Evelin A. Manoel*ab,
Julia M. Robertb,
Martina C. C. Pintof,
Antonio C. O. Machadob,
Marina D. Bestetif,
Maria Alice Z. Coelhod,
Alessandro B. C. Simasc,
Roberto Fernandez-Lafuente*e,
Jose Carlos Pintof and
Denise M. G. Freireb
aLaboratório Integrado de Pesquisas em Biotecnologia, Departamento de Biotecnologia Farmacêutica, Faculdade de Farmácia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil. E-mail: eamanoel@pharma.ufrj.br
bLaboratório de Biotecnologia Microbiana, Departamento de Bioquímica, Instituto de Química, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil
cLaboratório Roderick Barnes, Instituto de Pesquisas e Produtos Naturais, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil
dBiological System Engineering Group Laboratory, Departamento de Engenharia Bioquímica, Escola de Química, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil
eDepartment of Biocatalysis, ICP-CSIC, Campus UAM-CSIC, C/ Marie Curie 2, Cantoblanco, 28049, Madrid, Spain. E-mail: rfl@icp.csic.es
fLaboratório de Engenharia de Polímeros/EngePol, Programa de Engenharia Química, COPPE, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil
First published on 18th December 2015
This paper shows the production of lipase B from Candida antarctica (LIPB) after cloning the gene that encoded it in Pichia pastoris using PGK as a constitutive promoter. The production of the lipase is lower using this strategy but it avoids the use of inducers like methanol. The performance of this enzyme was compared with that of the commercial enzyme (CALB) after immobilization on different supports in different reactions. As supports, we used Accurel 1000, and three core–shell supports (poly(methyl methacrylate) on the core and on the shell – PMMA/PMMA; poly(methyl methacrylate-co-divinylbenzene) on the core and on the shell – PMMA-co-DVB/PMMA-co-DVB; and poly(styrene-co-divinylbenzene) on the core and on the shell – PS-co-DVB/PS-co-DVB). The popular Novozym 435 was also utilized to assess the features of the new biocatalysts. All these supports adsorbed lipases via interfacial activation of the open form of the lipase on the hydrophobic surface of the supports. The studied reactions were esterification of oleic acid and ethanol in a solvent-free medium, resolution of (±)-1,3,5-O-benzyl-myo-inositol via acylation using vinyl acetate in hexane and resolution of (±)-1,2-O-isopropylidene-3,6-di-O-benzyl-myo-inositol via acylation using vinyl acetate (solvent free system). The results varied depending on the employed supports and on the studied reactions, but some general trends may be observed, pointing to better behavior of LIPB compared to CALB. The use of 4 different supports gave more strength to these differences, as it did not depend on a specific difference between a single support/enzyme pair, but it is more general. Thus, LIPB seems to have some advantages compared to the commercial enzyme on all the reactions assayed in this paper. PS-co-DVB/PS-co-DVB-LIPB is in general the most active preparation (even 50% higher activity was observed). Further investigations are in development to determine the structural reasons for these differences.
Despite the great industrial importance of CALB – it is already sold in free and immobilized form12 by different companies (e.g., Novozym 435 from Novozymes13) – great effort is being put into finding other CALB biocatalysts that are even more efficient. The efforts devoted to improve this lipase utility in the industry should involve all the production of the biocatalysts, from improvements on enzyme production to improvements on immobilization process.
In this context, Pichia pastoris is one of the most widely used yeasts to express heterologous proteins because of its secretory capacity and ability to mass-produce industrial enzymes, including lipases.14 The production method for biomolecules secreted by Pichia pastoris must consider the promoter which the protein gene is linked to. The most studied promoter is AOX.14,15 In this case, the gene that is introduced needs to be induced by methanol and the induction step has to be preceded by a biomass growth phase. However, the different steps involved and the use of methanol make the scale-up process more complex and, in some cases, even unfeasible, depending on the product.
