Open Access Article
Dong Cai
a,
Zhi hua Zhangb,
Yu Chenc,
Chao Ruand,
Sheng qiang Lid,
Shi qin Chend and
Lian shan Chen*d
aCollege of Public Basic Sciences, Jinzhou Medical University, Jinzhou, 121001, China
bSchool of Chemical and Environmental Engineering, Liaoning University of Technology, Jinzhou, 121001, China
cSchool of Life Science and Biopharmaceutics, Shenyang Pharmaceutical University, Shenyang, 110016, China
dCollege of Pharmacy, Jinzhou Medical University, Jinzhou, 121001, China. E-mail: 509205162@QQ.com
First published on 23rd March 2020
A series of novel amide-linked 18β-glycyrrhetinic acid derivatives were developed by incorporating substituted piperazine amide fragments into the C30–COOH of 18β-glycyrrhetinic acid scaffold. The synthesized compounds were evaluated for their anticancer activity against Karpas299, A549, HepG2, MCF-7, and PC-3 cell lines by MTT assay. Besides, some compounds with electron-withdrawing groups on phenyl moieties exhibited noticeable antiproliferative activity. The most potent compound 4a was also found to be non-toxic to normal human hepatocytes LO2 cells. The compound 4a exhibited moderate inhibitory activity against wild-type ALK with an IC50 value of 203.56 nM and relatively weak potent activity to c-Met (IC50 > 1000 nM). Molecular docking studies were performed to explore the diversification in bonding patterns between the compound 4a and Crizotinib.
A general pharmacophore model of type II inhibitors covers three regions, namely, hinge-region binding, linker and tail moieties. In particular, a hydrogen bond donor–acceptor pair and a hydrophobic fragment in the tail moiety are capable of selectively taking up allosteric pocket, exhibiting an advantage over type I inhibitors.2,3
18β-Glycyrrhetinic acid (18β-GA, Fig. 1) is an inexpensive and available triterpene extracted from the roots of licorice plants (Glycyrrhiza glabra); its derivatives exhibit remarkable cytotoxic and pharmacological activities, in particular antitumor activity.4–6 The 18β-GA nucleus, a feasible structure for in-depth pharmaceutical exploration and for development of new potential antiproliferative drug candidates, has aroused extensive attention from medicinal chemists over the last decade.7–11 The presence of polar functional groups (C3–OH and C30–COOH) in its structure could impact the biological activities of the mentioned analogues.12
Inspired by the mentioned developments and facts, our previous work was continued in structural modification of 18β-GA.7 In the present study, substituted piperazine amide fragments were introduced into the C30–COOH of 18β-GA, and a novel series of amide-linked derivatives was designed as potential antitumor inhibitors. To assess the effect of different substituents on the piperazine amide fragment, the substitution of phenyl or benzyl group was modified, and the aromatic ring was altered (Fig. 2).
Piperidine carboxamide A (Fig. 3a), an anaplastic lymphoma kinase (ALK) inhibitor, exhibits excellent cytotoxic activity against ALK-positive Karpas-299 cells (IC50 = 0.384 μM). Moreover, such bioactive compound displayed significant activity in the ALK enzyme assay (IC50 = 0.174 μM), probably causing a reduction in the phosphorylation levels of ALK downstream effectors.13
![]() | ||
| Fig. 3 (a) Piperidine carboxamide A and compound 4a, (b) overlay of piperidine carboxamide A (stick; from cocrystal structure, PDB code: 4DCE) and the energy minimized structure for compound 4a (ball and stick). | ||
Chemical compounds with nearly identical three-dimensional (3D) structures are likely to exhibit similar activities. The similarity can be computed based upon steric, electronic, and/or other physical properties.14 Molecular overlay provided insights into possible improvements in potency and selectivity of the designed compounds. In the present study, the energy minimization conformation of the target compound 4a was aligned to the crystal conformation of piperidine carboxamide A using the molecular overlay option of Discovery Studio 3.5 suite. Fig. 3b suggests that the distance of methoxy groups on the benzyl fragments of two molecules reached 3.0 and 3.5 Å, respectively. Given the instability of linear molecular conformations, it is a relatively acceptable superposition between the mentioned two the lipophilic methoxyphenyl fragments. Moreover, the two nitrogen atom on piperazine ring are very close to the corresponding nitrogen atom on the 2-aminopyrimidine ring. Another overlapping feature was the presence of the alicyclic fragment of A and B rings of the target compound 4a, as well as the p-methyl benzyl group from piperidine carboxamide A. The 3D molecular similarity score was 0.3049. The maximum shape similarity of molecules is expressed by score 1 and the minimum similarity is denoted by score 0.15–17
According to the mentioned results, the novel amide-linked 18β-GA derivatives might exhibit potential antiproliferative activity.
:
1) to remove Boc group. Without being further purified, monoamide (3) was acylated with acid chlorides in the presence of triethylamine to produce the target compounds (4a–4v).
