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Novel family of bis-pyrazole coordination complexes as potent antibacterial and antifungal agents

Youssef Draouia, Smaail Radi*a, Amine Tanana, Afaf Oulmidiab, Haralampos N. Mirasc, Redouane Benabbesd, Sabir Ouahhoudod, Samira Mamrid, Aurelian Rotarue and Yann Garcia*b
aLCAE, Department of Chemistry, Faculty of Science, University Mohamed I, P.O. Box 524, Oujda 60 000, Morocco. E-mail: s.radi@ump.ac.ma
bInstitute of Condensed Matter and Nanosciences, Molecular Chemistry, Materials and Catalysis (IMCN/MOST), Université Catholique de Louvain, Belgium. E-mail: yann.garcia@uclouvain.be; Fax: +32-10472330
cSchool of Chemistry, Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, UK
dLaboratory of Biochemistry and Biotechnology, Department of Biology, Faculty of Science, University Mohamed I, P.O. Box 524, Oujda 60 000, Morocco
eDepartment of Electrical Engineering and Computer Science & Research Center MANSiD, “Stefan Cel Mare” University, University Street, No. 13, Suceava 720229, Romania

Received 1st June 2022 , Accepted 7th June 2022

First published on 15th June 2022


Abstract

A new pyrazole ligand, N,N-bis(2(1′,5,5′-trimethyl-1H,1′H-[3,3′-bipyrazol]-1-yl)ethyl)propan-1-amine (L) was synthesized and characterized by 1H-NMR, 13C-NMR, FT-IR and HRMS. The coordination ability of the ligand has been employed for the construction of a new family of coordination complexes, namely: [Cu2LCl4] (1), [ML(CH3OH)(H2O)](ClO4)2 (MII = Ni (2), Co (3)) and [FeL(NCS)2] (4). The series of complexes were characterized using single-crystal X-ray diffraction, HRMS, FT-IR and UV-visible spectroscopy. Moreover, the iron(II) analogue was investigated by 57Fe Mössbauer spectroscopy and SQUID magnetometry. Single-crystal X-ray structures of the prepared complexes are debated within the framework of the cooperative effect of the hydrogen bonding network and counter anions on the supramolecular formations observed. Furthermore, within the context of biological activity surveys, these compounds were reviewed against different types of bacteria to validate their efficiency, including both Gram-positive as well as Gram-negative bacteria. Enhanced behaviour towards Fusarium oxysporum f. sp. albedinis fungi, were detected for 1 and 4.


1. Introduction

Nitrogen heterocyclic containing molecules play an important role in the recognized structural diversity observed in the coordination chemistry of these ligands with metal ions. More specifically, pyrazole-based ligands have proven their efficiency for the construction of coordination complexes with useful applications in several fields not only in catalysis,1 agricultural biotechnology,2 corrosion inhibition, antimicrobial activity3 and biology,4 but also in pharmaceutical and medical research,5 leading for instance to anti-inflammatory6,7 and anti-cancer agents.8

According to recent literature reports,9,10 the preparation of pyrazole based ligands with multiple coordination sites remains a challenging task. Such five-membered heterocyclic ligands associated with hydrogen bonding as well as π–π interactions can lead to interesting features, such as flexibility, ductility and chelation properties for the resulting coordination complexes.11 The construction of these complexes depends on the effect of hydrogen bonding,12 donor atoms,13 counter anions,14 solvent15 and the topologies of the selected ligand.16 In addition, such organic molecules were found to exhibit various properties, be pharmacological,17 chemosensory and photophysical,18 optical and morphological properties,19 to name but a few. Thus, coordination complexes formed with pyrazole building blocks may offer excellent compounds for the exploration of new functionalities and investigation of chemical and electronic behaviours. For example, a large number of pyrazole-based coordination complexes with cobalt and copper revealed interesting antioxidant activity.20 Moreover, pyrazole iron complexes, revealed remarkable electronic properties (e.g. spin crossover phenomena21,22) or catalytic selectivity (in the hydrosilylation of organocarbonyl substrates23). Additionally, relevant pyrazolate complexes of cadmium, nickel and mercury were found to act as efficient antimicrobial agents due to the induced disruption of the cell membrane's integrity in the case of Gram positive and Gram negative bacteria.24 Recent examples of iridium and platinum pyrazolate complexes demonstrated too highly promising activity in medical applications as in the case of anti-cancer agents.25,26

Inspired by the observed structural diversity and wide range of applications, our group developed new pyrazolate derivatives27,28 and investigated their efficiency in the coordination of transition metals. This research objective is actually the first step in the construction of environmentally friendly hybrid silica-based materials for extraction of transition metals and purification of industrial waste water.29,30

In this work, we discuss the preparation and characterisation of a new highly flexible pyrazole ligand N,N-bis(2(1′,5,5′-trimethyl-1H,1′H-[3,3′-bipyrazol]-1-yl)ethyl)propan-1-amine (L) which exhibits multiple coordination sites due to the presence of four pyrazolate rings. It was characterised by 1H NMR, 13C NMR, infra-red spectroscopy, and high-resolution mass spectrometry. Moreover, the ligand was used for the synthesis of four new coordination complexes (Scheme 1), namely: [Cu2LCl4] (1), [ML(CH3OH)(H2O)] (MII = Ni (2), Co (3)) and [FeL(NCS)2] (4). The complexes were characterised by single crystal X-ray diffraction, elemental analysis, FT-IR and UV-visible spectroscopy. Additionally, the electronic structure of the iron pyrazolate adduct was investigated further using 57Fe Mössbauer spectroscopy and SQUID magnetometry. The antibacterial properties of L and 1–4 were investigated against Staphylococcus aureus and Streptococcus spp as Gram-positive specimens also Escherichia coli and Klebsiella spp. as Gram-negative specimens. Their antifungal performance versus Fusarium oxysporum f.sp. albedinis fungi was also reviewed.


image file: d2ra03414j-s1.tif
Scheme 1 Synthesis of bis-pyrazole coordination complexes 1–4.

