physics, Center for Extreme Matter and Emergent Phenomena, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands. E-mail: k.w.torre@uu.nl
First published on 13th March 2023
Locally (re)structuring colloidal gels – micron-sized particles forming a connected network with arrested dynamics – can enable precise tuning of the micromechanical and -rheological properties of the system. A recent experimental study [B. Saint-Michel, G. Petekidis, and V. Garbin, Soft Matter, 2022, 18, 2092] showed that local ordering can be rapidly induced by acoustically modulating an embedded microbubble. Here, we perform Brownian dynamics simulations to understand the mechanical effect of an oscillating microbubble on the next-to-bubble structure of the embedding colloidal gel. Our simulations reveal hexagonal-close-packed structures over a range that is comparable to the amplitude of the oscillations. However, we were unable to reproduce the unexpectedly long-ranged modification of the gel structure – dozens of amplitudes – observed in experiment. This suggests including long-ranged effects, such as fluid flow, should be considered in future computational work.
Gels coarsen over time, as the system relaxes toward equilibrium, and their bulk properties can strongly depend on the preparation history,40 including oscillatory-shear,41 and steady-shear protocols.42,43 That is, the preparation can leave a clear signature in the microstructure of the gel,43 which expresses itself in the mechanical response of the material.44 Modifying a gel's properties via external means has mostly focused on the bulk response. However, for many processes, it can be favorable to apply these modifications locally both for colloidal45 and other types46 of gel.
Recently, Saint-Michel et al. showed that a deformable inclusion, taking the form of a (micro)bubble, can be used to locally tune a gel's microstructure.47 In their experiments, ultrasound was used to cause the bubble to contract and expand, inducing a periodic strain on the surrounding gel. The study revealed a non-trivial rearrangement of the colloidal network into a crystalline structure. The most interesting feature is the long range – comparable to the bubble radius – over which the rearrangements took place, when only small oscillations (∼1% of the bubble diameter) were employed. The exact physical mechanism behind this long-range rearrangement remains unclear. Locally perturbing the system using ultrasound and gaseous inclusions can also be useful to probe the rheological response at the scale of the microstructure.48–51 It is therefore worthwhile to better understand the interaction between inclusions and the embedding colloidal gel.
In this work, we use computer simulations to investigate bubble-oscillation based local reordering of colloidal gels. Our model is based on an effective, Asakura–Oosawa-like description of depletion interactions between the colloids, following an earlier analysis of gelation.32 The microbubble is described using a bead-spring model subjected to an external (radial) forcing that models pressure changes, due to the ultrasound. We take into account only the mechanical interactions in our model, i.e., we ignore hydrodynamic interactions between the colloids and porous-medium flow.
For experimentally relevant colloid volume fractions, we vary the colloid-bubble size ratio, the frequency, and amplitude of the oscillations. This allowed us to construct a state diagram that highlights the effect of the oscillations. We find that crystalline reordering into a hexagonal closed-packed state around the bubble is possible under the following two conditions. (i) Multiple layers of colloids need to be compressed by the extensional driving of the bubble. (ii) The frequency of the oscillations is large enough to avoid extracting colloids from the gel network. Turning to the range of the rearrangements, our analysis reveals that this is roughly twice the amplitude of the oscillation. This is a much smaller range than was reported in ref. 47, which suggests that there is a missing ingredient to the modeling. Within the scope of this work, we do not resolve this open problem, however, we do comment on its likely origin, fluid flow, which is not included in our description. The present study lays a solid foundation for future work in this direction.
The rest of this paper is organized as follows. We first introduce our numerical method. Next, we cover how we analyze our results, before we show the state diagram. This is followed by a discussion of the relevant time scales and an outlook on follow-up studies.
Under these assumptions, the overdamped equations of motion for a single colloid in our system read:
![]() | (1) |
We model the microbubble as a collection of points that define a geodesic polyhedron. The facets spanned by the vertices represent the bubble surface. We emulate the internal pressure by adding a constant outward-pointing force acting on each vertex. Surface tension is modelled by connecting neighboring vertices via harmonic springs. The spring constant and equilibrium pressure are tuned in such a way that the bubble has a mean radius of 〈R〉 at rest. The energy scale associated with the spring constant ks = 107kBTσ−2, where σ is the colloid diameter, and we used an equilibrium pressure p0 = Ωks/4π〈R〉, with Ω ∈ [0.22,3.14]10−3 a dimensionfree coefficient given by the bubble tessellation. Our choices ensure that when the bubble oscillates, it forces the gel out of the way sufficiently vigorously not to cause distortions in its (nearly) spherical shape; in line with the experimental observations. The resulting model bubble is represented in Fig. 1.
