Open Access Article
David Piedrabuenaad,
Ángel Rumberob,
Elísabet Pires
c,
Alejandro Leal-Duaso
c,
Concepción Civera
d,
María Fernández-Lobato*a and
María J. Hernaiz
*d
aCentro de Biología Molecular Severo Ochoa (CBMSO; UAM-CSIC), Departamento de Biología Molecular, Facultad de Ciencias, Universidad Autónoma de Madrid, Nicolás Cabrera 1, 28049 Madrid, Spain. E-mail: mfernandez@cbm.uam.es
bDepartamento de Química en Ciencias Farmacéuticas, Universidad Complutense de Madrid, Plaza Ramón y Cajal s/n, 28040 Madrid, Spain
cDepartamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, Francisco Tomás y Valiente 7, 28049 Madrid, Spain
dDepartamento de Química Orgánica, Facultad de Ciencias, Universidad de Zaragoza-Instituto de Síntesis Química y Catálisis Homogénea (ISQCH-CSIC), 50009 Zaragoza, Spain. E-mail: mjhernai@ucm.es
First published on 9th July 2021
The β-fructofuranosidase from the yeast Schwanniomyces occidentalis (Ffase) produces potential prebiotic fructooligosaccharides (FOS) by self-transfructosylation of sucrose, being one of the highest known producers of 6-kestose. The use of Green Solvents (GS) in biocatalysis has emerged as a sustainable alternative to conventional organic media for improving product yields and generating new molecules. In this work, the Ffase hydrolytic and transfructosylating activity was analysed using different GS, including biosolvents and ionic liquids. Among them, 11 were compatible for the net synthesis of FOS. Besides, two glycerol derivatives improved the yield of total FOS. Interestingly, polyols ethylene glycol and glycerol were found to be efficient alternative fructosyl-acceptors, both substantially decreasing the sucrose fructosylation. The main transfer product of the reaction with glycerol was a 62 g L−1 isomeric mixture of 1-O and 2-O-β-D-fructofuranosylglycerol, representing 95% of all chemicals generated by transfructosylation. Unexpectedly, the non-terminal 2-O fructo-conjugate was the major molecule catalysed during the process, while the 1-O isomer was the minor one. This fact made Ffase the first known enzyme from yeast showing this catalytic ability. Thus, novel fructosylated compounds with potential applications in food, cosmetics, and pharmaceutical fields have been obtained in this work, increasing the biotechnological interest of Ffase with innocuous GS.
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1 ratio), as well as small traces of the disaccharide blastose by direct fructosylation of glucose.4,5 Indeed, Ffase is one of the highest and more selective known producers of 6-kestose from sucrose.2 FOS, in which one to three fructosyl moieties are linked to a sucrose scaffold, act as prebiotics exerting a beneficial effect on human health. Besides, FOS are attractive substitutes for sugar because they are generally sweet, low in calories, and non-cariogenic.6,7 Ffase also showed high fructosyl-acceptor promiscuity, being able to fructosylate 17 different hydroxylated compounds, including small sugars and alditols, to produce new fructo-conjugates. The best alternatives to sucrose as an acceptor were mannitol and erythritol, that accordingly generated 1-O-β-D-fructofuranosyl-D-mannitol and 1/4-O-β-D-fructofuranosyl-D-erythritol.4 Sugar alcohols are extensively used in food as sweeteners and bulking agents, so their transglycosylation has always been of great interest to improve either their functional properties (particularly the solubility, stability, and flavor) or their bioavailability to reach the large intestine.8–10
The Ffase 3D structure has been elucidated as a homodimer of 160 kDa, each subunit included in the glycoside hydrolase family 32 (GH32) and with a β-sandwich domain involved in substrate binding.3,11 The protein sequence contains serine instead of leucine at position 196 by non-universal decoding of the leucine codon CUG.12 Substitution of this Ser residue for Leu (ScFfase-Leu196) decreased ∼1000-fold the Ffase apparent sucrose-catalytic efficiency (kcat/Km); but, surprisingly, enhanced its transferase activity by almost 3-fold, as well as its specificity towards the synthesis of especially 6-kestose and, to a lesser extent neokestose, without significant production of 1-kestose.12 Usually, the transferase/hydrolase ratio of those GH showing these two activities depends largely on factors such as the intrinsic nature of the enzyme, acceptor/donor concentrations, and physico-chemical conditions of the reaction media.4,13,14
