Muhammad Aetizaza,
Faizan Ullaha,
Sehrish Sarfaraza,
Tariq Mahmoodb and
Khurshid Ayub*a
aDepartment of Chemistry, COMSATS University, Abbottabad Campus, KPK 22060, Pakistan. E-mail: khurshid@cuiatd.edu.pk; Tel: +92-992-383591
bDepartment of Chemistry, College of Science, University of Bahrain, 1051, Bahrain
First published on 5th October 2023
Formaldehyde, a volatile organic compound (VOC) released by building and decoration materials, has many applications in the chemical feedstock industry. Excessive release of formaldehyde can cause serious health issues, such as chest tightness, cough, cancer, and tissue damage. Therefore, detection of formaldehyde is required. Herein transition metal (Fe, Ni, and Pd) doped olympicene is evaluated as a gas sensor for the detection of formaldehyde. The performance of the designed electrochemical sensor is evaluated through interaction energy, natural bond orbital (NBO) non-covalent interaction (NCI), electron density differences (EDD), electrostatic potential (ESP), quantum theory of atom in molecule (QTAIM), frontier molecular orbital (FMO), and density of states (DOS) analysis. Interaction energies obtained at B3LYP-D3/def-2 TZVP level of theory shows that formaldehyde is physiosorbed over the surface of transition metal doped olympicene. The trend for interaction energy is OLY(Ni)/HCHO > OLY(Fe)/HCHO > OLY(Pd)/HCHO. The presence of non-covalent interactions is confirmed by the QTAIM and NCI analyses, while transfer of charges is confirmed by natural bond orbital analysis. The reduced density gradient (RDG) approach using noncovalent interaction (NCI) analysis demonstrates that electrostatic hydrogen bonding interactions prevail in the complexes. Recovery time is calculated to check the reusability of the sensor. This study may provide a deep insight for the designing of highly efficient electrochemical sensor against formaldehyde with transition metals doped on olympicene.
Therefore, adsorption and sensor studies of formaldehyde have attracted much attention. In recent years scientists have developed many methods for the sensing of formaldehyde. These mechanisms includes chemical adsorption,11 catalytic oxidation,12 physical adsorption,12 and biotechnical decomposition.13 By using metal oxides, thermal catalytic oxidation have been performed for sensing of formaldehyde.14,15 Dirksen et al. studied the sensing of formaldehyde by using NiO thin films.16 Two-dimensional WO3 nanolayers were also explored theoretically as promising candidates for sensing applications especially for HCHO and showing even better performance than graphene and borophene.17 Moreover, metal doped complexes have been used as a sensor. For example, aluminum doped zinc oxide has been employed as a formaldehyde sensor with wide range of sensing ability and of rapid response (8 s) at certain temperature.18 With all these different types of solid materials have been used explored for sensing applications such as activated carbon, covalent organic framework, graphene, zeolites and metal organic framework.19,20 These developed mechanisms were not too efficient due to low surface area of adsorbents that are not good enough to adsorb these gases.21 The other most important drawback of using these adsorbents are that they produce harmful byproducts that are extremely dangerous materials.14
Two dimensional (2D) nanomaterials such as covalent organic frameworks (COFs),22 carbon nitrides (C2N),23 graphene oxide (GO),24 and metal–organic frameworks (MOFs)25 have been extensively used as a sensors because of their large surface to volume ratio consisting of unique electronic properties with extraordinary chemical and physical properties.26 These materials have been used in many potential applications in optoelectronic, catalysts, energy generation and in storage devices.27 It is also known that graphene and silicene are employed as electrode materials28 or electrode additives29 for applications in batteries. There are many reported mechanisms to improve the catalytic and sensing