Robert C. L. N.
Kramer
a,
Eleonoor J.
Verlinden
a,
Livia
Angeloni
ab,
Anita
van den Heuvel
c,
Lidy E.
Fratila-Apachitei
b,
Silvère M.
van der Maarel
c and
Murali K.
Ghatkesar
*a
aDepartment of Precision and Microsystems Engineering (PME), Faculty of Mechanical, Maritime, and Materials Engineering (3mE), Delft University of Technology, Mekelweg 2, 2628CD Delft, The Netherlands. E-mail: m.k.ghatkesar@tudelft.nl
bDepartment of Biomechanical Engineering (BME), Faculty of Mechanical, Maritime, and Materials Engineering (3mE), Delft University of Technology, The Netherlands
cDepartment of Human Genetics, Leiden University Medical Center (LUMC), Leiden, The Netherlands
First published on 28th November 2019
Microfluidic atomic force microscopy (AFM) cantilever probes have all the functionalities of a standard AFM cantilever along with fluid pipetting. They have a channel inside the cantilever and an aperture at the tip. Such probes are useful for precise fluid manipulation at a desired location, for example near or inside cells. They are typically made by complex microfabrication process steps, resulting in expensive probes. Here, we used two different 3D additive manufacturing techniques, stereolithography and two-photon polymerization, to directly print ready-to-use microfluidic AFM cantilever probes. This approach has considerably reduced the fabrication time and increased the design freedom. One of the probes, 564 μm long, 30 μm wide, 30 μm high, with a 25 μm diameter channel and 2.5 μm wall thickness had a spring constant of 3.7 N m−1 and the polymer fabrication material had an elastic modulus of 4.2 GPa. Using these 3D printed probes, AFM imaging of a surface, puncturing of the cell membrane, and aspiration at the single cell level have been demonstrated.
With the advent of the FluidFM technique,16 simultaneous precise force control and (sub)picolitre volume fluid manipulation inside a cell has become possible.17–20 The technique uses an AFM cantilever with an internal channel and aperture at the tip. These hollow microcantilever probes are fabricated by standard clean room microfabrication techniques with nanometer precise control over their shape and size.21,22 However, despite considerable progress in microfabrication, microfluidic AFM cantilever probes are not widely available due to the complex process steps leading to a high cost per probe. It takes at least two weeks of fabrication with about 6 masks depending on the process.19 They also need a fluidic interface to be attached before they are ready for use. Furthermore, exploring novel functional prototypes with existing process steps is an even more expensive endeavor.
3D additive manufacturing technologies have recently emerged as new bottom-up microfabrication methods for biological applications.23–25 They offer easy, rapid, and cost-effective prototyping and production. They also expand the design freedom (complex designs) and design space (in 3D) to directly print novel devices. Among many capable 3D-printing techniques, stereolithography (SL) and two-photon polymerization (2PP) are able to print with micro- and sub-micrometer resolution, respectively.23 In both techniques, light illuminates a liquid (positive)negative photoresist, thereby locally (de)polymerizing it to form a solid structure. Commercial SL-systems are able to fabricate objects that can be several cubic centimetres in size with an accuracy of 20 μm,26 and single- and two-photon polymerization set-ups have reached feature sizes of 430 nm (ref. 27) and 9 nm (ref. 28), respectively. These 2PP nanometer feature sizes come at the cost of printing speed, hence combination with SL-printing is desirable from a time reduction point of view.
Using 2PP, the following structures have been printed by others: embedded microfluidic channels with internal pillars to trap biological entities,29 a doubly-clamped suspended microchannel resonator,30 and custom designed AFM tips on commercial tip-less cantilevers.31 Furthermore, 2PP printing has been combined with SL printing to print a micro-filter.32 However, to the best of our knowledge, a complete polymeric microfluidic AFM cantilever as a ready-to-use device has not been printed so far.
In this work, several types of microfluidic AFM cantilevers were directly printed onto an SL-printed fluidic interface. Their functionality was proved by using them to image surface topography, dispense fluid, puncture cells, and aspirate selected cell(s).
The fluidic interface part was printed using standard system settings. The dimensions of the interface were chosen such that it fits in the AFM holder. After printing, all unwanted resin residues were removed from inside and outside the channel by blowing compressed air and two minutes of ultrasonic cleaning in isopropyl alcohol (IPA). Tygon® (ID 190.5 μm, OD 2 mm) tubing from Cole-Palmer was used as a connection to the fluidic interface from the “external world”. The design details are given in the ESI,† section 1.
