Dominika Ciurkoa,
Alif Chebbib,
Mateusz Kruszelnickic,
Hanna Czapor-Irzabekd,
Aneta K. Urbaneke,
Izabela Polowczyk
c,
Andrea Franzettif and
Tomasz Janek
*a
aDepartment of Biotechnology and Food Microbiology, Wrocław University of Environmental and Life Sciences, 51-630, Wrocław, Poland. E-mail: tomasz.janek@upwr.edu.pl; Tel: +48-71-320-7734
bDepartment of Science, Roma Tre University, 00146, Rome, Italy
cDepartment of Process Engineering and Technology of Polymers and Carbon Materials, Wroclaw University of Science and Technology, 50-370, Wrocław, Poland
dLaboratory of Elemental Analysis and Structural Research, Wroclaw Medical University, 50-556, Wroclaw, Poland
eFaculty of Biotechnology, University of Wroclaw, 50-383, Wroclaw, Poland
fDepartment of Earth and Environmental Sciences – DISAT, University of Milano-Bicocca, 20126, Milano, Italy
First published on 11th August 2023
Pseudomonas is a cosmopolitan genus of bacteria found in soil, water, organic matter, plants and animals and known for the production of glycolipid and lipopeptide biosurfactants. In this study bacteria (laboratory collection number 28E) isolated from soil collected in Spitsbergen were used for biosurfactant production. 16S rRNA sequencing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF) revealed that this isolate belongs to the species Pseudomonas antarctica. In the present study, crude glycerol, a raw material obtained from several industrial processes, was evaluated as a potential low-cost carbon source to reduce the costs of lipopeptide production. Among several tested glycerols, a waste product of stearin production, rich in nitrogen, iron and calcium, ensured optimal conditions for bacterial growth. Biosurfactant production was evidenced by a reduction of surface tension (ST) and an increase in the emulsification index (E24%). According to Fourier-transform infrared spectroscopy (FTIR) and electrospray ionization mass spectrometry (ESI-MS), the biosurfactant was identified as viscosin. The critical micelle concentration (CMC) of lipopeptide was determined to be 20 mg L−1. Interestingly, viscosin production has been reported previously for Pseudomonas viscosa, Pseudomonas fluorescens and Pseudomonas libanensis. To the best of our knowledge, this is the first report on viscosin production by a P. antarctica 28E. The results indicated the potential of crude glycerol as a low-cost substrate to produce a lipopeptide biosurfactant with promising tensioactive and emulsifying properties.
Numerous genera have been described for biosurfactant production, with Bacillus spp., Acinetobacter spp., Rhodococcus spp., Halomonas spp. and Candida spp. being the best-known biosurfactant producers, as well as Pseudomonas, described as a dominant genus involved in biosurfactant synthesis.6 Pseudomonas is a cosmopolitan microorganism found in miscellaneous habitats including soil, water, organic matter, plants and animals.7 Due to its metabolic complexity, Pseudomonas is capable of synthesizing both glycolipid and lipopeptide biosurfactants.8,9 Known for its higher rhamnolipid production, P. fluorescens is at the same time extensively studied for lipopeptide synthesis.10 Lipopeptide biosurfactants of Pseudomonas spp. are known to exhibit great diversity.11 Their differences are mainly manifested in the length and composition of the fatty acid tail as well as in the number, type, and configuration of the amino acids in the peptide chain.12 The complex group of Pseudomonas lipopeptides, originally represented by viscosin, amphisin, tolaasin and syringomycin, has been recently expanded by several newly identified compounds.13 Therefore, arthrofactin of Pseudomonas sp. strain MIS38, putisolvins produced by Pseudomonas putida, orfamide of P. fluorescens strain Pf-5 and pseudodesmins of an