Wenhao Danga,
Meiling Lia,
Wencai Fua,
Kaili Zhua,
Hui Liua,
Jinxia Yuanac,
Wenhua Gaod,
Guoning Chenb and
Zhiwei Wang
*ab
aKey Laboratory of Clean Pulp & Papermaking and Pollution Control of Guangxi Province, College of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, China. E-mail: wangzhiwei@gxu.edu.cn
bGuangxi Bossco Environmental Protection Technology Co., Ltd, Nanning, 530007, China
cCollege of Environmental Science and Forestry, State University of New York, Syracuse, USA
dSchool of Light Industry and Engineering, South China University of Technology, Guangzhou, 510006, China
First published on 15th February 2022
Exogenous addition of acyl-homoserine lactone (AHL) signaling molecules can improve or inhibit the methane production performance of anaerobic granular sludge (AnGS) by quorum sensing (QS). To explore the specific effect of AHLs on AnGS, 2 μM of signal molecules were added to the reactor and we analyzed their effects on AnGS biodiversity, extracellular polymeric substance (EPS), specific methanogenic activity (SMA) and chemical oxygen demand (COD) removal rate of AnGS. The results indicated that the four types of AHLs improve the COD removal rate, SMA and organic composition of AnGS. The addition of N-(β-ketocaproyl)-DL-homoserine lactone (3O-C6-HSL) yielded the greatest increase in methanogenic activity, reaching a maximum of 30.83%. The four types of AHLs stimulate the secretion of EPS in AnGS by group sensing regulation. The addition of N-hexanoyl-L-homoserine lactone (C6-HSL), N-octanoyl-DL-lactone (C8-HSL) and 3O-C6-HSL induced the enrichment of Actinobacteria. Thus, the process of hydrolysis and acidification of AnGS is accelerated. The addition of N-butyryl-DL-homoserine lactone (C4-HSL), C6-HSL and 3O-C6-HSL promote the potential methanogenic metabolic pathway of AnGS. The addition of all AHLs directly or indirectly enhanced the methane metabolism pathway of sludge and improved the specific methane generation activity of AnGS. These results are expected to provide preliminary research data for enhancing the methane production efficiency of reactors and enriching the biological activity of AnGS.
A quorum-sensing system is an important communication tool for microorganisms to communicate with their surroundings.5 The microbial population can adjust the cooperative growth and gene expression of the whole biological community through the generation, release and detection of extracellular signal molecules, and quorum-sensing phenomena are noted in both Gram-negative bacteria and Gram-positive bacteria.6 Quorum sensing can also occur between Archaea. The study indicates that AHL-based quorum sensing may be used by several species of methanogenic Archaea.7 QS is a continuous process. With the increase in bacterial population density, signal molecules also accumulate in the environment. When the content of signal molecules increases to a certain concentration, signal molecules bind to QS receptors, leading to changes in gene expression. This induction of gene expression modulates numerous processes, such as bioluminescence production, biofilm formation, and secondary metabolite production, which can greatly improve the ability of microorganisms to survive in complex environments.8 The microbial community of anaerobic granular sludge is a key component of wastewater treatment.9 Ding studied the presence and secretion of signal molecules in anaerobic granular sludge under different pH environments, and found that AHLs secretion of anaerobic granular sludge decreased in alkaline environment.10 Ma examined sludge in 10 industrial anaerobic reactors and identified four potential universal AHLs in AnGS that are involved in the synthesis of EPS and the granulation of anaerobic sludge.11 Lu introduced AHLs into anaerobic reaction and found that it could improve the removal rate of organic matter, but there was a lack of in-depth analysis of the mechanism.12
Therefore, four signaling molecules (N-hexanoyl-L-homoserine lactone, C6-HSL; N-(β-ketocaproyl)-DL-homoserine lactone, 3O-C6-HSL; N-butyryl-DL-homoserine lactone, C4-HSL; N-octanoyl-DL-lactone, C8-HSL) were added to a sewage reactor to observe their effects on AnGS for continuous culture for one month in this study. The changes of COD removal rate, methanogenic activity and volatile suspended solid/total suspended solid (TSS) of AnGS were compared between the experimental group and control group. The experimental work also quantitatively analyzed the changes of EPS components in sludge, and finally, combined with the changes of microbial community structure, explained the action mechanism of AHLs on anaerobic granular sludge. This study may provide basic data for the development of QS-based strategies to regulate anaerobic particle reactor technology.