To print the cantilever, the SL-printed interface was taped on an indium-tin-oxide (ITO) coated glass slide and mounted in the 2PP-printer. Then, a drop of resist was placed covering the area where polymerization was desired including the surrounding glass surface. The 2PP system can automatically find the smooth ITO interface on the glass surface. However, the surface of the SL-printed part was not smooth and it was therefore difficult to automatically identify its surface. Determining the surface height of the SL-printed interface was crucial to get a good seal between the SL-printed polymer and 2PP printed polymer. The height of the top side of the SL-printed surface was identified by printing 10 × 10 × 40 μm pillar structures in incremental height steps across the surface. A correct height was found when the printed pillar remained undeformed and attached to the surface when the stage repositions itself for the printing of the next pillar. After the surface was identified, the scan speed and laser power were optimized. All the optimized parameters used for printing are given in Table 1 and more details on this printing strategy are given in the ESI,† section 2.
Laser power | 20 mW |
Scanning speed | 60 mm s−3 |
Objective | 25× NA 0.8 |
Slicing distance | 0.5 μm |
Hatching distance | 0.3 μm |
Contour count | 3 |
Contour distance | 0.2 μm |
2PP printing was done in four different parts connected with each other: a structured base, yurt, hollow cantilever, and tip (with or without an aperture), see Fig. 1. A structured base (see the ESI,† section 2) with a large surface area was chosen to be printed on the SL-printed part. This base structure was crucial to get a good seal between the two polymers of both printing methods. On this base, a yurt-shape structure was printed and this particular shape was chosen to reduce the printing time, as compared to a dome. The hollow cantilever was then printed attached to this yurt as a series of overlapping vertical square slices positioned at an angle. Finally, the desired tip shape was printed.
The interface was designed with a thickness of 400 μm and a channel size of 150 × 90 μm. The interface had an extension for attaching the tubing to the “external world” for future downstream analysis of aspirated intracellular factors. There were also two guide/protection bars around the extension to insert a 2 mm OD and 200 μm ID Tygon tube, see Fig. 2A. The channel took a 90 degree turn inside the interface in the front for the fluid connection to the cantilever. Even though the channel size was designed to be uniform throughout the interface, it turned out to be printed narrow near the exit (Fig. 2B), possibly due to undesired exposure at this 90 degree overhang. Even though a rectangular channel was designed, the outcome was a circular channel of 100 μm diameter (Fig. 2C) because it was at the resolution limits of the SL-printer. It should also be noted that the resolution limits differ between external features and internal voids such as microchannels. This difference is due to partial exposure of the unpolymerized resin inside the channels, which is influenced by the type of resin, number of printed layers above the channel, and channel dimensions.35,36
To increase the sealing strength and avoid coalescence of any small bubbles that may form during a continuous writing process, open spaces were written in the base structure in a discontinuous circular pattern. This structured base layer in the form of a doughnut shape with a 400 μm outer diameter and 100 μm inner diameter was printed around the aperture of the fluidic interface (see Fig. 3B). The random dark spots in the figure are locations where laser ablation occurred. The regular gaps in the base structure reduced the chances of coalescence of the bubbles that were formed by the laser ablation. These bubbles remained localised in the gaps and eventually disappeared. In fact these tiny dark spots gave a visual confirmation that 2PP writing was happening at the interface ensuring a good seal. The corresponding CAD drawing of the doughnut shape structure is given in the ESI,† section 2.
On top of the doughnut-shaped base structure surface, a yurt-shaped structure was printed. Printing time for the doughnut base and yurt was approximately 50 minutes. Near the top of the yurt, the hollow cantilever was printed. The cantilever was printed in vertical overlapping slab slices instead of horizontal layers, for the reason that when these horizontal layers were attempted, the very first printed layer of a slender cantilever with dimensions of 500 μm × 30 μm was highly compliant due to its single voxel thickness (approximately 650 nm (ref. 34)). This layer was displaced during printing of the subsequent layers leading to discontinuous layers and a leaky channel surface structure. By printing in vertical slab slices this compliant initial layer problem was resolved. However, vertical printing was hindered by a shading effect, which occurs when structures are printed close together. One structure casts a shadow that reduces the amount of laser illumination in the shaded areas, effectively blocking parts of the other slab structures being printed. This was resolved by printing vertical slab structures at a 55° angle. Slab sizes of 5 μm and 3 μm thickness were tested and results of various writing tests performed are given in the ESI,† section 2.