performance of 2D nanomaterials, such as doping of transition metals and their functionalization.30,31 Also, these materials have been used as gas sensors. Like, Ma et al. reported the sensitivity of small gas molecules such as NO2, CO, O2, and NH3 by palladium doped graphene.32 It is reported that sensing ability of single walled carbon nanotube could be enhanced by doping of palladium on the SWCNT surface towards CH4, CH3OH and SO2.33 The graphene doped with 3d transition metals has been widely studied for sensing applications.34–36 To increase the sensing abilities of graphene, Ti metal is doped on the surface of graphene for the sensing of COCl2,37 NO2,34 CO,35,38 and HCHO.39
In this study we have studied 2D surface, olympicene (C19H12) as an effective gas sensor for formaldehyde through density functional theory (DFT). Olympicene has various applications in the field of sensors, high-tech LED's, solar cells and energy storage, sensors devices.40 Olympicene has been previously investigated as a promising sensor for the detection of chemical warfare agents and toxic industrial gases.41,42 The geometry of olympicene is composed of five rings out of which four are benzene rings connected like an Olympic ring with two hydrogen atoms extended above and below plane of carbon.43 Many transition metals such as Ni, Fe and Pd are doped on olympicene to enhance the performance, as a sensor for the detection of formaldehyde. Olympicene commonly originated from pentacene has been recently reported in its stable form.40,44 From structural properties it is concluded that olympicene can be extensively used in solar cells, LEDs, energy storage devices and in sensor applications.40,45 In this theoretical study, sensing behavior of transition metal doped olympicene has been studied. Results concluded that TM doped olympicene is excellent adsorbent against formaldehyde. NBO, NCI, QTAIM, EDD analysis has been performed. All stable geometries have been calculated at B3LYP D3 def-2 TZVP level of theory. Also changes in the states have been observed by DOS analysis. To determine the reusability of the olympicene surface recovery time at different temperature are also calculated.
ΔEint = Ecomplex − (Eanalyte + ETM@OLY) | (1) |
ΔEint, CP = ΔEint − EBSSE | (2) |
To evaluate the interaction between TM and olympicene, and between formaldehyde and TM@olympicene, non-covalent interaction analysis is performed with VMD and Multiwfn.53 Electron density (ρ) and reduced density gradient (RDG) are used with the following equation.
(3) |
The final output files of all the complexes are further evaluated to study non-covalent interactions through NCI and QTAIM analyses via Multiwfn software.53 However their iso-surfaces are visualized through VMD.54
Fig. 1 (A) Optimized geometry of olympicene with individual bond length between carbon (B) different adsorption sites (purple color presents carbon atoms while sky blue is for hydrogen atoms). |
Different transition metals are doped on the surface of olympicene. Olympicene surface consists of five benzene rings. These rings provide three different adsorption sites on the top of these rings such as site A, site B, and site C (Fig. 1). Among all, adsorption of metal on site C produces the most stable structure. Basically, five possible bond lengths of olympicene are reported (Fig. 1) which are 1.35 Å (C1–C2), 1.41 Å (C2–C3), 1.40 Å (C3–C4), 1.43 Å (C4–C5), and 1.42 Å (C6–C1). The bonds at the edges where bonded carbons atoms are directly attached with one H-atom show bonds length of 1.35 Å, which is almost comparable to the theoretical ethylenic C–C bond length (1.34 Å) due to structural similarity with ethylene.55 Similarly, the C–C bond lengths in the interior of olympicene vary from 1.40 Å to 1.43 Å, which is strongly correlated with the reported C–C bond length for graphene (1.42 Å).56