In this context, the so-called green solvents (GS) are acquiring increasingly relevance compared to classical organic ones to improve the yield and selectivity of enzymatic reactions in an economical, health-safe, and environmentally-friendly manner. This type of solvents encompasses, among others, ionic liquids (IL) mainly composed of imidazole or alkylammonium salts, polyols, carbonyl compounds, organic polymers, and biomass-based chemicals (biosolvents). This latter group chiefly includes different derivatives from carbohydrates, vegetable oils, short-chain carboxylic acids, glycerol, and phenols.15–18 Glycerol ethers were already successfully used, both with or without biocatalysts, to hydrotropically increase the solubility of limiting substrates or to modify the selectivity towards alternative acceptors.16,17,19–21 In general, short-chain polyols are the most common solvents in nature to prevent denaturation and loss of protein activity.22 Effects such as alterations in the spatial arrangement of proteins that improves their active center flexibility, removal of hydrogen-bonded water molecules from strongly hydrated acceptors, or changes in electrostatic interactions could be involved in this process.14,16,22 Until now, the catalytic effect exerted by solvents has been poorly examined in yeast enzymes. For example, β-fructofuranosidases from Saccharomyces cerevisiae and Candida utilis showed satisfactory activity with some alditols, including glycerol and sorbitol,22,23 and that from Cryptococcus laurentii with DMSO, DMF, or acetone.24
In this work, the activity of Ffase from Schwanniomyces occidentalis was analysed over sucrose in reactions including different GS. The implication of selected solvents in the production of fructosylated compounds was also evaluated.
To analyze this enzymatic activity in the additional presence of GS, a screening was carried out on 56 different solvents.
This selection included some conventional organic compounds, IL, and a set of synthetic derivatives from biomass-origin; all of which were either miscible or immiscible in water. Fig. 2 illustrates the chemical structure of the synthesized biosolvents used in this work and Table S1 in the ESI† some of their physico-chemical characteristics. None of the tested miscible solvents, regardless of their type, were beneficial for sucrose self-transfructosylation (Fig. 3a).
The total amount of kestoses obtained in all cases was very small or even negligible when compared to the control, showing relative transfer efficiencies much less than 1.0. Besides, the hydrolytic capacity of Ffase was also negatively affected, excepting for EMIM-MeSO4, which improved it by about 32%. In general, the Ffase activity was shown to be much more compatible with immiscible solvents (Fig. 3b), which seems to be somewhat paradigmatic of some microbial glycosidases.25–27 Indeed, five solvents, namely, GCL17, GCL18, BMIM-FAP, BMIM-Tf2N, and HMIM-Tf2N, enhanced the hydrolytic Ffase activity by about 9–23%, and transfer products were detected in most assays. Furthermore, the yield of total kestoses was almost identical (or somehow similar) to the control in nearly half of the reactions, such as in the case of GCL12, DMA6, BMIM-PF6, OMIM-PF6, or TROMA-Tf2N; and even increased by 34–40% when GCL17 and GCL20 were employed. The use of these two fluorinated glycerol ethers involved a relative transfer efficiency of 1.2 and 1.8, respectively, which means an improvement of fructosylation rate over sucrose hydrolysis in relation to control. These results were consistent with those previously obtained with other glycosylases. Thus the β-galactosidase-3 from Bacillus circulans showed excellent catalytic activity in the presence of fluorinated glycerol ether derivatives,28 and a mutated variant of the α-galactosynthase TmGalA from Thermotoga maritima with the solvent GCL17.29 This fact shows the possible benefit of this type of compounds in promoting or optimizing the occurrence of certain transglycosylation reaction.