In order to overcome the barriers inherent to use the AOX promoter, constitutive expression promoters have been widely investigated, since it is possible to obtain a culture associated with growth without needing to add neither methanol nor any other inducer. The promoter of the glyceraldehyde-3-phosphate dehydrogenase gene (pGAP) is the most widely used constitutive expression promoter because it is involved in the glycolysis, which is well regulated.16 However, there are other constitutive promoters, like PGK (from the enzyme phosphoglycerate kinase I), whose regulation is also associated with the glycolytic pathway, and which has been little explored in the literature.17,18
Another point to be considered to have a more fruitful design of the biocatalysts is the culture medium. Glycerin is a by-product in the production of biodiesel, and has become almost a residue.19 Thus, currently there are many efforts to find uses to glycerin, and in the case of our proposal, it may be interesting to evaluate their use as carbon source in the production of this new recombinant CALB.
Once the enzyme has been produced in a soluble form in the culture medium, purification is required to ensure the reaction specificity by eliminating other esterases in the crude extract, and, in some cases, the immobilization process is needed. A proper immobilization protocol should facilitate the enzyme reusability and, in certain cases, its stability and efficiency.20–26 In an ideal situation, the coupling of immobilization and purification will save time and costs.27 In the case of lipases, this can be achieved by using hydrophobic supports to immobilize lipases at low ionic strength28 immobilization strategy that even greatly improves the enzyme stability.29 This immobilization technique involves the interfacial activation of the lipase versus the hydrophobic surface of the support,30 and this is the main cause of the lipase stabilization and improved activity. In homogenous aqueous medium, the active center of the lipases is usually secluded from the reaction media by a polypeptide chain, called lid (closed form).31–34 Depending on the external conditions, this lid may move exposing to the medium a large hydrophobic pocket, formed by the internal face of the lid and the areas surrounding the lipase active center. This form of the enzyme, called open form, allows its readily adsorption on any hydrophobic surface, such as oil droplets,35,36 hydrophobic supports,37 open forms of other lipase molecules (homogeneous or heterogeneous dimmers, which may be formed),38,39 other hydrophobic proteins.40
Therefore, as well as the above mentioned strategies, mastery of technologies for synthesizing tailor-made supports could be great advantage point to obtain an even more efficient biocatalyst.41–44 In this context, hydrophobic core–shell polymeric supports synthesized by a combined suspension and emulsion polymerization process have shown a great potential on lipases immobilization procedures.5,45–48 This technique has already been described in the literature.45–48 It involves two fundamental reaction steps. Firstly, a standard suspension polymerization process is carried out in order to produce the polymeric cores. Then, on a second step, the emulsion constituents are added to the reaction system, resulting in the synthesis of in situ nanoparticles. Therefore, these nanoparticles coagulate over the previously produced cores to form a porous shell, resulting in porous core–shell polymeric particles. The final morphology of the particles is affected by the reaction conditions and the compounds added in each step.45–48
The versatility of these supports may be used to tune enzyme properties and permit the design of these supports, allowing the development of new biocatalysts for specific reaction media.45–48
Therefore, the aim of this study was to express recombinant lipase B from Candida antarctica (we will call this lipase as LIPB to distinguish this enzyme from the commercial CALB) in Pichia pastoris using PGK as a constitutive promoter.49 In this work LIPB and CALB were also immobilized on the home-made core–shell polymeric particles, and the performance of the new biocatalysts was compared to that of the commercial one in kinetic resolutions of different pharmaceuticals using different strategies.
The temperature, pH, and dissolved oxygen (DO) were controlled throughout the whole cultivation period. Oxygenation was controlled in order to maintain dissolved oxygen saturation at 30%. A cascade control was used, with a stirrer range from 250 to 700 rpm and gas flow of 0–3 L min−1.
Nitrogen, glycerol, protein, cell concentration, and lipase activity were analyzed periodically.
For immobilized lipases, the reaction was started by the addition of 0.1 g of immobilized enzyme in 9 mL substrate solution in a flask. Periodically samples of 1 mL of the reaction were filtered and the absorbance was determined at 412 nm.
One activity unit (U) was defined as the amount of enzyme necessary to hydrolyze 1 μmol of p-NPL per minute under assay conditions. Enzymatic activity was determined as the average of triplicates.