2. Experimental section

2.1. Materials and instrumentation

All solvents and chemicals, obtained from usual commercial sources, were of analytical grade and used without further purification. 1H and 13C NMR spectra were obtained from a Bruker AC 300 spectrometer. High resolution mass spectrometry HRMS data were obtained with a Q Exactive Thermofisher Scientific ion trap spectrometer by using ESI ionization. FT-IR spectra were recorded on potassium bromide discs using a PerkinElmer 1310 spectrometer. UV-visible spectra were recorder using a Shimadzu 3600 plus spectrometer equipped with Harrick praying mantis modulus which allows direct analysis of powders in reflectance mode. Melting points were measured using a Koffler bench. Magnetic susceptibilities were measured on a Quantum design MPMS3 SQUID magnetometer. Magnetic data were corrected for the sample holder and diamagnetic contributions. A polycrystalline sample of 4 was quickly loaded into a gelatine capsule and immediately inserted within the SQUID cavity to avoid any air oxidation. 57Fe Mössbauer spectra were recorded in transmission geometry with a constant acceleration mode conventional spectrometer equipped with a 50 mCi 57Co(Rh) source and a Reuter Stokes proportional counter. The powdered sample was sealed in plastic sample holder and a spectrum was recorded at 298 K. The spectrum was fitted using Recoil 1.0 Mössbauer analysis software31). The isomer shift values are given with respect to α-Fe at room temperature.

2.2. X-ray crystallography

Suitable single crystals were selected and mounted onto a rubber loop using Fomblin oil. Single-crystal X-ray diffraction data of 1–4 were recorded on a Bruker Apex CCD diffractometer (λ (Mo Kα) = 0.71073 Å) at 150 K equipped with a graphite monochromator. Structure solution and refinement were carried out with SHELXS-97[thin space (1/6-em)]32 and SHELXL-97[thin space (1/6-em)]33 using the WinGX software package.34 Data collection and reduction were performed using the Apex2 software package. Corrections for incident and diffracted beam absorption effects were applied using empirical absorption corrections.35 All the atoms and most of the carbon atoms were refined anisotropically. Solvent molecule sites were found and included in the refinement of the structures. Final unit cell data and refinement statistics for 1–4 are collected in Table S1. Crystallographic data for compounds 1–4 (CCDC 1: 2154263, 2: 2154264, 3: 2154265 and 4: 2154266).

2.3. Synthesis section

The pyrazole derivatives from A1 to A6 were prepared and characterized according to our previous procedure.36
2.3.1. Synthesis of N,N-bis(2-(1′,5,5′-trimethyl-1H,1′H-[3,3′-bipyrazol]-1-yl)ethyl) propan-1-amine (L). To a solution of 2-(1′,5,5′-trimethyl-1H,1′H-[3,3′-bipyrazol]-1-yl)ethan-1-ol (A6) (4 g, 18.1 mmol, 1 equiv.) in dichloromethane (80 mL), p-toluenesulfonyl chloride (4.15 g, 21.8 mmol, 1.2 equiv.) was added and the mixture was cooled to 0 °C. To the above solution, NaOH (1.45 g, 3.6 mmol, 2 equiv.) was added and the mixture was stirred for 5 h at the same temperature. Water (30 mL) was added to the resulting mixture, then extracted. This process was repeated three times. The organic phase was dried with sodium sulphate and the product was obtained as a white powder after the solvent was reduced under vacuum. Yield 60% (4.1 g).

The tosylated product (4.1 g, 10.9 mmol, 2 equiv.) was dissolved in 80 mL of acetonitrile then potassium carbonate (4.39 g, 32.8 mmol, 3 equiv.) was added. To the resulting mixture, propylamine (0.32 g, 5.5 mmol, 1 equiv.) dissolved preliminary in acetonitrile (10 mL), was added dropwise and the reaction mixture was refluxed for 15 days (82 °C) in a closed vessel. After filtration, the solvent was halfway evaporated under vacuum, then the mixture was left in the fridge at 0 °C for 12 hours. A white precipitate was formed, after filtration, the white powder was washed with cold acetonitrile (5 mL) and then diethyl ether (10 mL). Yield 30% (1.5 g). M.p 188 °C. 1H-NMR (300 MHz, DMSO-d6) δ ppm: 0.81 (t, J = 7.4 Hz, 3H, CH3–CH2), 1.41 (q, J = 7.4 Hz 2H, CH3–CH2–CH2), 2.24 (s, 3H, CH3–C), 2.27 (s, 3H, CH3–C), 2.45 (t, J = 7.4 Hz, 2H, Niso–CH2–CH2), 2.91 (t, J = 6.8 Hz 2H, CH2–CH2-Nprop), 3.79 (s, 3H, CH3–N), 3.97 (t, J = 6.8 Hz 2H, NPz–CH2–CH2), 6.24 (s, 1H, C–CH–C), 6.28 (s, 1H, C–CH–C). 13C-NMR (75 MHz, DMSO-d6) δ ppm: 11.3 (s, 2C, CH3–C, Pz), 11.8 (s, 2C, CH3–C, Pz-tripod), 20.6 (s, 1C, CH3–CH2), 31.0 (s, 1C, CH3–CH2–CH2), 36.1 (s, 2C, CH3–N), 47.8 (s, 2C, CH3–NPz), 55.0 (s, 2C, CH2–CH2–Nprop), 57.4 (s, 1C, CH2–CH2–Niso), 102.7 (s, 2C, C–C[double bond, length as m-dash]C, Pz), 102.9 (s, 2C, C–C[double bond, length as m-dash]C, Pz-tripod) 139.2 (s, 2C N–C, Pz) 139.4 (s, 2C, N–C, Pz-tripod) 145.1 (s, 2C, C–C–Pz), 145.3 (s, 2C, C–C, Pz-tripod). FTIR (KBr, cm−1): 3143 (w), 2969 (w), 1537 (s), 1422 (m), 1230 (m), 929 (w), 780 (m). HRSM (ESI) (methanol): m/z = 464.3244 [M + H]+.

