Duntao Shu‡
ab,
Yanling He*c,
Hong Yue‡d,
Junling Gaoe,
Qingyi Wange and
Shucheng Yangf
aState Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
bCenter for Mitochondrial Biology and Medicine, The Key Laboratory of Biomedical Information Engineering of the Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University, Shaanxi 710049, China
cSchool of Human Settlements & Civil Engineering, Xi'an Jiaotong University, Shaanxi 710049, China. E-mail: heyl@mail.xjtu.edu.cn; Fax: +86 029 83395128; Tel: +86 029 83395128
dState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy and Yangling Branch of China Wheat Improvement Center, Northwest A&F University, Yangling, Shaanxi 712100, China
eSchool of Chemical Engineering & Technology, Xi'an Jiaotong University, Shaanxi 710049, China
fSchool of Energy and Power Engineering, Xi'an Jiaotong University, Shaanxi 710049, China
First published on 9th September 2016
The anaerobic ammonium oxidation (anammox) process has mainly been applied to NH4+–N-rich wastewater with very low levels of organic carbon (<0.5 g COD per g N). Some anammox bacteria species have the capacity to oxidize organic carbon with nitrate as the electron acceptor. However, little is known about the organotrophic anammox nature of “Ca. Brocadia sinica”. To elucidate the metabolic versatility and microbial succession of “Ca. Brocadia sinica” under TOC/TN stress conditions, the influence of TOC/TN ratios on the nitrogen transformation pathway and the dynamics of microbial communities were investigated. It was found that an appropriate TOC/TN ratio (<0.2) could promote the anammox activity over the short-term. Meanwhile, “Ca. Brocadia sinica” had higher tolerance to higher TOC/TN (>0.4) abiotic stresses. Mass balance indicated that organotrophic anammox could outcompete denitrifiers under a TOC/TN ratio of 0.1–0.2. Quantitative response relationships and pathway analysis revealed that (AOA amoA + AOB amoA + anammox + nrfA)/bacteria, nrfA/(narG + napA), and nrfA were the key functional gene groups determining the organotrophic anammox contribution. Additionally, MiSeq sequencing showed that Planctomycetes, Proteobacteria, Chloroflexi, and Chlorobi were the most abundant phyla in the organotrophic anammox system. Furthermore, higher TOC/TN ratios (>0.40) could result in the community succession of anammox species, in which “Ca. Jettenia caeni” and “Ca. Kuenenia stuttgartiensis” were the dominant organotrophic anammox bacteria species. Overall, combined analyses revealed that the coupling of anammox, DNRA (organotrophic anammox), and denitrification comprised the primary pathway that accounted for TOC and nitrogen removal.
Nevertheless, the slow growth rate, low cell yield, and sensitivity to environmental conditions which characterize anammox bacteria have presented major obstacles to the broader application of anammox-related processes. For instance, in a mainstream and side-stream nitrogen removal process, anammox bacteria were unable to avoid the influences of volatile fatty acids (VFA) (expressed as total organic carbon), which existed in large volume in municipal and industrial WWTPs.6 Although the addition of organic matter had significant effects on anammox bacteria in many studies, there has been no consensus on which TOC (total organic carbon) to TN (total nitrogen) ratios inhibit/or affect the anammox bacteria.7–9 In addition, investigations have reported that the most critical point in the competition between autotrophic anammox, organotrophic anammox, and heterotrophic denitrification for TOC is the C:
N ratio in the influent.10,11 Moreover, detailed evidence describing the contribution of organotrophic or mixotrophic anammox processes to nitrogen removal in the presence of TOC has yet to be presented.
To date, six anammox bacteria genera have been detected and proposed using 16S and 23S rRNA gene sequencing: “Ca. Brocadia sinca”, “Ca. Anammoxoglobus propionicus”, “Ca. Jettenia caeni”, “Ca. Kuenenia stuttgartiensis”, “Ca. Scalindua sp.”, and “Ca. Brocadia anammoxidans”.12,13 A few recent studies10,14,15 have reported that some anammox bacteria species, including Ca. Jettenia asiatica, Ca. Ananimoxoglobus propionicus, Ca. Brocadia fulgida, and Ca. Kuenenia stuttgartiensis have the capacity to oxidize acetate and propionate. In addition, phylogenetic classification of anammox 16S rRNA12 revealed that “Ca. Brocadia sinica” was closely related to the group “Ca. Brocadia Scalindua sp.” and “Ca. Brocaida anammoxidans”, which were organotrophic. Thus, it could be speculated that TOC might have been utilized as electron donors by “Ca. Brocadia sinica” and this phylum could success to other organotrophic anammox species. However, whether the organotrophic nature of “Ca. Brocadia sinica” participated in TOC oxidation remains unverified. This inspired us to explore the adaptability and organotrophic nature of “Ca. Brocadia sinica” in the presence of TOC.