The resulting full device with superimposed CAD drawings of the corresponding designs is shown in Fig. 4. The different cantilever types (type 1, 2, 3, and 4) with different tip shapes are also shown. The dimensions, volume, and stiffness of all cantilever types are given in Table 2. Note that cantilever type 5 (shown in Fig. 5) was a tipless version of cantilever types 2 and 3. It was printed in slab slices of 3 μm instead of 5 μm which resulted in a longer printing time. The sizes of the multi nuclear cells used in this work (human myoblasts/myotubes) ranged between 50 and 500 μm long, with nuclei sizes of about 10 μm in diameter. The dimensions for the cantilever tips and apertures were chosen such that an entire cell (a myoblast) or nucleus (from inside a myotube) could be non-destructively aspirated. This could be useful in the analysis of facioscapulohumeral muscular dystrophy disease etiology and development.38
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Fig. 4 A. The entire 3D-printed device with the transparent yurt and cantilever. B. Zoomed-in SEM-image of the yurt and cantilever, showing the difference in resolution between the SL printed interface (with ridges) and 2PP printed yurt and cantilever. C. Zoomed-in image of a type 1 cantilever tip. The figures D, F, and H show cantilever types 2, 3, and 4, which were all 30 × 30 × 500 μm in dimensions. The first three cantilever types were printed in 5 μm slices that overlap each other by 1 μm. The type 2 cantilever had a sharp tip (E) that was used for AFM imaging and a side aperture of 25 μm on the pyramid wall in the front. The type 3 cantilever (G) had a 87° angled sharp tip and a side-aperture of 25 μm diameter next to the tip. The type 4 cantilever (I) was not printed in slices, but as a single entity with the parameter settings from Table 1. Its tip was printed at an angle of 30° with a 10 μm aperture at the apex. |
w (μm) | h (μm) | l (μm) | t w (μm) | d i (μm) | V i (pl) | k (N m−1) | |
---|---|---|---|---|---|---|---|
Type 1 | 20 | 20 | 255 | 5 | 10 | 20 | 10.6 |
Type 2 | 30 | 30 | 552 | 2.5 | 25 | 271 | 3.9 |
Type 3 | 30 | 30 | 564 | 2.5 | 25 | 277 | 3.7 |
Type 4 | 30 | 30 | 553 | 2.5 | 25 | 271 | 3.9 |
Type 5 | 30 | 30 | 350 | 2.5 | 25 | 172 | 15.5 |
The printing time for the cantilever and tip depended on its type: the type 1 cantilever took ∼10 minutes to print, types 2 and 3 took ∼25 minutes, type 4 took ∼8.5 minutes, and type 5 took ∼35 minutes. After printing, they were placed in the developer for 48 hours at room temperature to ensure full development even inside the channels. Many devices were developed simultaneously to save on the total fabrication time. However, the printing method can be further automated and optimized together with other strategies that have been developed by others to decrease the printing time.30
The experimental values in Table 3 were obtained through LDV measurements on a type 5 cantilever and are compared with the analytical- and finite element models. A possible explanation for the discrepancies between them is that the elastic modulus depends on the degree of crosslinking between monomers, which, in acrylate-based photoresists, depends on the writing speed and laser power.39
The stiffness has been calculated analytically as , where E is the elastic modulus, I is the moment of inertia, and l is the length of the cantilever. The moment of inertia of a rectangular cross-section cantilever with a circular hole is given by
, where wo, ho and ri are the cantilever width, cantilever height, and channel radius, respectively. The eigenfrequency is given by
, where m* is the effective mass of the cantilever, m* = 0.24 m = 0.24 × rho × (Vcl − Vch), with ρ, m, Vcl, and Vch being the 2PP polymer density, cantilever mass, cantilever volume and channel volume, respectively. The volumes are calculated as Vcl = l × w × h and Vch = π × r2 × l.