2.3.2. Synthesis of Cu2LCl4 (1). Ligand (L) (45 mg, 0.097 mmol, 1 equiv.) was dissolved in methanol (4 mL). CuCl2·2H2O (33.2 mg, 0.195 mmol, 2 equiv.) was dissolved in methanol (3 mL) and added to the previous solution of (L), and stirred for 10 min at room temperature. The resulting mixture was allowed to vapor diffuse with diethyl ether (10 mL). Dark green single crystals were obtained after 6 days, washed with a mixture of diethyl ether and methanol (8[thin space (1/6-em)]:[thin space (1/6-em)]2), and collected. Yield 44% (31 mg). M.p 208 °C. FT-IR (KBr, cm−1): 3129 (w), 2955 (w), 1544 (s), 1425 (m), 1276 (m), 945 (w), 792 (m). HRMS (ESI) (acetonitrile): m/z = 561.2145 [L + CuCl]+, 659.11254 [L + Cu2Cl2]+, 263.12237 [1/2(L + Cu)]+.
2.3.3. Synthesis of [NiL(CH3OH)(H2O)](ClO4)2 (2). Ligand (L) (45 mg, 0.097 mmol, 1 equiv.) was dissolved in methanol (4 mL). Ni(ClO4)2·6H2O (35.8 mg, 0.098 mmol, 1 equiv.) was dissolved in methanol (3 mL) and added to the previous solution of (L), and stirred for 10 min at room temperature. The resulting mixture was allowed to vapor diffuse with diethyl ether (10 mL). Blue single crystals were obtained after 8 days, washed with a mixture of diethyl ether and methanol (8[thin space (1/6-em)]:[thin space (1/6-em)]2), and collected. Yield 29% (21 mg). M.p 200 °C. FTIR (KBr, cm−1): 3132(w), 2960(w), 1546(s), 1416(m), 1233(m), 943(w), 784(m). HRMS (ESI) (acetonitrile): m/z = 260.6259 [1/2(L + Ni)]+.
2.3.4. Synthesis [CoL(CH3OH)(H2O)](ClO4)2 (3). Ligand (L) (45 mg, 0.097 mmol, 1 equiv.) was dissolved in methanol (4 mL). Co(ClO4)2·6H2O (36.5 mg, 0.1 mmol, 1 equiv.) was dissolved in methanol (3 mL) and added to the previous solution of (L), and stirred for 10 min at room temperature. The resulting mixture was allowed to vapor diffuse with diethyl ether (10 mL). Orange single crystals were obtained after 9 days, washed with a mixture of diethyl ether and methanol (8[thin space (1/6-em)]:[thin space (1/6-em)]2), and collected. Yield 35% (26 mg). M.p. 192 °C. FT-IR (KBr, cm−1): 3131(w), 2963(w), 1554(s), 1430(m), 1278(m), 947(w), 801(m). HRSM (ESI) (acetonitrile): m/z = 261.1246 [1/2(L + Co)]+.
2.3.5. Synthesis of [FeL(NCS)2] (4). An ethanolic solution (2 mL) containing (19.5 mg, 0.098 mmol, 1 equiv.) of FeCl2·4H2O mixed with a small amount of ascorbic acid (5 mg) was rapidly added to a hot ethanol solution (2 mL) of KNCS (19 mg, 0.196 mmol, 2 equiv.). The mixture was added dropwise to an ethanolic solution (5 mL) of L (45 mg, 0.097 mmol, 1 equiv.). The resulting solution was left at room temperature to lead to yellow single crystals after a period of 6 days of slow evaporation, washed with ethanol and collected. Yield 37% (22 mg). M.p. 230 °C. FT-IR (KBr, cm−1): 3133(w), 2961(w), 2066(s), 1541(s), 1428(m), 1237(m), 935(w), 786(m). HRMS (ESI) (acetonitrile): m/z = 575.2326 [L + H2FeNCS]+.

2.4. Antibacterial activities

Antibacterial activities were evaluated using the disk diffusion method on agar with some modifications.37,38 Fifteen milliliters of Mueller–Hinton agar (45 °C) were poured into sterile Petri dishes (ϕ 90 mm). Each organism was separately suspended in a normal saline solution and transmittance (T) of 75–77% at λ = 530 nm was made, which is equal to 106 CFU mL−1. Each bacterial suspension was uniformly spread on a solid growth medium in a Petri dish. Once the plates were aseptically dried, 6 mm holes were drilled into the agar using a sterile Pasteur pipette. 100 μL of a previously prepared solution containing each compound (4 mg mL−1) was placed in the holes. The plates were incubated at 37 °C for 24 h. DMSO was used as a negative control since it has no antibacterial activities. On the other hand, lactic acid was used as a positive control due to its decent behavior against various bacteria types, while the antibiotic gentamycin was set to refer to the better positive control. The positive antimicrobial activity was read based on growth inhibition zone and compared with the solvent, as control. The tests were performed in triplicate, the average value of the three are reported.

2.5. Antifungal activities

2.5.1. Preparation of the substances. The preparation of the stock solution was performed by solubilizing 4 mg of each compound with DMSO (1 mL).
2.5.2. Preparation of the fungus. First, the FOA was isolated from Boufegousgharas date palm from Figuig in Morocco that is infected by the vascular fusariosis according to a literature protocol.39
2.5.3. Antifungal activities protocol. Distilled water (1 L) was added to PDA (39 g). The mixture was refluxed for 10 min, then sterilized at 120 °C for 20 min. After cooling, 3 sterile tubes were filled with respective volumes (50 μL, 100 μL and 200 μL) and completed up to 15 mL with liquid PDA, then spread over 8.5 cm diameter Petri dishes and then left at room temperature until solidification.40 After that, cultivated FOA was transplanted onto a pellet in the center of each Petri dish. The prepared Petri dishes were incubated at 28 °C for 5 days. The results are expressed as % inhibition by measuring the diameter of the FOA compared to the negative control containing only PDA, FOA and DMSO (200 μL).41 The tests were performed in triplicate; the average value of the three are reported.
image file: d2ra03414j-t1.tif
D0: diameter (cm) of FOA in the control, Dx: diameter (cm) of FOA in the test.

