Open Access Article
Subhadeep De
,
K. Kunal and
N. R. Aluru*
Department of Mechanical Science and Engineering, Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA. E-mail: aluru@illinois.edu
First published on 19th January 2017
Using dissipation models based on Akhiezer theory, we analyze the microscopic origin of nonlinearity in intrinsic loss of a single layer MoS2. We study the intrinsic dissipation of single layer MoS2 under axial and flexural mode of deformation using molecular dynamics (MD) simulation. We compare the amplitude scaling of intrinsic dissipation for both the cases with our proposed model. In the axial deformation case, we found a higher (4th) order dependence of dissipation on the strain amplitude. This nonlinearity is shown to stem from the strain dependence of the phonon mode Grüneisen parameter (PMGP) and is accounted for in our dissipation model. In the flexural deformation case, dissipation is found to have a stronger dependence (≥4) on the amplitude of the transverse motion. This nonlinearity can be explained by considering the coupling between out-of-plane motion and in-plane stretching. The proposed model for the flexure deformation case, which accounts for both kinds of nonlinearity, provides a good estimate of dissipation.
Akhiezer damping is a dominant intrinsic loss mechanism for nanoscale resonators operating at gigahertz frequencies.25 This takes place as a result of interaction of mechanical deformation with the modes of thermal vibration, called phonons. An applied strain field can couple with the phonon modes, and thus modulate their frequencies.26,27 The fractional change in phonon frequencies is proportional to the strain. In the case of flexural deformation with fixed boundaries, the out of plane motion may accompany in-plane stretching due to the geometric effect. Consequently, the strain at each section may have a second and higher order dependence on the amplitude of transverse motion. Hence, the coupling between the out-of-plane motion and phonon modes is effectively nonlinear. Though this is a common scenario in the case of flexural deformation of clamped 2D structures like graphene and MoS2, its effect on intrinsic dissipation has not yet been explored. Previous studies have shown that, in the case of graphene, which is one atomic layer thick, the unstable out of plane modes28 and the edge atoms29 play a major role in intrinsic dissipation. But very few studies have been directed towards investigating dissipation in a single layer MoS2.30–32 This work focuses on studying the underlying physics behind intrinsic dissipation of single layer MoS2 using MD simulation. A simplified dissipation model is introduced which is based on the physical mechanism. Using this model, the effect of nonlinearity on intrinsic dissipation is investigated and compared under different modes of deformation.
MD simulations have been previously employed to study intrinsic dissipation in nano-structures.25 Axial deformation of beams at gigahertz frequencies is characterized by a homogeneous strain field. In this case, intrinsic dissipation is explained using Akhiezer theory.33 On the other hand, flexural deformation of thin beams involves a linearly varying strain along the transverse (thickness) direction. This results in thermoelastic damping,34,35 in addition to Akhiezer damping. Flexural deformation of thin 2D structures with fixed boundaries induces a strain field that is different from that in beams. In the membrane limit, the 2D structure provides negligible resistance to bending forces and undergoes stretching along its plane.36 A single layer MoS2 exhibits this behavior and will be an interesting candidate for study of intrinsic dissipation. In this work, we employ MD simulation to study intrinsic dissipation in a single layer MoS2. We first show that the intrinsic dissipation during in-plane straining of a single layer MoS2 can be explained using Akhiezer theory. A simplified dissipation model is developed. This model shows good agreement with frequency and amplitude scaling of dissipation in MoS2 under in-plane deformation. Then, we extend this framework for dissipation under flexural deformation by incorporating the geometric effect. A closed form expression for dissipation under flexural deformation is derived. It has atleast fourth and higher order dependence on the amplitude of transverse motion, which shows that the dissipation is indeed nonlinear. Using this expression, the net intrinsic dissipation during flexure deformation can be accurately estimated.
sin(Ωt) in the positive and negative x direction respectively, as shown in Fig. 1a. Here Ax is the amplitude of oscillation and Ω is the deformation frequency. Using the results from continuum mechanics, the in-plane displacement field generated in the 2D sheet can be expressed as36
. Lc denotes a length scale25 given by
and Am is the amplitude of axial motion which depends on Ax. The angular frequency of oscillation of the fundamental longitudinal mode of the resonator of given length L0 is
. Considering a deformation frequency much smaller than the fundamental frequency (Ω ≪ ωc) of the resonator would imply Lc ≫ L0. Under this condition, the displacement field along the length of the resonator is approximately linear in
given by
. Further, using the boundary conditions at L0, we can write,
. The linearity in the displacement field results in a spatially uniform strain field in the structure. The periodic strain field can be represented as ε = εa
sin(Ωt), with the strain amplitude
.