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The specific method is as follows: take two test tubes and mark them as 1 and 2. Tube 1 contained 100 μL EPS extract, 900 μL deionized water, and 2 mL reagent A. Tube 2 contained 100 μL EPS extract, 900 μL deionized water, and 2 mL reagent S1. After standing for 10 min, 0.2 mL Folin–Ciocalteu reagent was added to the two test tubes, and heated in a 40 °C water bath for 10 min. The absorbance was measured by UV spectrophotometer at 625 nm after cooling. The blank group used 1 mL deionized water. The absorbance of solution in test tubes 1 and 2 was denoted as Atotal and Ablind respectively. Calculate the absorbance of protein and humus according to formula (2) and (3). Compared with a standard curve generated with BSA and sodium humate and calculate the protein and humic acid content.
Apr = 1.25(Atotal − Ablind) | (2) |
Ahu = Atotal − Apr | (3) |
Cluster analysis was performed on samples using Uparse software, and the similarity between microorganisms was greater than 97%, which was defined as an OTU (operational taxonomic unit). The Simpson index, Shannon index, the Converge index, Ace index and Chao index of microorganisms were calculated using QIIME software. Statistical analysis of microbial data using R language tools.
The PICRUSt was used to calculate the metabolic function of flora and microbial gene pathway.23
Fig. 1-b shows the changes in the specific methane-producing activity of AnGS after the addition of signal molecules in the culture process. After 12 days of culture, the SMA of all the experimental groups with added signal molecules was greater than that of the control group. With the addition of C6-HSL, 3O-C6-HSL, C4-HSL and C8- HSL groups, the SMA increased by 26.06%, 26.18%, 11.10% and 30.83%, respectively. In conclusion, the addition of AHL with different chemical structures improve the COD removal rate and SMA of AnGS on wastewater and play effective roles in promoting the anaerobic reactor. The promotion effects of the four types of AHL differ. Among them, C6-HSL, C8-HSL and 3O-C6-HSL have better COD removal rates, but their effects do not significantly different from each other. C6-HSL and 3O-C6-HSL exhibit better promotion effects than SMA.
Fig. 1-c shows the VSS/TSS of AnGS in different reactors after 28 days of culture. The ratio of VSS/TSS represents the proportion of microbial content in AnGS. In the process of wastewater treatment, it is generally believed that a ratio greater than 0.6 indicates that the sludge has good performance, whereas a ratio less than 0.6 indicates that the sludge has started to calcify.
The VSS/TSS of the experimental groups with the addition C4-HSL, C6-HSL, C8-HSL and 3O-C6-HSL increased by 3.94%, 3.36%, 6.64% and 2.36%, respectively. These results proved that the addition of exogenous signal molecules AHLs can be beneficial to increase the organic components of granular sludge and improve sludge activity. Among them, C8-HSL exhibited the most obvious increase in biological activity.
As noted in the figure, as the reaction time increases, the overall EPS content exhibited a trend of first increasing and then decreasing. This finding may be related to the activity cycle of microorganisms. Specifically, in the logarithmic growth phase, the content of EPS increases with increasing culture time. After the community structure of anaerobic granular sludge is stable, the content of EPS decreases with increasing culture time. The content of EPS decreases with increasing culture time.24
Overall, the addition of exogenous AHLs promoted the secretion of EPS. EPS induces the enrichment of functional microorganisms, increases the extracellular electron transfer active medium (c-Cyts), establishes and speeds up the methane production process of diet, so as to enhance the methane production efficiency of sludge.25 AHLs can promote EPS secretion through quorum sensing, thus improving the performance of AnGS.