3. Result and discussion

3.1. Synthesis and characterization

A large number of pyrazole based complexes have been synthesized over the last decades.42,43 Our objective was to increase the number of coordination sites and flexibility of such ligands by designing a new ligand made of a bis-pyrazole synthon, namely 1,5,5′-trimethyl-1H,1′H-3,3′-bipyrazole. The synthesis was undertaken following a simple reaction pathway. Indeed, the reaction of p-toluenesulfonyl chloride with 2-(1′,5,5′-trimethyl-1H,1′H-[3,3′-bipyrazol]-1-yl)ethan-1-ol in the presence of sodium hydroxide in dichloromethane led to the tosyl-based derivative (yield 60%). Our envisaged target was a symmetric molecule with a double bis-pyrazole, thus our ligand design plan involved an alkylation of the present tosylated product to a propylamine in acetonitrile. The desired product L was obtained easily in the presence of a base as white powder due to the easy leaving group properties of the tosyl group.

Reaction of the ligand (L) with different metal salts, in methanol in 1[thin space (1/6-em)]:[thin space (1/6-em)]2 or 1[thin space (1/6-em)]:[thin space (1/6-em)]1 molar ratio was carried out. Reaction with CuCl2·2H2O in a 1[thin space (1/6-em)]:[thin space (1/6-em)]2 molar ratio afforded a binuclear Cu(II) complex (1) which was crystallized by diethyl ether vapour diffusion. Reaction with Ni(ClO4)2·6H2O or Co(ClO4)2·6H2O salts in a 1[thin space (1/6-em)]:[thin space (1/6-em)]1 molar ratio yielded to a mononuclear Ni(II) complex (2) which was also crystallized by diethyl ether vapour diffusion. The complex 4 was however synthetized in two steps involving the reaction of FeCl2·4H2O with KNCS in 1[thin space (1/6-em)]:[thin space (1/6-em)]2 molar ratio in ethanol with a small quantity of ascorbic acid to prevent oxidation of the metal centre. This process increased the reactivity of the iron salt and avoided the involvement of chloride anions during the coordination reaction with the ligand. In a second step, L was reacted with freshly prepared Fe(NCS)2 in ethanol in a 1[thin space (1/6-em)]:[thin space (1/6-em)]1 molar ratio to yield to an Fe(II) complex (4). Single crystals were obtained by slow evaporation in ethanol.

3.2. FT-IR and diffuse reflectance UV-visible spectroscopy

The ligand (L) exhibits some characteristic IR bands, centred at 3143, 2960, 1537 and 1230 cm−1 which can be assigned to the pyrazole N–H, the C–H aromatic vibrations, the aromatic C[double bond, length as m-dash]C and the aliphatic tertiary amine, respectively (Fig. S1). Noticeable shifts in the wavenumber were observed after coordination. Indeed, in the case of complexes 1–4, the stretching vibration associated to the N–H group at 3143 cm−1 was shifted to 3129 cm−1 (1), 3132 cm−1 (2), 3131 cm−1 (3) and 3133 cm−1 (4). On the other hand, the peaks associated with the C[double bond, length as m-dash]C aromatic rings vibration centred at 1537 cm−1 was shifted to 1544 cm−1 (1), 1546 cm−1 (2), 1554 cm−1 (3) and 1541 cm−1 (4). The C–H aromatic vibrations observed at 2960 cm−1 for L have shifted to 2955, 2964, 2963 and 2961 upon complexation in 1, 2, 3 and 4, respectively. Furthermore, the aliphatic tertiary amine respectively noticed at 1230 cm−1 also shifted to 1278, 1277, 1280, and 1275 cm−1 respectively for 1, 2, 3 and 4. Non coordinated perchlorate anions were also detected at 1084 and 1093 cm−1 for 2 and 3, respectively. A strong band was observed at 2066 cm−1 for 4, corresponding to the axial NCS ligand.

The electronic spectra of L and the complexes 1–4 were recorded by diffuse reflectance spectroscopy on solids. Absorption bands in the UV region (∼200–300 nm) are observed, which are assigned to intra-ligand transitions such as π–π* and n–π*, followed by a band around 320 nm assigned to metal-to-ligand charge transfer (MLCT) processes (Fig. S2). Complex 1 reveals in addition a large band centred around 525 nm and a well-shaped band centred at λmax = 760 nm. These two bands may be attributed to the two chromophores revealed in 1 by single crystals-X-ray diffraction (see next section). Complexes 2 reveals too a band centred at λmax = 610 nm of moderate intensity corresponding to d–d transitions whereas a weak band is found at λmax = 445 nm for 3.

3.3. Structural characterization

All compounds were crystallised from alcoholic solutions either by vapour diffusion of diethyl ether into methanolic mother liquors (1, 2 and 4) or by slow evaporation of the solvent (3). Compound 1 crystalized in the triclinic [P with combining macron]1 space group. The unit cell contains two molecular species and two co-crystallized methanol molecules. The two distinct copper centres are in the second oxidation state and occupy the centre of a distorted tetrahedral and square pyramidal coordination spheres which are completed by two terminal chloride ligands and two nitrogen atoms provided by the two branches of organic ligand in the case of Cu1 and two terminal chloride ligands and three nitrogen atoms in the case of Cu2, respectively (Fig. 1A). The average Cu–Cl bond lengths are found to be between 2.206(1)–2.3762(8) Å while the distances between the Cu(II) metal centres and the pyrazolic nitrogen atoms fall in the range 2.013(2)–2.052(2) Å, respectively. The N–N bond distances are in the range of 1.348(2)–1.363(2) Å, which is characteristic for pyrazole. The unit cell contains two molecular species where the presence of inter- and intramolecular interactions contribute to the stability of the crystal packing. More specifically, the intermolecular interactions (2.701(2) Å) highlighted in blue (Fig. 1B) are developed between the terminal chloro-ligands and the hydrogen atoms of the pyrazolic ring's methyl-groups. In a similar manner, a second set of intramolecular interactions are highlighted in red dotted lines and are developed between the methyl groups of one dimer with the pyrazolic ring of the neighbouring one (Fig. 1B).
image file: d2ra03414j-f1.tif
Fig. 1 (A) Ball and stick representation of 1. Colour code: C, black; N, nitrogen; green, chloride; light grey, hydrogen; cyan, copper. Co-crystallised solvent molecules have been omitted for clarity. (B) Wire stick representation for two neighbouring molecular species of 1. Their close contact interactions are highlighted with dotted lines. Colour code: blue dotted line, intermolecular; red-dotted line, intramolecular.

