Open Access Article
Florence Victoriaabc,
John Manioudakisabc,
Liana Zaroubia,
Brandon Findlaya and
Rafik Naccache
*abc
aDepartment of Chemistry and Biochemistry, Concordia University, Montreal, QC, Canada H4B 1R6. E-mail: rafik.naccache@concordia.ca
bCentre for NanoScience Research, Concordia University, Montreal, QC, Canada H4B 1R6
cQuebec Centre for Advanced Materials, Department of Chemistry and Biochemistry, Concordia University, Montreal, QC H4B 1R6, Canada
First published on 1st September 2020
Chirality remains a critical consideration in drug development and design, as well as in applications of enantioselective recognition and sensing. However, the preparation of chiral nanomaterials requires extensive post synthetic modifications with a chiral agent, coupled with extensive purification. This limits the use and application of chiral nanomaterials. Herein, we report a facile, one-step microwave-assisted synthesis of chiral carbon dots through the reaction of L- and D-cysteine amino acid precursors and citric acid. We modulated the synthetic parameters to preserve and tune the residual chiral properties of the dots and demonstrate that the reaction conditions play a critical role in dictating the chiral behaviour of the dots. Finally, in a proof of concept application we demonstrated that the synthesized carbon dots, particularly D-carbon dots inhibit bacterial growth at a lower concentration than L-carbon dots. By varying bacterial strains and chirality of the carbon dots, concentrations ranging from 0.25–4 mg mL−1 of the nanoparticles were required to inhibit microbial growth. The ability to preserve and tune chirality during synthesis can open up novel avenues and research directions for the development of enantioselective materials, as well as antibacterial films and surfaces.
Chirality has also garnered increasing interest in the field of nanomaterials for applications such as asymmetrical catalysis, enantioselective recognition, and chiral sensing. Several chiral nanomaterial systems have been reported in the literature ranging from inorganic metallic nanoparticles,5–8 semi-conductors9–13 and mesoporous silica,14–17 to organic nanostructures such as polymers,18–20 among others. Chirality has also been explored in carbon-based nanoparticles such as fullerenes,21 carbon nanotubes22–24 and graphene dots.25–27 More recently, chirality has been investigated in carbon dots (CD), one of the more recent members of the carbon allotrope family. CDs are ∼10 nm in size and are quasi-spherical. Typically, they are comprised of predominantly sp2 conjugated hybridized carbons with some sp3 character. They are mainly composed of carbon, oxygen, nitrogen and hydrogen, but may be doped with other heteroatoms (e.g. sulfur) depending on the chemical composition of the starting materials.28–30 The emerging interest in chiral carbon dots stems from the fact that their synthesis can be both sustainable and cost efficient coupled with the fact that their physico-optical properties can be tailored during synthesis. CDs are highly dispersible in water, have high resistance to photo-bleaching, as well as low cytotoxicity and high biocompatibility.
It is in this regard that they have been touted as excellent candidates for applications in sensing, bioimaging and nanomedicine,31,32 among others. One of the first chiral CDs reported in the literature was synthesized by Ghosh et al. from the nucleotide guanosine 5′-monophosphate, where these G-dots were capable of intrinsically self-assembling to form biodegradable chiral hydrogels which could be used for biomedical applications and drug delivery.33 Zhang et al. also synthesized chiral CDs through hydrothermal synthesis by using L- and D-cysteine with citric acid. These CDs were explored as electrochemical probes for enantioselective recognition towards small target molecules such as enantiomeric tartaric acid, through a combination of electrochemical impedance spectroscopy (EIS) and linear sweep voltammetry.34 Deka et al. reported chiral CDs from an array of chiral amino acids and they studied the different chiral interactions with photosensitizers under UV radiation.35 Chiral CDs in biological systems have also been explored, as in the work of Hu et al. who synthesized CDs from enantiomers of cysteine.36 They investigated the activity of laccase enzyme under the influence of chiral CDs.36 Similarly, chiral cysteine-based CDs were used by Li et al. to understand its influence on cellular energy metabolism37 and by Zhang et al. to study its effects on mung bean plant growth.38 While these studies have provided a wealth of information on the properties of chiral CDs, many questions remain unanswered. In particular, (i) how chirality varies when starting with D- vs. L-enantiomers, or a mixture of both, (ii) whether these CDs are indeed chirally-distinct from the precursor molecules and (iii) how the chiral building blocks come to form CDs, and the nature of the intermediate molecules that polymerize and carbonize to produce the complete chiral nanoparticle.
