Open Access Article
Zhenhua Gao,
Junchen Li,
Yunyang Song,
Xiaojing Bi,
Xiangyan Meng* and
Yongbiao Guo
*
State Key Laboratory of NBC Protection for Civilian Research Beijing, 102205, P. R. China. E-mail: van87120@126.com
First published on 26th October 2020
(+)-Crambescin A belongs to the polycyclic guanidine natural product family and has been shown to possess various medically important properties. The chiral bicyclic guanidine structure of (+)-crambescin A presents a challenge for chemical synthesis. Here we implement a novel asymmetric Biginelli reaction strategy to achieve the enantiospecific total synthesis of (+)-crambescin A in only 8 steps from the abundant and inexpensive aliphatic aldehyde, urea and methyl 3-oxobutanoate.
For this family of natural products, a plethora of biological evaluations were done. Synthesis is necessary to secure the access to the molecules as the sponges are not widely accessible and to anticipate an alternative production to preserve fragile marine ecosystems. Only three years after crambescin A–C were isolated, the racemic synthesis of crambescin A–C was reported by Snider.12 More recently, a racemic synthesis of crambescin A was reproted by Thomas and co-workers employing a tethered Biginelli-like reaction between C-2/C-3 activated fatty acids and a central guanidinylated pyrrolinium.13 However, the asymmetric synthesis of crambescin A–C has not been reported. It was not until 2016 that the first asymmetric route to crambescin A–C derivatives (crambescin A–C carboxylic acid) was delineated by Nishikawa and co-workers.9 A cis-enyne (2, Scheme 1) was epoxidized using the Katsuki asymmetric epoxidation to give epoxide (3) and then product recrystallization allowed to reach >99% ee. Epoxide (3) was transformed to the chiral spirocyclic guanidine structure (5) via bromocation-triggered cascade cyclization reaction. Then, subsequent functional group transformations from 6 resulted in the total synthesis of crambescin A carboxylic acid (16 steps from 2, 0.9% total yield), crambescin B carboxylic acid (15 steps from 2, 8.7% total yield) and crambescin C carboxylic acid (15 steps from 2, 4.5% total yield), respectively. Although this achievement is significant, the practicality of this route is questionable because of lower overall yields (0.9–8.7%) and the requirement for a large number of linear synthetic steps (15–16 steps).
As we are interested in the unique structure of the crambescins, we planned to synthesize the crambescins by a novel strategy. Herein, we report an enantioselective total synthesis of (+)-crambescin A (1) based upon a strategy involving successive Biginelli reaction of aliphatic aldehyde.
As an approach to the synthesis of crambescin A (1), it seemed reasonable to couple the bicyclic guanidine carboxylic acid 8 with the side-chain alcohol 9 by means of an esterification at the final stage of the synthesis (Scheme 2). Compound 8 can be synthesized from the optically active intermediate 10 through four steps, including thionation, S-ethylation, guanidination and Boc protection. The intermediate 10 can be obtained from the key intermediate 11 by employing the C–C and C–N coupling/cyclization cascade reaction. The key intermediate 11 is a kind of 4-alkyl-3,4-dihydropyrimidin-2(1H)-ones (4-alkyl-DHPMs), which can be synthesized by the enantioselective Biginelli reaction of urea, ethyl acetoacetate, and octanal.