![]() | ||
| Scheme 1 Synthesis of compound 4. Reagents and conditions: (a) 1-Boc-piperazine, CH3CN, NEt3, EDCl, HOBt, reflux, 24 h; (b) TFA, CH2Cl2, 0/25 °C; (c) substituted acyl chloride, CH2Cl2, Et3N, r.t. | ||
A simple and efficient approach for amide bond formation is based on the reaction of substituted carboxylic acid and amine in the presence of coupling reagents.18–20 Monoamide (3) can also be generated by treating of compound (2) with piperazine in the presence of EDCl, HOBt, and triethylamine. However, the corresponding monoamide (3) could be obtained in relatively low isolated yields, the reaction was complicated by the competing diamidation to form symmetric bisamide (5). As shown in Scheme 2, the amount of the symmetric bisamide (5) generated was determined by the reaction conditions. For instance, no bisamide (5) was identified by treating the compound (2) with piperazine (1.0 equiv.) in the presence of EDCl, HOBt, and triethylamine in CH3CN at room temperature for 24 h. However, an intermediate (6) was largely isolated from the reaction mixture.7 The intermediate (6) did not react with piperazine at low reaction temperatures even after the extended reaction time (up to 48 h). Nevertheless, the above reaction was performed in refluxing CH3CN, and intermediate (6) could be fully converted into bisamide (5) and trace amount of the desired monoamide (3).
The steric hindrance around the C-30 ester group of intermediate (6) significantly impacted the nucleophilic substitution. The lowest-energy conformer of intermediate (6) and piperazine was achieved by MM2 calculations in ChemBio 3D Ultra 12.0. As shown in Fig. 4, the piperazine was difficult to get close to C-30 because of two bulky groups (1H-benzo[d][1,2,3]triazol-1-yl group and scaffold of 18β-GA).
Next, the effect of feeding sequence of above reaction was investigated. To a solution of piperazine (4.0 equiv.) in refluxing CH3CN, intermediate (6) solution (1.0 equiv.) was added dropwise and then stirred for 12 h. As shown in Scheme 2, under the reaction, bisamide (5) and the desired monoamide (3) were formed, and the isolated yields reached 53.7% and 40.8%, respectively.
Condensation of nearly equimolecular amounts of monoamide (3) with substituted acyl chloride in CH2Cl2 with triethylamine at room temperature affords target compounds (4a–4v) with 84.8–94.6% yields. The C3–OH of 18β-GA did not interfere with these amidation reactions. However, the amidation of monoamide (3) with 2-(4-chlorophenyl)acetyl chloride was carried out in the solution of triethylamine and CH2Cl2 at 40 °C, and competitive esterification to form the corresponding compound (7) in 38.4% isolated yield contributed to a lower yield of the target compound (4w). Moreover, if the acid chloride is excessively large and the reaction time is too long at room temperature, it will also lead to competitive esterification (Scheme 3).
![]() | ||
| Scheme 3 Synthesis of compound 4w, and 7. Reagents and conditions: (a) p-chlorophenylacetyl chloride, CH2Cl2, Et3N, r.t.; (b) p-chlorophenylacetyl chloride, CH2Cl2, Et3N, 40 °C. | ||
| Compound | HepG2 | Karpas299 | ||
|---|---|---|---|---|
| 2 μg mL−1 | 20 μg mL−1 | 2 μg mL−1 | 20 μg mL−1 | |
| 4a | 0.00 | 93.11 | 0.00 | 96.62 |
| 4b | 0.87 | 50.81 | 0.49 | 58.13 |
| 4c | 0.00 | 63.23 | 0.00 | 84.32 |
| 4d | 0.00 | 68.04 | 0.00 | 91.46 |
| 4e | 0.00 | 11.96 | 0.00 | 18.28 |
| 4f | 0.06 | 29.40 | 0.00 | 12.24 |
| 4g | 0.00 | 14.20 | 0.00 | 8.00 |
| 4h | 0.00 | 24.00 | 0.00 | 17.60 |
| 4i | 0.00 | 19.10 | 0.00 | 12.76 |
| 4j | 0.10 | 34.51 | 0.00 | 6.62 |
| 4k | 0.00 | 25.53 | 0.00 | 4.00 |
| 4l | 4.26 | 51.12 | 0.00 | 69.32 |
| 4m | 0.00 | 40.24 | 0.0 | 53.31 |
| 4n | 0.00 | 32.73 | 0.00 | 26.27 |
| 4o | 0.00 | 30.39 | 0.00 | 20.69 |
| 4p | 0.00 | 12.37 | 0.00 | 0.00 |
| 4q | 0.00 | 27.75 | 0.00 | 45.02 |
| 4r | 0.00 | 63.33 | 6.66 | 82.66 |
| 4s | 0.00 | 47.97 | 0.00 | 42.41 |
| 4t | 1.84 | 31.68 | 0.00 | 23.78 |
| 4u | 3.03 | 78.52 | 0.00 | 91.71 |
| 4v | 2.75 | 45.53 | 0.00 | 27.99 |
| 4w | 1.35 | 19.32 | 0.00 | 11.46 |
| 4x | 0.17 | 15.48 | 0.00 | 17.25 |
| 4y | 1.48 | 6.36 | 0.00 | 0.00 |
| 7 | 0.00 | 0.00 | 0.00 | 0.00 |
| 18β-GA | 0.00 | 10.74 | 0.00 | 15.28 |
| Crizotinib | 27.15 | 97.76 | 75.71 | 96.89 |
Preliminary SAR analyses suggested that the substituent properties and positions of the phenyl ring fragment were critical to modulate their antiproliferative activity. Table 1 presents that electron-withdrawing substituents on the phenyl ring displayed relatively poor antiproliferative activities against HepG2 and Karpas299 cells. Only the 3-fluorophenyl substituted derivative (4l) showed over 50% growth inhibitory activity at 20 μg mL−1 against two test cells as compared with the target compounds (4e, 4f, 4g, 4h, 4i, 4j, 4k, 4m, 4n, 4o, 4p, 4q). The introduction of 6-chloronicotinoyl group at the identical position (4t) also significantly reduced activities against all of the tested cancer cell lines.