Reactor | Shannon | Simpson | Ace | Chao | Converge | OTU |
---|---|---|---|---|---|---|
Control | 3.23 | 0.170 | 560.68 | 566.28 | 0.9970 | 449 |
C4-HSL | 2.86 | 0.240 | 660.39 | 640.51 | 0.9967 | 436 |
C6-HSL | 4.07 | 0.056 | 690.31 | 688.24 | 0.9961 | 574 |
C8-HSL | 4.28 | 0.034 | 702.02 | 703.22 | 0.9967 | 596 |
3O-C6-HSL | 3.49 | 0.106 | 566.26 | 557.94 | 0.9972 | 478 |
The Simpson and Shannon indices reflect the diversity of the microbial community in sludge. The greater the Simpson index, the lower the microbial community diversity. The greater the Shannon index, the higher the microbial community diversity.26,27 Table 1 shows that the addition of C6-HSL, C8-HSL and 3O-C6-HSL is beneficial for improving the microbial diversity of AnGS. C8-HSL exhibited the best promotion effect on AnGS biodiversity. However, the addition of C4-HSL did not improve the microbial diversity of AnGS but decreased it.
Ace and Chao indices reflect the abundance of the microbial community in the sample.26,27 The greater the value of these indexes, the greater the abundance of the microbial community. The results in Table 1 show that the abundance of microorganisms in AnGS increased in the experimental group upon the addition of four types of signal molecules, and the increase in C8-HSL was the most obvious.
Fig. 3 shows the composition analysis of bacteria in AnGS after adding different signal molecules. At the phylum level, Actinobacteria was the dominant phylum in all the reactors. However, it should be noted that Actinobacteria was slightly reduced in the C4-HSL addition group. Compared with the control group, the addition of C6-HSL and C8-HSL increased Actinobacteria by 36.20%, 18.50%. Actinobacteria is one of the most common phyla of hydrolytic acidification. The increase in Actinobacteria indicates that the addition of C6-HSL and C8-HSL accelerate the hydrolytic acidification process of AnGS.25 AHLs is considered a signal molecule for Gram-negative bacteria, but results showed an increase in Gram-positive bacteria. There may be two reasons for this. The chemical structure of AHLs is similar to that of actinomycete signaling molecules, resulting in a stimulant effect.28 When Gram-negative bacteria are effected, Gram-positive bacteria have some indirect influence.
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Fig. 3 Community analysis of bacteria: (a) analysis of bacterial community structure at the phylum level; (b) analysis of bacterial community structure at the genus level. |
58.07%, 46.64% and 46.75% reductions in Firmicutes were noted in the C6-HSL, C8-HSL, and 3O-C6-HSL groups, respectively, compared to the control group. In contrast, C4-HSL only yielded a slight reduction. Synergistetes can metabolize glucose and acetic acid. In the experimental group with the addition of C6-HSL, 3O-C6-HSL and C8-HSL, the proportion of Synergistetes increased significantly. Synergistetes can metabolize glucose and acetic acid. This finding indicates that the addition of signal molecules can significantly improve the utilization of glucose and acetic acid and further promote the treatment efficiency of the reactor.29 In general, at the phylum level, no significant differences in Synergistetes bacteria were noted between the experimental group supplemented with C4-HSL and the control group. However, significant differences in for Synergistetes bacteria were noted between the experimental group supplemented with C6-HSL, C8-HSL and 3O-C6-HSL and the control group.