Herein, we report a facile one-step microwave-assisted synthesis of chiral CDs from the chiral amino acid cysteine and achiral citric acid. We tuned the residual chirality observed in our CDs by controlling reaction parameters including temperature, time and chiral precursor concentration. We also unequivocally demonstrated that the observed chirality is clearly distinct from the chiral precursors and finally, in a proof of concept application, we demonstrated that these chiral carbon dots have antimicrobial activity, inhibiting the growth of various strains of Gram-negative and Gram-positive bacteria. This antimicrobial activity was also retained when the CDs were impregnated in an agar surface, suggesting that they may serve as potential antimicrobial additives in smart surfaces.
000 × g for 10 min. The supernatant was discarded, and the pellet was washed until no fluorescence was observed in the supernatant. The pellet was dried to produce a brown powder in a 70 °C oven and then resuspended in water for further analysis. The reaction conditions of the synthesis for all CDs are summarized in the ESI (Table S1†).
:
1 with the compound of interest in 96-well plates, then incubated at 30 °C for 20–24 hours (M. luteus, B. subtilis, B. thailandensis, K. aerogenes) or 37 °C (E. coli) for 16–20 hours (all other strains). The minimum inhibitory concentration (MIC) was defined as the concentration sufficient to inhibit bacterial growth as measured by the naked eye. For MIC testing in solid agar E. coli was adjusted to 1 × 106 CFU mL−1 in MHB, then streaked onto MHA laced with the noted concentration of L- or D-cysCDs. As with the broth microdilutions, plates were placed at 37 °C for 16–20 hours prior to MIC determination as per CLSI guidelines.40The optical properties of the L- and D-cysCDs, prepared at a temperature of 160 °C with a 10 min reaction time and a 1
:
1 concentration of citric acid to L-/D-cysteine precursor, were characterized using UV-Vis, fluorescence and circular dichroism spectroscopies (Fig. 1). The UV-Vis spectra (Fig. 1a) of the chiral CDs revealed two distinct absorption bands centred at ∼250 nm and ∼350 nm. The former absorbance band is characteristic of the π → π* transition of the aromatic sp2 domains, while the latter is attributed to the n → π* transitions of the C
O, as well as the C
N/C
S bonds of the aromatic CD core. As expected, both L- and D-cysCDs show similar absorbance profiles since they are comprised of enantiomers of the same precursors.
The cysCDs dispersed in water, at working concentrations of approximately 10 μg mL−1, exhibited an intense blue emission easily visualized by the naked eye under UV light (λex = 365 nm) (Fig. 1b inset). The enantiomers of the cysCDs show an emission maximum at 420 nm following 350 nm excitation wavelength by fluorescence spectroscopy with minimal difference in their profiles (Fig. 1b). The cysCDs exhibited an excitation independent emission with an increasing excitation wavelength. A control experiment of the unpassivated carbon dots, using only citric acid as the precursor, was also conducted. These unpassivated carbon dots had an absorption band centred at ∼350 nm (Fig. S1a†) and no significant fluorescence was observed highlighting the importance of functional groups in increasing radiative pathways (Fig. S1b†).
The observed optical properties are in accordance with other cysteine based chiral CDs, prepared using hydrothermal synthesis.33–38 The prominent peaks of the previously reported hydrothermal cysteine-based CDs were also centred around ∼250 nm and ∼350 nm. The similarities in optical properties of CDs from the two different synthesis methods can be attributed to the use of the same precursors with similar resulting functional groups and properties. The hydrothermal and microwave-prepared CDs also evidence excitation independent photoluminescence; however, the hydrothermal preparation approach resulted in CDs with an emission maximum at ∼520 nm. This could be due to the differences in size of the dots prepared using the two preparation methods.