Initially, the core particles were formed through standard batch suspension polymerization by dispersing the monomer mixture, containing benzoyl peroxide as an initiator, in an aqueous solution (containing poly(vinyl alcohol) as a stabilizer) under agitation (kept at 950 rpm in all experiments). After two hours of suspension reaction, the emulsion constituents (monomer mixture and aqueous solutions of potassium persulfate, used as an initiator, and lauryl sulfate, used as an emulsifier) were added to the reaction medium. In order to control the reaction temperature, the monomer mixture was added continuously at 0.04 L h−1. After the end of the semi-batch emulsion step, reaction was conducted for two hours to favor the coverage of the core particles. At the end of each experiment, the reactor was cooled down and the particles were filtered, washed several times with distilled water, and dried.5,45,48 It is possible to observe the reaction scheme on Fig. 1. It is important to mention that, depending on the supports composition, specific functional groups may be found on the particles surface. Divinylbenzene and styrene based particles contain phenyl groups on their surfaces.57 On the other hand, methyl methacrylate compounds show ester groups, as functional groups, on their surfaces.58 No covalent reaction may be expected, but different interactions are expected to exist between the polymeric particles and the studied enzymes.
The features of the synthesized particles are shown in Table 1. The commercial support Accurel MP 1000 (polypropylene) was also used due to the successful performance of this support in lipase immobilization.30,59–61
Supports | Surface area (m2 g−1) | Average pore size (Å) |
---|---|---|
a These results were shown in Cunha et al.5b This is a polymer support based on a copolymer of styrene and divinylbenzene in the core and the shell.c This is a polymer support based on a copolymer of methyl methacrylate and divinylbenzene in the core and the shell.d This is a polymer support based on an homopolymer of methyl methacrylate in the core and the shell, respectively, with 2 hours of suspension.5 | ||
Accurel MP 1000 | 39.0 | 230.0 |
PS-co-DVB/PS-co-DVBb | 28.9 | 190.4 |
PMMA-co-DVB/PMMA-co-DVBc | 12.6 | 193.4 |
PMMA/PMMAd | 5.0 | 211.6 |
The activity of the supernatant and suspension was monitored using p-NPL. Immobilization was considered to be complete when no significant changes in the activity of the supernatant were detected after 24 h. After immobilization, the suspension was filtered and the supported enzyme was washed several times with distilled water.
(±)-1,3,5-O-Benzyl-myo-inositol (DL-1): 8 mg substrate dissolved in 2.0 mL vinyl acetate in hexane (1:
5.5) and 222.8 U of biocatalyst (80 mg) at 45 °C, during 8 h of reaction time for the core–shell derivatives and Novozyme 435, and 8 h of reaction time (immobilized LIPB and Novozym 435) or 12 h (lyophilized LIPB, solution commercial CALB and immobilized CALB).62
(±)-1,2-O-Isopropylidene-3,6-di-O-benzyl-myo-inositol (DL-2): 10 mg substrate dissolved in 2.0 mL vinyl acetate (solvent-free medium) at 45 °C and 71 U of biocatalyst (26 mg) using p-NPL; when immobilized LIPB and Novozyme 435 were employed, the reactions occurred for 8 h; when lyophilized LIPB, solution commercial CALB and immobilized CALB were used, the reactions occurred for 13 h.63
The reactions were halted by removing the biocatalyst from the reaction medium, and the solvent was evaporated in a vacuum concentrator (Speed Vac Concentrator – Savant SPD 1010-Thermo Scientific). The samples were resolubilized in 1 mL of the mobile phase acetonitrile:
H2O (60
:
40) for the reverse-phase chiral HPLC analysis. The conversion rate and enantiomeric excess of the DL-1 and DL-2 derivatives were calculated as described in ref. 62 and 63, respectively.
It is noteworthy that the production of the lipase is associated with the growth of the biomass as expected since the lipase gene is combined with a constitutive promoter. The lag phase ends after 18 h and the glycerol ends at 42 h. The nitrogen is kept stable during the whole process, indicating that this is not a limiting growth factor.