unidentified Pseudomonas isolate have recently become the objects of intense research.14 In fact, the extensively studied group of viscosins has so far included 17 characterized compounds, represented by viscosin, viscosinamide, WLIP (white line-inducing principle) pseudodesmin, massetolide and pseudophomins.15 These lipopeptides are composed of a peptide chain of nine amino acids, typically attached to 3-hydroxydecanoic acid (3-HDA).15 The structure is cyclized by the ester bound, which connects the C-terminus of the peptide chain with the alcohol function of the third threonine side chain. Viscosin-like lipopeptides are varied in terms of the hydrophobic amino acid located at positions 4 and 9, where Leu, Ile or Val may be present. In addition, the fatty acid tail may include from 10 to 12 carbon atoms.15,16 To date, viscosin production has been demonstrated for a limited number of Pseudomonas species. The first report of Groupé et al.17 described the isolation of the antibiotic compound, and its activity against pathogenic and saprophytic mycobacteria. The antibiotic was secreted in P. viscosa culture and therefore named viscosin. Later, Neu et al.18 determined the surface active properties of viscosin. Lipopeptide purified from P. fluorescens culture showed the ability to reduce ST to the value of 26.5 mN m−1. The critical micelle concentration (CMC) was determined to be 0.15 mg ml−1. Further research of Hildebrand et al.19 evidenced viscosin production in the culture of P. fluorescens (P/SH10-3B-A7B). Once again, the significant surface-active properties of viscosin were confirmed. Further, De Bruijn et al.20 documented the significant role of viscosin-like lipopeptide, extracted from P. fluorescens SBW25 culture medium, in motility and biofilm formation. Finally, efficient production of viscosin lipopeptide was documented for Pseudomonas libanensis M9-3, isolated as a result of a hydroponic greenhouse study.21
Given the dearth of knowledge regarding the lipopeptides' production by the Pseudomonas genus, this paper aims at describing, for the first time, the capability of a P. antarctica 28E strain to produce the lipopeptide biosurfactant viscosin. The purpose of this study was to evaluate the conversion of crude glycerol to viscosin using P. antarctica 28E. Additionally, the molecular structure and physicochemical properties (including CMC) and the wettability alteration (contact angle determination) of the produced lipopeptide were studied.
Identification of P. antarctica 28E by the MALDI TOF MS method was carried out in the Microbiological Laboratory in the Jagiellonian Center of Innovation in Cracow, using a MALDI-TOF Microflex LT mass spectrometer by Bruker (Bruker, USA). Sequences of 16S rRNA of P. antarctica 28E and results of MALDI-TOF study were then analyzed with the Basic Local Alignment Search Tool (BLAST) program, available on the National Center for Biotechnology Information (NCBI) website.
Initially, P. antarctica 28E was cultured in the mineral salt medium (MSM) supplemented with crude glycerols, to determine the optimal substrate for bacterial growth. Glycerols were applied at two concentrations, 2% (w/v) and 4% (w/v). MSM composed of (g L−1) NaNO3 (2), Na2HPO4 (0.9), MgSO4 × 7H2O (0.4), KH2PO4 (0.7), CaCl2 × 2H2O (0.1), FeSO4 × 7H2O (0.001) was adjusted to pH 7.4–7.6 using 5 M NaOH and sterilized. Crude glycerols used in this study were generated as a result of soap production process (glycerol Racibórz (G1) (Polish oil concern PKN ORLEN)), biodiesel production (glycerol Lotos (G2) (Grupa Lotos S.A., Poland), Trzebinia (G3) and Czechowice (G4) (Grupa Azoty S.A., Poland)) and stearin production (glycerol Chorzów (G5) (Grupa Lotos S.A., Poland)), described in detail in the work of Dobrowolski et al.23 and are listed in Table 1.