In addition, anammox sludge in wastewater treatment plants is a highly complex system of eukaryotes (protozoa, fungi, and microalgae),16–19 bacteria, archaea, and viruses, in which bacteria are dominant. Molecular biological methods which have been applied to explore the microbial structures in anammox-related system include clone library of 16S rRNA genes, denaturing gradient gel electrophoreses (DGGE) analysis and fluorescence in situ hybridization (FISH). With the recent rapid development of the next-generation sequencing, high-throughput sequencing has been received more attention. 454 pyrosequencing20 and Illumina high-throughput sequencing21 have been applied to the investigation of microbial communities in lab-scale and pilot-scale anammox-related systems. However, little is known about the dynamics of microbial communities and functional genes under TOC/TN constraints. Knowledge of microbial community structures and the links to different TOC stresses is therefore essential for understanding the profile of the organotrophic anammox process.
Furthermore, nitrification, denitrification, and anammox could co-exist in anammox-related systems when the TOC was present.22 These nitrogen removal processes involve several functional genes which have played key roles in microbial nitrogen cycling, including anammox 16S rRNA, archaea ammonia monoooxygenase (AOA-amoA), ammonia monoooxygenase (AOB-amoA), nitrite oxidoreductase (nxrA), periplasmic nitrate reductase (napA), membrane-bound nitrate reductase (narG), dissimilatory nitrate reductase (nrfA), copper-containing nitrite reductase (nirK), nitrite reductase (nirS), and nitrous oxide reductase (nosZ).23,24 Nevertheless, the quantitative response relationship between nitrogen transformation rates and functional genes are unknown in the anammox system. Furthermore, the corresponding dynamics of microbial community structures and functional gene groups on the quantitative molecular level in the organotrophic anammox process are still unclear.
The present study is the first to systematically investigate the microbial community structure dynamics and quantitative molecular mechanisms of nitrogen transformation in anammox systems under different TOC stress constraints. Based on these arguments, this study was performed for the following purposes: (1) to assess the impacts of different TOC/TN ratios on organotrophic anammox growth rates and activity using batch experiments; (2) to evaluate the long-term adaptation of “Ca. Brocadia sinica” and contribution of organotrophic anammox bacteria species under different TOC/TN constraints; (3) to explore the quantitative response relationships between nitrogen transformation rates and functional gene groups, and (4) to investigate the dynamics of nitrogen-related microbial communities under TOC/TN stress conditions.
NH4+–N (mg L−1) | NO2−–N (mg L−1) | TOC (mg L−1) | TOC![]() ![]() |
|
---|---|---|---|---|
Batch experiments | ||||
Batch test 1 | 80 | 96 | — | — |
Batch test 2 | 80 | 96 | 8.99 | 0.05 |
Batch test 3 | 80 | 96 | 17.98 | 0.10 |
Batch test 4 | 80 | 96 | 35.96 | 0.20 |
Batch test 5 | 80 | 96 | 71.91 | 0.41 |
Batch test 6 | 80 | 96 | 107.87 | 0.61 |
Batch test 7 | 80 | 96 | 143.82 | 0.82 |
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Long-term experiments | ||||
Phase I (1–62 days) | 190 | 220 | — | — |
Phase II (63–79 days) | 190 | 220 | 41.20 | 0.10 |
Phase III (80–95 days) | 190 | 220 | 82.40 | 0.20 |
Phase IV (96–106 days) | 190 | 220 | 164.79 | 0.40 |
Phase V (107–120 days) | 190 | 220 | 329.59 | 0.80 |
Recovery (121–140 days) | 70 | 84 | — | — |
To investigate the effects of different TOC/TN ratios on “Ca. Brocadia sinica”, the specific anammox activity (SAA) and specific anammox growth rates (μAN) were measured according to the following models.25
![]() | (1) |
For long-term experiments, ∼900 mL of seeding sludge were derived from the initial SBR system and then cultivated in a new SBR system with a working volume of 2.6 L. The new SBR system was operated under the same mesophilic conditions with mineral medium and trace element solution.1 The new anammox–SBR system was run in a 12 hour-cycle and fed with 190 mg L−1 NH4+–N and 220 mg L−1 NO2−–N. Because the anammox bacteria tolerate to lower DO concentrations (<0.5 mg L−1) well and the dissolved oxygen (DO) in anammox–SBR system was consumed by some of the aerobic bacteria, the dissolved oxygen (DO) was not controlled in the anammox–SBR system. More specifically, the dissolved oxygen (DO) was not controlled in any of the phases, and it measured 1.0–1.3 mg L−1 in the influent and 0.08–0.3 mg L−1 in the effluent. After the adaptation stage, the experimental batches with different ratios of TOC/TN had values of 7.2 mL, 14.4 mL, 28.8 mL, and 57.6 mL (7.24 g TOC per L) mixed solution of sodium acetate and propionate. These were added into the reactor automatically at the end of each feeding period to maintain influent TOC/TN ratios of 0.10, 0.20, 0.40, and 0.80 (Table 1).