Transition metals are checked for stability by optimizing them at different possible spin states such as singlet, triplet, quintet, and septet. The calculated data revealed that Ni is the most stable at triplet spin state, whereas Fe shows stability in quintet state and the most stable spin state for Pd is singlet state. By doping, a little deformation in the geometry of olympicene is observed due to larger difference in atomic radius between transition metals and carbon atom. From different orientations, different interaction energies of Pd@OLY, Ni@OLY, and Fe@OLY are −27.19 kcal mol−1, −11.62 kcal mol−1, −30.08 kcal mol−1 are obtained. Moreover, zero-point energy corrections and basis set superposition error (BSSE) energies are also computed for the considered Pd@OLY, Ni@OLY, and Fe@OLY systems. These all values are reported in Table S1 (ESI).†
The average distance between TM and surface is observed between 2.50 Å to 3.29 Å. Larger distance is observed in the case of iron which is 3.35 Å. While the shortest distance is observed in the case of Pd, that is 2.50 Å. The bond distances and stable complexes of TM@olympicene are reported in Fig. S1 (ESI).† And values of interaction energies and closest interaction distances between interacting atoms are reported in Table S1 (ESI).†
The most stable complexes of transition metal doped surfaces are next evaluated as sensor for formaldehyde. Different orientations are tested with different strong repulsions states, and the most stable orientation with most stable spin state such as triplet (OLY(Ni)/HCHO), quintet (OLY(Fe)/HCHO), and singlet (OLY(Pd)/HCHO) are studied for further analysis. These stable complexes are shown in Fig. 2 and their interaction energies are reported in Table 1. Interaction energies of OLY(Ni)HCHO, OLY(Fe)HCHO, and OLY(Pd)HCHO are −32.35 kcal mol−1, −15.98 kcal mol−1 and −11.13 kcal mol−1 respectively. The highest interaction energy is obtained in the case of OLY(Ni)HCHO that is −32.35 kcal mol−1. This highest energy is due to strong forces and efficient overlapping of orbitals of formaldehyde with TM@olympicene. Also, another factor that contributes to their strong interaction is short interaction distance i.e., 1.83 Å between formaldehyde and transition metal. After interaction with formaldehyde, interaction distance decreases from 2.68 Å to 2.14 Å (OLY(Ni)/HCHO), and 3.19 Å to 2.91 Å (OLY(Fe)/HCHO). But in case of OLY(Pd)/HCHO, this distance increases by a negligible value i.e., 2.50 Å to 2.54 Å. In general trend, shorter interaction distance indicates higher interaction energy. Therefore, in case of OLY(Ni)/HCHO, the highest interaction energy is strongly correlated with the shortest interaction distance. This trend is consistent with all the stable complexes that are reported. The overall trend of interaction energy is OLY(Ni)/HCHO > OLY(Fe)/HCHO > OLY(Pd)/HCHO. This generally supports physisorption.23,57,58
Complexes | Interaction energy (Ein) (kcal mol−1) | BSSE corrected energy (kcal mol−1) | BSSE correction energy (kcal mol−1) | Dint of TM and FMH | Dint of TM and OLY |
---|---|---|---|---|---|
OLY(Ni)/HCHO | −32.59 | −31.67 | 0.93 | 1.83 | 2.14 |
OLY(Fe)/HCHO | −15.98 | −15.39 | 0.59 | 2.44 | 2.91 |
OLY(Pd)/HCHO | −11.13 | −10.41 | 0.72 | 2.55 | 2.54 |
OLY(Ti)/HCHO | −48.72 | −47.83 | 0.89 | — | — |
Additionally, basis set superposition error (BSSE) corrected energies as well as BSSE correction energies are also computed for the considered systems (OLY(Ni)/HCHO, OLY(Fe)/HCHO and OLY(Pd)/HCHO). The results in Table 1 indicates that BSSE corrected energies follow the same trend as in the case of interaction energy i.e., OLY(Ni)/HCHO > OLY(Fe)/HCHO > OLY(Pd)/HCHO. The highest interaction energy observed for OLY(Ni)/HCHO complex is strongly correlated with the highest BSSE corrected energy. The calculated BSSE correction energies also justify the correlation of interaction energies with the BSSE corrected energies for all studied complexes (OLY(Ni)/HCHO, OLY(Fe)/HCHO and OLY(Pd)/HCHO). Additionally, OLY(Ti)/HCHO complex is also considered for comparison. Higher interaction and BSSE corrected energies are observed in the case of OLY(Ni)/HCHO complex as compared to other studied complexes.
