Ivana Malvacioab,
E. Laura Moyanob and
D. Mariano A. Vera*a
aQUIAMM-INBIOTEC – Department of Chemistry, School of Exact and Natural Sciences, National University of Mar del Plata, Mar del Plata, Buenos Aires, Argentina. E-mail: dmavera@yahoo.com
bINFIQC – Department of Organic Chemistry, School of Chemical Sciences, National University of Córdoba, Córdoba, Argentina
First published on 31st August 2016
A set of 3-carboethoxy-quinolin-4-ones has been synthesized from diethyl 2-((arylamino)methylene) malonates through a Gould–Jacobs (G–J) cyclization using the flash vacuum pyrolysis (FVP) method. Mechanistic studies including calculations at first principles DFT and Coupled Cluster (CCSD(T)) levels of theory, along with insightful experiments, have been gathered to shed light on the complex multi-step process to afford quinolones. The G–J cyclization proceeded through a unimolecular process involving reactive species as iminoketenes, an azetinone and a quinolin-4(4aH)-one intermediates. The reaction was rate limited by a proton shift step in the pathway which leads to the final tautomeric product. In the gas phase pyrolysis of the starting malonates, along with the expected 3-carboethoxy-quinolin-4-ones, 3-unsubstituted-quinolin-4-ones were obtained, and the ratio between these products was strongly dependent on the nature of the arylamino group. In order to explain the deethoxycarbonylation reaction, DFT and ab initio calculations were also accomplished.
Due to the large diversity of applications, different strategies have been used to synthesize the quinolone nucleus: from anthranilic acid derivatives and ketones, from ring closure of β-anilinoacrylates (Conrad–Limpach reaction) or from anilines and an ethoxymethylenemalonic ester.6 The last one involves a condensation (Claisen condensation7) followed by an intramolecular cyclization (Camps cyclization8) known under the name of Gould–Jacobs (G–J) reaction from 1939.9 Since its first application, this reaction started to be one of the most commonly used methodologies to obtain different quinolones10 and quinolone-fused compounds as selenadiazoloquinolones,11,12 pyrimidopyrrolopyrimidines,13 pyridoquinoxalines,14 etc.
Although the G–J reaction has been widely used as a successful synthetic approach in solution15 and also under solvent-free conditions,16 this complex multi-step reaction has never been studied in detail in the gas phase. There are only a few reports of application of this reaction under flow systems17,18 and similar cyclization under flash vacuum systems.19 Therefore, considering that the full G–J reaction mechanism including all the possible transition states (TS) and intermediates it is still not well known, we decided to carry out a typical G–J cyclization under flash vacuum pyrolysis (FVP) conditions. This type of gas-phase thermal reactions has proven to be an interesting methodology to study reaction mechanisms and also for synthetic purposes.20–22 FVP consists in submitting a molecule to the application of high temperature (200–900 °C) during a short period of time (∼10−2 s) under high vacuum (∼10−2 to 10−1 Torr). This kind of solvent-less process allows the examination of reactive species such as carbenes, nitrenes, and radicals among others. Thus, FVP is an excellent technique for the study of intramolecular reactions such as eliminations and cyclizations with the resultant generation of products that cannot be prepared in conventional solution thermolysis. Moreover, from the mechanistic point of view, FVP reactions can easily be modeled since the inherent limitations of the theoretical solvent models are absent. Besides, performing the reaction in gas phase and vacuum, the focus can be placed on unimolecular processes over bimolecular ones or discrete interaction with solvent molecules.
Here we applied the FVP methodology as a novel approach to prepare 3-carboethoxy-6-substituted-quinolin-4-ones (4a–f, Scheme 1) from diethyl 2-((arylamino)methylene)malonates (3a–f). This transformation involved the G–J cyclization of malonates in gas phase, which has never been described before. An exhaustive computational mechanistic study of the whole reaction, starting from aniline (1) and diethyl-ethoxymethylenmalonate (2), was performed using DFT and ab initio (Coupled-Cluster) methods. The proposed steps were confirmed by locating the different intermediates and TS which lead to the final product. In addition, theoretical calculations were essential to explain the observed trend in the gas phase synthesis of 4 along with the formation of 6-substituted-quinolin-4-one (6) as a competitive product from a deethoxycarbonylation reaction.