Symbol | G1 | G2 | G3 | G4 | G5 |
---|---|---|---|---|---|
Waste product derived from | Soap production | Biodiesel production | Biodiesel production | Biodiesel production | Stearin production |
Glycerol (%) | 80 | 50 | 87 | 80 | 42 |
Nitrogen (%) | 0.041 | 0.078 | 0.023 | 0.014 | 0.136 |
NaCl (%) | 7.59 | 3.04 | 0.20 | 5.47 | 1.23 |
Ash (%) | 8.76 | 3.62 | 0.93 | 6.34 | 1.35 |
Water (%) | 3.6 | 43.42 | 11.85 | 8.16 | 55.3 |
Na (g kg−1) | 31.63 ± 0.52 | 13.10 ± 0.52 | 0.44 ± 0.01 | 23.12 ± 0.76 | 5.22 ± 0.26 |
K (mg kg−1) | 231.32 ± 4.77 | 72.74 ± 8.98 | 4388.16 ± 174.37 | 65.89 ± 4.88 | 63.137 ± 6.31 |
Mg (mg kg−1) | 5.454 ± 0.44 | 15.26 ± 0.45 | 1.68 ± 0.17 | 22.55 ± 1.02 | 5.305 ± 1.06 |
Ca (mg kg−1) | 52.36 ± 10.93 | 97.06 ± 9.44 | 40.27 ± 6.65 | 132.21 ± 5.45 | 461.95 ± 46.19 |
Fe (mg kg−1) | 26.42 ± 1.20 | 2.31 ± 0.68 | 1.99 ± 0.17 | 5.91 ± 0.20 | 458.38 ± 45.84 |
Zn (mg kg−1) | 1.30 ± 0.40 | 1.13 ± 0.34 | 0.09 ± 0.02 | 1.41 ± 0.13 | 1.251 ± 0.25 |
Cu (mg kg−1) | 0.66 ± 0.08 | 0.12 ± 0.08 | 0.096 ± 0.04 | 0.39 ± 0.04 | 0.03 ± 0.01 |
Cl (mg kg−1) | 46![]() |
18![]() |
1200 ± 10.90 | 33![]() |
7400 ± 59.26 |
In addition, another glycerol-derived waste, previously characterized by Signori et al.,24 originating from industrial biodiesel production from palm oil (Milan (G7)) was included in this research. In addition, to estimate the suitability of crude glycerol as a potential substrate for biosurfactant synthesis, a process was additionally conducted using pure glycerol (G6) (99.5%) (Centro-Chem, Poland) as a control. The purity of crude glycerols was estimated using high-performance liquid chromatography (HPLC, UltiMate 3000, Dionex-Thermo Fisher Scientific, London, UK) equipped with a HyperRez Carbohydrate H+ Column (Thermo Fisher Scientific, London, UK) and a refractive index (RI) detector (Shodex, Ogimachi, Japan). Trifluoroacetic acetic acid at the concentration 25 mM was applied as an elution agent. Elution was carried out with a flow rate of 0.6 mL min−1 at 65 °C.25
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In order to verify the wetting ability of the viscosin solutions, contact angle measurements were carried out using the OCA 15EC system (DataPhysics, Filderstadt, Germany), and the drop shape was analyzed with SCA20 software (DataPhysics). For each measurement, a sample droplet of 0.2 μL was placed on a solid support. Silicone, polystyrene and glass surfaces were used as supports. All measurements were made at ambient temperature (25 °C) in a saturated vapor atmosphere to reduce droplet evaporation. The contact angle value is reported as the average of ten measurements.
The OD600 of bacterial cells in MSM medium, supplemented with G5 glycerol, was the highest among all tested variants (Fig. 1). Inversely, in the culture growing on pure glycerol, the number of bacterial cells was the most limited. This has been noted for both the 2% (w/v) (Fig. 1A) and 4% (w/v) (Fig. 1B) glycerol cultures. This should be explained by the lack of nutrients essential for bacterial growth in the reagent glycerol composition. Therefore, deficits of nitrogen and trace elements showed a negative effect for culture development. In the cultures performed with G7 glycerol addition, the P. antarctica 28E growth curves presented an irregular shape, suggesting the inhibitory effect of the substrate on the microbial community. We did not observe a significant increase in bacteria concentration; therefore, G7 glycerol was not included in the curves of bacterial growth (data not published) and was not considered for the future stage of studies.