Before sequencing, genomic DNA was amplified by PCR using primer sets 338F (5′-barcode-ACTCCTACGGGAGGCAGCAG-3′) and 806R (5′-barcode-GGACTACHVGGGTWTCTAAT-3′) for the V3–V4 regions of the bacterial 16S rRNA. The amplification reactions were performed in triplicate using the previously described primers and protocols.26 After amplification, the PCR products were purified with the AxyPrep DNA Gel Extraction Kit (Axgen, USA) and quantified with a QuantiFluor™-ST (Promega, USA) according to the instructions. Then the three individual PCR products were pooled in equimolar ratios and amplicon libraries were constructed before sequencing. Finally, the amplicon libraries were prepared and then run on the MiSeq Illumina platform (Shanghai Personal Biotechnology Co., Ltd, Shanghai, China). All the raw sequences have been deposited into the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (Accession number: SRR2962328).
To generate the standard curve, plasmid DNAs were diluted to yield a series of concentrations, each with a 10-fold difference. The efficiencies of the qPCR assays ranged from 102% to 110%, and the R2 value for each standard curve line exceeded 0.98. The Ct value (threshold cycle) was determined to quantify the copy number of all of the above mentioned genes. The qPCR amplification was conducted in 10 μL reaction mixtures, consisting of 5 μL SYBR® Premix Ex Taq™ II (Takara, Japan), 0.25 μL of each primer, 1 μL of genomic DNA and 3.5 μL dd H2O. The primers and qPCR protocols followed Shu et al.21 Each qPCR reaction was run in triplicate.
The ecological association between rates of nitrogen transformation and functional gene groups were evaluated via stepwise regression analyses (SPSS 20, USA). Furthermore, the direct and indirect contribution of different functional gene groups on nitrogen transformation rates were determined using path analysis according to the methods described by Pang et al.32 Values of direct effects (path coefficients)33 were derived by the simultaneous solution of the normal equations for multiple linear regression using SPSS Statistics 20 (IBM, USA). Indirect effects were obtained from simple correlation coefficients between functional genes using SPSS Statistics 20 (IBM, USA) (http://www-01.ibm.com/software/analytics/spss/).32
Additionally, the dependence of SAA and μAN on the different TOC/TN stresses were well described by the substrate inhibition kinetics model. The results from Fig. 1g–h showed that 0.0524 kg N per kg VSS per d and 0.1356 d−1 were the maximum SAA (SAAmax) and μAN max, respectively. The inhibition constants of nitrite and TOC were 4.8651 mmol L−1 (122 mg N per L) and 2.4762 mmol L−1 (196 mg L−1 TOC), respectively. Meanwhile, the 95% confidence interval showed in Fig. 1g and h further indicate that the specific anammox growth rate under TOC/TN abiotic stresses could be described by eqn (1).