As a first attempt, malonate 3c was selected to optimize FVP conditions. Thus, pyrolysis were carried out at 250–500 °C (increasing 50 °C in each reaction) and ∼1 × 10−2 Torr, during 1 hour. From 300 °C, conversion of substrate was quantitative and quinolones 4c and 6c were obtained as main products. Above 330 °C the formation of other products (like 5, Scheme 1) was increased and the reaction mixture became complex. Taking into account these preliminary results, the temperature of 330 °C was chosen as the optimal value to perform the thermal study of remaining malonates (3a–b, d–f).
After performing FVP reactions, the treatment of the solid products with acetone gave rise to two different fractions: an insoluble fraction (IF) and a soluble one (SF). By using 1H NMR it was determined that the IF was enriched with both quinolone derivatives (4 and 6), whereas the SF was enriched with 6, containing also the un-reacted substrate (3) and other minor products (Table 1).
Substrate | R | Product composition | ||||||
---|---|---|---|---|---|---|---|---|
IFa (%) | SFa (%) | IF![]() ![]() |
||||||
4 | 6 | 3 | 4 | 6 | Other | |||
a IF: insoluble fraction (composed by 4 and 6), SF: soluble fraction (composed by 3, 4, 6 and others).b Molar ratio calculated from the analysis of 1H NMR spectrum. | ||||||||
3a | H | 93 | 7 | 23 | — | 42 | 35 | 63![]() ![]() |
3b | OCH3 | 95 | 5 | 12 | 46 | 25 | 17 | 60![]() ![]() |
3c | Cl | 78 | 22 | 1 | 47 | 51 | — | 60![]() ![]() |
3d | Br | 87 | 13 | 2 | — | 65 | 33 | 51![]() ![]() |
3e | I | 86 | 14 | 22 | — | 67 | 11 | 56![]() ![]() |
3f | NO2 | 23 | 77 | 8 | — | 78 | 14 | 35![]() ![]() |
Regarding the results shown in Table 1, it is clear that the gas phase formation of quinolones 4a–f was less efficient that its microwave-assisted synthesis in solution (diphenyl ether, 240 °C, 3 min) from the same starting malonates.15 For the latter methodology, the yields of quinolone 4 ranged between 64–91%, whereas the yields obtained by FVP were only 5–44%. One of the reasons of the depleted generation of 4 can be attributed to the formation of the deethoxycarbonylated 6, which was largely obtained in the pyrolysis of halogenated and nitro-malonates (3c–f). It is worthy to mention that compounds 6 were not produced in thermal reactions of 3 in solution (conventional or microwave-assisted procedures), which would indicate that FVP conditions favor the deethoxicarbonylation process at relatively low temperatures. A possible pathway for the formation of 6 could be via the anilinoacrylate 5, which was detected in some FVP reactions depending on experimental conditions (Scheme 1). Indeed, the formation of similar intermediates was previously reported in the gas-phase decarboxylation of N-arylaminomethylene Meldrum's acid derivatives to give quinolones. Nevertheless, in these investigations high pyrolysis temperatures (around 600 °C) were required to afford the decarboxylation reaction.23,24
A productive complex I between substrates 1 and 2 was stabilized by a strong hydrogen bond between the nitrogen center of the aniline and one of the carbonyl oxygen of malonate. Then, a nucleophilic attack of the aniline to the vinylic carbon of malonate gave an enol intermediate II, through a transition state (TS-I) with a barrier of 23.5 kcal mol−1. Next up, II easily cleaves with the elimination of an ethanol molecule, passing through a TS similar to the previous one (TS-II, 24.2 kcal mol−1) affording product 3 (Fig. 1a). For all substrates, the profiles for this step were found to have very similar free energies (ΔΔG ∼ 2 kcal mol−1, Fig. 1b).