A quality factor of 174 was measured in air under ambient conditions. This value is about three times larger than a 2PP-written doubly clamped suspended hollow SU-8 structure (Q ∼ 60).30 The fact that the 2PP-printed cantilever is only singly clamped could be one of the reasons for the higher quality factor, as energy dissipation through the supports only occurs on one side. For a U-shaped SiO2 hollow cantilever of 155 μm long, a 3.7 μm × 2.2 μm channel cross section and a wall thickness of 1 μm with a stiffness of 4.3 N m−1 had a quality factor of 457 in air.17 The low quality factor in the polymer cantilever is mainly due to more energy dissipation in the low elastic modulus material (4.2 GPa for the 2PP polymer compared to 87 GPa for SiO2). The large quality factors are important to obtain high sensitivity if used as a mass sensor.40
To test for any leakage, the cantilever was filled with deionised water by applying a constant flow rate of 10 μL min−1 with a syringe pump (SP100i, WPI Inc.). The frames at different time instances from a movie (see ESI† Movie M1) are shown in Fig. 6. The hydraulic model of the system is shown in the ESI,† section 3.
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Fig. 6 Fluid flow inside the channel at different instances of time. The yurt, transparent cantilever and tip aperture can be seen. The moving meniscus inside the channel is indicated by the white arrows. The corresponding video is shown in ESI† Movie M1. |
From Fig. 4E the tip radius was measured to be 2.5 μm for a type 2 cantilever. This radius can be further reduced by printing it using a microscope objective with a higher magnification than the 25× objective used here, for example 63×. Others31 have 3D-printed cantilever tips with a radius of 25 nm, which is comparable with tip radii of silicon AFM cantilevers fabricated by standard microfabrication.41
The deflection sensitivity of the cantilever was calibrated with the contact method, i.e., by acquiring a deflection vs. displacement curve on a glass surface, and it was found to be 33.9 nm V−1. The Hertz contact mechanics model was used to calculate the elastic modulus of the cell.42 The tip was considered spherical with a tip radius of 5 μm. By fitting the first part of the curve, i.e. the part of the curve which is not affected by the underneath rigid substrate (indentation depth 200 nm), the elastic modulus of the cell was calculated to be 44.3 kPa. Comparable values between 11.5 kPa and 45.3 kPa have been reported for in vitro differentiated myogenic cell cultures.43 The kink in the graph is an indication of the puncture of the cell membrane. Typically it is expected to see two kinks due to the top and bottom bilayers of the cell membrane, however only one is observed here. This could be because of high cantilever stiffness, or perhaps the top bilayer is pushed to the bottom bilayer and the rupture of both is measured as a single puncture event.
With the same type 3 cantilever a desired location for aspirating a cell was chosen and approached until it was near the cell membrane surface. An under-pressure of 1 bar was applied and the targeted myotube was aspirated. As other cells were also in contact with the aspirated cells, more cells got aspirated, resulting in detachment of more than one cell from the surface of the Petri dish (Fig. 9). A video of this is added as ESI† Video M2.
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Fig. 9 Different instances of time during the cell aspiration procedure. The white circle indicates the aspirated portion of differentiated muscle cells. See ESI† Video M2. |
The major advantage of 3D printing of microfluidic polymeric AFM cantilevers is the reduction of fabrication and prototyping time and the increase in design freedom as compared to standard clean room microfabrication. The SL- and 2PP printing takes about 90 min in total to print a single device. The developing process after 2PP printing took about 48 hours to ensure full development of the narrow channels; however, this process can be further optimized resulting in reduced developing time. Some of the designs that are impossible (or difficult) by standard lithography processes become possible with these 3D printing methods. As the devices are made out of polymer, they have a low elastic modulus (4.2 GPa) and hence have higher damping and a lower quality factor compared to their silicon counterparts. Once the parameters are optimized for both printing methods, the settings can be used to produce many devices with all the design freedom, including in 3D. The SL based printers are affordable and have become ubiquitous but 2PP based printers are quite expensive. However, 2PP based printers are becoming more popular and hopefully will become cheaper eventually. So for now, the devices could be ordered from 2PP print service providers at a low cost, simply by submitting a design drawing. At the outset, the multi scale printing (combining SL and 2PP printing) will still outweigh the high infrastructure maintenance cost of a cleanroom and very limited design freedom of the standard lithography based microfabrication, at least for design prototyping and small volume production. Overall, 3D additive manufacturing is a rapid and cost effective way of printing microfluidic AFM cantilevers useful for many applications.
Footnote |
† Electronic supplementary information (ESI) available: Movie M1 – dispensing cantilever. Movie M2 – live cell aspiration. Additional information and figures for the fabrication, cantilever slicing, adhesion experiment, and hydraulic model. See DOI: 10.1039/c9lc00668k |
This journal is © The Royal Society of Chemistry 2020 |