We had to account for topological constraints imposed by working with a spherical surface, namely that it cannot be tessellated with hexagonal tiles only, 12 pentagonal defects must be present.52 These defects introduce distortions away from perfectly spherical in our bubble surface, as can be appreciated from the coloring in Fig. 1. Red denotes a depression in the bubble surface with respect to its mean radius, whilst blue indicates an increase of the radius. The effect is exaggerated in our representation, as the deviations are typically less than 1%. In constructing our geodesic sphere, we have ensured that the defects are located on the vertices of an icosahedron. This localization is convenient, as it allows us to take slices between the defects, where the change in curvature is minimal. In total there are six such slices possible, which proved sufficient to perform a quantitative analysis of the gel, to which we will return to shortly.
We modeled the gel according to the methods detailed in ref. 32. In brief, we simulate only the colloids and account for the presence of the polymers that cause depletion attraction via a generalized “high-exponent” Lennard-Jones potential
![]() | (2) |
Our simulations were performed in periodic, cubic boxes with an edge length L ∈ [50σ, 120σ]. We have chosen system sizes such that periodicity does not influence our measurements. That is, the bubble does not interact with itself, not even via the perturbed gel medium. In each simulation, we used a volume fraction ϕ = 0.44. This is a rather high value for colloidal gelation, but was chosen to closely approximate that of the experiment.47 The bubble radius at rest was chosen to be R0 ≡ 〈R〉 ∈ [10σ, 40σ]. This choice departs from the value of the experiment – the ratio of colloid-to-bubble radius therein is ≈102 – but proved necessary to achieve a desired computational efficiency. In experiment,47 the curvature of the bubble is therefore lower than in our simulations, and the colloids near the interface thus interact with an almost flat surface. We will return to the consequences of this choice in our discussion.
The gel was prepared via an instantaneous deep quench from a purely repulsive potential to one with the aforementioned 20kBT attraction strength. We allowed the gel to form for 50τB, where τB = σ2/(4D) is the Brownian time of the colloids with single-particle translational diffusion coefficient D. During this time, the bubble was left unperturbed, in order to allow the system form the gel network and relax internal stresses. This resulted in a gel with an average contact number of 7.4 and void volume of 0.11σ3 in the bulk, i.e., away from the bubble surface, as measured using the methods of ref. 32,43,54. Fig. 2a shows a representative snapshot of the initial configuration. After preparation of the bubble-gel system, the bubbles, were made to oscillate for 50 cycles, which proved sufficient to obtain steady-states, with different values of the frequency ω ∈ [ωB, 105ωB] and the oscillation amplitude ΔR ∈ [σ, 5σ]; here we have defined a Brownian frequency ωB = (2π/τB). The oscillations were induced applying a sinusoidal perturbation on top of the equilibrium bubble pressure p(t) = p0(1 + δsin
ωt). All simulations were performed using HOOMD-blue, a GPU-compatible Python package developed in the Glotzer Lab.55
For the lowest applied frequencies, we even observe rupture of the gel network, as evidenced by a layer of colloids that have detached from the network, but are still bound to the bubble surface via the depletion interaction. Also note that some of the colloids have become detached from both the surface and the gel, and are freely floating in the ‘fluid-filled’ void between the bubble surface and the gel in Fig. 2b. The results presented in Fig. 2 suggest a connection between frequency of oscillation and local reordering of the colloidal gel close to the bubble. We quantified this using averaged local bond-order parameters.56 These are non-dimensional parameters that can be used to distinguish ordered structures from disordered ones. In particular, we choose q6 as indicator of reordering in the system, as it is the most significantly affected by the bubble oscillations.
Given the symmetry of the system, we made use of a radial average 〈q6〉r, i.e., we measured the quantity shell by shell. The effect is pronounced around those layers that are (in temporary) contact with the bubble, and we therefore focused on the first few intact particle shells, as measured from the center. Two representative results are shown in Fig. 3. Comparing the values before and after the oscillations, we choose to represent each configuration with a single 〈q6〉 value taken at distance r* and denoted henceforth by 〈q6〉r*. Here, r* is the value, at which the radial density function n(r) has its first peak and the radially averaged coordination number 〈z〉r* ≥ 6. The introduction of 〈q6〉r* will prove useful in constructing our state diagrams.