Compound 2 crystalized in the monoclinic P21/c space group. The unit cell contains four molecular species and two co-crystallized perchlorate counterions per complex. The Ni(II) centre is in the second oxidation state and occupy the centre of a distorted octahedral coordination sphere which is completed by four nitrogen pyrazolic atoms provided by the two branches of L, one water and a methanol solvent molecule, respectively (Fig. 2). Interestingly, the geometry deviates from the one observed in the case of 1, while the ligand coordinates to the metal centre only via pyrazolic nitrogen atoms. The Ni–O bond lengths observed in the water and methanol terminal ligands are found to be 2.099(1) and 2.092(1) Å while the distances between the Ni(II) metal centre and the pyrazolic nitrogen atoms fall in the range 2.104(1)–2.128(2) Å, respectively. The N–N bond distances are in the range of 1.360(2)–1.364(2) Å. The bond angles on the equatorial plane range between 86.24(7)–94.22(7)°. The pyrazolic nitrogen atoms at axial positions are located at a distance of 2.117(2) and 2.106(2) Å and form angles with the metal centre that fall in the range of 78.10(7)–98.53(7)°, respectively. In a similar fashion, compound 3 crystalized in the monoclinic P21/c space group. The unit cell contains four molecular species and two co-crystallized perchlorate counterions. The complex adopts an isostructural motif to the one observed in the 2 (Fig. 2). The Co(II) centre is in the second oxidation state and occupy the centre of a distorted octahedral coordination sphere, which is completed by four nitrogen pyrazolic atoms provided by the two branches of the organic ligand one water and a methanol solvent molecule, respectively. The Co–O bond lengths observed in the water and methanol terminal ligands are found to be 2.120(2) and 2.108(2) Å while the distances between the Co(II) metal centre and the pyrazolic nitrogen atoms fall in the range 2.123(2)–2.158(2) Å, respectively. All the Co–X bonds are found to be slightly elongated in comparison to complex 2. The pyrazolic N–N bond distances are in the range of 1.356(2)–1.359(3) Å. The bond angles on the equatorial plane range between 85.54(8)–94.94(9)°. The pyrazolic nitrogen atoms at axial positions are located at a distance of 2.155(2) and 2.158(2) Å, and form angles with the metal centre that fall in the range of 76.96(8)–99.80(8)°, respectively.


image file: d2ra03414j-f2.tif
Fig. 2 Ball and stick representation of [ML(CH3OH)(H2O)](ClO4)2 with M = Ni (A, 2) and M = Co (B, 3). Colour code: C, black; N, nitrogen; red, oxygen; light grey, hydrogen; green, nickel; pink, cobalt. Co-crystallised solvent molecules and counterions have been omitted for clarity.

Complex 4 crystalized in the P21/c space group too but the unit cell contains four molecular species. The Fe(II) centre is in the second oxidation state and occupy the centre of a distorted octahedral coordination sphere which is completed by four nitrogen pyrazolic atoms provided by the two branches of L and two SCN anions which are responsible for balancing the overall charge of the complex (Fig. 3). The bond lengths between the metal centre and the pyrazolic nitrogen donors (Fe–Npy) fall within the range of 2.226(2) and 2.304(2) Å while the distances between the Fe(II) metal centre and the NSCN nitrogen atoms are found to be 2.085(2) – 2.099(2) Å, respectively. Compound 4 exhibit longer M–NL distances compared to other reported complexes of this substance class, thus indicating a high-spin (HS) state for the Fe(II) ions. Additionally, the bond angles on the equatorial plane range between 87.35(8)–96.7(1)°. The pyrazolic nitrogen atoms at axial positions are located at a distance of 2.274(2) and 2.304(2) Å and form angles with the metal centre that fall in the range of 73.87(7)–98.96(8)°, respectively. The local distortion parameter around the metal ion is ΣHS = 73.42°.44 This structural parameter, defined as the sum of the deviations from 90° of the 12 cis-N–M–N angles, is useful to accurately evaluate the octahedral distortion of the MN6 coordination sphere.45


image file: d2ra03414j-f3.tif
Fig. 3 View of the molecular structure of [FeL(NCS)2] (4) at 150 K. Colour code: C, black; N, nitrogen; yellow, sulfur; light grey, hydrogen; olive green, iron.

3.4. Spin state and magnetic investigation

A57Fe Mössbauer spectrum of 4 was recorded in transmission geometry at room temperature to probe the oxidation and spin state. The spectrum reveals one iron site with isomer shift δ = 1.13 mm s−1 and quadrupole splitting ΔEQ = 1.08 mm s−1, characteristic of HS Fe(II) ions (Fig. 4). This result is consistent with the one obtained by single crystal X-ray diffraction which revealed a single Fe(II) site in the HS state too at 150 K. Such ΔEQ is smaller compared to iron(II) metallic salts, e.g. [Fe(H2O)6]SO4·7H2O which present a ΔEQ = 3.2 mm s−1.46 Actually ΔEQ is the result of two contributions to the electric field gradient originating from valence electrons (valence contribution) and to the local environment (lattice distortion), which is opposite in sign to the valence contribution.47,48 In the present case, the lattice contribution to the EFG is rather high, due to a distorted octahedron, which thereby decreases the quadrupole splitting value.
image file: d2ra03414j-f4.tif
Fig. 4 57Fe Mössbauer spectrum of 4 at 293 K recorded in transmission geometry.

Given these spin state characteristics, a SQUID analysis was undertaken to determine whether complex 4 could switch its spin states below 150 K. At room temperature, χMT = 3.71 cm3 K mol−1, which fits with Fe(II) ions in the HS state, as well as with the Mössbauer result (Fig. 5). Upon cooling, the χMT product remains constant even below 150 K, confirming a full HS state. Below 50 K, a decrease of χMT is observed in agreement with the zero-field splitting of HS Fe(II) ions.49 Thus complex 4 remains paramagnetic and do not display a thermally induced spin state crossover behaviour.


image file: d2ra03414j-f5.tif
Fig. 5 χMT vs. T for 4 over the temperature range 400–4.2 K. The measurement was repeated for three runs over the same temperature interval.