By comparing the three different substituents, the lowest TS-II energy was obtained for reaction of 1b, where methoxy group in the aniline ring seems to favor the attack of this amine to the vinylic carbon of 2 (further details about total energies in atomic units for all the steps and additional figures and computational details are reported in the ESI,† part II).
The second step of the mechanism involves the cyclization of 3 to give 4 (Scheme 3). Thus, once the product 3 was formed, it can interconvert in different conformers from which either an ethanol or an ethene molecule could be eliminated, thus leading to two possible pathways: formation of quinolin-4-one 4, hereafter referred as path A (Scheme 3), or the formation of deethoxycarbonylated-quinolin-4-one 6, labeled path B (Scheme 4).
According to our calculations and previous crystallographic data,25 the most stable conformer of 3 is the one which establishes a hydrogen bond between the nitrogen of aniline and the carbonyl of the ester group. However, at the beginning of path A we observed the interconversion to the conformer A-IV, which establishes a hydrogen bond between the nitrogen of aniline and the oxygen of one ethoxy instead of carbonyl group (Scheme 3). Such conformation allows the initial ethanol detachment, which was found to be endergonic and concerted with the proton transfer from the aniline; thus yielding a loose complex between the iminoketene intermediate A-V and the ethanol (hereafter and for the sake of brevity, most of the calculated loose complexes will be generally omitted from the discussion). All reasonable fates of this ketene were studied by considering isomerizations and different ring closures (not shown) nevertheless, only the two lowest energy paths will be discussed.
In these paths, A-V could either cyclize to azetinone A-VI′ or interconvert by the indicated bond rotation (TS-A-V) to its isomeric ketene A-VI, which finally leads to the six-membered ring closure (Scheme 3). At the same time, the azetinone A-VI′ could also reach A-VI through a ring opening-closure TS (TS-A-V′) which was 2.6 kcal mol−1 lower than TS-A-V, indicating that both pathways are possible in practice. The free energy profile at CAM-B3LYP/6-311+G(d,p) level of theory is shown in Fig. 2 for 3d. Moreover, the free energies obtained for all species in Scheme 3 are summarized on Table 2 for the three different substituents.
![]() | ||
Fig. 2 Free energy profile for the reaction path A for 3d at the CAM-B3LYP/6-311+G(d,p) level of theory. |
Path A | CAM-B3LYP | CCSD(T) | ||||
---|---|---|---|---|---|---|
R = | R = | |||||
OMe | Br | NO2 | OMe | Br | NO2 | |
a ΔG0 relative to reactants 3b, 3d, and 3f respectively; all energies are expressed in kcal mol−1. | ||||||
3b, d or f | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
A-IV | 4.81 | 5.44 | 5.43 | |||
TS-A-IV | 35.78 | 35.83 | 35.74 | 29.03 | ||
A-V complex | 31.51 | 32.00 | 31.68 | |||
A-V | 25.86 | 25.88 | 25.72 | 22.99 | 22.65 | 22.56 |
TS-A-V | 47.74 | 46.12 | 43.47 | 48.50 | 46.72 | 44.97 |
A-VI | 29.90 | 30.38 | 29.57 | 24.80 | 24.75 | 24.71 |
TS-A-VI | 47.98 | 50.70 | 52.32 | 43.28 | 45.75 | 47.07 |
A-VII | 36.23 | 39.72 | 41.92 | 30.04 | 32.91 | 34.43 |
TS-A-VII | 60.25 | 65.49 | 70.12 | 59.43 | 62.84 | 67.17 |
A-VIII | 41.66 | 53.46 | 61.56 | 42.26 | 52.24 | 57.54 |
TS-A-VIII | 51.98 | 62.21 | 68.29 | 50.94 | 60.38 | 64.75 |
4 (enol) | −9.61 | −9.61 | −8.94 | −10.07 | −10.60 | −10.24 |
4 (oxo) | −1.75 | −1.40 | 5.75 | −1.56 | −1.84 | −1.37 |
TS-A-V′ | 43.31 | 43.49 | 42.75 | 40.58 | 41.96 | 41.33 |
A-VI′ | 40.81 | 41.01 | 40.69 | 38.68 | 38.11 | 38.17 |
TS-A-VII′ | 61.76 | 70.33 | 76.38 | 71.18 | ||
A-VIII′ | 59.75 | 70.05 | 76.92 | 70.23 | ||
TS-A-VIII′ | 68.92 | 75.21 | 79.21 | 73.29 | ||
TS-A-VII′ (direct) | 81.68 | 78.32 |
The analysis of the electrostatic potential (Fig. 3) evidenced that the ketene carbon of A-V was a strong electrophile; this fact could justify the two possibilities of reaction of A-V: (i) cyclization to azetinone A-VI′ and (ii) direct isomerization to A-VI, which in the next step could be suitable for the attack to the phenyl ring leading to the quinolin-4(4aH)-one intermediates intermediate A-VII.