In case of flexural deformation, the sheet is subjected to a uniformly distributed load f(t) = f0
sin(Ωt), in the z direction as shown in Fig. 1b. The resulting displacement field along the x and z direction is denoted by u(x) and w(x) respectively. From continuum theory, the dominant mode shape of deformation due to forcing under the assumed boundary condition is given by36 w(x,t) ∼ Az
sin(πx/L0)sin(Ωt) and u(x,t) ∼ 0. Here, Az is the amplitude of flexural motion which depends on f0. Under this mode of deformation, each section along the length of the MoS2 sheet undergoes stretching. The corresponding strain field in the structure is
, where
and α(x) = cos(πx/L0). Unlike the axial case, the strain field in the flexure case is non-uniform along the length of the MoS2 sheet. These strain fields serve as an input to calculate the net intrinsic dissipation in the MoS2 sheet under each case of deformation.
(ref. 37) is defined as the phonon mode Grüneisen parameter (PMGP). For a time varying strain field with frequency Ω, if Ω ≪ ωμ, the ratio Eμ/ωμ is constant.38 Using this and the coupling relation, we can write
, where (·) denotes derivative with respect to t. Again, the phonon modes can exchange energy due to anharmonic coupling. This coupling governs the relaxation of perturbed energy of the phonon system towards a new equilibrium. Usually each phonon has its own time scale of relaxation,27 τμ. The phonon relaxation mechanism can be approximated as
, where Ē is the mean energy of the phonon system at that instant. Thus, the modulation of phonon energies due to straining and relaxation process can be written as
![]() | (1) |
To simplify the system of phonon modes, we employ the phonon grouping technique39 and derive an expression for dissipation. The mean Grüneisen parameter of the ensemble of phonons is defined as
, where N is the total number of phonon modes. The phonon modes with γμ <
constitute the ‘hot’ phonon group and the rest with γμ ≥
constitute the ‘cold’ phonon group. The average Grüneisen parameter of the ‘hot’ phonon group is denoted as γh and that of the ‘cold’ phonon group as γc. During the relaxation process, the energy exchange takes place between the ‘hot’ and ‘cold’ phonon group with a collective relaxation time τph. For a space dependent strain field, ε(x,t), the set of equations governing the energy evolution of the phonon groups at any section of the MoS2 can be expressed as
![]() | (2) |
. Here i denotes the ‘hot’ (h) and ‘cold’ (c) phonon group.
denotes the mean energy of the phonon system at x. Eqn (2) leads to two equations. Adding and subtracting them, we get a set of equations,
![]() | (3a) |
![]() | (3b) |
.
denotes the energy difference between the phonon groups at x. Eqn (3a) and (b) denotes the rate of change of mean energy of the phonon system and the rate of energy exchange between the phonon groups respectively, at any position x. The treatment of energy relaxation in our formulation accounts for the spectral flow energy i.e. flow of energy between different modes. In the case of a spatially inhomogeneous strain field, there also exists a spatial energy gradient given by
, where (′) denotes derivative with respect to x. The time scale of energy relaxation due to the spatial flow of energy corresponds to the thermal diffusion time34 τtd. In our case, this relaxation mechanism is weak because τtd ≫ 1/Ω and can be ignored. Thus, the energy modulation and redistribution in the structure is microscopically governed by the set of eqn (3a) and (b).
In case of axial deformation, the strain field is found to be spatially uniform i.e. ε(x,t) = εa
sin(Ωt). The PMGP can be strain dependent if the material behaves nonlinearly.40 Assuming a linear dependence on strain (discussed further in Section IV A), γi can be expressed as γi = γ0i + γ1iε, where γ0i and γ1i are the material constants. Initially, before imparting any deformation, the mean energy of the phonon system satisfies
and the energy difference between the phonon groups satisfy
. Considering Δe(x,t) ≪ kBT during the deformation process, ē(x,t) can be approximately solved using the set of eqn (3a) and (b). At steady state, the energy dissipated over the nth period of deformation is given by D = ē(x,Tn+1) − ē(x,Tn), where
and Tn = nT. The closed form expression of dissipation, in the axial case, thus obtained, is, Da(x,θ) = πkBT(Da00(θ)εa2 + Da11(θ)εa4)/L0. Here, θ = Ωτph is a metric that determines the strength of the Akhiezer mechanism and
. Integrating over the length L0, we get the total dissipation in the structure as| Eadiss = πkBT(Da00(θ)εa2 + Da11(θ)εa4) | (4) |
The 4th order dependence of dissipation on strain amplitude, as shown in eqn (4), is due to strain dependence of the PMGPs. Later in this study, eqn (4) will be used to compare the frequency and amplitude scaling obtained from MD results.