In contrast to the compounds with electron-withdrawing groups on the aromatic ring fragment, it was more favorable when the electron-donating group was added to the phenyl ring fragment (e.g. CH3O, CH3). Compound (4a) exhibited nearly the identical cell growth inhibitory activity to Crizotinib against HepG2 and Karpas299 cells at the identical concentration of 20 μg mL−1. 3-Methylphenyl substituted derivative (4d) also displayed good activity, especially for Karpas299 cell. Note that 3,5-dimethoxyphenyl substituted derivative (4b) and 3,5-dimethylphenyl substituted derivative (4c) have drastically reduced inhibitory activity against HepG2 and Karpas299 cells, revealing that the substitution of the 3,5 position on the phenyl ring is not recommended.
When R is a substituted benzyl group, the compound (4v) containing 4-fluorobenzyl fragment exhibited better antiproliferative activity than that of compound (4w) containing 4-chlorobenzyl fragment. However, on the whole, the antitumor inhibition rate of these two compounds was below 50% at 20 μg ⋅mL−1. Nevertheless, compound (4u) with thiophen-2-methylene fragment displayed an outstanding potency against HepG2 and Karpas299 cells.
It is noteworthy that the target compounds (4r, 4s) with naphthenic substituted amides as the side chain showed an evident inhibitory effect against HepG2 and Karpas299 cells. In particular, R is cyclohexyl group, compounds (4r) exhibited notable cell growth inhibitory activity against Karpas299 cell (82.66% at a concentration of 20 μg mL−1). Analogous compounds (4x, 4y) containing morpholine or methoxymethylene group, determined a significant decrease of efficacy. It is therefore indicated that the ether fragment could establish an unfavorable interaction with the receptor.
According to the structural features and corresponding antitumor activities of the compounds reported in the literature,10,21 the antitumor activity of the selected compounds 4a, 4c, 4d, 4r, and 4u was evaluated at the cellular level expressed by IC50 values against five cancer cell lines (Karpas299, A549, HepG2, MCF-7 and PC-3). Karpas299 is a typical anaplastic lymphoma kinase mutant-driven cancer cell line. Table 2 reveals that the most effective compound 4a exhibited superior antiproliferative effect only against Karpas299 and HepG2 cells with IC50 values of 6.51 μM, and 6.93 μM, respectively.
| Compound | Karpas299 | A549 | HepG2 | MCF-7 | PC-3 |
|---|---|---|---|---|---|
| 4a | 6.51 | >40 | 6.93 | 18.85 | 18.18 |
| 4c | 15.59 | >40 | 11.95 | >40 | 27.56 |
| 4d | 9.41 | >40 | 12.92 | >40 | 20.37 |
| 4r | 20.00 | 38.54 | 22.67 | 35.43 | 32.81 |
| 4u | 18.30 | >40 | 11.81 | >40 | 37.84 |
| 18β-GA | >40 | >40 | >40 | >40 | >40 |
| Crizotinib | 2.82 | 1.49 | 10.59 | 4.09 | 7.33 |
To determine whether the cell growth inhibitory effect of compound 4a is associated with a time- and concentration-dependent manner, the cells were treated by MTT cytotoxicity assay, and five concentration gradients of compound 4a were selected. After 24 h incubation, the HepG2 cells were treated for 24, 48 and 72 h by compound 4a at the concentrations of 0.064, 0.32, 1.6, 8.0 and 40 μg∙ mL−1. The result was shown in Fig. 5, compound 4a was observed in a significant time and concentration dependent manner to inhibit the proliferation of HepG2 cell.
![]() | ||
| Fig. 5 The relationship between different concentrations and time of compound 4a and proliferation inhibitory effect. Data are means ± SD of the inhibition (%) from three independent experiments. | ||
According to the results, the compound 4a with the most potent antiproliferative activity was used for further processing. HepG2 cells and normal human hepatocytes LO2 cells were cultivated with compound 4a at increasing concentrations. A 48 h continuous drug exposure protocol was employed by the MTT assay. As shown in Fig. 6, compound 4a significantly inhibited the proliferation activity of HepG2 cells in a dose-dependent manner. In contrast, compound 4a exhibited slight toxicity towards LO2 cells. As revealed from the results, the compound 4a might exhibit selective antiproliferative activity against human tumor cells.
![]() | ||
| Fig. 6 Cytotoxicity of compound 4a toward HepG2 and LO2 cells. Data are means ± SD of the inhibition (%) from three independent experiments. | ||
| Entry | ALK/IC50 (nM) | c-met/IC50 (nM) |
|---|---|---|
| 4a | 203.56 | >1000 |
| 4d | 686.19 | >1000 |
| Crizotinib | 11.21 | 7.68 |
Like Crizotinib (Fig. 7), the compound 4a possessed a piperazine amide tail fragment can be easily docked into the ATP site of the DFG-out ALK co-crystal structure (PDB code: 2XP2). The docking conformation revealed that the 23,24-dimethylcyclohexan-3-ol fragment of compound 4a was fully buried into the ATP binding site via hydrophobic interactions, compared with the pyridin-2-ylamine fragment of Crizotinib. Nevertheless, for its large size of the linker and the tail fragment, the compound 4a failed to form the expected hydrogen bonding interactions with the kinase hinge region. Moreover, the 3,4-dimethoxybenzoyl fragment formed a CH–π interaction with the ARG1120. The C3–OH of compound 4a pointed to the activation loop (DFG-out conformation). The compound 4a with moderate enzymatic activity was relatively weakly bound to the potential binding sites, probably due to the large steric hindrance tail groups.