Kartal et al. found “Ca. Kuenenia stuttgartiensis” have the unique ability to use TOC as electron donors to reduce the nitrate and nitrite to ammonium.34 Winkler et al. also found that both “Ca. Brocadia fulgida” and “Ca. Anammoxoglobus propionicus” were capable of oxidizing VFAs.10 Moreover, it was found that the appropriate influent C/N ratio for this process is 0.5 g COD per g NH4+–N. Huang et al. found that “Ca. Jettenia asiatica” have an organotrophic anammox nature and that they could obtain high rates of NH4+–N conversion at low COD:
N ratios (<1.5).14 In addition, Du et al. found that anammox bacteria could outcompete heterotrophic denitrifiers. In this study, “Ca. Brocadia sinica” have higher rates of specific anammox growth and activity at TOC/TN ratios ranging from 0.05 to 0.61. There are two possible explanations for this result. One is that “Ca. Brocadia sinica” oxidized the TOC to CO2 with nitrate and/or nitrite as the electron acceptor; the other is that the surplus TOC were consumed by heterotrophic microorganisms. These two possible explanations demanded exploration and either rejection or confirmation based on detailed evidence from long-term treatment performance and mass balance.
In general, the results from the long-term treatment performance of assessment of the organotrophic anammox system under different TOC/TN ratio conditions indicated that the autotrophic anammox process was the primary process accounting for nitrogen removal in phases I–III, which was consistent with the results from the short-term experiment in this study as well as the work of Tang et al.9 In addition, due to the weakening of the anammox process in phase IV, the decreased production of NO3−–N indicated that organotrophic anammox and heterotrophic denitrifiers could coexist for purposes of nitrogen removal. There are two reasons which may explain these results: (1) organotrophic anammox bacteria could consume the acetate and propionate to reduce the nitrate and nitrite to ammonia;11,34 (2) heterotrophic denitrification and denitritation could contribute to the TN removal.
The severely inhibited anammox in phase V along with increased NH4+–N concentration and further decreased NO3−–N effluent production indicate that autotrophic anammox could not outcompete heterotrophic microorganisms under high TOC/TN ratios. Moreover, it was found that lower ratios of TOC/TN (<0.2) were useful for simultaneous removal of nitrogen and TOC but anammox growth rates were suppressed by higher TOC/TN ratios (>0.40).
Based on the above results, it could be seen that the average NO3−–N production was 35.37 ± 6.18 mg L−1 without the addition of acetate and propionate in phase I, which was very close to the theoretical production. However, during phases II–V, the average nitrate production was far less than that in phase I. For instance, the average nitrate production was 20.32 mg L−1 in phase II. Ahn et al.36 have reported that 1 g nitrate would be reduced when 3.31 g chemical oxygen demand (COD) was consumed. Thus, 15.05 mg (35.37 − 20.32 = 15.05) nitrate would be reduced in another pathway when 49.82 mg COD (15.05 × 3.31 = 49.82) was consumed. In phase II, the TOC/TN ratio was 0.19 (equal to 110 mg L−1 COD) and the TOC removal efficiency was 36.65 ± 4.56%, revealing that 40.32 mg L−1 was consumed in phase II. It is obvious that nitrate was in too short a supply to foster denitrification in phases III–V. It can be concluded that organotrophic anammox bacteria which consumed TOC and thus reduced the levels of nitrate existed in phases II–V.37
Some studies have reported a total of four possible nitrogen and TOC consumption processes: the autotrophic anammox process eqn (2); the organotrophic anammox process eqn (3); the denitritation process eqn (4); and the denitrification process eqn (5).5,12,38 To further understanding the nitrogen pathway in the organotrophic anammox process, the removal of NH4+–N, NO2−–N, NO3−–N, and TOC were calculated based on nitrogen, TOC mass balance and eqn (2)–(5).