At the genus level, the dominant genus in all the reactors was Georgenia. Similarly, the proportion of Georgenia microorganisms in the experimental group supplemented with C4-HSL was slightly reduced, whereas the number of Georgenia in the other three experimental groups was greater than that in the control group. Georgenia increased by 48.18%, 25.63% and 10.52% in the experimental group supplemented with C6-HSL, 3O-C6-HSL and C8-HSL compared with the control group, respectively. Georgenia is an actinomycete, which is a hydrolytic acidifying bacterium.30 This shows that the addition of C6-HSL, 3O-C6-HSL and C8-HSL can increase the number of actinomycetes and accelerate the hydrolysis and acidification of pollutant substrates in the reactor. Compared with the control group, Clostridium_Sensu_Stricto_6 in the experimental group decreased by 67.30%, 53.15% and 54.93% with the addition of C6-HSL, 3O-C6-HSL and C8-HSL, respectively. From the data, at the genus level, the microbial community structure of the experimental group added C4-HSL did not change significantly, but Clostridium_Sensu_Stricto_6 decreased significantly after adding C6-HSL, 3O-C6-HSL and C8-HSL. Combined with the microbial diversity data, it can be seen that the microbial induction effect of C4-HSL on AnGS is not obvious. C4-HSL has no significant effect on the performance of AnGS.
Fig. 4 shows the composition analysis of archaea in AnGS. The figure demonstrates that the addition of AHL signaling molecules does not affect the main microbial composition of archaea in AnGS, and the dominant phylum remains Euryarchaeota. Among the five reactors, Crenarchaota (Archaeota) accounted for 9.65%, 13.98%, 14.36%, 7.57% and 20.02%, respectively. In the reactors supplemented with C4-HSL, C6-HSL and 3O-C6-HSL, Euryarchaeota shows a decreasing trend, whereas Crenarchaota shows an increasing trend. At the genus level, the dominant bacterial genera of the five reactors were Methanobacterium and Methanosaeta.
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Fig. 4 Community analysis of archaea: (a) analysis of archaeal community structure at the phylum level; (b) analysis of archaeal community structure at the genus level. |
In the control group and the experimental group supplemented with C4-HSL, C6-HSL, C8-HSL and 3O-C6-HSL, Methanobacterium accounted for 52.87%, 54.28%, 44.52%, 56.65% and 54.30%, respectively. Methanosaeta accounted for 34.80%, 27.44%, 35.73%, 33.38% and 20.86%, respectively.
In addition to the above two microorganisms, norank_f_Bathyarchaeia also accounted for a portion of the reactor, accounting for 9.63%, 13.96%, 14.33%, 7.55% and 19.97% in the five reactors, respectively. Methanobacterium is a hydrogenophilic methanogen, Methanosaeta is an acidophilic methanogen,31 and norank_f_Bathyarchaeia is bacterium in the Bathyarchaeota genus that may be able to produce methane through a potential methanogenic metabolic pathway (potential methanogenic pathway of Bathyarchaeota). However, to date, there has been no evidence that this species metabolizes methane. This information needs to be verified by further physiological and biochemical experiments.32
There are competitive quorum-sensing between microbial colonies, which may cause some microbes to be promoted and others to be inhibited.28 In the C6-HSL reactor, a 15.79% reduction in Methanobacterium was noted compared with the control group. The amount of Methanosaeta in the reactor with C4-HSL and 3O-C6-HSL was reduced by 21.15% and 40.06%, respectively, compared with the control group. Norank_f_Bathyarchaeia increased by 44.96%, 48.81% and 107.37% in the C4-HSL, C6-HSL and 3O-C6-HSL reactors, respectively, compared with the control group. The results showed that the addition of C4-HSL, C6-HSL and 3O-C6-HSL could increase the content of norank_f_Bathyarchaeia in AnGS. Among them, the experimental group supplemented with 3O-C6-HSL exhibited the best growth promotion effect on norank_f_Bathyarchaeia. The experimental group supplemented with 3O-C6-HSL exhibited the greatest promotion of methanogenic activity compared with the control group, which may also verify to a certain extent that norank_f_Bathyarchaeia metabolizes methane.