A white solid; yield, 94.3%; mp 224.3–225.7 °C; 1H NMR (400 MHz, chloroform-d) δ 5.66 (s, 1H, CH-12), 3.63–3.52 (m, 4H, piperazinyl CH2 × 2), 3.39 (t, J = 5.2 Hz, 4H, piperazinyl CH2 × 2), 3.22–3.18 (m, 1H, OH-3), 2.79–2.74 (m, 1H, CH-1), 2.31 (s, 1H, CH-9), 2.30–2.23 (m, 1H, CH-16), 1.45 (s, 9H, tert-butyl CH3 × 3), 1.34 (s, 3H, CH3-27), 1.20 (s, 3H, CH3-25), 1.11 (s, 3H, CH3-26), 1.10 (s, 3H, CH3-29), 0.98 (s, 3H, CH3-23), 0.79 (s, 3H, CH3-24), 0.78 (s, 3H, CH3-28), 0.68 (d, J = 11.6 Hz, 1H, CH-5); 13C NMR (101 MHz, chloroform-d) δ 200.10 (C11), 174.13 (C30), 169.40 (C13), 154.53 (Boc C
O), 128.56 (C12), 80.25 (C3), 78.75 (tert-butyl C), 61.77 (C9), 54.92 (C5), 48.08 (C18), 45.26 (C14), 43.88 (C20), 43.82 (piperazinyl C × 2), 43.26 (C8/C19), 39.12 (C1/C4), 39.10 (piperazinyl C × 2), 37.70 (C22), 37.06 (C10), 33.16 (C7), 32.79 (C17), 31.75 (C21), 28.40 (C29), 28.36 (tert-butyl CH3 × 3), 28.07 (C28), 27.28 (C23), 27.05 (C2), 26.69 (C15), 26.39 (C16), 23.14 (C27), 18.66 (C26), 17.46 (C6), 16.36 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C39H63N2O5: 639.47370, found: 639.47360.
A white solid; yield, 97.0%; mp 258.5–259.7 °C (literature (ref. 23): 160 °C, decomp.); 1H NMR (400 MHz, chloroform-d) δ 5.67 (s, 1H, CH-12), 3.63 (q, J = 3.7 Hz, 4H, piperazinyl CH2 × 2), 3.20 (dd, J = 10.9, 5.4 Hz, 1H, OH-3), 2.88 (t, J = 5.0 Hz, 4H, piperazinyl CH2 × 2), 2.76 (dt, J = 13.6, 3.6 Hz, 1H, CH-1), 2.31 (s, 1H, CH-9), 2.26 (dd, J = 14.0, 3.9 Hz, 1H, CH-16), 1.36 (s, 3H, CH3-27), 1.19 (s, 3H, CH3-25), 1.11 (s, 3H, CH3-26), 1.10 (s, 3H, CH3-29), 0.98 (s, 3H, CH3-23), 0.79 (s, 3H, CH3-24), 0.78 (s, 3H, CH3-28), 0.67 (d, J = 11.4 Hz, 1H); 13C NMR (101 MHz, chloroform-d) δ 200.19 (C11), 173.89 (C30), 169.64 (C13), 128.51 (C12), 78.73 (C3), 61.77 (C9), 54.92 (C5), 48.16 (C18), 45.94 (piperazinyl C × 2), 45.26 (C14), 43.79 (C20), 43.27 (C8), 39.14 (piperazinyl C × 2), 39.11 (C19), 37.72 (C1/4), 37.07 (C22), 33.28 (C10), 32.78 (C7), 31.76 (C17), 28.41 (C21), 28.07 (C29), 27.28 (C28), 27.00 (C23), 26.70 (C2), 26.42 (C15), 23.13 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.57 (C24); HRMS (m/z): [M + H]+ calcd for C34H55N2O3: 539.42127, found: 539.42120.
:
1 CH2Cl2–methanol).
O), 150.52 (phenyl), 149.04 (phenyl), 128.55 (C12), 127.28 (phenyl), 120.19 (phenyl) 110.85 (phenyl), 110.46 (phenyl), 78.72 (C3), 61.78 (C9), 56.01 (–OCH3), 55.99 (–OCH3), 54.91 (C5), 48.19 (C18), 45.27 (C14), 43.90 (C20), 43.72 (C8), 43.27 (piperazinyl C), 39.10 (piperazinyl C), 37.68 (C4), 37.05 (C22), 33.26 (C10), 32.78 (C7), 31.79 (C17), 29.69 (C21), 28.38 (C29), 28.07 (C28), 27.27 (C23), 27.06 (C2), 26.68 (C15), 26.40 (C16), 23.15 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.57 (C24); HRMS (m/z): [M + Na]+ calcd for C43H62N2NaO6: 725.45056, found: 725.45778.
O), 160.91 (phenyl), 137.02 (phenyl), 128.56 (C12), 104.77 (phenyl), 101.90 (phenyl), 78.73 (C3), 61.77 (C9), 55.51 (–OCH3), 54.91 (C5), 48.13 (C18), 45.26 (C14), 43.89 (C20), 43.75 (C8), 43.26 (piperazinyl C), 39.10 (piperazinyl C), 37.67 (C22), 37.05 (C10), 33.18 (C7), 32.78 (C17), 31.78 (C21), 28.38 (C29), 28.07 (C28), 27.28 (C23), 27.04 (C2), 26.67 (C15), 26.39 (C16), 23.14 (C27), 18.65 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C43H63N2O6: 703.46861, found: 703.47552.