Appendix A provides the details of our procedure to arrive at 〈q6〉r*. In brief, we fitted each peak to n(r) using a Gaussian function to determine r*. For 〈q6〉r, we instead used a decaying exponential for disordered configurations (Fig. 2b), and a Gaussian function for ordered ones (Fig. 2c). We computed the standard error of the mean by summing uncertainties in the data and variances from the fitted functions, with the former being typically negligible compared to the latter.
Lastly, we quantified the length scale associated with the ordering in the system by fitting the peaks in 〈q6〉r (when present) together with the values in the bulk. We found that the extent of the crystal structures is roughly double the amplitude of oscillations, i.e., 2ΔR. The derivation of this typical length and the detail of the fits are provided in Appendix A.
![]() | ||
Fig. 4 Charting the effect of bubble radius R0 and oscillation amplitude ΔR on the ordering of the gel. The panels come in pairs (a) and (b), etc., and respectively show (left) the value of 6-fold, bond-order parameter in the first shell 〈q6〉r* and (right) the absolute error therein. From top to bottom the angular frequencies of the bubble oscillations are ω = 101ωB, 103ωB, and 105ωB, respectively. The points where we obtained our data, are indicated using (black) dots. A smooth interpolation (color map) was created using a bicubic scheme,57 in which new grid-points with associated function values are iteratively computed from four neighbouring points. The thin white curves provide iso-value contours. Data points marked with a red cross are excluded from our analysis because they belong to regions that are biased by the bubble tessellation, as explained in the main text. The cyan points represent configurations that are analysed in Fig. 5. |
The data in Fig. 4 allows us to conclude that ordering is triggered only for sufficiently large bubbles (R0 ≥ 20σ). Additionally, inducing local order in the gel is only possible, when the bubble can sufficiently expand and contract the surrounding gel. As there are no prescribed long-ranged interactions in our simulations (no hydrodynamic flows), compression in the gel is entirely dictated by the oscillation amplitude and mechanical propagation. We find that ordered structures can only emerge for ΔR ≳ 3σ, i.e., amplitude plays a minor role.
Here, we should note that there are small areas in Fig. 4 corresponding to small R0/σ, yet large ΔR/σ, that appear not to be affected by the bubble motion. This is an artifact of our bubble model: the surface discretization becomes comparable to the colloid–colloid separation. This gives rise to an effective egg-carton-like potential (for large values of ΔR/R0) that induces preferential colloid positions at the interface, which would not be present for a molecular interface. This effective bubble-colloid interaction interferes with structuring.
Avoiding these artifacts, we realize that R0/σ ratio determines the geometry of the collision between the gel network and the expanding bubble. For R0 ≫ σ, the network experiences an interaction with an almost flat surface. This favors the alignment of the colloids in the gel, promoting the formation of ordered structures.
To understand the role of ω, we make an analogy to the frequency response of a colloidal gel under oscillatory shear.58 Using a Kramer's argument, the authors of ref. 58 estimated the effect of shear on the probability for a particle to escape from the attractive potential of its neighbor. Considering the typical escape time as a function of the shear frequency, they concluded that there is a critical threshold, above which the particles can rearrange (to form crystalline structures).
Motivated by this, we contrast the period of oscillation with two times scales in our system: the thermal diffusion time and a network-extraction time, respectively. The former is τB ≥ 2πω−1 in all our simulations (ω ≥ ωB in Fig. 5) and we therefore deem it irrelevant. For the latter, we obtain the dimensionfree combination
![]() | (3) |
![]() | (4) |
We first turn to the regime in which there is no constructive reordering (α ≥ 1; ω ≲ 102ωB), see Fig. 5. Here, the bubble shrinks sufficiently slowly to allow colloids to be extracted from the gel for each contractive part of the oscillation cycle. The consequence is that branches of the gel network near the bubble surface are continuously ripped apart and reformed. This impedes the formation of crystalline layers. For the lowest frequencies applied in our simulations, we even observed the formation of a monolayer of colloids attached to the bubble surface. In our modeling they are attached via depletion, but in experiment wetting could play a strong role as well.
For moderate and high frequencies (α < 1; ω ≳ 102ωB), the bubble moved too fast to extract particles from the surrounding gel. As a result, the colloids in the network only experience a force pointing away from the bubble surface, which slowly pushes the surrounding gel outward. This ultimately leads to the formation of a zone wherein the gel is locally compressed; the gel further away from the bubble surface resists the radial expansion. The combined effect of local compression and oscillatory perturbations allows the colloids to overcome their kinetic barriers and rearrange into a (locally) crystalline structure. We conclude that α is a meaningful parameter and that structuring is predominantly controlled by the bubble's inability to extract colloids from the network, as this interferes with the process of crystallization.