In the case of flexural deformation, the space dependent strain field, as discussed in Section II A, is given by ε(x,t) = εfα(x)2sin(Ωt)2. The strain dependent PMGPs can then be expressed as γi = γ0i + γ1iε(x,t). The dissipation, which is a function of both position and θ in this case, is obtained as Df(x,θ) = πkBT(Df00(θ)α4(x)εf2 + Df01(θ)α6(x)εf3 + D11(θ)α8(x)εf4)/L0. Here, the θ dependent terms are
The total dissipation in the structure Efdiss, is obtained by integrating Df(x,Ω) over the length L0. Efdiss is given by
![]() | (5) |
Eqn (5) shows that due to geometric nonlinearity, dissipation during flexure mode of vibration has atleast 4th and higher order dependence in the amplitude of transverse motion. This expression will be used later to estimate dissipation in the flexure case and compare with MD results.
First, a MoS2 sheet, of dimension 56.16 Å along the x direction and 64.86 Å along the y direction is considered. The sheet is subjected to 5% in-plane pre-straining to prevent any warping or buckling. This is done by scaling the x and the y coordinates of the atoms in the 2D sheet. The pre-stretched sheet is equilibrated to 300 K for 2 ns using Nosé–Hoover thermostat44 with a time constant of 0.1 ps. After equilibration, the structure is further evolved for 2 ns under microcanonical ensemble (with out any thermostat) and atomic trajectories are dumped every 20 fs. The atomic trajectories are used to calculate the PMGPs and energy relaxation time of MoS2 at 300 K.
In order to calculate dissipation under axial mode, the simulation box is deformed along the x direction about its center-of-mass at a given frequency and strain amplitude (shown in Fig. 1a). The structure is evolved under microcanonical ensemble for 100 periods of deformation. The average change of internal energy over the periods of deformation gives a measure of intrinsic dissipation. In the current study, the axial deformation is carried out at frequencies ranging from 5 GHz to 50 GHz at 2% strain amplitude. Dissipation is calculated for strain amplitudes ranging from 1% to 3.5% at 10 GHz.
For the flexural mode of deformation, a MoS2 structure of length 65.68 Å along x direction and 65.01 Å along y direction is considered. The total force on the atoms inside a strip of 5.49 Å at each end along the x direction is set to zero which acts as clamped boundary condition (shown in Fig. 1b). The rest of the atoms are subjected to periodic forcing in the z direction. In our simulations, the forcing frequency is set to 10 GHz and the force applied on each Mo atom of the MoS2 sheet is varied from 0.035 eV Å−1 to 0.046 eV Å−1. The system is evolved under microcanonical ensemble for 100 periods of deformation in order to calculate dissipation.
The allowable in-plane wave vectors can be represented as
. Here m and n refer to the mode number or order which takes positive integral values. L0 and B0 are the lengths of the MoS2 sheet in the x and y direction with corresponding unit vectors êx and êy respectively. Using linearized membrane theory, the mode shape corresponding to a wave vector
can be expressed as ϕ(
) = ![[P with combining right harpoon above (vector)]](https://www.rsc.org/images/entities/i_char_0050_20d1.gif)
exp(j
·
0), where
is the polarization vector and
0 = x0êx + y0êy + z0êz is the mean position vector of the atom. We denote the velocity of the atoms in x, y and z directions as vx, vy and vz. The out-of-plane modal velocities are then given by
, where
is the normalizing factor. p sums over all the atoms in the structure. The in-plane modal velocities can be approximated as
. Using the atomic velocities from MD, the time series of Vom,n(t), Vi-xm,n(t), Vi-ym,n(t) can be computed for different values of m and n. By taking FFT of the auto-correlation of these time series data, the frequencies ωm,n for different modes can be resolved. If the structure is plane strained along the x direction, these frequencies are subject to change. The PMGPs can be estimated46 as
. Here, the subscript 0 and Δε represent the reference and the strained configuration, respectively. The frequencies ωΔεm,n can be calculated for different values of Δε in order to obtain strain dependence of the PMGPs. The PMGPs, then, can be used to perform the phonon grouping.