O), 138.34 (phenyl), 135.13 (phenyl), 131.52 (phenyl), 128.59 (C12), 124.59 (phenyl), 78.75 (C3), 61.78 (C9), 54.92 (C5), 48.10 (C18), 45.27 (C14), 43.90 (C20), 43.78 (C8), 43.26 (piperazinyl C), 39.11 (piperazinyl C), 37.69 (C22), 37.06 (C10), 33.15 (C7), 32.79 (C17), 31.77 (C21), 28.39 (C29), 28.07 (C28), 27.29 (C23), 27.06 (C2), 26.69 (C15), 26.39 (C16), 23.14 (C27), 21.26 (phenyl-CH3), 18.66 (C26), 17.47 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + Na]+ calcd for C43H63N2O4: 671.47878, found: 671.48498.
O), 138.59 (phenyl), 135.11 (phenyl), 130.72 (phenyl), 128.59 (C12), 128.41 (phenyl), 127.70 (phenyl), 123.95 (phenyl), 78.75 (C3), 61.78 (C9), 54.92 (C5), 48.10 (C18), 45.26 (C14), 43.91 (C20), 43.78 (C8), 43.26 (piperazinyl C), 39.11 (piperazinyl C), 37.69 (C1/4), 37.06 (C22), 33.15 (C10), 32.79 (C7), 31.77 (C17), 29.69 (C21), 28.39 (C29), 28.07 (C28), 27.29 (C23), 27.05 (C2), 26.69 (C15), 26.39 (C16), 23.14 (C27), 21.37 (phenyl CH3), 18.66 (C26), 17.47 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C42H61N2O4: 657.46313, found: 657.46856.
O), 134.82 (phenyl), 134.52 (phenyl), 133.19 (phenyl), 130.75 (phenyl), 129.36 (phenyl), 128.58 (C12), 126.42 (phenyl), 78.74 (C3), 61.79 (C9), 54.92 (C5), 48.14 (C18), 45.27 (C14), 43.92 (C20), 43.74 (C8), 43.27 (piperazinyl C), 39.11 (piperazinyl C), 37.67 (C4), 37.06 (C22), 33.19 (C10), 32.79 (C7), 31.79 (C17), 29.69 (C21), 28.39 (C29), 28.07 (C28), 27.39 (C23), 27.05 (C2), 26.67 (C15), 26.39 (C16), 23.15 (C27), 18.66 (C26), 17.45 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + Na]+ calcd for C41H56Cl2N2NaO4: 733.35148, found: 733.35752.
O), 135.90 (phenyl), 133.64 (phenyl), 131.20 (phenyl), 129.68 (phenyl), 128.87 (phenyl), 128.80 (phenyl), 128.59 (C12), 127.85 (phenyl), 78.75 (C3), 61.78 (C9), 54.92 (C5), 48.10 (C18), 46.76 (C14), 45.27 (C20), 43.91 (C8), 43.26 (piperazinyl C), 41.88 (C19), 39.10 (piperazinyl C), 37.68 (C4), 37.05 (C22), 33.26 (C10), 32.78 (C7), 31.79 (C17), 29.69 (C21), 28.38 (C29), 28.07 (C28), 27.27 (C23), 27.06 (C2), 26.68 (C15), 26.40, 41.88 (piperazinyl C), 39.11 (C4), 37.67 (C22), 37.06 (C10), 32.79 (C7), 31.77 (C17), 29.69 (C21), 28.38 (C29), 28.07 (C28), 27.28 (C23), 27.06 (C2), 26.67 (C15), 26.38 (C16), 23.15 (C27), 18.65 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C41H57Cl2N2O4: 711.36954, found: 711.37585.
O), 167.78 (C–Cl), 164.23 (C–Cl), 164.11 (C–Cl), 161.73 (C–Cl), 161.61 (C–Cl), 138.13 (phenyl), 128.53 (C12), 110.54 (phenyl), 110.46 (phenyl), 110.35 (phenyl), 110.27 (phenyl), 105.83 (phenyl), 105.58 (phenyl), 105.33 (phenyl), 80.55 (C3), 61.69 (C9), 54.99 (C5), 48.15 (C18), 45.28 (C14), 43.92 (C20), 43.70 (C8), 43.26 (piperazinyl C), 38.77 (piperazinyl C), 38.01 (C4), 37.66 (C22), 36.90 (10), 33.19 (C7), 32.72 (C17), 31.78 (C21), 29.69 (C29), 28.39 (C28), 28.02 (C23), 27.04 (C2), 26.66 (C15), 26.36 (C16), 21.32 (C27), 18.65 (C26), 17.34 (C6), 16.66 (C25), 16.41 (C24); HRMS (m/z): [M + Na]+ calcd for C41H56Cl2N2NaO4: 733.35148, found: 733.35754.
O), 136.81 (phenyl), 134.76 (phenyl), 130.19 (phenyl), 130.02 (phenyl), 128.59 (C12), 127.31 (phenyl), 125.15 (phenyl), 78.75 (C3), 61.78 (C9), 54.92 (C5), 48.11 (C18), 45.27 (C14), 43.92 (C20), 43.77 (C8), 43.26 (piperazinyl C), 39.12 (piperazinyl C), 39.10 (C1), 37.68 (C4), 37.06 (C22), 33.15 (C10), 32.79 (C7), 31.78 (C17), 29.69 (C21), 28.39 (C29), 28.07 (C28), 27.28 (C23), 27.04 (C2), 26.68 (C15), 26.38 (C16), 23.14 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C41H58ClN2O4: 677.40851, found: 677.41461.