At this point, it is worth to mention that path A was also calculated for all derivatives at the Coupled Clusters level of theory to improve the quality of calculations; the superimposed profiles for the three substituents are shown (starting from A-V) on Fig. 4. For the three derivatives the agreement between the functional and the higher level energy improvement at CCSD(T) were very good; the comparison of energy profiles at CAM-B3LYP and CCSD(T) level of theory is depicted in Fig. S3 on the ESI.† The calculations revealed that all derivatives display similar reaction coordinates. The main differences between them were: (i) the activation barrier associated with TS-A-V was higher for methoxy derivative 3b than for the bromo and nitro derivatives, (ii) the electrophilic attack of the ketene carbon to the phenyl ring leading to the six-membered ring closure to form A-VII was found easier for 3b than for the bromo and nitro derivatives with higher TS-A-VI barriers and (iii) in all cases the activation barriers for proton shifts in the quinolone ring via TS-A-VII and TS-A-VIII (see also Scheme 3) were higher than any previous isomerization and/or ring closure steps, it being clearly higher in the case of the nitro (3f) than for bromo- and methoxy-derivatives. In the following step, the ketene A-VI afforded the benzo-annulation reaction to produce A-VII (Scheme 3). In this transformation the electronic effect of aryl substituents was clearly observed. Thus, the higher electron density on the phenyl ring for R = OCH3 (Fig. 3a) would favor the electrophilic attack of the ketene A-VI giving the cyclization to form the intermediate A-VII. Therefore, the order of reactivity for A-VI to A-VII according to the substituents on the phenyl ring was: R = OCH3 > Br > NO2 (see the comparison of the three energy profiles, from A-VII to the final products on Fig. 4).
![]() | ||
Fig. 4 Free energy profiles for the path A, detailed after the iminoketene A-V formation from 3b, d, f at CCSD(T) level of theory. |
It is interesting to note that the cyclization step would be rate controlling under solvent conditions since once A-VII is formed; it would readily tautomerize to either its oxo or enol aromatic forms (i.e. the final products) through bimolecular processes. However, under extremely low pressure as it was done in FVP reactions, the only path for tautomerization of A-VII was actually the intramolecular proton shift.
According to the mechanism here proposed, the gas phase tautomerization of A-VII to enol 4 could be produced through two consecutive H-shifts: [1,2]H-migration to give TS-A-VII and then [1,4]H-migration to form TS-A-VIII. The 3D-structures for this sequence of intermediates and TS are summarized on Fig. 5 for the case of 3d (R = Br). Alternatively, the transformation of A-VII to oxo tautomer 4 could occur through two consecutive [1,2]H-migrations, through TS-A-VII′ and TS-A-VIII′; however, this possibility was the pathway with higher energy (Fig. 2).