), we can say that the out-of-plane modes will undergo high positive change in temperature with tensile strain. These modes therefore, primarily constitute the ‘hot’ phonon group. By similar reasoning, looking at the in-plane PMGPs in Fig. 2a and b, we can classify them as the ‘cold’ phonon group. Hence, the relaxation process will involve energy exchange between out-of-plane and in-plane modes.
The time scale of relaxation during the non-equilibrium process can be estimated from the energy fluctuations at equilibrium.48 In this case, fluctuations in total energy of all the out-of-plane modes should be considered. For ease of computation, we deal with the kinetic part of the total energy. Its auto-correlation follows the same decaying behavior as the total energy, but is oscillatory in nature. The total kinetic energy EK of all the out-of-plane modes can be related to the z component of the kinetic energy of each atom as
, where p sums over all the atoms. EK(t) is calculated using the atomic trajectories from equilibrium MD simulations for a time length of 2 ns. The normalized auto-correlation of the fluctuations in EK(t) can be computed as
where δEK(t) = EK(t) − 〈EK(t)〉. The envelope of R(t) displays an exponential decay as shown by the solid line in Fig. 3. The timescale of decay, which indicates the energy relaxation time τph can be calculated as
, where εR(t) is the envelope of R(t). In this case τph, is estimated to be 5.24 ps. The τph, thus extracted from the equilibrium MD simulations, serves as direct input to our dissipation model.
![]() | ||
| Fig. 4 (a) Scaling of dissipation of the single layer MoS2 with frequency of axial deformation at 2% strain. The red circles with error bars correspond to results from MD simulation. The black solid line is the curve-fit using eqn (4). (b) Scaling of dissipation with amplitude of axial strain at 10 GHz. The red circles with error bars correspond to the MD results. The black solid line is the dissipation estimated using eqn (4) as a function of strain. | ||
We, now, try to validate our model for the axial case by comparing the scaling of dissipation with strain amplitude. At Ω = 10 GHz, for εa varying from 1.5% to 3.5%, dissipation obtained using our model (eqn (4)) is in good agreement with the MD results. The comparison is shown in Fig. 4b. The 2nd term in eqn (4), which is 4th order in εa is the nonlinear damping term. At higher strain amplitudes (say εa = 3%), a significant part of the total dissipation (∼55%) is due to nonlinear damping. From eqn (4), it is evident that the relative importance of nonlinear damping depends on |Δγ1εa|. For the cases where |Δγ1εa| ≫ |Δγ0|, the dissipation will be essentially nonlinear.
We, now, look at flexural deformation. Under transverse loading, the deformation profile can be approximated by the fundamental flexural mode and is fitted with Az
sin(πx/L0) for Az, where L0 = 54.56 Å. Az increases linearly with the forcing magnitude as shown in Fig. 5a. In the flexure case, Az = 4.47 Å for the maximum forcing considered, which corresponds to a strain amplitude εf = 3.3% close to the edges (x = 0). Taking pre-strain into account, the final state of strain in the structure at any instant is well below the maximum intrinsic strain limit for MoS2.12 Using MD, net dissipation for the structure is obtained for different forcing amplitude at 10 GHz. The plot of dissipation versus Az is shown in Fig. 5b. Inserting the set of previously evaluated parameters in our model for the flexure case (eqn (5)), the estimated dissipation compares well with those obtained from the MD simulation. The lowest order nonlinearity (1st term) in eqn (5) is solely due to the geometric effect which arises from coupling of out-of-plane motion and in-plane stretching. While the last two terms in eqn (5) has the effect of both material and geometric nonlinearity. To get an idea, for flexural deformation with a transverse force which corresponds to Az = 4 Å, the percentage contributions of the 1st, 2nd and 3rd term to total dissipation are ∼29.5%, ∼47.6%, ∼22.8% respectively. The closed form expression for the flexure case shows some interesting behavior. For example, for cases when Δγ0Δγ1 < 0, the 2nd term in eqn (5) has a negative contribution to the total dissipation. Thus, for those cases where the 2nd term is relatively important and negative, it can lead to decrease in dissipation with the increase in Az. It would be useful to identify the cases where this holds true and use it for designing high quality factor nonlinear resonator.
![]() | ||
| Fig. 5 (a) Variation of Az (left axis) and εf (right axis) with transverse loading f0 as obtained from MD simulation. (b) Scaling of dissipation with amplitude of flexural deformation of the single layer MoS2 at 10 GHz. The red circles with error bars correspond to the MD result. The black solid line is the dissipation estimated using eqn (5) as a function of Az. | ||
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