O), 136.82 (phenyl), 134.75 (phenyl), 130.18 (phenyl), 130.02 (phenyl), 128.58 (C12), 127.30 (phenyl), 125.14 (phenyl), 78.72 (C3), 61.78 (C9), 54.91 (C5), 48.10 (C18), 45.26 (C14), 43.91 (C20), 43.77 (C8), 43.26 (piperazinyl C), 39.11 (piperazinyl C), 37.67 (C4), 37.06 (C22), 33.14 (C10), 32.78 (C7), 31.77 (C17), 29.69 (C21), 28.39 (C29), 28.07 (C28), 27.28 (C23), 27.04 (C2), 26.67 (C15), 26.38 (C16), 23.14 (C27), 18.66 (C26), 17.46 (C6), 16.36 (C25), 15.57 (C24); HRMS (m/z): [M + H]+ calcd C41H58ClN2O4: 677.40851, found: 677.41284.
O), 137.05 (phenyl), 133.12 (phenyl), 130.25 (phenyl), 130.16 (phenyl), 128.59 (C12), 125.60 (phenyl), 122.79 (phenyl), 78.75 (C3), 61.79 (C9), 54.92 (C5), 48.11 (C18), 45.27 (C14), 43.92 (C20), 43.77 (C8), 43.26 (piperazinyl C), 39.11 (piperazinyl C), 37.68 (C4), 37.06 (C22), 33.15 (C10), 32.79 (C7), 31.78 (C17), 29.69 (C21), 28.39 (C29), 28.07 (C28), 27.28 (C23), 27.06 (C2), 26.68 (C15), 26.39 (C16), 23.15 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + Na]+ calcd for C41H57BrN2NaO4: 743.33994, found: 743.34621, 745.34582.
O), 133.89 (phenyl), 131.88 (phenyl), 128.84 (phenyl), 128.58 (C12), 124.45 (phenyl), 78.75 (C3), 61.79 (C9), 54.92 (C5), 48.15 (C18), 45.27 (C14), 43.91 (C20), 43.74 (C8), 43.27 (piperazinyl C), 39.11 (piperazinyl C), 37.67 (C4), 37.06 (C22), 33.21 (C10), 32.79 (C7), 31.78 (C17), 29.70 (C21), 28.38 (C29), 28.07 (C28), 27.28 (C23), 27.05 (C2), 26.68 (C15), 26.39 (C16), 23.15 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C41H58BrN2O4: 721.35800, found: 721.36354, 723.36266.
O), 163.78 (C–F), 161.30 (C–F), 137.17 (phenyl), 137.10 (phenyl), 130.52 (phenyl), 130.44 (phenyl), 128.59 (C12), 122.74 (phenyl), 122.71 (phenyl), 117.22 (phenyl), 117.01 (phenyl), 114.56 (phenyl), 114.33 (phenyl), 78.74 (C3), 61.78 (C9), 54.92 (C5), 48.11 (C18), 45.27 (C14), 43.92 (C20), 43.77 (C8), 43.26 (piperazinyl C), 39.11 (piperazinyl C), 37.68 (C4), 37.06 (C22), 33.15 (C10), 32.79 (C7), 31.77 (C17), 29.69 (C21), 28.39 (C29), 28.07 (C28), 27.28 (C23), 27.04 (C2), 26.68 (C15), 26.38 (C16), 23.14 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd C41H58FN2O4: 661.43806, found: 661.44479.
O), 162.62 (C–F), 162.50 (C–F), 159.77 (C–F), 159.65 (C–F), 157.28 (C–F), 157.16 (C–F), 130.89 (phenyl), 130.84 (phenyl), 130.79 (phenyl), 130.74 (phenyl), 128.60 (C12), 119.80 (phenyl), 119.76 (phenyl), 119.62 (phenyl), 119.58 (phenyl), 112.58 (phenyl), 112.54 (phenyl), 112.36 (phenyl), 112.33 (phenyl), 104.51 (phenyl), 104.26 (phenyl), 104.00 (phenyl), 78.73 (C3), 61.78 (C9), 54.92 (C5), 48.06 (C18), 47.12 (C14), 45.26 (C20), 43.92 (C8), 43.82, 43.26 (C8), 42.31 (piperazinyl C), 39.10 (C4), 37.68 (C22), 37.06 (C10), 33.09 (C7), 32.78 (C17), 31.76 (C21), 28.07 (C28), 27.27 (C23), 27.05 (C2), 26.67 (C15), 26.37 (C16), 23.14 (C27), 18.65 (C26), 17.46 (C6), 16.36 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C41H57F2N2O4: 679.42864, found: 679.43500.
O), 167.77 (C–F), 167.74 (C–F), 164.23 (C–F), 164.11 (C–F), 161.72 (C–F), 161.60 (C–F), 138.21 (phenyl), 138.13 (phenyl), 138.04 (phenyl), 128.58 (C12), 110.53 (phenyl), 110.45 (phenyl), 110.34 (phenyl), 110.26 (phenyl), 105.82 (phenyl), 105.57 (phenyl), 105.32 (phenyl), 78.72 (C3), 61.78 (C9), 54.91 (C5), 48.10 (C18), 45.26 (C14), 45.21 (20), 43.92 (C8), 43.76 (piperazinyl C), 43.26 (C19), 39.10 (piperazinyl C), 37.66 (C22), 37.06 (C10), 33.12 (C7), 32.78 (C17), 31.77 (C21), 28.38 (C29), 28.07 (C28), 27.27 (C23), 27.02 (C2), 26.67 (C15), 26.37 (C16), 23.14 (C27), 18.66 (C26), 17.46 (C6), 16.36 (C25), 15.57 (C24); HRMS (m/z): [M + H]+ calcd for C41H57F2N2O4: 679.42864, found: 679.43500.