Despite our ability to observe local structure formation, there remains a qualitative mismatch between simulation and experiment. In the latter, ordering was observed over a radial range that significantly exceeded the amplitude of oscillation. Additionally, in our simulations we observe the formation of a pocket of solvent around the oscillating bubble. In experiment, a solvent pocket was only found as a consequence of bubble dissolution; a process that we do not model. Lastly, in our simulation there is a colloid density heterogeneity following bubble oscillation, which appears absent in the experiment.
We consider it possible that the missing ingredient to have long-ranged structuring without density heterogeneities, is fluid flow. The porous-medium flow produced by the oscillating bubble, has the potential to influence particles that are far away from the surface. Provided a sufficiently large shear-Péclet number can be achieved,58 bond-breaking rearrangements can then be made further out from the bubble. Alternatively, the time-varying flows can serve to raise the effective temperature of the colloids in the gel network, thereby facilitating rearrangement. In either scenario, the reduced need to push the colloids, could help reduce density heterogeneities, while still increasing the local order.
Including porous medium flow in simulation could allow crystal structures to emerge at distances greater than we predict in our Brownian-dynamics study. Additionally, this flow would also allow colloids to be dragged back and forth during the oscillations, potentially avoiding the creation of strong density gradient around the bubble, as we observed in our study, but which appears not to be present in experiment. However, this is a hypothesis, which should be tested in simulation.
The main difficulty in performing such simulations is the presence of a (moving) gas–liquid interface. Accounting for complex interfaces with large differences in viscosity is a challenge in computational fluid dynamics.59 An approximate method to account for the interface would be to ignore the density and viscosity differences and use the presence of the tessellation points on the bubble surface to induce flows. This can, for instance, be done in the Rotne–Prager–Yamakawa (RPY) formalism via the HOOMD-blue plugin developed by Fiore et al.60 Such an approximation relies on the idea that the flows internal to the gel, rather than the presence of a gas–liquid interface control the physics of the rearrangement. The downside of this route is, however, that this is an uncontrolled approximation to the full hydrodynamic problem. That is, there is no means by which to readily refine it through the addition of higher-order terms.
Beyond these basic requirements, we find that the frequency of oscillation is the control parameter for creating order. The bubble's oscillatory dynamics compete with both thermal- and potential-energy based rearrangements in the system. Crystalline layers are formed only when the oscillations are fast enough not to break up clusters of colloids or extract colloids from the gel network. When there is no destructive rearrangement, the main effect of the oscillations is a slow compression of the surrounding gel network. Local reordering typically extends into the bulk of the gel for a range equal to the oscillation amplitude.
Lastly, the present work lays a solid foundation for understanding the impact of bubble oscillations on gel microstructure. To address the present mismatch between experiment and simulation, in terms of the range of the ordering effect, it would be interesting to consider simulations that properly account for hydrodynamic flow, though this poses a challenging prospect.
n(r) = ae−(r−r*)2/2b2 + n0, | (5) |
Turning to the peak value of the 6-fold bond-order parameter, 〈q6〉r*, we include only data points in the vicinity of r* in our fit of 〈q6〉r. We use either an exponential function, if the configuration considered does not show reordering (see Fig. 3a), or again a Gaussian function, in the case that crystalline structures are present in the system (see Fig. 3b):
![]() | (6) |
We obtained an estimate of the length scale over which the bubble oscillations modify the gel structure, by fitting 〈q6〉r for each ordered configuration (R0 ≥ 20σ, ΔR ≥ 3σ), combining linear and exponential functions:
〈q6〉r = a(r − κ)e−ξr + d. | (7) |
The inset shows the dependency of λ on ΔR. A linear fit of the obtained values provides us with λ(ΔR) = βΔR + ν, where ν = 1.2 ± 0.3 and β = 2.07 ± 0.07. Here, β indicates that when ΔR layers of colloids are crystallized, the next ΔR layers in the gel have reduced ordering, before saturating to the bulk structure. The value of ν indicates that reordering of a single radius of colloids is to be expected, even without oscillations.
![]() | (8) |
![]() | (9) |
We want to compare the amplitudes of these velocities for t ∈ [P/4,P/2], which is the interval of time in which the bubble performs a contraction. When the colloid velocity, induced by the depletion forces, is greater than the rate at which the bubble shrinks, then the latter can move the colloid from its original configuration. The condition required is:
![]() | (10) |
![]() | (11) |
Footnote |
† This can be straightforwardly computed from the overlap between a sphere and a wall in the Asakura–Oosawa formalism. We verified that attractions between the bubble and colloids do not play a role in the high-frequency restructuring regime. |
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