As seen, Ffase activity was clearly affected by the medium in which the enzymatic reaction takes place, and therefore the conformational state of the enzyme must be somehow altered. This assumption was in accordance with data obtained from a preliminary protein fluorimetric study at 295 nm excitation wavelength (tryptophan maximum absorption), in which three different nonsinkable solvents causing a highly detrimental, GCL5; almost neutral, GCL12; or slightly beneficial, TROMA-Tf2N, effect on Ffase catalytic activity were analyzed (Fig. S1 in the ESI†). This set of solvents was previously proven to be representative while not interfering with the appropriate process itself of protein fluorescence recording. The obtained emission spectra correlated with certain changes in the disposition of tryptophan protein groups, which were linked to conformational alterations with varying impact on the enzyme activity. GCL5 at increasing concentrations causes the enzyme to change its maximum intensity emission peak from 326 nm to 332 nm, a red shift, which is interpreted as greater exposure of tryptophan residues to the surrounding polar environment and therefore more extensive protein denaturation or enzymatic inactivity. On the contrary, GCL12 and TROMA-Tf2N caused a shift of the maximum emission wavelength towards the blue, from 326 nm to 320 nm, suggesting an increased packing of the tryptophan groups into the internal non-polar environment of the protein and thus higher integrity and maintenance of enzyme structure and activity.28,30 This circumstance may be particularly relevant for Ffase as it has two tryptophan residues (Trp-76 and Trp-314) in its active center involved in the recognition of fructose moiety.3 In addition, Ffase contains almost 47% of hydrophobic amino acids (with ∼83% aliphatic index),3 which could be a determining factor for explaining its better stability in non-polar environments.
Indeed, the size of the peaks corresponding to kestoses was greatly reduced in favor of the new ones. This fact suggested that Ffase could also use these two hydroxylated compounds as alternative fructosyl-acceptors, therefore generating novel fructo-conjugates.
The relative acceptor efficiencies for glycerol and ethylene glycol measured as the molar ratio between the concentrations of new fructosylated products derived from these solvents (accordingly, 53.17 and 53.32 mM) and of FOS from sucrose (1.84 and 1.01 mM) were widely higher than 1.0 in both cases.
The possible fructosylation of glycerol is of enormous relevance and biotechnological interest. This compound is a sweet-tasting, hygroscopic, and viscous polyol with more than 2000 described applications.20,31 It is extensively used in the obtention of numerous pharmaceutical, food, and domestic products usually as humectant, solvent, thickening, or plasticizer agent.31–35 Glycerol is also employed as a conventional sugar substitute additive (E422), mild laxative, ocular hypotensive, or cryoprotectant.31–33,35 Besides, multiple microbial biotransformations and chemical synthesis pathways, most notably, nitroglycerine or epichlorohydrin, are based on this substrate.31,34,36 Interestingly, this polyol might even be useful for cancer therapy as an activator of negative mutant p53, and for energy production as a precursor of diverse biofuels and additives thereof.37,38 In that sense, the glycosylation of glycerol could improve certain functional properties that make it valuable, especially, its solubility, stability, and sweetness; as well as its bioavailability.4,39
In addition, glycerol is generated on a large scale (about 900
000 metric tonnes per year) as a common by-product from soap manufacturing, petroleum refining, and molasses fermentation.31,33,34,36,40 Consequently, finding novel and clean processes to convert this compound into new molecules with a higher added value may allow the optimization of its integral use and the achievement of greater profitability to guarantee the sustainability of the industry and the environment.34,36,40 Indeed, this type of glyco-conjugates has been projected as moisturizers, protein stabilizers, oral hypoglycemic drugs, Epstein-Barr virus inhibitors, or even anti-tumor agents.41–43 Certain glycerol glycosides have already been purified from osmotolerant species of higher plants, algae, and microbial extracts;41,44–46 however, until now very little is known concerning their in vitro production. Unlike the invertase SftA from Aspergillus sydowii that did not show to transfer fructose to glycerol,47 Ffase was able to do so. Thereby, and as far as we know, Ffase is the first reported mycotic β-fructofuranosidase with the ability to synthesize a fructosylated derivative from glycerol.