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Fig. 5 Relative abundance of (a) enriched pathway and (b) genes encoding enzymes involved in methanogenesis. |
“ko00680” is a methane metabolism pathway that includes methane generation and in methanogenesis metabolism. The proportions of ko00680 in the control group and the experimental groups supplemented with C6-HSL, 3O-C6-HSL, C4-HSL and C8-HSL were 17.78%, 19.85%, 19.63% and 19.09%, respectively. The gene profile of methane growth and metabolism pathway in control group was 16.89%. More “ko00680” were identified in the experimental groups compared with the control group. Fig. 2 also shows that the methanogenic activity of the experimental group is greater than that of the control group. It shows that the experimental group has a stronger ability to metabolize methane. This finding suggests that the addition of signaling molecules to AHLs enhanced gene abundance in the methane metabolic pathway.
In addition, “ko02024” is a quorum-sensing metabolic pathway. In the control group and the experimental group supplemented with C6-HSL, 3O-C6-HSL, C4-HSL and C8-HSL this index accounted for 2.40%, 2.51%, 2.45% and 2.33% respectively, of all pathways. The gene abundance of quorum-sensing metabolic pathway in the control group was 2.14%. Similarly, more genes were identified in the experimental groups compared with the control group. This may be because the addition of signal molecules increases the microbial abundance of anaerobic granular sludge, resulting in increased gene abundance of quorum sensing metabolic pathway.
Methanogens can obtain energy for growth by converting a limited number of substrates to methane under anaerobic conditions. Three types of methanogenic pathways are known: CO2 to methane, methanol to methane, and acetate to methane.34 By monitoring the unique enzymes in methanogenesis, we can understand the metabolism of methanogens in essence. Fig. 5-b shows the gene abundance of related enzymes in the methane-producing pathway. Coenzyme F420 hydrogenase (EC: 1.12.98.1), formate dehydrogenase (EC: 1.2.1.2) and formyl-furan dehydrogenase (EC: 1.2.99.5) are important enzymes involved in the hydrotrophic methanogenesis pathway.35 In the process of methane production, coenzyme F420 hydrogenase acts as an electron carrier during the reaction process, formate dehydrogenase controls the conversion of formic acid to CO2 and H2, and formyl-furan dehydrogenase catalyzes36 the initial step of the conversion of CO2 to CH4. The relative abundance of important hydrogen-trophic methane-related enzymes involved in the control group was 2.45%, whereas the relative abundances of important hydrogen-trophic methane-related enzymes involved in the experimental group supplemented with C4-HSL, C6-HSL, C8-HSL and O-C6-HSL were 2.78%, 2.50%, 2.78% and 2.78%, respectively. The relative abundance of hydrogen-trophic methane-related enzymes in all the experimental groups was greater than that noted in the control group. These findings indicate that the addition of signal molecules could enhance the methane-producing pathway of hydrogen-trophic AnGS. Acetate kinase (EC: 2.7.2.1), phosphoacetyltransferase (EC: 2.3.1.8), acetyl coenzyme A decarboxylase/synthase complex (ACDs) and acetyl coenzyme A ligase (EC: 6.2.1.1) are key enzymes in the acetic methanogenic pathway. In the control group, the total number of genes involved in the methane-producing pathway of acetic acid was 0.65%, whereas the sums of the genes involved in the methane-producing pathway of acetic acid were 0.73%, 0.68%, 0.73%, and 0.71% for the C4-HSL, C6-HSL, C8-HSL and 3O-C6-HSL treatments, respectively. The gene abundance of the methane-producing pathway in the experimental group was greater than that in the control group, indicating that the methane-producing pathway of acetic acid in the reactor could be enhanced through the addition of signal molecules. The addition of AHLs enhanced both methanogenic pathways, indicating that AHLs can enhance the methanogenic efficiency of AnGS. Microbial diversity analysis showed that the proportion of Methanobacterium in the reactor with C6-HSL was less than that in the control group, and the proportion of Methanosaeta in the reactor with C4-HSL and 3O-C6-HSL was less than that in the control group. That's probably because the total microbial abundance of anaerobic granular sludge increased after the addition of AHLs, resulting in the reduction of the proportion of methanogenic bacteria in the microbial community. In conclusion, the addition of AHLs can improve the specific methane-producing activity of AnGS by enhancing the methane metabolism pathway of sludge.
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