Following absorbance and fluorescence characterization, circular dichroism spectroscopy was used to investigate whether the cysCDs prepared from the chiral L- or D-precursors had retained any chirality. L- and D-cysCDs show prominent absorbance bands at 250 nm and 350 nm equal in magnitude but opposite in sign. These bands are significantly different from the cysteine precursors, which show a single absorbance at approximately 210 nm (Fig. 1c). L-Cysteine gives rise to L-cysCDs and D-cysteine gives rise to D-cysCDs respectively and both sets of chiral L- and D-cysCDs, prepared under the same experimental conditions, display a highly symmetrical interaction with circularly polarized light and show a mirror image response. The peaks at 250 nm and 350 nm are equivalent to previous studies that have synthesized chiral cysCDs and they correspond to the UV-Vis absorbance bands of the dots.34–38 Furthermore, the unpassivated carbon dots composed of citric acid did not display any absorbance bands in the circular dichroism spectra (Fig. S1c†).
The physical characteristics of the cysCDs were thoroughly investigated to glean an understanding of their physico-chemical and optical properties. Transmission electron microscopy (TEM) analysis of the cysCDs shows an average nanoparticle size of 12 ± 3 nm (Fig. 2a). The cysCDs were quasi-spherical with a Gaussian size distribution ranging from 6–28 nm over a large population of the chiral CDs. The TEM images and the size distributions of cysCDs prepared at various reaction parameters are summarized in the ESI (Table S2 and Fig. S2–S5†). The amorphous nature of the CDs was examined using X-ray diffraction spectroscopy (XRD) and the cysCDs depicted the expected amorphous halo centred at ∼17° 2θ with the presence of several sharp crystalline peaks located at 21, 30, 31, 33 and 35° 2θ (Fig. S6†). The halo is typically associated with the (002) plane of graphene43,44 while the sharp features in the XRD suggests possible ordered semi-crystalline regions in the nanoparticle.
Additionally, the cysCDs were also analysed using thermogravimetric analysis (TGA) to further investigate their composition and study their thermal stability, which differ from the citric acid and the cysteine precursor (Fig. S7†). TGA indicates that there is 2% loss upon heating from 30–100 °C and a 5% loss from 100–150 °C. This was attributed to residual moisture and solvent adsorbed on the surface following synthesis and purification procedures. The large weight loss of 58% is noted between 200–500 °C and is ascribed to decomposition of the functional groups on the surface. Typically, oxygen, nitrogen and sulphur containing moieties undergo decomposition at such a temperature range.45–47 The weight loss occurring past 500 °C corresponds to oxidation of the amorphous carbon that forms the nanoparticle core.
As the properties of the nanoparticles were determined by their composition, the cysCDs were characterized by Fourier Transform Infrared (FT-IR) and X-ray photoelectron (XPS) spectroscopies. FT-IR analysis of the cysCDs showed differences pertaining to their surface groups relative to the precursors (Fig. S8†). The cysCDs have characteristic bands indicative of O–H stretching vibrations at 3500 cm−1, C
O stretching at 1700 cm−1 and C–O stretches at 1100 and 870 cm−1 that indicate carboxylic acid and other oxygen-containing functional groups, respectively, on the surface of the dots (Fig. 2b). The amino functional groups were also present in chiral CDs with bands at 3050–3250 cm−1 and 1510 cm−1 ascribed to the N–H and amide vibrations, respectively. The stretching vibrations of C–H, C
C and C–C are also noted in the FT-IR spectra at 2950, 1420 and 1330 cm−1, respectively. The typically weak S–H stretch is not observed in the FT-IR spectrum, however, the S
O stretch can be observed at ∼1100 cm−1.