Autotrophic anammox:
NH4+ + 1.32NO2− + 0.066HCO3− + 0.13H+ → 1.02N2 + 0.26NO3− + 0.066CH2O0.5N0.15 + 2.03H2O | (2) |
Organotrophic anammox:
NH4+ + NO3− + HCOO− + H+ → N2 + CO2 + 3H2O, (ΔG′o = −522.4 kJ mol−1) | (3) |
Denitritation:
NO2− + 0.19CH3CH3CH2COOH + H2CO3 → 0.037C5H7NO2 + 0.481N2 + 1.14H2O + HCO3− + CO2 | (4) |
Denitrification:
NO3− + 0.29CH3CH3CH2COOH + H2CO3 → 0.034C5H7NO2 + 0.483N2 + 1.54H2O + HCO3− + 0.986CO2 | (5) |
As shown in Table 2, during phases II–V of the organotrophic anammox, only a small contribution to the overall nitrogen removal was made. In general, as the TOC/TN ratio increased from 0.10 to 0.80, the average nitrogen removal pathway percentage observed in the autotrophic anammox process decreased from 76.03% (phase II) to 2.42% (phase V). Correspondingly, the heterotrophic denitritation contribution increased from 7.05% (phase II) to 80.81% (phase V). These results indicate that autotrophic anammox and organotrophic anammox could not outcompete heterotrophic denitrification at high TOC/TN ratios. This was because the growth rate of the heterotrophic denitrification process enjoys have much shorter doubling times (2–16 hours), which renders the overall growth rate higher than that of anammox bacteria (8–12 days).12
Consumption | Removal route | Phase II | Phase III | Phase IV | Phase V |
---|---|---|---|---|---|
NH4+–N removal (mg L−1) | Anammox (autotrophic) | 150.19 | 135.96 | 116.91 | 7.84 |
Anammox (organotrophic) | 22.87 | 30.04 | 15.53 | 11.46 | |
NO2−–N removal (mg L−1) | Anammox (autotrophic) | 198.25 | 179.47 | 154.32 | 10.35 |
Denitritation | 27.73 | 46.51 | 71.66 | 215.63 | |
NO3−–N removal (mg L−1) | Anammox (organotrophic) | 22.87 | 30.04 | 15.53 | 11.46 |
Denitrification | — | — | — | — | |
Biomass increased (mg N) | Anammox (autotrophic) | 9.91 | 8.97 | 7.72 | 0.52 |
Anammox (organotrophic) | 0.75 | 0.99 | 0.51 | 0.38 | |
Denitritation | 1.03 | 1.72 | 2.65 | 7.98 | |
Total biomass increased (mg N) | — | 11.69 | 11.69 | 10.88 | 8.87 |
Total nitrogen removal (mg L−1) | — | 378.72 | 400.27 | 367.5 | 256.95 |
Average percentage of nitrogen removal routes (%) | Anammox (autotrophic) | 76.03 | 69.06 | 67.48 | 2.42 |
Anammox (organotrophic) | 11.88 | 14.76 | 8.31 | 8.77 | |
Denitritation | 7.05 | 11.19 | 18.78 | 80.81 | |
Denitrification | — | — | — | — | |
Other pathways | 5.04 | 4.99 | 5.43 | 7.99 |
Although the TOC/TN ratios were further increased, the organotrophic anammox contribution rates of 11.88%, 14.76%, 8.31%, and 8.77%, respectively, did not vary significantly. Interestingly, the maximum organotrophic anammox contribution was achieved at the TOC/TN ratio of 0.20. These results indicated that the organotrophic anammox activity had been maximized in this TOC/TN ratio. Meanwhile, the organotrophic anammox could outcompete heterotrophic denitrification in phases II–III. The reason for these favorable results is that organotrophic anammox could utilize nitrate and nitrite as electron acceptors to oxidized acetate and propionate under these conditions. Other nitrogen pathways such as fermentation and sulfur-based autotrophic denitrification varied from 5.04% to 7.99%.7
The copy numbers of three nitrification groups, including AOA amoA, AOB amoA and nxrA genes, were summarized in Fig. 3b. With the increase in TOC/TN ratios from 0–0.40 during phases I–IV, the absolute abundance of AOB amoA and nxrA gradually increased from 1.66 × 106 to 1.18 × 107 copies per g wet sludge, 4.87 × 104 to 1.04 × 105 copies per g wet sludge, respectively. However, higher TOC/TN ratios in phase V had adverse effects on these two genes, suggesting that the activity of AOB and NOB (nitrite oxidizing bacteria) have tolerate to TOC/TN ratios of 0.1–0.4 well. In addition, the absolute abundance of AOA amoA increased from 1.11 × 102 to 1.21 × 102 copies per g wet sludge in phases III–V, suggesting that AOA had positive relationship with TOC. The results indicated that AOA might have an organotrophic nature, which was consistent with the work of Mußmann et al.39
As illustrated in Fig. 3c, the dissimilatory nitrogen reduction gene nrfA increased from 2.02 × 104 to 6.95 × 105 copies per g wet sludge during phases I–V as the TOC/TN ratios increased. Kartal et al. found that some anammox bacteria species could engage in “disguised denitrification” in the form of the reduction of nitrate and nitrite (termed DNRA).34 As depicted in Fig. 3f, the variation of nrfA/anammox and anammox/bacteria had a high degree of consistency, indicating that DNRA or organotrophic anammox had greatly contributed to nitrogen removal in the organotrophic anammox process. In addition, Fig. 3c indicated that the absolute gene abundance of napA increased in phases I–IV, while it decreased in phase V. As compared to the napA gene, the absolute gene abundance of the narG gene in phases I–III was nearly one to two orders of magnitude higher than in phases IV–V. The conversion of NO3− → NO2− is catalyzed by the napA and narG genes. Therefore, the results indicated that high TOC/TN ratios in phase IV–V had no significant influence on the rates of NO3−–N reduction.