Complexes | B3LYP | wB97XD | QNBO (HCHO) | ||||
---|---|---|---|---|---|---|---|
EHOMO (eV) | ELUMO (eV) | EH–L gap (eV) | EHOMO (eV) | ELUMO (eV) | EH–L gap (eV) | ||
OLY | −5.51 | −1.49 | 4.01 | −7.52 | 0.30 | 7.82 | — |
Pd@OLY | −4.81 | −1.81 | 2.99 | −7.02 | 0.23 | 7.25 | — |
Ni@OLY | −3.88 | −1.74 | 2.14 | −5.53 | −0.02 | 5.51 | — |
Fe@OLY | −4.62 | −1.70 | 2.90 | −6.74 | 0.04 | 6.79 | — |
OLY(Ni)/HCHO | −3.05 | −1.89 | 1.16 | −4.58 | −0.40 | 4.18 | 0.104 |
OLY(Fe)/HCHO | −4.16 | −1.63 | 2.54 | −5.91 | 0.14 | 6.05 | −0.225 |
OLY(Pd)/HCHO | −4.59 | −1.67 | 2.91 | −6.77 | 0.18 | 6.95 | 0.016 |
The energies of HOMO and LUMO of bare olympicene are −5.51 eV and −1.49 eV, respectively and their corresponding energy gap is 4.01 eV. On adsorption of transition metals on the surface, a reduction in the gap is observed. The energy gaps are 2.14 eV (Ni@OLY), 2.90 eV (Fe@OLY), and 2.99 eV (Pd@OLY). From results is concluded that the highest reduction is observed in the case of Ni@OLY. As we know that, conductivity of the sensor is increased when the band gap is reduced.60
After interaction of formaldehyde with transition metal doped olympicene a clear reduction in the EH-L is observed. EH-L gaps are reduced to 1.16 eV (OLY(Ni)/HCHO), 2.54 eV (OLY(Fe)/HCHO), and 2.91 eV (OLY(Pd)/HCHO) from 2.14 eV (Ni@OLY), 2.90 eV (Fe@OLY), and 2.99 eV (Pd@OLY). Among all complexes, the highest reduction in the band gap is observed in the case of OLY(Ni)/HCHO. It is well known that greater band gap reduction results in more conductivity.60 Based on FMO results, the highest conductivity is observed in case of Ni doped complex among all studied complexes.
To understand the interaction mechanism, it is important to observe the orbital densities of TM@olympicene and TM@olympicene with formaldehyde. Both HOMO and LUMO iso-surfaces of olympicene are evenly distributed over all the surfaces. But in case of transition metal doped olympicene, the density is shifted towards transition metals. However, in all three complexes the density of both HOMO and LUMO is slightly different. In OLY(Fe)/HCHO density is shifted to the surface while, in case of OLY(Ni)/HCHO density of HOMO is totally shifted towards formaldehyde, the third case OLY(Pd)/HCHO is also exactly like OLY(Ni)/HCHO. So, results concluded that the electrons are transferred from surface to analyte due to which a clear decrease in the band gap is observed which results in higher interaction between surface and analyte.
All transition metals have positive charge except Fe after interaction with olympicene, which indicates that charges are being transferred from transition metals to olympicene. It is also observed that density is shifted from transition metal to formaldehyde and concluded that both surface and transition metals transfer electron to the analyte. These results are also consistent with the NBO analysis (Table 2).
Moreover, in addition to B3LYP D3 Def-2 TZVP level of theory, electronic properties of the studied systems are also computed at wB97XD-D3 Def-2 TZVP level of theory (see Table 2). The values of HOMO, LUMO and energy gaps vary depending on used functional. However, the trend of energy gaps upon metal adsorption as well as upon complexation with formaldehyde is same with that of B3LYP. In both cases, the highest reduction in energy gap upon metal adsorption is seen for Ni@OLY. Similarly, for interaction of formaldehyde the highest reduction in energy gap is also noticed for OLY(Ni)/HCHO complex.
From spectra, it is concluded that the EHOMO and ELUMO of bare olympicene are −5.51 eV and −1.49 eV respectively, whereas their band gap appears at 4.01 eV. On interaction of olympicene with the TM a certain reduction in the band gap is observed i.e., it is shifted from 4.01 eV to 2.99 eV (Pd@OLY), 2.14 eV (Ni@OLY), and 2.90 eV (Fe@OLY). Now, on interaction of TM@OLY to the formaldehyde, this energy gap is further reduced. For example, energy gap is reduced from 2.14 eV to 1.16 eV in case of OLY(Ni)/HCHO, 2.90 eV to 2.54 eV (OLY(Fe)/HCHO), and 2.99 eV to 2.91 eV in (OLY(Pd)/HCHO). On formation of these virtualized energy levels on interaction with formaldehyde results in the reduction of energy gap, which in return increase the conductivity of the sensor. Hence, DOS spectrum clearly indicates the reduction of energy gap with the interaction of TM@OLY with the formaldehyde.