The composition of G5 glycerol, recognized as the best substrate for P. antarctica 28E growth, was distinguished by the highest nitrogen content (Table 1). In addition, G5 glycerol was characterized by high content of iron and calcium. While the positive effect of nitrogen on microbial metabolism is well known, participating in the synthesis of amino acids, DNA, RNA and ATP among other molecules, the impact of iron and calcium is not so well explored.29 The high concentration of iron and calcium in G5 glycerol significantly supported the growth of P. antarctica 28E. Calcium, in prokaryotes, is involved in a several metabolic processes such as maintenance of cell structure, motility, cell division, gene expression and cell differentiation processes such as sporulation, heterocyst formation and fruiting body development. Therefore it is essential for bacterial colony evolution.30 However, the direct effect of calcium on the growth of Pseudomonas bacteria has not been documented so far. Therefore, this is a first report showing beneficial effect of calcium on Pseudomonas bacteria growth. On the other hand, several studies have highlighted the positive effect of iron, observed in our research in relation to P. antarctica 28E, on the growth of the genus Pseudomonas. Iron, applied in three different forms, i.e. FeSO4, Fe(NO3)3 and FeCl3, at the concentration of 0.1 mM, significantly supports the growth and biosurfactant production of Pseudomonas citronellolis 620C.31 Moreover, among the tested iron sources, the FeCl3 supported the microbial growth to the greatest extent. The explanation is the highest solubility of FeCl3 in comparison to Fe(NO3)3 and FeSO4. Other studies evaluated the effect of different forms and concentrations of iron on the growth rate of three biosurfactant-producing species (P. citronellolis (isolate 22A), P. aeruginosa (isolate 312A) and P. aeruginosa (isolate 332C)) confirmed observed in our studies promoting effect of iron on Pseudomonas growth.32 Several iron forms (FeCl3, Fe(NO3)3, Fe–EDTA, FeSO4, Fe0) at the concentration of 0.1 mM showed a positive effect on bacterial growth, increasing the cell number. The exception was iron oxide (Fe2O3), of limited solubility, which did not differ from the control.32 Finally, Kim et al.33 searched for a nutrient affecting the growth of Pseudomonas syringae pv. tomato DC3000. After a series of experiments, iron supplementation was found to induce a strong positive response for bacterial growth what is in line with our studies. Bacteria presented a dose-dependent growth enhancement. The addition of 50 μM of Fe3+ caused an OD600 change of 0.35, while supplementation with 100 μM resulted in an increase of 0.74. Based on the research described above and on the result presented in this study, the crucial role of iron on the growth of Pseudomonas bacteria must be emphasized. The same as the concentration applied, the bioavailability for the microbial community is of decisive importance. The post-production glycerols applied in this research, in particular G5 glycerol, meet the nutritional requirements of P. antarctica 28E, providing appropriate conditions for bacterial growth.
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Fig. 2 Growth curves (OD600), surface tension (ST, mN m−1), and glycerol consumption (g L−1) by P. antarctica 28E grown in MSM medium supplemented with (A) 2% and (B) 4% of crude glycerol (G5). |
According to Moshtagh et al.34 the value of pH can affect microbial growth and reproduction significantly influencing the absorption of nutrients and activity of the enzymes engaged in several metabolic processes. In our studies, the pH of P. antarctica 28E culture growing in 2% (w/v) and 4% (w/v) concentration of glycerol was at a stable value of around 8 (data not shown) and it was applicable for the growth and biosurfactant synthesis of bacteria. However, numerous studies have shown that the optimal pH for biosurfactant production by Pseudomonas bacteria seems to be a species- or strain-dependent feature. As in our studies, the culture of Pseudomonas aeruginosa RS29 pH in a range of 7–8 ensured the most efficient biosurfactant production in the glycerol-based medium.35,36 Surprisingly, the production of biosurfactant in Pseudomonas aeruginosa TMN culture was the most efficient at pH 7 and a slight alkalization to pH 8 caused a dramatic change in the yield of biosurfactant production, reducing it greatly.37
Production of biosurfactant by P. antarctica 28E was indicated by the reduction of the surface tension (ST), both in 2% (w/v) and 4% (w/v) glycerol medium (Fig. 2). Significant ST reduction was observed in the early exponential phase of growth, indicating that P. antarctica 28E biosurfactant consists of primary metabolites, synthesized simultaneously with the formation of cellular biomass. Similar observations have been made while studying P. aeruginosa biosurfactant production.38 In P. antarctica 28E culture, a significant drop of the ST, from the initial value of 59 mN m−1 to 28 mN m−1 (Fig. 2A) and from 52 mN m−1 to 27 mN m−1 (Fig. 2B), respectively, in the 2% (w/v) and 4% (w/v) glycerol medium was observed. However, in the culture supplemented with 4% (w/v) glycerol, ST dropped significantly during 24 h and reached a stable value of approximately 27 mN m−1, while in the 2% (w/v) glycerol medium, after ST decline, a slight increase was observed. It indicated reduction of the biosurfactant concentration in the 2% (w/v) glycerol medium. The ST increase occurred after glycerol stores were depleted. Therefore, to provide the bacteria with nutrients, the already produced biosurfactants could possibly be hydrolyzed.