| Entry | Catalyst | Solvent | Time (d) | Yieldb (%) | eec (%) |
|---|---|---|---|---|---|
| a Reactions conditions: 12 (0.2 mmol), 13 (1.5 mmol), 14 (0.24 mmol) and a catalyst (0.002 mmol) in solvent (2 mL) for 5–10 days (25 °C).b Yield was determined by HPLC analysis.c Determined by HPLC (Chiralcel AD-RH).d The reactions was run with 12 (0.1 mol), 13 (0.75 mol), 14 (0.12 mol) and cat.2 (0.001 mol) in BrCH2CH2Cl (100 mL) at 25 °C for 7 days. | |||||
| 1 | cat.1 | CHCl3 | 10 + 1 | 75 | 85 |
| 2 | cat.2 | CHCl3 | 10 | 71 | 89 |
| 3 | cat.3a | CHCl3 | 5 | 26 | 46 |
| 4 | cat.3b | CHCl3 | 5 | 70 | 72 |
| 5 | cat.3c | CHCl3 | 5 | 39 | 0 |
| 6 | cat.3d | CHCl3 | 5 | 49 | 15 |
| 7 | cat.3e | CHCl3 | 5 | 44 | 58 |
| 8 | cat.2 | CHCl3 | 7 | 50 | 59 |
| 9 | cat.2 | CH2Cl2 | 7 | 60 | 90 |
| 10 | cat.2 | CCl4 | 7 | 68 | 78 |
| 11 | cat.2 | Toluene | 7 | 50 | 94 |
| 12 | cat.2 | ClCH2CH2Cl | 7 | 73 | 91 |
| 13 | cat.2 | BrCH2CH2Cl | 7 | 85 | 91 |
| 14 | cat.2 | Benzene | 7 | 54 | 82 |
| 15 | cat.2 | Xylene | 7 | 52 | 81 |
| 16d | cat.2 | BrCH2CH2Cl | 7 | 85 | 91 |
With large quantities of optically active 4-alkyl-DHPM 11 in hand, we next examined the conversion of 11 into the bicyclic dihydropyrimidinone 10 through the C–C and C–N coupling/cyclization cascade reaction. Initially, we envisaged that C–C and C–N coupling/cyclization cascade reaction of 11 with 1,2-dibromoethane by the Singh16,17 method would afford 10. However, the yield of bicyclic intermediate 10 was very low (10%). Thus, several bases and electrophiles for this conversion were further investigated, and the results are summarized in Table 2. The best yield (42%, 71% conv.) was obtained when 5.0 equivalents of n-BuLi and 5.0 equivalents of 1-bromo-2-chloroethane were used. Control experiments performed by chiral HPLC indicated that no erosion of the ee occurred during the cyclization process.
| Entry | Catalyst | Solvent | Yieldb (%) | Conversion (%) |
|---|---|---|---|---|
| a Reagents and conditions: 11 (0.5 mmol), base (1.75–3.0 mmol), dry THF (5 mL), −20 °C – r.t., 1 h, then 1,2-dibromoethane or 1-bromo-2-chloroethane (2.5 mmol), r.t. 3 h.b Isolated yield. | ||||
| 1 | n-BuLi (3.5) | 1,2-Dibromoethane | 10 | — |
| 2 | n-BuLi (3.5) | 1-Bromo-2-chloroethane | 34 | 65 |
| 3 | n-BuLi (4.0) | 1-Bromo-2-chloroethane | 38 | 61 |
| 4 | n-BuLi (5.0) | 1-Bromo-2-chloroethane | 42 | 71 |
| 5 | n-BuLi (6.0) | 1-Bromo-2-chloroethane | 40 | 64 |
| 6 | LDA (5.0) | 1-Bromo-2-chloroethane | 38 | 58 |
| 7 | LiHMDS (5.0) | 1-Bromo-2-chloroethane | Trace | — |
Compound 10 could be treated directly with ethylation reagent (Et3O+BF4−), leading to ethoxypyrimidine 15, which was then converted to bicyclic guanidine 16 via guanidination reaction with ammonium propionate. However, the total yield (53%) of two steps was not satisfactory owing to formation of the side product 10 in the guanidination step. So we decided to prevent its formation by substituting sulfur atom for oxygen atom to avoid the side reaction. Dihydropyrimidinthione 17 was generated in quantitative yield by treatment of 10 with Lawesson's reagent. By following the same procedure of 10, we were pleased that the yield of 16 could be increased to 81% from 10 (Scheme 3).