As shown in Fig. 3d, the absolute abundance of nirS in phase IV was nearly one order of magnitude greater than other four phases. The absolute abundance of the nirK gene in phases I–IV was nearly the same order of magnitude, while it slightly decreased in phase V. The absolute abundance of the nosZ gene increased from 2.28 × 104 to 6.59 × 105 copies per g wet sludge during phases I–V as the TOC/TN ratios increased. These results showed that the absolute abundance of denitrification genes did not vary dramatically, suggesting that denitrification was not dominant process accounting for nitrogen removal under the different TOC/TN stress conditions; this was accordant with the results of Table 2.
Furthermore, as shown in Fig. 3e, the absolute abundance of the mcrA gene increased gradually during phases I–IV, while it decreased in phase V. In terms of the dsrA gene, copy numbers increased from 4.14 × 103 to 2.98 × 105 copies per g wet sludge. Notably, as illustrated in phases IV–V, methanogens could compete with sulfate reduction bacteria for the TOC.
Taken together, it is plausible that the co-existence of autotrophic anammox, organotrophic anammox (or DNRA), and denitritation were the primary pathway that accounted for nitrogen removal under TOC/TN stress conditions.
As shown in Table 3, (AOA amoA + AOB amoA + anammox + nrfA)/bacteria, nrfA/(narG + napA), and nrfA were the key factors for NH4+–N transformation in phases I–V. The variable, (AOA amoA + AOB amoA + anammox + nrfA)/bacteria showed a positive relationship with NH4+–N transformation in phases I–II. The AOA amoA and AOB amoA genes are often regarded as NH4+–N to NO2−–N oxidation markers, and nrfA is often regarded as a NO3−–N to NH4+–N reduction makers.24 Thus, results showed that the coupling of partial nitrification, anammox, and DNRA was involved in NH4+–N conversion. The nrfA/(narG + napA) group was the key functional group for NO3−–N consumption in phases III–V. Both narG and napA were regarded as marker genes for NO3−–N to NO2−–N in the first denitrification step. Hence, nrfA/(narG + napA) and nrfA denoted NO3−–N reduction, showing a positive relationship and a negative relationship with NH4+–N conversion, respectively. This result suggested that dissimilatory nitrate reduction to ammonium affected NH4+–N conversion in phases III–V.
Stepwise regression equations | R2 | p value |
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(TOC/TN = 0 and TOC/TN = 0.10) | ||
NH4+–N = 385.638(AOA amoA + AOB amoA + anammox + nrfA)/bacteria + 313.386 | 1.000 | 0.013 |
NO2−–N = 73.546anammox/bacteria + 458.162 | 0.995 | 0.024 |
NO3−–N = −8679.981nosZ/nirS + nirK + 761.040 | 0.983 | 0.008 |
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(TOC/TN = 0.20, TOC/TN = 0.40, TOC/TN = 0.80) | ||
NH4+–N = −2.709nrfA/(narG + napA) − 0.002nrfA + 1143.337 | 0.997 | 0.008 |
NO2−–N = 8.067 × 10−6nirK − 246.61AOB amoA/(nxrA + anammox + nirK + nirS) + 475.431 | 1.000 | 0.017 |
NO3−–N = 0.103(nirK + nirS)/AOB amoA − 0.002nrfA + 1578.045 | 0.982 | 0.005 |
The NO2−–N transformation rates were jointly determined by anammox/bacteria, nirK, and AOB amoA/(nxrA + anammox + nirK + nirS) in phases I–V. The variable anammox/bacteria in the NO2−–N equation which was denoted NO2−–N consumption showed a positive relationship with NO2−–N transformation in phases I–II. The results suggested that anammox were the primary NO2−–N removal pathway under low TOC/TN ratios (≤0.10). The variable nirK genes were regarded as marker genes for NO2−–N to NO in the denitritation step, showing a positive correlation with NO2−–N conversion. The variable AOB amoA/(nxrA + anammox + nirK + nirS) group which was denoted NO2−–N accumulation showed a negative relationship with NO2−–N conversion. This result indicated that the denitritation step was the primary factor which accounted for the NO2−–N transformation at high TOC/TN ratios (≥0.20), while nitrification was inhibited in phases III–V.