A variety of microorganisms of the genus Pseudomonas produce biosurfactants that are diverse in chemical composition. The nature and amount of the biosurfactant produced depends on the species of Pseudomonas and the various nutritional factors available for their growth (Table 2).
Biosurfactant type | Strain | By-products/carbon sources | Maximum yield of production (g L−1) | Reference |
---|---|---|---|---|
Glycolipids | ||||
Rhamnolipids | Pseudomonas aeruginosa E03-40 | Soybean oil/glycerol | 42.1 | 39 |
Rhamnolipids | Pseudomonas aeruginosa J4 | Glucose/kerosene/glycerol/olive oil/sunflower oil/grape seed oil | 3.6 | 40 |
Rhamnolipids | Pseudomonas aeruginosa EM1 | Glucose/glycerol/sucrose/hexane/olive oil/oleic acid/soybean oil | 12.3 | 41 |
Rhamnolipids | Pseudomonas aeruginosa RS6 | Waste glycerol | 2.73 | 42 |
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||||
Lipopeptides | ||||
Pseudofactin | Pseudomonas fluorescens BD5 | Glucose/glycerol | 1.19/0.01 | 43 and 44 |
Putisolvin | Pseudomonas putida PCL1445 | Glycerol | — | 45 |
Amphisin | Pseudomonas sp. DSS73 | Glucose | — | 46 |
Syringomycin | Pseudomonas syringae B3A-R | Glucose | — | 47 |
Viscosin | Pseudomonas libanensis M9-3 | Glucose | 0.15 | 48 |
Glycerol is a frequently chosen substrate in the research on biosurfactant production in the Pseudomonas genus, while most of these studies concern rhamnolipid synthesis.35,36 Biodiesel side stream waste glycerol was applied for biosurfactant production using Pseudomonas aeruginosa RS6. At optimal fermentation conditions, ST declined from 72.13 mN m−1 to 29.4–30.4 mN m−1; therefore biosurfactant activity was reported to be better than that of some chemical-based surfactants and similar to the activity observed in our studies.49 Corresponding to our research ST drop was observed in another study, where glycerol was applied as a substrate for anaerobic production of rhamnolipids. Three strains of P. aeruginosa (SG, L6-1 and FA1) reduced the ST at different substrate concentrations from 63 mN m−1 to about 32 mN m−1. In addition to glycerol, its intermediate, i.e. 1,2-propylene glycol, as well as crude glycerol supported P. aeruginosa strains to anaerobically produce rhamnolipids, reducing the surface tension of the culture to about 31 mN m−1 and below 35 mN m−1 respectively.50 Finally, in the research performed by Silva et al.51 rhamnolipid production in the 3% glycerol culture of P. aeruginosa UCP0992 resulted in an ST reduction to the value of 27.4 mN m−1 as it was observed in our study. Dubern and Bloemberg52 detected a similar ST drop, while describing production of putisolvin, the lipopeptide biosurfactant of Pseudomonas putida strain PCL1445. In the medium supplemented with 2% glycerol, ST decreased from 54 mN m−1 initially to 29 mN m−1, what is in line with our studies. Reduction of the ST observed in our research as well as described literature examples showed post-production glycerol as a suitable substrate for the production of Pseudomonas biosurfactant.
Biosurfactant production in the P. antarctica 28E culture affected emulsifying properties of the cultivation medium was indicated in addition by the growing E24%. In the medium supplemented with 2% as well as 4% glycerol, emulsification index (E24%) reached a maximum value of 33% (data not shown). However, obtained result was lower than that observed in the research of da Rosa et al.53 where in the optimal conditions for rhamnolipid production E24% reached the value of 61%. In another study, where the halophilic bacterium Pseudomonas stutzeri BK-AB12 was cultivated in medium containing 3% glycerol, an increase of E24% reach the higher value of 53.33%. Finally, the cell-free supernatant of P. aeruginosa JBK1 culture, cultivated in 3% biodiesel derived waste glycerol medium, exhibited stable emulsifying properties with all the hydrocarbons tested. The best E24% results; 62% obtained in relation to kerosene and xylene and 60% obtained using hexadecane38 were almost twice as high as in our research. Against the background of the presented results, the E24% of P. antarctica 28E culture supernatant is relatively low. According to Jain et al.54 high molecular weight biosurfactant acts as an emulsion stabilizer, while low molecular mass compounds are unable to create stable emulsions. This indicates the presence of the low molecular weight biosurfactant in P. antarctica 28E culture medium.