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| Scheme 3 Reagents and conditions: (a) Et3O+BF4−, NaHCO3, dry CH2Cl2, r.t., 1 h; (b) NH4+EtCO2−, 80 °C, 3 h; (c) Lawesson's reagent, xylene, 120 °C, 2 h, 95%. | ||
The last three steps completed the total synthesis of crambescin A (Scheme 4). Treatment of the bicyclic guanidine 16 with (Boc)2O in the presence of NaH and DMAP gave the fully protected bicyclic guanidine 19. Then, demethylation of 19 with EtSLi and subsequent condensation with the guanidine alcohol 9 provided the fully protected crambescin A 20. Finally, CF3CO2H promoted removal of the four Boc groups, furnishing the targeted crambescin A (only 8 steps, 10.7% total yield). All of the analytical data including 1H, 13C, 2D NMR, and [α]D value of the synthetic 1 were identical to those of the natural product (Tables S1 and S2†).11
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| Scheme 4 Reagents and conditions: (a) NaH, dry THF, 0 °C, then DMAP, (Boc)2O, r.t.; (b) EtSLi, HMPA, r.t., then BOPCl, NEt3, dry CH2Cl2, r.t.; (c) CF3CO2H, dry CH2Cl2. | ||
:
1)] to afford 11 (22.8 g, 85%) as a white crystalline solid. Then the optically pure 11 were obtained in 88% yield with 99% ee by recrystallization from MeCN. m.p. 128–130 °C; 1H NMR (600 MHz, CDCl3): δ (ppm) 8.27 (s, 1H), 5.87 (s, 1H), 4.28 (dt, J = 7.8 Hz, 3.6 Hz, 1H), 3.71 (s, 3H), 2.27 (s, 3H), 2.27 (s, 3H) 1.57–1.48 (m, 2H), 1.38–1.25 (m, 10H), 0.87 (t, J = 6.6 Hz, 3H). 13 C NMR (150 MHz, CDCl3): δ (ppm) 166.4, 154.6, 147.0, 101.4, 51.6, 51.1, 36.9, 31.8, 29.3, 29.2, 24.4, 22.6, 18.6, 14.1. HRMS (m/z) calcd for C14H25N2O3 [M + H]+ 269.1860, found 269.1862; [α]D25 = +140 (c = 0.30, CH2Cl2); The ee was determined by HPLC analysis (Chiralpak OD-RH, CH3CN/H2O = 60/40, v/v, 1.0 mL min−1, 280 nm, tR (minor) = 3.4 min, tR (major) = 5.1 min), 99% ee.
:
1)] to obtain 10 (247 mg, 42%) as a colorless oil. 1H NMR (600 MHz, CDCl3): δ (ppm) 5.48 (s, 1H), 4.27 (dt, J = 7.2 Hz, 3.6 Hz, 1H), 3.71 (s, 3H), 3.72–3.65 (m, 2H), 3.20 (ddd, J = 18.0 Hz, 8.0 Hz, 4.2 Hz, 1H), 3.00 (dt, J = 18.0 Hz, 8.0 Hz, 1H), 2.06–1.91 (m, 2H), 1.55–1.48 (m, 2H), 1.38–1.24 (m, 10H), 0.86 (t, J = 7.2 Hz, 3H). 13C NMR (150 MHz, CDCl3): δ (ppm) 166.2, 153.9, 153.1, 98.4, 51.9, 51.0, 46.6, 37.1, 31.9, 31.8, 29.2, 29.2, 24.4, 22.6, 21.4, 14.1. HRMS (m/z) calcd for C16H27N2O3 [M + H]+ 295.2016, found 295.2029; [α]D25 = +146 (c = 0.2, CH2Cl2); the ee was determined by HPLC analysis (Chiralpak OD-H, CH3CN/H2O = 60/40, v/v, 1.0 mL min−1, 280 nm, tR (minor) = 5.5 min, tR (major) = 6.9 min), 99% ee.