The NO3−–N transformation rates were collectively determined by nosZ/(nirS + nirK), (nirK + nirS)/AOB amoA, and nrfA in phases I–V. nirS and nirK genes are often regarded as NO2−–N to NO genes. The nosZ(/nirS + nirK) in phases I–II was negatively associated with NO3−–N transformation rates, suggesting that denitrification was not significant under low TOC/TN ratios (≤0.10). The (nirK + nirS)/AOB amoA in phases III–V was denoted NO2−–N consumption showed a positive relationship with NO3−–N conversion. The more NO2−–N that was consumed, the more NO3−–N was transformed; this was because lower NO2−–N concentrations can reduce its toxic effects on denitrifiers.32
Based on these results, the simultaneous presence of anammox, denitrification, and organotrophic anammox (DNRA) were confirmed in the anammox–SBR system under different TOC/TN constrains. This coupling of anammox, denitrification and DNRA can assist in the simultaneous removal of nitrogen and organic carbon in a single system, rather than over a sequential chain of treatments.40
The direct effect of anammox/bacteria and nirK on NO2−–N transformation rates were positive and values were 0.590 and 0.841, respectively. The direct effect of AOB amoA/(nxrA + anammox + nirK + nirS) on the NO2−–N transformation rate was negative (−0.869) and was lower in strength than the positive direct effects. The indirect effect of anammox/bacteria via AOB amoA/(nxrA + anammox + nirK + nirS) on the NO2−–N transformation rate was positive (0.172), and the indirect effect of nirK via AOB amoA/(nxrA + anammox + nirK + nirS) on the NO2−–N transformation rate was also positive (0.108) (Fig. 4b). However, the indirect effect of AOB amoA/(nxrA + anammox + nirK + nirS) via anammox/bacteria and nirK on the NO2−–N transformation rates were negative. The results showed that anammox/bacteria was the key factor for NO2−–N removal under TOC/TN ratios ≤ 0.10, and nirK was the better predictive variable for NO2−–N removal under TOC/TN ratios ≥ 0.20. The results also indicated that anammox was the primary process responsible for NO2−–N removal in phases I–II, while denitritation was the primary pathway responsible for NO2−–N conversion in phases III–V, which was congruent with the discussion in Section 3.4.
It was found that nosZ/(nirS + nirK) and nrfA had direct negative effects on the NO3−–N transformation rates (−0.758 and −1.012, respectively) in phases I–V. However, (nirK + nirS)/AOB amoA had positive effects on the NO3−–N transformation rate (0.149) (Fig. 4c). The indirect positive effects of (nirK + nirS)/AOB amoA and nrfA via nosZ/(nirK + nirS) were 0.032 and 0.133, respectively. The indirect negative effects of (nirK + nirS)/AOB amoA and nosZ/(nirK + nirS) via nrfA were −0.234 and −0.117, respectively. The results indicated that (nirK + nirS)/AOB amoA and nrfA were the best predictive variable and a major contributing factor to the determination of the NO3−–N transformation rate. The results also suggested that denitrification was not primary factors in phases I–V, while nrfA and denitritation was the primary process responsible for NO3−–N and NO2−–N removal under at TOC/TN ratios ≥ 0.20, supporting the results presented in Section 3.4 and in Table 3.
Compared with functional gene copy numbers, the results have evidenced that key functional gene groups can serve as integrative variables to characterize nitrogen transformation rates in the organotrophic anammox process.41 On the quantitative molecular level, these analyses clearly revealed that the co-existence of autotrophic anammox, denitrification, and DNRA (organotrophic anammox) could useful for simultaneous nitrogen and TOC removal within the organotrophic niche.