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Fig. 4 MS/MS spectra of pseudomolecular ion of viscosin at m/z 1148 (M + [Na+]) with the structure fragmentation. |
A similar spectrum of viscosin fragmentation was observed in the work of Laycock et al.,58 where protonated fragmentation ions at m/z 595, 496, 413 and 284 were detected. In our work, corresponding ions, which were sodium adducts (M + [Na+]) of m/z at 617, 518, 435 and 306, were noted. The MS/MS data presented in the work of Rokni-Zadeh et al.,59 where structural studies on the white line-inducing principle (WLIP) were performed, are in line with our results. WLIP is a cyclic lipopeptide with a molecular weight of 1125 Da composed of an N-terminal β-hydroxydecanoic acid and a peptide moiety of nine amino acids. It is structurally identical to viscosin except for the chirality of leucine in position 5 that it is D- in WLIP and L- in viscosin.60 MS/MS spectra of WLIP displayed signals at m/z 995.6, 908.6, 795.5, 595.4, 496.3, 413.3 and 284.2 (M + [H+]), corresponding to the fragmentation ions obtained in our studies. Finally, the MS/MS spectrum obtained in our research corresponded to the one published while studying antifungal activity of viscosin, secreted by frog skin bacteria.61 Therefore, lipopeptide biosurfactant obtained in our studies were identified as viscosin.
As the final stage of this study the CMC of viscosin was determined. The CMC reached 20 mg L−1 (Fig. 5), which is in line with other results, i.e. 15 mg L−1, 50 mg L−1 and 54 mg L−1, presented in the work of Hamley,62 Portet-Koltalo et al.63 and Saini et al.,21 respectively.
The viscosin biosurfactant was studied for any effect on changes in the contact angle on hydrophobic and hydrophilic surfaces. Silicone and polystyrene surfaces, which have high hydrophobicity, are used regularly in biomedical industries. The largest reduction in contact angle was observed on silicone (from 92° to 77°) and polystyrene (from 75° to 61°) at 0.02% (w/v) viscosin (Table 3).
Sample | Contact angle (°) | |||||||
---|---|---|---|---|---|---|---|---|
Viscosin concentration (mg L−1) | ||||||||
0 | 3 | 6 | 10 | 20 | 60 | 100 | 200 | |
Glass | 6 ± 1 | 6 ± 0 | 6 ± 1 | 6 ± 0 | 5 ± 0 | 5 ± 1 | 6 ± 0 | 5 ± 1 |
Polystyrene | 75 ± 1 | 73 ± 2 | 73 ± 1 | 70 ± 1 | 67 ± 2 | 66 ± 2 | 61 ± 2 | 61 ± 2 |
Silicone | 92 ± 2 | 89 ± 1 | 85 ± 2 | 82 ± 2 | 80 ± 1 | 80 ± 2 | 78 ± 2 | 77 ± 2 |
However, on a highly hydrophilic surface like glass, there was no significant reduction in contact angle values (from 6° to 5°) for 0.02% (w/v) viscosin solution (Table 3). For comparison, Al-Wahaibi et al.64 reported changes in the wettability of a hydrophobic surface from 59° to 29° by biosurfactant produced by B. subtilis B30. Al-Sulaimani et al.65 also reported that biosurfactant produced by B. subtilis W19 changed the contact angle of distilled water from 70.6° to 25.3° at 0.25% (w/v) biosurfactant. In conclusion, our results suggest that the viscosin changed the wettability of hydrophobic surface toward more water-wet, which is beneficial during enhanced oil recovery (EOR) applications.
This study provides the first evidence that viscosin can be produced using P. antarctica 28E in a culture medium containing crude glycerol. To reduce the costs of biosurfactant production, stearin-derived glycerol was used as a promising cheap and renewable carbon source. The properties of the biosurfactant obtained have potential application as a cleaning and emulsifying agent in the pharmaceutical and food industry and/or bioremediation of hydrocarbon-contaminated sites.
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