O), 138.91 (phenyl), 131.09 (phenyl), 130.38 (phenyl), 129.27 (CF3), 128.59 (C12), 126.84 (phenyl), 124.21 (phenyl), 124.17 (phenyl), 78.74 (C3), 61.79 (C9), 54.92 (C5), 48.12 (C18), 45.27 (C14), 43.93 (C20), 43.76 (C8), 43.26 (piperazinyl C), 39.11 (piperazinyl C), 37.67 (C4), 37.06 (C22), 33.15 (C10), 32.79 (C7), 31.78 (C17), 29.70 (C21), 28.39 (C29), 28.07 (C28), 27.28 (C23), 27.04 (C2), 26.67 (C15), 26.38 (C16), 23.14 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C42H58F3N2O4: 711.43487, found: 711.44181.
O), 138.65 (phenyl), 132.15 (phenyl), 131.82 (phenyl), 130.39 (phenyl), 128.57 (C12), 127.48 (phenyl), 125.82 (CF3), 125.78 (CF3), 125.74 (CF3), 125.70 (CF3), 124.94 (phenyl), 122.23 (phenyl), 78.74 (C3), 61.79 (C9), 54.92 (C5), 48.18 (C18), 45.28 (C14), 43.92 (C20), 43.70 (C8), 43.27 (piperazinyl C), 39.10 (piperazinyl C), 37.66 (C4), 37.06 (C22), 33.24 (C10), 32.78 (C7), 31.79 (C17), 29.69 (C21), 28.38 (C29), 28.07 (C28), 27.27 (C23), 27.04 (C2), 26.67 (C15), 26.39 (C16), 23.14 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + Na]+ calcd for C42H57F3N2NaO4: 733.41681, found: 733.42400.
O), 139.42 (phenyl), 132.56 (phenyl), 128.55 (C12), 127.82 (phenyl), 117.92 (phenyl), 113.89 (CN), 78.72 (C3), 61.80 (C9), 54.92 (C5), 48.21 (C18), 45.28 (C14), 43.93 (C20), 43.66 (C8), 43.27 (piperazinyl C), 39.11 (piperazinyl C), 37.64 (C4), 37.07 (C22), 33.29 (C10), 32.78 (C7), 31.79 (C17), 29.69 (C21), 28.38 (C29), 28.07 (C28), 27.27 (C23), 27.03 (C2), 26.67 (C15), 26.39 (C16), 23.14 (C27), 18.66 (C26), 17.45 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C42H58N3O4: 668.44273, found: 668.44912.
O), 174.20 (C30), 169.29 (C13), 128.58 (C12), 78.74 (C3), 61.77 (C9), 54.92 (C5), 48.07 (C18), 45.33 (C14), 45.26 (C20), 43.91 (C8), 43.82 (piperazinyl C), 43.26 (cyclohexane), 41.60 (C19), 40.39 (piperazinyl C), 39.11 (C4), 37.70 (C22), 37.06 (C10), 33.08 (C7), 32.79 (C17), 31.76 (C21), 29.69 (cyclohexane), 29.36 (cyclohexane), 29.29 (C29), 28.39 (C28), 28.07 (C23), 27.28 (C2), 27.03 (C15), 26.69 (C16), 26.38 (cyclohexane), 25.79 (cyclohexane), 25.76 (cyclohexane), 23.15 (C27), 18.66 (C26), 17.46 (C6), 16.36 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C41H65N2O4: 649.49443, found: 649.50050.
O), 169.31 (C13), 128.59 (C12), 78.73 (C3), 61.78 (C9), 54.92 (C5), 48.07 (C18), 45.26 (C14), 43.93 (C20), 43.84 (C8), 43.26 (piperazinyl C), 42.09 (C19), 39.10 (piperazinyl C), 37.71 (C22), 37.06 (C10), 33.07 (C7), 32.79 (C17), 31.77 (C21), 29.69 (C29), 28.40 (C28), 28.07 (C23), 27.28 (C2), 27.04 (C15), 26.69 (C16), 23.15 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.57 (C24), 10.97 (cyclopropane), 7.72 (cyclopropane), 7.70 (cyclopropane); HRMS (m/z): [M + Na]+ calcd for C38H58N2NaO4: 629.42943, found: 629.43642.
O), 153.02 (pyridyl), 148.12 (pyridyl), 138.01 (pyridyl), 129.72 (pyridyl), 128.57 (C12), 124.51 (pyridyl), 78.74 (C3), 61.79 (C9), 54.92 (C5), 48.16 (C18), 45.27 (C14), 43.93 (C20), 43.72 (C8), 43.27 (piperazinyl C), 39.13 (piperazinyl C), 39.11 (C4), 37.65 (C22), 37.06 (C10), 33.20 (C7), 32.78 (C17), 31.79 (C21), 28.38 (C29), 28.07 (C28), 27.28 (C23), 27.04 (C2), 26.67 (C15), 26.39 (C16), 23.15 (C27), 18.66 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C40H57ClN3O4: 678.40376, found: 678.41033.