3.5. Antibacterial activities

The Ligand L and the coordination complexes 1–4 were tested against two Gram-positive bacteria (Staphylococcus aureus and Streptococcus spp.) and two Gram-negative bacteria (Escherichia coli and Klebsiella spp). The results are gathered in Table 1 and Fig. 6.
Table 1 Antibacterial activities of L and the complexes 1–4 against four strains (inhibition zones in mm)a
Compound Bacteria
S. aureus[p] St. spp.[p] E. coli[n] K. spp.[n]
a [p]: Gram-positive; [n]: Gram-negative.
L 13 11 10 13
1 27 12 28 17
2 21 18 20 23
3 25 14 26 18
4 10 11 11 12
DMSO 0 0 0 0
Lactic acid 17 21 15 17
Gentamicin 41 43 32 42



image file: d2ra03414j-f6.tif
Fig. 6 Antibacterial activities recap plot of L and the coordination complexes 1–4. Experiments were performed in triplicate.

All compounds showed moderate to decent antibacterial activities, compared to literature reports. Complexes 1, 2 and 3 demonstrate noticeable improvements in term of inhibition compared to the ligand L and complex 4. In particular, complexes 1 and 3 reveal significant enhancement towards both Gram-positive S. aureus and Gram-negative E. coli. This is much higher compared to [Co(dmphen)X2] (dmphen = 2,9-dimethyl-1,10-phenanthroline) which was found to exhibit 17 and 18 mm for E. coli and.

S. aureus in the case of X = Br and 18 mm for both E. coli and S. aureus for X = NCS.50 The inhibition zone is much higher than the positive control lactic acid too. Both of these complexes exhibit modest inhibition increase against Klebsiella spp bacteria, to match the same score as lactic acid. On the other hand, complex 2 affords an inhibition jump up in all tested bacteria, especially the Gram-negative Klebsiella spp. which was again greater than lactic acid.

In conclusion, the best recorded results for S. aureus were claimed for 1 and 3, which show 27 and 25 mm inhibition zones, respectively. The highest attitude against Streptococcus spp was found for 2 with a decent 18 inhibition zone. Meanwhile 1 and 3 earned once again the steepest inhibition zone for E. coli being 28 and 26 mm, respectively. Finally, regarding Klebsiella spp., the top fruition was reached by 2 with 23 mm. These results were compared to several reported ligand and complexes with potential antibacterial behaviors and proved to be better to competitive.51–53

3.6. Antifungal activities

The antifugal activities of our compounds were also investigated vs. Fusarium oxysporum f.sp. albedinis (Fig. 7), which is a real threat in modern forestry, in particular to date palm (Phoenix dactylifera).54
image file: d2ra03414j-f7.tif
Fig. 7 Antifungal activities of L and the coordination complexes 1–4. Experiments were performed in triplicate.

According to Table 2, all tested samples present considerable anti-Fusarium activities, but complexes 1 and 4 can be distinguished. These results are quite expected due to the fact that the use of coordination complexes is assisted by the improvement of the overall therapeutic activities.55 The complexation of L with copper and iron metal ions leads to an increase in the lipophilicity and a simultaneous expansion of the hydrocarbon portion. In addition, chelation lowers the polarity of the metal ion due to the partial sharing of its positive charge with the donor groups in the coordination complexes. This process raises the lipophilicity of the metal complexes and thus facilitates their permeability through the lipid bilayer of membranes.56 To confirm this effect, these complexes were tested three times to determine the necessary volume to reach a 50% inhibition: 32 and 83.5 μmol L−1 were needed for 1 and 4, respectively. These results are superior to literature results for many pyrazole derivatives.57–59

Table 2 Antifungal activities of L and the complexes 1–4
Compound Sample volumes (μL) Concentration (μmol L−1) Dx (cm) Inhibition (%)
L 50 28 7.5 11.76
100 58.2 5.6 34.12
200 114.3 5.3 38
1 50 8.5 7.5 11.76
100 17.7 5.7 32.94
200 34.8 4.2 51
2 50 16.9 7.2 15.29
100 35.1 6.5 23.53
200 68.8 4.8 44
3 50 16.8 7.4 12.94
100 3.5 7.3 14.12
200 68.7 6 29
4 50 20.5 7.6 10.59
100 42.5 5 41.18
200 83.5 4.3 49


4. Conclusions

In summary, we have brought a new class of molecules based on pyrazole rings. The synthesis of such molecules remains challenging in most cases giving the limited literature available. Yet, we have established a simple method that awarded us the ligand L with high nitrogen donors and high flexibility. Four coordination complexes were synthesised with different topologies, which was established by single crystal X-ray diffraction. The antibacterial activities performed on both Gram-positive as wells as Gram-negative bacteria, revealed competitive properties compared to existing literature, in particular for 1 and 3. In addition, remarkable antifungal behaviours towards Fusarium oxysporum f.sp. albedinis fungi were obtained for 1 and 4.

Author contributions

YD performed synthesis, characterization and wrote the paper with YG and HNM. SR and YG both designed and managed the project. AT and AO run some experiments. HNM undertook all X-ray studies. RB, SO and SM performed antibacterial and antifungal experiments. AR recorded SQUID measurements.

Conflicts of interest

There are no conflicts to declare.

Acknowledgements

This research was supported by a bilateral WBI-Morocco grant (COP 22 Program 2018–2022), the Fonds de la Recherche Scientifique-FNRS (PDR T.0095.21), PPR2-MESRSFC-CNRST-P10 project (Morocco), CCCDI – UEFISCDI, project number PN-III-CEI-BIM-PBE-2020-0042/8BM/2021, Ministère de l’Education et de la Recherche de Roumanie, WBI Roumanie and University of Glasgow. We thank CNRST Morocco and WBI-Morocco for an excellence PhD stipendium as well as the UCLouvain international action committee for a PhD scholarship allocated to AO.

