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Correction: Zn2+ and Cd2+ cationized serine complexes: infrared multiple photon dissociation spectroscopy and density functional theory investigations

Rebecca A. Coates a, Georgia C. Boles a, Christopher P. McNary a, Giel Berden b, Jos Oomens bc and P. B. Armentrout a
aDepartment of Chemistry, University of Utah, Salt Lake City, UT 84112, USA
bRadboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7c, NL-6525ED Nijmegen, The Netherlands
cvan't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, NL-1098XH Amsterdam, The Netherlands

Received 16th June 2017 , Accepted 16th June 2017

First published on 29th June 2017


Abstract

Correction for ‘Zn2+ and Cd2+ cationized serine complexes: infrared multiple photon dissociation spectroscopy and density functional theory investigations’ by Rebecca A. Coates et al., Phys. Chem. Chem. Phys., 2016, 18, 22434–22445.


Although the overall conclusions of the original article remain unaffected (no experimental or theoretical IR spectra are changed, nor is any calculated thermochemistry at 0 K), the thermal corrections to the Gibbs free energy at 298 K were mistakenly overestimated. Corrected 298 K free energies are given below in Tables 1, 3 and 4 from the original manuscript. Because the 298 K values were only slightly modified from the published values, we have not corrected the many references to relative energies in the text, except those noted below. Using the correct values, the ion population analysis for the two lowest energy isomers of the [Zn(Ser-H)ACN]+ complex is altered. Using the correct 298 K ion population analysis, the following corrections are made to the publication.
Table 1 Relative free energies at 298 K kJ mol−1 of [Zn(Ser-H)ACN]+ conformersa
Structure B3LYP B3LYP-GD3BJ B3P86 MP2(full)
a Calculations performed at the stated level of theory using a 6-311+G(2d,2p) basis set. Geometries and vibrational frequencies calculated at the B3LYP/6-311+G(d,p) level. s = side-chain. b Salt bridge between NH3+ and COO groups.
[N,CO,O]tgg 0.0 0.0 0.0 1.7
[N,CO,OH]ggt 2.4 0.2 4.5 0.0
[N,CO,O]cgg 25.0 24.2 24.6 27.4
[N,Os]tgt 38.4 42.6 44.1 47.9
[N,CO]tgt 37.5 41.4 43.5 45.1
[N,CO]gtt 35.6 39.3 41.7 44.4
[N,OH,O]tgg 41.2 39.8 44.8 40.3
[CO,O]ctcb 49.2 51.5 54.0 56.5
[CO,O]ctc 56.6 61.5 61.1 66.6
[N,CO]tgg 54.4 57.9 60.0 65.1
[N,CO,OH]tggt 58.0 59.2 60.5 57.2
[CO,O]tgg 58.8 64.5 66.9 77.2
[CO,O]tgg 59.3 65.2 67.3 77.0
[CO,O]ttg 59.5 63.9 67.9 78.1
[N,CO]tggg 65.0 70.5 70.2 73.7
[CO2]ggg 73.9 85.4 81.7 88.5
[CO2]ggt 77.0 89.9 86.3 90.7
[CO,O]cgt 72.8 73.9 79.1 80.2
[CO2]gtg 80.6 93.8 88.8 100.9
[OH,O]tgg 112.3 117.1 124.8 126.4


Table 3 Relative free energies at 298 K kJ mol−1 of low-lying conformers of [Zn(Ser-H)]+a
Structure B3LYP B3LYP-GD3BJ B3P86 MP2(full)
a Calculations performed at the stated level of theory using a 6-311+G(2d,2p) basis set. Geometries and vibrational frequencies calculated at the B3LYP/6-311+G(d,p) level. s = side-chain. b Salt bridge between NH3+ and COO groups.
[N,CO,O]tgg 0.0 0.0 0.0 0.0
[N,CO,OH]ggt 15.0 13.4 17.9 10.0
[N,CO,O]cgg 21.7 21.2 21.2 21.9
[N,Os]tgt 45.7 48.6 53.6 54.4
[N,CO]ggt 58.1 60.7 66.1 63.0
[N,OH,O]tgg 45.5 43.7 49.8 41.7
[CO,O]ctcb 47.6 49.3 54.1 53.4
[CO,O]ctc 66.8 70.8 70.8 84.6
[N,CO,OH]tggt 51.1 52.4 54.4 52.5
[CO2]ggg 95.1 106.6 113.2 148.2


Table 4 Relative free energies at 298 K kJ mol−1 of CdCl+(Ser) conformersa
Structure B3LYP B3LYP-GD3BJ B3P86 MP2(full)
a Calculations performed at the stated level of theory using a def2-TZVPP basis set. Geometries and vibrational frequencies calculated at the B3LYP/def2-TZVP level. s = side-chain. b Salt bridge between NH3+ and COO groups. c Salt bridge between NH3+ and Os groups.
[N,CO,OH]tggt 0.0 0.0 0.0 0.0
[N,CO]tcgt 12.0 17.8 13.7 23.1
[CO2]cggtb 13.9 25.6 16.9 27.0
[N,CO]tgtt 17.4 22.4 19.0 28.5
[CO2]cgttb 15.7 28.0 19.7 30.6
[N,CO]tgtg 19.0 23.7 20.6 31.2
[N,OHs]tgtt 24.5 28.8 27.5 31.8
[N,CO,OH]cggt 28.2 27.8 27.8 29.6
[N,OH,OH]tggt 29.4 27.8 31.7 26.4
[N,OHs]tttt 33.7 38.1 37.6 41.7
[CO,OHs]cggt 41.9 48.4 44.3 60.2
[N,CO]tcgg 43.6 50.2 45.3 59.7
[COOH]cggt 45.6 58.6 48.0 66.2
[CO2]cgggb 45.3 56.8 49.0 62.5
[N,OH]ttgt 53.6 57.8 57.4 59.4
[CO,OHs]ggtb 58.0 63.2 59.3 71.5
[CO,OHs]ttgt 57.6 63.5 64.3 78.3
[N,OH]tttt 58.0 62.7 62.6 62.5
[CO,OHs]ctct 59.7 65.1 62.3 75.9
[CO,OHs]tggt 56.0 63.3 62.3 76.4
[N,OHs]cgtt 60.8 64.2 63.2 68.9
[Os]cggtc 60.8 72.4 64.3 75.5
[OHs]ttcc 99.0 111.1 103.8 124.4
[OH,OH]tggg 112.7 117.9 122.7 127.5
[OHs]tggc 131.3 143.5 141.3 154.6


Page 22438, second paragraph, corrected: “In contrast, as seen in Table 1, the presence of the ACN ligand stabilizes the [N,CO,OH]ggt conformer such that it would populate between 14–48% of ions at 298 K.”

Page 22440, seventh paragraph, corrected: “This result is consistent with the relative free energies calculated at the MP2(full) level of theory, which indicate that [N,CO,O]tgg can account for 33% of an equilibrated ion population at 298 K.” In the published manuscript, we concluded that a superposition of the [N,CO,O]tgg and [N,CO,OH]tgg linear IR spectra best agreed with the experimental spectrum, a conclusion that still holds true. Indeed, as the previous [N,CO,O]tgg ion population was calculated to be 52%, the corrected value of 33% agrees more favorably with the relative intensities observed in the experimental spectrum.

The Royal Society of Chemistry apologises for these errors and any consequent inconvenience to authors and readers.


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