O], 135.98 (thiophen-2-yl), 128.58 (C12), 126.98 (thiophen-2-yl), 126.13 (thiophen-2-yl), 124.94 (thiophen-2-yl), 78.74 (C3), 61.77 (C9), 54.91 (C5), 48.02 (C18), 46.16 (C14), 45.26 (C20), 43.90 (C8), 43.82 (piperazinyl C), 43.25 (C19), 41.98 (piperazinyl C), 39.11 (C4), 37.68 (C22), 37.05 (C10), 35.17 [(thiophen-2-yl)acetyl-CH2], 33.00 (C7), 32.79 (C17), 31.75 (C21), 29.69 (C29), 28.38 (C28), 28.07 (C23), 27.28 (C2), 27.03 (C15), 26.67 (C16), 23.14 (C27), 18.65 (C26), 17.46 (C6), 16.37 (C25), 15.57 (C24); HRMS (m/z): [M + Na]+ calcd for C40H58N2NaO4S: 685.40150, found: 685.40759.
O], 163.04 (C–F), 160.60 (C–F), 130.26 (phenyl), 130.22 (phenyl), 130.14 (phenyl), 128.56 (C12), 115.81 (phenyl), 115.60 (phenyl), 78.73 (C3), 61.77 (C9), 54.91 (C5), 48.05 (C18), 45.94 (C14), 45.26 [(4-fluorophenyl)acetyl, CH2], 43.89 (C20), 43.79 (C8), 43.25 (piperazinyl C), 41.86 (C19), 39.90 (piperazinyl C), 39.10 (C1), 37.67 (C4), 37.05 (C22), 33.03 (C10), 32.78 (C7), 31.75 (C17), 29.69 (C21), 28.37 (C29), 28.07 (C28), 27.27 (C23), 27.02 (C2), 26.67 (C15), 26.37 (C16), 23.14 (C27), 18.65 (C26), 17.46 (C6), 16.37 (C25), 15.57 (C24); HRMS (m/z): [M + H]+ calcd for C42H60FN2O4: 675.45371, found: 675.46080.
O], 133.01 (phenyl), 132.92 (phenyl), 130.01 (phenyl), 128.96 (phenyl), 128.57 (C12), 78.74 (C3), 61.78 (C9), 54.92 (C5), 48.05 (C18), 45.93 (C14), 45.26 [(4-chlorophenyl)acetyl, CH2], 43.89 (C20), 43.79 (C8), 43.25 (piperazinyl C), 41.86 (C19), 40.07 (piperazinyl C), 39.10 (C1), 37.67 (C4), 37.06 (C22), 33.03 (C1), 32.79 (C7), 31.75 (C17), 29.69 (C21), 28.37 (C29), 28.07 (C28), 27.28 (C23), 27.02 (C2), 26.67 (C15), 26.37 (C16), 23.14 (C27), 18.65 (C26), 17.46 (C6), 16.37 (C25), 15.56 (C24); HRMS (m/z): [M + H]+ calcd for C42H60ClN2O4: 691.42416, found: 691.43121.
O), 128.54 (C12), 78.72 (C3), 61.78 (C9), 54.91 (C5), 48.13 (C18), 47.14 (morpholinyl-C), 46.91 (morpholinyl-C), 45.26 (C14), 43.88 (C20), 43.77 (C8), 43.26 (piperazinyl C), 39.11 (piperazinyl C), 37.69 (C4), 37.06 (C22), 33.20 (C10), 32.78 (C7), 31.76 (C17), 29.68 (C21), 28.40 (C29), 28.07 (C28), 27.27 (C23), 27.02 (C2), 26.69 (C15), 26.39 (C16), 23.14 (C27), 18.65 (C26), 17.46 (C6), 16.37 (C25), 15.57 (C24); HRMS (m/z): [M + H]+ calcd C39H62N3O5: 652.46895, found: 652.47377.
O), 128.58 (C12), 78.71 (C3), 71.96 (methoxyacetyl, CH2), 61.77 (C9), 59.12 (methoxyacetyl, CH3), 54.91 (C5), 48.06 (C18), 45.26 (C14), 43.90 (C20), 43.82 (C8), 43.26 (piperazinyl C), 39.10 (piperazinyl C), 37.69 (C4), 37.05 (C22), 33.07 (C10), 32.78 (C7), 31.76 (C17), 29.68 (C21), 28.39 (C29), 28.07 (C28), 27.27 (C23), 27.05 (C2), 26.68 (C15), 26.37 (C16), 23.15 (C27), 18.65 (C26), 17.46 (C6), 16.36 (C25), 15.57 (C24); HRMS (m/z): [M + H]+ calcd C37H59N2O5: 611.44240, found: 611.44608.
Bisamide (5) a white solid; yield, 53.7%; mp 211.4–212.0 °C. HRMS (m/z): [M + Na]+ calcd for C64H98N2NaO6: 1013.73226, found: 1013.73499.
:
1 CH2Cl2–methanol).A white solid; yield, 38.4%; mp 219.6–220.4 °C. HRMS (m/z): [M + Na]+ calcd for C50H64Cl2N2NaO5: 865.40900, found: 865.41315.
The molecular overlay program of the Discovery Studio 3.5 software was used to align moleculars and calculate molecular similarity according to the default parameter (50% steric field and 50% electrostatic field).
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: 10.1039/d0ra00681e |
| This journal is © The Royal Society of Chemistry 2020 |