References

  1. Y. Nakahara, T. Toda, A. Matsunami, Y. Kayaki and S. Kuwata, Chem.–Asian J., 2018, 13, 73–80 CrossRef CAS PubMed.
  2. V. Tsygankova, A. Ya, O. Shtompel, O. Romaniuk, M. Yaikova, A. Hurenko, R. Solomyanny, E. Abdurakhmanova, S. Klyuchko and O. Holovchenko, J. Med. Biotechnol. Genetics S., 2017, 2, 10–32 Search PubMed.
  3. G. H. Sayed, M. E. Azab, K. E. Anwer, M. A. Raouf and N. A. Negm, J. Mol. Liq., 2018, 252, 329–338 CrossRef CAS.
  4. A. Ansari, A. Ali and M. Asif, New J. Chem., 2017, 41, 16–41 RSC.
  5. K. Karrouchi, S. Radi, Y. Ramli, J. Taoufik, Y. N. Mabkhot, F. A. Al-Aizari and M. h. Ansar, Molecules, 2018, 23, 134 CrossRef PubMed.
  6. B. M. Chougala, S. Samundeeswari, M. Holiyachi, L. A. Shastri, S. Dodamani, S. Jalalpure, S. R. Dixit, S. D. Joshi and V. A. Sunagar, Eur. J. Med. Chem., 2017, 125, 101–116 CrossRef CAS PubMed.
  7. E. S. Nossier, H. H. Fahmy, N. M. Khalifa, W. I. El-Eraky and M. A. Baset, Molecules, 2017, 22, 512 CrossRef.
  8. A. Oulmidi, S. Radi, A. Idir, A. Zyad, I. Kabach, M. Nhiri, K. Robeyns, A. Rotaru and Y. Garcia, RSC Adv., 2021, 11, 34742–34753 RSC.
  9. Y. Usami, Y. Tsujiuchi, Y. Machiya, A. Chiba, T. Ikawa, H. Yoneyama and S. Harusawa, Heterocycles, 2020, 101, 496–511 CrossRef CAS.
  10. I. O. Ali, T. M. Salama, M. F. Bakr, A. A. El-Henawy, M. A. Lateef and H. A. Guma, Res. Chem. Intermed., 2018, 44, 5193–5222 CrossRef CAS.
  11. A. Oulmidi, S. Radi, H. N. Miras, N. N. Adarsh and Y. Garcia, Sustainability, 2020, 13, 288 CrossRef.
  12. N. Adarsh, D. K. Kumar and P. Dastidar, CrystEngComm, 2009, 11, 796–802 RSC.
  13. R. Bikas, V. Kuncser, J. Sanchiz, G. Schinteie, M. Siczek, H. Hosseini-Monfared and T. Lis, Polyhedron, 2018, 147, 142–151 CrossRef CAS.
  14. Z. Zhang and M. J. Zaworotko, Chem. Soc. Rev., 2014, 43, 5444–5455 RSC.
  15. V. Kumar, M. El-Massaoudi, S. Radi, K. Van Hecke, A. Rotaru and Y. Garcia, New J. Chem., 2020, 44, 13902–13912 RSC.
  16. S. Radi, M. El-Massaoudi, H. Benaissa, N. Adarsh, M. Ferbinteanu, E. Devlin, Y. Sanakis and Y. Garcia, New J. Chem., 2017, 41, 8232–8241 RSC.
  17. K. Karrouchi, S. Radi, Y. Ramli, J. Taoufik, Y. N. Mabkhot, F. A. Al-Aizari and M. h. Ansar, Molecules, 2018, 23, 134 CrossRef PubMed.
  18. A. Tigreros and J. Portilla, RSC Adv., 2020, 10, 19693–19712 RSC.
  19. A. Cetin, A. Korkmaz and I. Bildirici, Colloid Polym., 2018, 296, 1249–1257 CrossRef CAS PubMed.
  20. K. Chkirate, S. Fettach, K. Karrouchi, N. K. Sebbar, E. M. Essassi, J. T. Mague, S. Radi, M. E. A. Faouzi, N. Adarsh and Y. Garcia, J. Inorg. Biochem., 2019, 191, 21–28 CrossRef CAS PubMed.
  21. R. Kulmaczewski, F. Bamiduro, N. Shahid, O. Cespedes and M. A. Halcrow, Chem.–Eur. J., 2021, 27, 2082–2092 CrossRef CAS PubMed.
  22. A. Oulmidi, A. Rotaru, S. Radi and Y. Garcia, Hyperfine Interact., 2021, 242, 1–6 CrossRef.
  23. H.-J. Lin, S. Lutz, C. O'Kane, M. Zeller, C.-H. Chen, T. Al Assil and W.-T. Lee, Dalton Trans., 2018, 47, 3243–3247 RSC.
  24. S. Mandal, M. Mondal, J. K. Biswas, D. B. Cordes, A. M. Slawin, R. J. Butcher, M. Saha and N. C. Saha, J. Mol. Struct., 2018, 1152, 189–198 CrossRef CAS.
  25. R. Czarnomysy, A. Surażyński, A. Muszynska, A. Gornowicz, A. Bielawska and K. Bielawski, J. Enzyme Inhib. Med. Chem., 2018, 33, 1006–1023 CrossRef CAS PubMed.
  26. R. P. Paitandi, S. Mukhopadhyay, R. S. Singh, V. Sharma, S. M. Mobin and D. S. Pandey, Inorg. Chem., 2017, 56, 12232–12247 CrossRef CAS PubMed.
  27. K. Chkirate, K. Karrouchi, N. Dege, N. K. Sebbar, A. Ejjoummany, S. Radi, N. Adarsh, A. Talbaoui, M. Ferbinteanu and E. M. Essassi, New J. Chem., 2020, 44, 2210–2221 RSC.
  28. S. Jodeh, G. Hanbali, S. Tighadouini, S. Radi, O. Hamed and D. Jodeh, BMC Chem., 2019, 13, 1–10 CrossRef CAS PubMed.
  29. M. El-Massaoudi, S. Radi, M. Lamsayah, S. Tighadouini, K. K. Séraphin, L. K. Kouassi and Y. Garcia, J. Cleaner Prod., 2021, 284, 124757 CrossRef CAS.
  30. S. Radi, M. El Massaoudi, M. Bacquet, S. Degoutin, N. Adarsh, K. Robeyns and Y. Garcia, Inorg. Chem. Front., 2017, 4, 1821–1831 RSC.