![]() | ||
Fig. 5 Structures of the stationary points found for the lowest free energy pathway for the sequence A-VII to 4d (the TS for the OH rotation to form an H-bond is omitted). |
The direct [1,3]H-migration from C4a to the carbonyl oxygen was also considered. In this case we were not be able to locate the transition-state structures involved in this process for quinolines coming from 3a and 3d; however for derivative 3f a four-membered TS was found (TS-A-VII′′). The calculations indicated that this TS was significantly higher in energy (11.6 kcal mol−1 higher than TS-A-VII). From the calculations, the H-shifts in TS-A-VII and TS-A-VIII were influenced by the substituents in the quinolone ring. Thus, the TS structure TS-A-VII for quinoline 3b was predicted to be 9.9 kcal mol−1 lower in energy than TS-A-VII for 3f.
Also for the sigmatropic shift via TS-A-VIII, the TS associated with 3b was lower in energy than for the other quinolines (10.2 and 16.3 kcal mol−1 lower than for 3d and 3f, respectively). Therefore the activation barriers for these transitions were in the following order of substituents: OCH3 < Br < NO2 (Fig. 4).
By analyzing the electrostatic potentials of intermediate A-VII it could be demonstrated that the hydrogen involved in this TS has a positive charge density (Fig. 6). Thus, considering this proton has to migrate to C5, in α-position to the substituents R, it became clear that the electron rich substituents favored this transposition while it was disadvantaged by electron withdrawing substituents. This effect may also be the reason why direct [1,3]H-shift from the C4a to the carbonyl oxygen to form enol 4, was only observed for the nitro derivative. This pathway is not further discussed here since it was the way with the highest activation energy, probably due to the fact that [1,3]H-shifts are thermally prohibited26 (see the energy profile for nitro derivative in Fig. S4 of ESI†). According to Fig. 2 and 4, TS-A-VII could be thought as the rate-determining TS under FVP conditions, since it is the highest TS in energy. However, as it was previously reported by Kozuch et al., here it might be thought that the reaction was controlled by a rate-determining zone, which could be defined by two consecutive steps, from intermediate A-VII to the final product 4. This rate-determining region would include the highest transition states TS-A-VII and TS-A-VIII, the last one being an irreversible step and both of them strongly affected by the electronic nature of the ring substituents.27
![]() | ||
Fig. 6 Structure and electrostatic potential of the intermediate A-VII: (a) A-VIIb come from 3b (R = OMe), (b) A-VIId come from 3d (R = Br) and (c) A-VIIf come from 3f (R = NO2). |
It is important to mention that intermediates like A-VI and A-VII have been reported particularly in the pyrolysis of Meldrum's acid derivatives.18,23 These processes were previously proposed to have high activation barriers in similar reactions steps. However, to the best of our knowledge, no-one could describe and characterize the process in detail and the intramolecular proton transfer described above has never been studied in depth. Indeed, the researchers that have performed theoretical calculations of this reaction involving 6π electrocyclization to afford quinolone nuclei, through intermediates like A-VII, could not find the TS corresponding to the H-shift described for the tautomerization step.17,28 This fact, was another motivation to study the mechanism at a higher level of theory (CCSD(T)) in order to confirm the energetics of the proposed steps. Once studied the path A, the possible reaction mechanism leading to the formation of 6 was also studied, this mechanistic way is named path B and is represented in Scheme 4 (the relative free energies are summarized on ESI Table S1,† similar to Table 2 for the main path A).
Due to the high temperatures raised in the FVP reactions, it would be possible to achieve a higher TS than for the release of ethanol (described in the path A), corresponding to the elimination of ethene (TS-B-II or TS-B-III′, Fig. 7 and Scheme 4).