Based on this analysis two novel regioisomeric structures with an estimated molecular weight of 254.24 g mol−1 each (C9H18O8) were detected, specifically, 1-O-β-D-fructofuranosylglycerol and 2-O-β-D-fructofuranosylglycerol in a proportion of 40% and 60%, respectively. This finding confirmed the biotechnological utility of Ffase as the first known enzyme from yeasts able to synthesize such glycerol derivatives. A mixture of 1/2-O-β-D-fructosyl glycerol was also previously obtained by using levansucrases from Bacillus circulans and B. subtilis (SacB) in reactions containing sucrose and glycerol.48,49 Moreover, the β-fructofuranosidase I (MsFfase) from Microbacterium saccharophilum K-1 (formerly known as Arthrobacter sp. K-1) was shown to fructosylate glycerol and other polyols, but the structure of the products so generated were not characterized.50 Peculiarly, Ffase exhibited a marked bias for glycosylating the secondary hydroxyl group of glycerol, unlike other microbial enzymes, including the aforementioned Bacillus ones. Thus, the α-glucosidase HaG from Halomonas sp. H11 as well as the β-glucosydase CelB from Pyrococcus furiosus and SSG from Sulfolobus shibatae predominantly bound a glucose unit to the terminal OH groups of glycerol.42,44,45 Similarly, only the primary hydroxyl groups of different polyols (other than glycerol) were fructosylated when using the β-fructofuranosidase from the yeast Cryptococcus laurentii.24 The same was also observed for Ffase in reactions including mannitol or erythritol.4 Perhaps, in this case, the secondary hydroxyl group of glycerol is more accessible than the primary one to be preferentially fructosylated by Ffase because of the high flexibility of this small tri-alcohol in aqueous phase and a combination of both intramolecular hydrogen bonds and intermolecular hydroxyl groups solvation.31
| Suc (g L−1) | Gcl (g L−1) | Suc/Gcl ratio | Kes (g L−1) | Fru-Gcl (g L−1) | Kes/Fru-Gcl ratio |
|---|---|---|---|---|---|
| a Suc: sucrose; Gcl: glycerol; Kes: total kestoses; and Fru-Gcl: 1/2-O-β-D-fructofuranosyl-glycerol. Each data represents the average of two independent measurements at the reaction time in which the amount of transfer products reach their maxima: 2, 4, 5.5, 20, 3.5, 5, 10 and 336 h for (a), (b), (c), (d), (e), (f), (g) and (h); respectively. Standard deviations were lower than 5%. | |||||
| Ffase | |||||
| 200 | 200 | 1/1(a) | 3.08 | 31.17 | 1/10 |
| 200 | 400 | 1/2(b) | 1.19 | 36.44 | 1/31 |
| 200 | 600 | 1/3(c) | 0.45 | 18.49 | 1/41 |
| 200 | 800 | 1/4(d) | 0.06 | 3.27 | 1/55 |
| 300 | 300 | 1/1(e) | 2.77 | 45.48 | 1/16 |
| 300 | 600 | 1/2(f) | 0.55 | 19.12 | 1/35 |
| 400 | 400 | 1/1(g) | 2.52 | 61.74 | 1/25 |
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| ScFfase-Leu196 | |||||
| 400 | 400 | 1/1(h) | 3.13 | 71.97 | 1/23 |
Presumably, the high competence exerted by sucrose and glycerol for gaining access to the catalytic site of Ffase somehow limited the highest yield of transfructosylation since the fructosyl-glycerol increase was correlated with a total FOS decrease. However, when using the protein variant Leu196 of Ffase (ScFfase-Leu196), which a priori showed enhanced transferase activity by almost 3-fold,12 the concentration of both fructosyl-glycerol and kestoses increased by about 1.2 times each (Table 1), but at the expense of a significant increase in the reaction time (336 h vs. 10 h).