  31. K. Lagarec and D. Rancourt, Recoil - Mössbauer Spectral Analysis Software for Windows, version 1.0, University of Ottawa, Ottawa, ON, 1998 Search PubMed.
  32. G. M. Sheldrick, Acta Crystallogr., Sect. A: Found. Crystallogr., 1990, 46, 467–473 CrossRef.
  33. G. M. Sheldrick, Acta Crystallogr., Sect. A: Found. Crystallogr., 2008, 64, 112–122 CrossRef CAS.
  34. L. J. Farrugia, J. Appl. Crystallogr., 1999, 32, 837–838 CrossRef CAS.
  35. R. Clark and J. Reid, Acta Crystallogr., Sect. A: Found. Crystallogr., 1995, 51, 887–897 CrossRef.
  36. A. Attayibat, S. Radi, Y. Lekchiri, A. Ramdani, B. Hacht, M. Morcellet, M. Bacquet and S. Willai, J. Chem. Res., 2006, 2006, 655–657 CrossRef.
  37. J. K. Hurst, Coord. Chem. Rev., 2005, 249, 313–328 CrossRef CAS.
  38. D. Chatterjee, A. Mitra and R. E. Shepherd, Inorg. Chim. Acta, 2004, 357, 980–990 CrossRef CAS.
  39. A. Chafi, R. Benabbes, M. Bouakka, A. Hakkou, N. Kouddane and A. Berrichi, J. Mater. Environ. Sci., 2015, 6, 1266–1275 Search PubMed.
  40. F. Neri, M. Mari and S. Brigati, Plant Pathol., 2006, 55, 100–105 CrossRef CAS.
  41. A. Hmouni, M. Hajlaoui and A. Mlaiki, EPPO Bull., 1996, 26, 697–705 CrossRef.
  42. N. Onishi, R. Kanega, E. Fujita and Y. Himeda, Adv. Synth. Catal., 2019, 361, 289–296 CrossRef CAS.
  43. Ž. K. Jaćimović, G. Giester, M. Kosović, G. A. Bogdanović, S. B. Novaković, V. M. Leovac, N. Latinović, B. B. Hollo and K. M. Szecsenyi, J. Therm. Anal. Calorim., 2017, 127, 1501–1509 CrossRef.
  44. R. Ketkaew, Y. Tantirungrotechai, P. Harding, G. Chastanet, P. Guionneau, M. Marchivie and D. J. Harding, Dalton Trans., 2021, 50, 1086–1096 RSC.
  45. Y. Garcia, G. Bravic, D. Chasseau, C. Gieck, W. Tremel and P. Gütlich, Inorg. Chem., 2005, 44, 9723–9730 CrossRef CAS PubMed.
  46. S. DeBenedetti, G. Lang and R. Ingalls, Phys. Rev. Lett., 1961, 6, 60–62 CrossRef.
  47. P. Gütlich and Y. Garcia, in Mössbauer spectroscopy – Tutorial Book, ed. Y. Yoshida and G. Langouche. Springer, 2013, ch. 2, pp. 23–89 Search PubMed.
  48. P. Gütlich and Y. Garcia, J. Phys.: Conf. Ser., 2010, 217, 012001 CrossRef.
  49. Y. Garcia, C. M. Grunert, S. Reiman, O. Van Campenhoudt and P. Gütlich, Eur. J. Inorg. Chem., 2006, 3333–3339 CrossRef CAS.
  50. M. Al-Noaimi, F. F. Awwadi, S. F. Haddad, W. H. Talib, S. Jodeh, S. Radi, T. B. Hadda, M. Abdoh, S. Naveen and N. Lokanath, J. Mol. Struct., 2015, 1086, 153–160 CrossRef CAS.
  51. Y. N. Mabkhot, A. M. Al-Majid, A. Barakat, S. S. Al-Showiman, M. S. Al-Har, S. Radi, M. M. Naseer and T. B. Hadda, Int. J. Mol. Sci., 2014, 15, 5115–5127 CrossRef PubMed.
  52. M. F. El Shehry, M. M. Ghorab, S. Y. Abbas, E. A. Fayed, S. A. Shedid and Y. A. Ammar, Eur. J. Med. Chem., 2018, 143, 1463–1473 CrossRef CAS PubMed.
  53. S. Tighadouini, S. Radi, R. Benabbes, M. H. Youssoufi, S. Shityakov, M. El Massaoudi and Y. Garcia, ACS Omega, 2020, 5, 17743–17752 CrossRef CAS PubMed.
  54. D. A. Komeil, M. Y. Abdalla, A. F. El-Bebany and A. B. A. Basyony, Asian J. Plant Sci., 2021, 20, 363–369 CrossRef CAS.
  55. I. Ali, W. A. Wani, A. Khan, A. Haque, A. Ahmad, K. Saleem and N. Manzoor, Microb. Pathog., 2012, 53, 66–73 CrossRef CAS PubMed.
  56. Z. H. Chohan, H. Pervez, K. M. Khan, A. Rauf, G. M. Maharvi and C. T. Supuran, J. Enzyme Inhib. Med. Chem., 2004, 19, 85–90 CrossRef CAS PubMed.
  57. S. Tighadouini, S. Radi, F. Abrigach, R. Benabbes, D. Eddike and M. Tillard, J. Chem. Inf. Model., 2019, 59, 1398–1409 CrossRef CAS PubMed.
  58. Y. Kaddouri, F. Abrigach, S. Ouahhoud, R. Benabbes, M. El Kodadi, A. Alsalme, N. Al-Zaqri, I. Warad and R. Touzani, Front. Chem., 2020, 1073 Search PubMed.
  59. G. Mondal, H. Jana, M. Acharjya, A. Santra, P. Bera, A. Jana, A. Panja and P. Bera, Med. Chem. Res., 2017, 26, 3046–3056 CrossRef CAS.

Footnote

Electronic supplementary information (ESI) available. CCDC 2154263–2154266. For ESI and crystallographic data in CIF or other electronic format see https://doi.org/10.1039/d2ra03414j

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