NBO charge analysis is performed to study the charge transfer between surface and analyte. Charge transfer values in the case of OLY(Pd)/HCHO and OLY(Ni)/HCHO are positive, 0.016 and 0.104 respectively. This indicates that charges are being transferred from analyte to the surface. While for OLY(Fe)/HCHO, the results are totally different. The value obtained is negative (−0.225) which shows the charge transfer from surface to analyte. In the case of OLY(Ni)/HCHO the amount of charge transfer is highest so as the interaction energy is highest for this complex. Also, in case of OLY(Pd)/HCHO charge is transferred to the olympicene because of presence of electron rich oxygen atom on formaldehyde. NBO charges are reported in Table 2.
To visualize the charge transfer EDD analysis is performed. The Iso-surfaces of all stable complexes OLY(TM)HCHO are shown in Fig. 3. Iso-surface shows two different colors red and blue. Blue color show accumulation of charges, this accumulation is mainly due to the presence of highly electron rich benzene rings of olympicene. While depletion of electronic density is mainly shown by red color density. The presence of two different types of colors confirms the charge transfer between surface and analyte. Electron density difference in the case of OLY(Pd)/HCHO clearly indicates that electron is being transferred from TM@olympicene to the formaldehyde. While for OLY(Fe)/HCHO and OLY(Ni)/HCHO all density is shifted towards olympicene. These all results are consistent with the results of NBO analysis.
Green patches appear between analyte and the olympicene in case of OLY(Fe)/HCHO and OLY(Pd)/HCHO. This is the confirmation of presence of weak forces between surface and analyte. While, in these two complexes red patches also appear between surface and analyte, and between the benzene rings of olympicene. This shows that steric repulsion also presents between surface and analyte and between the rings of the surface. In case of OLY(Ni)/HCHO, intensity of patches between surface and analyte is very less, which is the indication of presence of weak dispersive forces, but here blue patches indicate the confirmation of strong hydrogen bonded forces (see Fig. 4).
The 2D NCI graph is plotted between sign(λ2) ρ (a.u.) on x-axis while on y-axis reduced density gradient (RDG) is plotted. Here three different colors red, green, and blue also represent repulsive interactions, weak van der Waals forces, and strong hydrogen bonding, respectively. Sign(λ2) (more negative) on x-axis shown the strong forces such as electrostatic interaction and hydrogen bonding. Between 0.00 au, and −0.01 au, indicates the presence of strong electrostatic interaction. 2D NCI graphs shown that red and green spikes represent strong electrostatic interaction between surface and analyte. Intensity of green spikes in OLY(Fe)/HCHO show weak van der Waals forces as compared to other two complexes. The 3D isosurfaces shown in Fig. 4 reveal that the presence of mixture of red and blue spikes in the case of OLY(Ni)/HCHO and OLY(Pd)/HCHO between metal and olympicene surface, which shows steric repulsions and hydrogen bonding, respectively. Similarly, in the case of OLY(Fe)/HCHO, these isosurfaces appear at the interacting site of Fe and HCHO. These results are also justified from the red spikes appearing in the 2D RDG spectra (see Fig. 4). These results are consistent with interaction energy analysis.
(4) |
H(r) = G(r) + V(r) | (5) |
From values of Laplacian of electron density, it is seen that for HCHO/(Ni)OLY and HCHO/(Pd)OLY complexes, high values of 0.666 and 0.108 a.u. are observed, respectively. Also remaining BCPs are in accordance with the Laplacian value. Which is the clear indication to the presence of non-covalent interactions. Moreover, it is further observed that the value of electron density is less than 0.1 (ρ < 0.1), which is the clear indication of the presence of van der Waals interactions. As all the values of electron densities and Laplacian electron densities are positive in all cases of HCHO/(TM)OLY complexes, these all-positive values indicate the presence of non-covalent interaction, which are in accordance with the NCI analysis performed. Apart from this discussion the nature of interactions is also indicated by the ratio −V/G. If −V/G is less than zero, then it means that non-covalent interactions are present. In all complexes at one point between transition metal and formaldehyde the value of −V/G is greater than zero, which means that covalent interaction is present between formaldehyde and transition metal. While at other point between formaldehyde and olympicene this value decreased down to less than zero which confirms the non-covalent interactions.
(6) |
Footnote |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d3ra04019d |
This journal is © The Royal Society of Chemistry 2023 |