In this study, effective sequences were assigned to phyla, class, order, family, and genera using RDP classifier via Silva SSU database. As shown in Fig. 5, a total of 15 bacterial phyla were identified. Planctomycetes was the most dominant phylum in all phases, accounting for 23.40–37.83% (averaging 31.25%). The other dominant phyla were Proteobacteria (11.45–36.92%, averaging 22.22%), Chloroflexi (1.95–28.91%, averaging 17.93%), and Chlorobi (3.54–14.01%, averaging 11.78%). Previous studies have reported that Proteobacteria, Chloroflexi and Planctomycetes were the significant phyla in the nitritation–anammox system.42 Fig. 5 clearly showed that Planctomycetes was more abundant than Proteobacteria, Chloroflexi, and Chlorobi, suggesting that Planctomycetes played the dominant role for nitrogen removal. In addition, as TOC/TN ratios increased from 0 to 0.20, the percentage of Planctomycetes increased from 28.48% to 37.83%. Then, it decreased to 29.59% as the TOC/TN ratio increased to 1.5%. The results indicated that Planctomycetes had higher tolerance for TOC/TN stresses, and that the appropriate addition of acetate and propionate was more favorable to enriching organotrophic anammox bacteria species in the phyla of Planctomycetes; these findings were consistent with the results reported in Section 3.1.
Notably, among Proteobacteria, β-Proteobacteria was the most dominant in all phases, followed by α-Proteobacteria, γ-Proteobacteria, δ-Proteobacteria, and ε-Proteobacteria (Fig. S3a†). Beside the class, the results from Fig. S3b and c† showed that the following major orders, namely Ignavibacteriales, Clostridiales, Phycisphaerales, Brocadiales, Rhodobacterales, and Rhodocyclales, and their corresponding families were shared by five phases, suggesting that these dominant populations played pivotal roles for nitrogen removal in the system.
As shown in Fig. S3d,† a total of 144 genera were assigned and 27 of them were dominant genera. Meanwhile, these genera were identified as belonging to 8 functional groups (Fig. 6). Among them, the anammox group involved “Ca. Brocadia sinica”, “Ca. Jettenia asiatica”, and “Ca. Kuenenia stuttgartiensis”. The relative abundance of “Ca. Brocadia sinica” were 4.32%, 4.43%, 4.73%, 5.3%, and 3.44%, respectively. Compared with “Ca. Brocadia sinica”, the relative abundance of “Ca. Jettenia asiatica” and “Ca. Kuenenia stuttgartiensis” were not detected in the phase I. These results indicated that “Ca. Brocadia sinica” was the dominant anammox bacteria species in the autotrophic system. With the addition of volatile fatty acids, the quantity of “Ca. Brocadia sinica” decreased. This was due to the ability of “Ca. Brocadia sinica” to oxidize volatile fatty acids.34 During phases II–III, the percentage of “Ca. Jettenia asiatica” increased from 4.02% to 4.12%, while it decreased significantly in phase V. “Ca. Kuenenia stuttgartiensis” was detected at the lower TOC/TN ratio and decreased remarkably in phases IV and V. However, the quantity of “Ca. Kuenenia stuttgartiensis” increased from 3.01% to 3.67% with the further increased in the TOC/TN ratio from 0.4 to 0.8. This was due to the K-strategy survival ability of “Ca. Kuenenia stuttgartiensis”,43 which prefers this strategy to low TOC conditions. However, “Ca. Kuenenia stuttgartiensis” was able to adapt to a higher TOC niche during the long-term acclimation. The appearance of “Ca. Jettenia asiatica” and “Ca. Kuenenia stuttgartiensis” in phases II–V resulted in a lack of significant variation in the anammox copy numbers despite suppression of the nitrogen removal activity in phase V.
Based on the results from the nitrogen treatment performance and MiSeq sequencing, it can be concluded that organotrophic anammox bacteria species have the capacity to oxidize acetate and propionate. In addition, “Ca. Brocadia sinica”, “Ca. Jettenia asiatica”, and “Ca. Kuenenia stuttgartiensis” have an organotrophic nature under the appropriate TOC/TN stress conditions. Furthermore, it was evident that higher TOC/TN ratios (>0.40) could result in the community succession of anammox species and alter the character of the microbial communities observed in this study.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c6ra04114k |
‡ These authors contributed equally to this work. |
This journal is © The Royal Society of Chemistry 2016 |