The FT-IR findings are further corroborated by the XPS results. The XPS survey scan of the cysCDs shows prominent peaks at 533.08, 401.08, 289.08 and 166.08 eV corresponding to oxygen (O 1s), nitrogen (N 1s), carbon (C 1s) and sulfur (S 2p) binding energies, respectively. High resolution scans of the O 1s state (Fig. 2c) shows the presence of C–OH/C–O–C and C
O functional groups with deconvoluted binding energies observed at 533.66 and 532.16 eV, respectively. The pyridinic, pyrrolic and graphitic N groups in the CDs can be observed in high resolution of N 1s spectrum with binding energies at 401.62, 400.53 and 400.08 eV (Fig. 2d). Moreover, the C 1s spectrum (Fig. 2e) showed binding energies at 285.26, 287.22 and 289.06 eV that can be attributed to the –C/C
C, C–N/C–S, and C
O functional groups present in the CDs. Finally, the presence of S
O and S–H groups in the CDs can be observed in the S 2p spectrum at 164.66 and 163.58 eV, respectively (Fig. 2f). Our chiral cysteine CDs evidence similar surface functional groups as reported in the literature.33–38
Furthermore, XRD spectra of the cysCDs showed a disappearance of the sharp peaks with an increase in temperature indicating increasing disorder in the nanoparticle and a change in the structure of the cysCDs (Fig. S9†). The change was further supported by the differences in the TGA weight loss profile of the cysCDs as a function of increasing reaction temperatures (Fig. S10†). Thus, the variance in concentration of the surface thiols groups affirms the decrease in the residual chirality.
There were no significant differences in the optical and physical properties of the cysCDs reacted at the different temperatures. All cysCDs showed absorbance bands at ∼250 nm and ∼350 nm corresponding to π → π* and n → π* transitions and they exhibited fluorescence maxima at 420 nm (Fig. S11a†). Colloidal dispersions of cysCDs prepared at the same concentration revealed an increase in fluorescence intensity with increasing reaction temperatures (Fig. S11b†). We once again reason that at more elevated reaction temperatures there is a greater breakdown of precursors. This allowed for the formation of a well-hybridized network, enhancing the aromatic conjugated core and the associated fluorescence properties. FT-IR analysis of these cysCDs prepared at different reaction temperatures showed that the surface functional groups are relatively similar, which is expected as we noted that the precursors remained unchanged (Fig. S11c†).
Unpassivated carbon dots using citric acid were also synthesized at different reaction temperatures to gain a better understating of the chiro-optical properties of the cysCDs. These CDs absorbed at ∼350 nm (Fig. S1a†); however, there were no significant luminescent (Fig. S1b†) nor chiral properties (Fig. S1c†) observed in these systems.
O with increasing reaction time (Fig. S12†). A subsequent increase in the C
C/C–C was also observed with longer synthesis times further supporting the formation of a hybridized core (Fig. S12†). The changes to the structure were also supported by XRD analyses, showing increasing amorphous nature and decreasing crystalline peaks (Fig. S13†). Moreover, the changes in the TGA weight loss profiles further indicated the change in the surface composition of the CDs (Fig. S14†). No significant differences were noted in the optical properties of cysCDs in comparison to their counterparts prepared at different times (Fig. S15a†). There was a similar trend of increasing fluorescence with time as with reaction temperature as a more hybridized core was formed (Fig. S15b†) and no significant change was observed in the functional groups present as shown by the FTIR (Fig. S15c†).
:
1), more prominent absorbance bands at 250 nm and 350 nm were observed in the circular dichroism spectra. As more chiral precursors are available, an increased residual chirality was observed because there was an abundance of chiral precursors that can contribute to the formation of the dots. Conversely, a decrease in the cysteine to citric acid ratio (1
:
2) showed a decrease in the absorbance of circularly polarized light by the dots at the same wavelengths since fewer chiral precursor molecules were available. Once again, titration using Ellman's reagent highlights the concentration of free thiols on the surface of the dots with more free thiols present (0.010 mM) in the 2
:
1 cysteine
:
citric acid ratio in comparison to 1
:
2 cysteine
:
citric acid ratio (0.006 mM, Table S3†). The XRD profile of these CDs showed a decrease in crystallinity with an increasing concentration of citric acid (Fig. S16†). The cyclization of citric acid with amines and amino containing groups such as those found in cysteine leads to hybridized networks and a lack of surface functional groups. Furthermore, the change in the cysCD surface can be observed by the variation in the TGA profiles (Fig. S17†). There were no significant differences observed in the optical properties of the cysCDs as previously noted for the other reaction parameters (Fig. S18a†). The fluorescence of the cysCDs does however increase as a function of increasing cysteine precursor used (Fig. S18b†) and once again the FT-IR analysis indicates similar functional groups on the surface of these CDs (Fig. S18c†).