![]() | ||
Fig. 7 Comparison between the free energy profiles along the path B (colors according to Scheme 4) and the path A (dark blue) for 3d. |
Once the ethene molecule was released, the intermediate formed (B-III) could either lose ethanol followed by CO2 elimination in two consecutive steps (TS-B-VI′′ and B-VI′′, green curve in Fig. 7) or in a concerted way (TS-B-VI′, red curve in Fig. 7). Another possibility could be the CO2 release from B-IV to achieve the cumulene B-V followed by formation of 5 (experimentally detected), which can eliminate ethanol to give the iminoketene intermediate (TS-B-VI, cyan curve Fig. 7). The fact that 5 was detected in the FVP experiments, and also this compound was the thermodynamically most stable intermediate (−5.3 kcal mol−1, Fig. 7), let us to the study of path B considering the loss of carboethoxy group from malonate 3, instead of thinking about deethoxycarbonylation of quinolone 4. In addition, it is known that elimination of carboxy groups in gas phase requires very high temperatures (600–800 °C) in most of the organic compounds.20
The TS which gave rise to 5 was the most energetic (TS-B-V) along this pathway, and it was also higher than TS-A-VII (Fig. 2 and Scheme 3), probably because the [1,3]H-shift required in the cumulene intermediate (Scheme 4). Therefore, and due to the irreversibility of this step, the formation of 5 could be candidate for the rate-determining state for path B. Henceforth, in the formation of quinolone 6, the mechanism continued in an analogous way that the calculated for path A, i.e. through a ketene intermediate (B-VI), ring closure and successive H-shifts (Scheme 4 and Fig. 7).
Besides the high energy of the TS-B-V, and even if it were avoided by following an alternative path, the first ethene elimination had also a very high energy. These TSs were similar and lied between 62 and 66 kcal mol−1 (Fig. 7 and Table 2), with little difference between the three substituents. In contrast, the controlling steps on path A, i.e. the proton-shift tautomerization steps are more sensitive to the substituent (Fig. 4). In the case of the most reactive R = OMe, the tautomerization step TS-A-VII which controlled path A was at 60.2 kcal mol−1; this explains the abundance of 4b as clear main product in the case of 3b. On the opposite edge, for the case of R = NO2, the corresponding tautomerization TS was 70.1 kcal mol−1, this allowing path B to be competitive. Again in good agreement with the experiments, the nitro derivative was the poorest in its 4:
6 ratio (actually, 6 was more abundant than the desired product 4 in this case).
As well as the product distribution 4:
6 ratio, the above comparison between the TS on each path can explain the unique reactivity observed in FVP conditions. The ratio of both quinolones was determined by the height of the tautomerization TSs on path A (TS-A-VII) which are comparable to several TSs above 50 kcal mol−1 on path B. However, the critical ethene detachment on path B (with more than 60 kcal mol−1 TS) will occur for each substituent either in gas phase or a solvent media. But the tautomerizations (above 50 kcal mol−1) on path A would not present an important barrier if the reaction had been made in solvent media. Under such condition, the highest TS in path A would be far below any TS in the path B and consequently this path could not have been competitive.
In order to understand the observed trend, first principles calculations were performed to study the complete reaction mechanism in-depth. Once 3 was formed, the reaction proceeded in one or another fate depending on whether only one ethanol molecule was released, or ethene and carbon dioxide followed by ethanol were lost, giving 4 and 6 respectively. In both cases an iminoketene (A-V or B-VI) was found as a key intermediate. When such ketene was attacked by the phenyl ring, a quinolone-like intermediate was formed (A-VII or B-VIII), which tautomerized to the final product through two consecutive H-shifts. Surprisingly, the most energetic TS along the reaction were found to be these hydrogen migrations, which could be the rate-determining zone in the gas phase process. For the first time, in the present study, it was possible to characterize all TS of the process calculating their energies with a high accuracy CC method. The effect of the substituents on the starting aniline were also analyzed and discriminated according to the role they played in each step of the whole mechanism.
Pyrolysis of malonate 3 proceeded through two competitive reactions that led to the formation of quinolones 6 and 4. The aniline acrylate 5 was found to be a key intermediate to understand the deethoxycarbonylation process from 3, which occurred before the ring closure towards quinolone formation.
Footnote |
† Electronic supplementary information (ESI) available: The information is organized in three parts: part I: substance characterization data; part II: thermochemistry details, additional table and figures, and part III: xyz coordinates of main stationary points discussed. See DOI: 10.1039/c6ra11986g |
This journal is © The Royal Society of Chemistry 2016 |