In this context, 78 g L−1 of fructosyl-glycerol were previously obtained by using levansucrases from Bacillus circulans or B. subtilis in solutions containing 280 g L−1 sucrose and 500 g L−1 glycerol,48,49 and up to 13 g L−1 of this compound when using the β-fructofuranosidase I from Microbacterium saccharophilum K-1 in 103 g L−1 sucrose and 92 g L−1 glycerol reactions.50 Clearly glycerol is a good fructosylable substrate for Ffase considering that the obtained amount of fructosyl-glycerol (∼62 g L−1) exceeded the already published 44 g L−1 of fructosyl-mannitol and the 35 g L−1 of fructosyl-erythritol generated from mannitol and erythritol, respectively,4 as well as the yield of other yeast β-fructofuranosidases able to use alternative glycosidic acceptors, such as the Xd-INV from Xanthophyllomyces dendrohous, which produced in the best case analysed about 38 g L−1 of neo-erlose from maltose.51
The maximum production of fructosyl-glycerol and kestoses was reached after 10 h. At this point, sucrose and glycerol conversions were, respectively, of about 39% and 6% (w/w), referred to the total amount of substrates and products of the mixture. Furthermore, the reaction mixture contained 34.8 g L−1 fructose, 81.4 g L−1 glucose, 243.1 g L−1 sucrose, 376.7 g L−1 glycerol, 61.7 g L−1 fructosyl-glycerol, 2.5 g L−1 total FOS (of which 1.74 g L−1 6-kestose, 0.44 g L−1 1-kestose, and 0.37 g L−1 neokestose), together with 0.5 g L−1 blastose and minimal traces of some unidentified products. This outcome means fructosyl-glycerol was by far the major transfer product present in this reaction mixture, accounting for around 7.7% (w/w) of all compounds thereof (including polyols), and 95.3% (w/w) of all generated fructo-conjugates. Besides, the ratio between kestoses and fructosyl-glycerol was found to be 1
:
25. Interestingly, the glycosidic linkage formed between the fructosyl unit and glycerol seemed to be hydrolysis-resistant and stable under the assay conditions. Thereby, the concentration of fructosyl-glycerol continuously increased until it reached a plateau beyond 10 h of reaction. This behavior contrasts with the typical FOS formation dynamic observed in previous works with this enzyme, whose concentration reached a maximum peak followed by a rapid hydrolysis process.2,4 Hence, Ffase has proven to be an excellent tool for catalysing in a non-pollutant way a novel fructosylated derivative from glycerol with biotechnological potential. The applicability of this reaction would be even enhanced by trying to carry out the whole process directly in yeast cultures supplemented with sucrose and glycerol, a future goal that we could address. Further research into the isolation and characterization of the major transfer product from ethylene glycol will also help us to understand the peculiar activity of Ffase and to find additional utilities for this enzyme. Likewise, a prospective structural study of the underlying interaction between Ffase and these new alternative acceptors would contribute to shed light on the determinants responsible for its transferase activity.
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1) as eluent. UV-lamp light, spraying with 10% H2SO4 in MeOH, and oven heating were used for compounds visualization. Precise analytical determination of products was performed by HPLC. The equipment consisted of a quaternary pump (Jasco Inc.; Easton, USA) with a manual injection valve (Agilent Technologies; Santa Clara, USA) coupled to a Asahipak-NH2P-50-4E amino column (4.6 mm × 250 mm, 5 μm) from Shodex (Showa Denko Europe GmbH; Munich, Germany) followed by an evaporative light-scattering detector (Softa Corp.; Westminster, USA). Acetonitrile/water (8
:
2) degassed by bath sonication was used as a mobile phase at 0.8 mL min−1 flow. The column was kept at room temperature, while the detector was equilibrated at 54 °C with a constant supply of 50-psi molecular nitrogen as nebulizer gas. Before injection, each sample was diluted with deionized water and passed through a Branchia 0.22 μm nylon syringe filter (Dismadel S.L.; Madrid, Spain). Data obtained after 65 min total analysis time were processed by Borwin software (v. 1.5; Jasco Inc.). All compounds were correspondingly identified and quantified on the basis of the retention time and integrated area of detected chromatographic peaks. Calibration curves in a 0.02–0.75 g L−1 range were first generated using high-purity fructose, glucose, sucrose, 1-kestose, nystose, glycerol, and ethylene glycol. In addition, 6-kestose, neokestose, and blastose, which were previously synthesized from sucrose by β-fructofuranosidases as referred before,4,5 were also employed to ensure appropriate peak assignation. When standards could not be obtained commercially, the same detector response factor of the most related available compound was assumed. Thus, the concentration of blastose and novel fructosylated derivatives from ethylene glycol and glycerol was estimated considering the sucrose calibration, and every FOS type of three sugar units as 1-kestose. Each analysis was conducted at least in duplicate.
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: 10.1039/d1ra01391b |
| This journal is © The Royal Society of Chemistry 2021 |