:
1 ratio) for antimicrobial activity through MIC determination on Gram-positive and Gram-negative bacteria using 96-well plates and agar broth dilutions. The Gram-positive strains tested were Bacillus subtilis DSM10, Burkholderia thailandensis E264, and Micrococcus luteus DSM20030. The Gram-negative strains tested were E. coli ATCC 25922 and MG1655, as well as Klebsiella aerogenes ATCC 13048. The concentration range of cysCDs used ranged from 15.6 μg mL−1 to 8 mg mL−1 with 2-fold increments from well to well, following standard broth microdilution guidelines.39 The concentration range of cysCDs used ranged from 62.5 μg mL−1 to 4 mg mL−1 for the agar broth dilutions protocol (Fig. 4).40
CD concentrations ranging from 0.25–4 mg mL−1 were required to inhibit bacterial growth, varying by both the strain tested and the chirality of the cysCDs (Table 1). The MIC of L-cysCDs on B. subtilis, M. luteus and B. thailandensis was determined to be 4 mg mL−1, 2 mg mL−1 and 1 mg mL−1, respectively (Table 1). On the other hand, the MIC of D-cysCDs was determined to be 0.5–1 mg mL−1 for all Gram-positive strains (Table 1). L-cysCDs inhibited the growth of the Gram-negative bacteria E. coli at 4 mg mL−1 in both liquid culture and when impregnated into agar plates, while D-cysCDs had an MIC of 2 mg mL−1 in both liquid and plate culture (Table 1, Fig. 4).40 For K. aerogenes, inhibition with L-cysCDs was achieved at 0.25 mg mL−1 and at 1 mg mL−1 with D-cysCDs (Table 1).
| Bacterial strain | MIC L-cysCDs (mg mL−1) | MIC D-cysCDs (mg mL−1) |
|---|---|---|
| M. luteus DSM20030 | 2 | 0.5 |
| B. subtilis DSM10 | 4 | 1 |
| B. thailandensis E264 | 1 | 1 |
| K. aerogenes ATCC 13048 | 0.25 | 1 |
| E. coli ATCC 25922 | 4 | 2 |
| E. coli MG1655 | 4 | 2 |
The difference in MICs between L- and D-cysCDs suggests that stereochemistry has a role in the inhibitory function of cysCDs. The chemical and physical composition of the chiral cysCDs are similar to each other as suggested by the FT-IR, TEM, UV-Vis and fluorescence spectroscopies with the major difference stemming from the chirality of the nanoparticles. The cysCDs behave differently in chiral environments as suggested by the interaction of the CDs with circularly polarized light. It is known that enantiomeric molecules often interact differently within biological systems due to their stereospecific nature. Furthermore, similar anti-microbial behaviour was also noted by the chiral cysCDs between liquid and solid media, as such they could be useful in the incorporation to smart surfaces, strip tests, potential biological sensors, etc.
Previous studies have attempted to explain the mechanism of action of nanoparticles for antimicrobial activity through the generation of reactive oxygen species (ROS) causing DNA damage and oxidation of proteins in bacterial cells.50 To determine if chiral cysCDs generated similar ROS we conducted a peroxide strip test assay. The test was negative, suggesting that the growth inhibition we see is not due to ROS production. Alternatively, the stereoselective effect of the nanoparticles discussed earlier can be explained by specific interactions with intracellular proteins, which could inhibit bacterial growth.
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: 10.1039/d0ra05208f |
| This journal is © The Royal Society of Chemistry 2020 |