:
1)] to obtain 17 (236 mg, 95%) as a colorless oil. 1H NMR (600 MHz, CDCl3): δ (ppm) 6.96 (s, 1H), 4.28 (dt, J = 7.5, 3.6 Hz, 1H), 4.01 (ddd, J = 9.1, 5.5, 3.4 Hz, 2H), 3.73 (s, 3H), 3.30 (ddd, J = 18.2, 8.5, 3.6 Hz, 1H), 2.99 (dt, J = 18.4, 9.3 Hz, 1H), 2.06 (ddt, J = 12.9, 10.8, 4.0 Hz, 1H), 2.00–1.89 (m, 1H), 1.53 (dddd, J = 24.4, 14.1, 8.5, 3.9 Hz, 2H), 1.39–1.25 (m, 10H), 0.87 (t, J = 7.0 Hz, 3H). 13C NMR (150 MHz, CDCl3): δ (ppm) 176.3, 165.9, 150.4, 100.4, 52.0, 51.9, 51.4, 36.9, 32.0, 31.8, 29.2, 29.1, 24.1, 22.6, 21.1, 14.1. HRMS (ESI) m/z calcd for C16H27N2O2S [M + H]+: 311.1793; found 311.1788. [α]D25 = +240 (c = 0.30, CH2Cl2).
:
1)] to obtain 18 (225 mg, 95%) as a colorless oil. 1H NMR (600 MHz, CDCl3): δ = 4.62 (s, 1H), 3.72–3.69 (m, 1H), 3.68 (s, 3H), 3.51 (dt, J = 16.8, 8.5 Hz, 1H), 3.21 (ddd, J = 17.9, 8.4, 1.9 Hz, 1H), 3.14 (s, 1H), 2.96 (s, 1H), 2.85 (dt, J = 15.9, 9.3 Hz, 1H), 2.07–2.03 (m, 1H), 1.98–1.91 (m, 1H), 1.47–1.39 (m, 3H),1.34–1.25 (m, 12H), 0.86 (t, J = 7.2 Hz, 3H).13C NMR (150 MHz, CDCl3): δ = 167.4, 153.9, 150.5, 97.2, 55.9, 50.8, 48.4, 37.2, 31.9, 30.9, 29.7, 29.6, 29.3, 25.4, 24.7, 22.6, 22.0, 14.3, 14.1. HRMS: m/z calcd for C18H31N2O2S [M + H]+: 339.2106; found: 339.2114.
:
10
:
1)] to obtain 16 (TFA salt, 183 mg, 90%) as a colorless oil. 1H NMR (600 MHz, CDCl3): δ (ppm) 10.12 (s, 1H), 4.43 (s, 1H), 3.87(t, J = 8.4 Hz 1H), 3.75 (s, 3H), 3.69 (dd, J = 11.4 Hz, 8.4 Hz, 1H), 3.33 (ddd, J = 18.0 Hz, 8.4 Hz, 3.0 Hz, 1H), 2.94 (dt, J = 18.6 Hz, 9.6 Hz, 1H), 2.25–2.19 (m, 1H), 2.13–2.06 (m, 1H), 1.58–1.48 (m, 2H), 1.40–1.25 (m, 10H), 0.87 (t, J = 7.2 Hz, 3H). 13C NMR (150 MHz, CDCl3): δ (ppm) 165.1, 152.0, 150.4, 102.3, 51.6, 50.1, 47.4, 36.7, 31.7, 30.7, 29.1, 29.0, 23.9, 22.6, 21.8, 14.0. HRMS (m/z) calcd for C16H28N3O2 [M + H]+ 294.2176, found 294.2177; [α]D25 = +50 (c = 0.30, MeOH, TFA salt).
:
1)] to obtain crude 19 (162 mg, 82%, crude yield) as a colorless oil. Then, to crude 19 (0.328 mol) was added a solution of EtSLi in HMPA (3 mL of a 1.6 M solution). After stirring at 25 °C for 2 h, the reaction was quenched with a saturated solution of NH4Cl (0.3 mL) and diluted with Et2O (50 mL). After washing H2O (5 × 30 mL), the combined aqueous layer was acidified to pH 3 with 0.1 N HCl and extracted with Et2O (2 × 50 mL). The combined organic layers were then washed with 0.1 N HCl (3 × 30 mL), dried over anhydrous Na2SO4 and filtered. After the excess solvent was evaporated, the crude carboxylic acid was obtained. A mixture of crude carboxylic acid, guanidine alcohol 9 (0.5 mmol), BOPCl (0.5 mmol), Et3N (15 mmol) and dry CH2Cl2 (5 mL) was stirred at 25 °C for 15 h. Then the resulting solution was concentrated under reduced pressure, and the orange residue was purified by column chromatography [eluting with hexane/EtOAc (4
:
1)] to afford 20 (180 mg, 57%) as a colorless oil. 1H NMR (600 MHz, CDCl3): δ (ppm) 11.50 (s, 1H), 8.37 (s, 1H), 5.21 (dd, J = 8.4 Hz, 4.2 Hz, 1H), 4.20–4.12 (m, 2H), 3.95 (dd, J = 12.0 Hz, 7.8 Hz, 1H), 3.73 (ddd, J = 12.0 Hz, 8.4 Hz, 4.2 Hz, 1H), 3.49–3.44 (m, 2H), 3.22 (ddd, J = 18.0 Hz, 8.4 Hz, 4.2 Hz, 1H), 2.91 (dt, J = 18.0 Hz, 9.0 Hz, 1H), 2.08–2.04 (m, 1H), 2.01–1.95 (m, 1H), 1.75–1.66 (m, 4H), 1.63–1.57 (m, 1H), 1.51 (s, 9H), 1.50 (s, 9H), 1.49 (s, 9H), 1.48 (s, 9H), 1.40–1.36 (m, 1H), 1.30–1.23 (m, 10H), 0.87 (t, J = 7.2 Hz, 3H). 13C NMR (150 MHz, CDCl3): δ (ppm) 165.1, 158.9, 156.1, 153.3, 152.0, 150.8, 144.8, 103.0, 83.1(2), 79.7(2), 63.6, 52.9, 48.9, 33.6, 31.9, 31.2, 29.2, 29.1, 28.3(3), 28.2(3), 28.1(3), 28.0(3), 26.2, 25.8, 24.8, 22.6, 21.4, 14.1. HRMS (m/z) calcd for C40H69N6O10 [M + H]+ 793.5070, found 793.5084.
:
10
:
1)] to afford (+)-crambescin A (113 mg, 91%, TFA salt) as a colorless oil. 1H NMR (600 MHz, CD3OD): δ (ppm) 4.40 (dd, J = 6.6 Hz, 4.8 Hz, 1H), 4.22 (td, J = 14.4 Hz, 6.6 Hz, 1H), 3.82 (td, J = 8.4 Hz, 1.8 Hz, 1H), 3.67 (dd, J = 16.2 Hz, 9.0 Hz, 1H), 3.35–3.31 (m, 1H), 3.23 (t, J = 7.2 Hz, 2H), 2.99(dt, J = 18.0 Hz, 9.0 Hz, 1H), 2.26–2.18 (m, 1H), 2.15–2.06 (m, 1H), 1.79–1.74 (m, 2H), 1.70–1.66 (m, 2H), 1.62–1.54 (m, 2H), 1.44–1.30 (m, 10H), 0.90 (t, J = 6.6 Hz, 3H). 13C NMR (150 MHz, CD3OD): δ (ppm) 165.9, 158.5, 152.9, 152.6, 103.0, 64.9, 51.1, 48.7, 41.8, 37.2, 32.7, 31.7, 30.1, 30.0, 26.8, 26.4, 25.0, 23.5, 22.7, 14.2. HRMS (m/z) calcd for C20H37N6O2 [M + H]+ 393.2973, found 393.2987. [α]D25 = +13 (c = 0.1, MeOH, TFA salt), Lit:11 [α]D = +10 (c = 0.1, MeOH, TFA salt).
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: 10.1039/d0ra08726b |
| This journal is © The Royal Society of Chemistry 2020 |