In Table 2, the main parameters used to evaluate the efficiency of the batch and production at the end of fermentation are shown.
Fermentation time (h) | 42 |
Yx/s | 0.44 ± 0.09 |
Yp/s | 314 ± 51 |
Qp (U g−1 h−1) | 7.15 ± 1.17 |
Activity (U L−1) | 13![]() |
Specific activity (U mg−1) | 55 ± 3 |
Lipase production utilizing the aforementioned promoter is not as high as the one achieved employing the most strong promoter usually employed on papers (pAOX), it is 3.5 fold lower when compared with the work made by Vadhana and collaborators.64 However, the advantage of using a constitutive promoter (PGK) rather than an inducible promoter (pAOX) may compensate this lower lipase production. It must be considered that in large scale the storing and the use of methanol may promote some difficulties.65
Candida antarctica lipase B was produced successfully in Pichia pastoris using a PGK constitutive promoter, but better production strategies (fed-batch and continuous) and genetic engineering (heterologous constructions with multiple copies of the synthetic gene) are being studied aiming to increase the productivity of the process to make it competitive compared to inductive expression.
After 42 h of growth, the cells were removed by centrifugation and the supernatant containing the enzyme (13903 Ut L−1, volumetric activity) was lyophilized for further immobilization experiments.
Supports | Esterification activity (U gsupport−1) |
---|---|
LIPB | |
Accurel MP 1000 | 1.97![]() |
PS-co-DVB/PS-co-DVB | 2.95![]() |
PMMA-co-DVB/PMMA-co-DVB | 1.75![]() |
PMMA/PMMA | 1.35![]() |
Novozyme 435 | 2.72![]() |
![]() |
|
CALB | |
Accurel MP 1000 | 1.77![]() |
PS-co-DVB/PS-co-DVB | 1.01![]() |
PMMA-co-DVB/PMMA-co-DVB | 1.81![]() |
PMMA/PMMA | 1.29![]() |
Novozyme 435 | 2.72![]() |
Commercial lipase | X (%) | eep | E | Initial velocity (μmol min−1 g−1) × 102 |
---|---|---|---|---|
a Batch conditions: 45 °C; 4 mg mL−1 of substrate; 222.8 U of enzyme; 8 h. Hexane as solvent.b 12 h reaction time. | ||||
Lyophilized CALB | 20b ± 0.1 | 99 | >200 | 3.30 |
CALB immobilized on Accurel MP 1000 | 40.6b ± 0.2 | 99 | >200 | 6.71 |
CALB immobilized on PS-co-DVB/PS-co-DVB | 42.0b ± 0.1 | 99 | >200 | 6.94 |
CALB immobilized on PMMA-co-DVB/PMMA-co-DVB | 40.0b ± 0.2 | 99 | >200 | 6.61 |
CALB immobilized on PMMA/PMMA | 31.0b ± 0.5 | 99 | >200 | 3.21 |
Novozyme 435 | 49.7a ± 0.1 | 99 | >200 | 8.21 |
Recombinant lipase | X (%) | eep | E | Initial velocity (μmol min−1 g−1) × 102 |
---|---|---|---|---|
Lyophilized LIPB | 3.0b ± 0.5 | 99 | >200 | 0.74 |
LIPB immobilized on Accurel MP 1000 | 41.0a ± 0.5 | 99 | >200 | 10.16 |
LIPB immobilized on PS-co-DVB/PS-co-DVB | 47.5a ± 0.1 | 99 | >200 | 11.77 |
LIPB immobilized on PMMA-co-DVB/PMMA-co-DVB | 41.2a ± 0.1 | 99 | >200 | 10.21 |
LIPB immobilized on PMMA/PMMA | 36.2a ± 0.1 | 99 | >200 | 5.30 |
All catalysts were capable of catalyzing the acetylation of DL-1 to obtain the product L-(−)-2 with high eep (99%), and a high enantiospecificity (E > 200). The main difference was in the initial activity.
Analyzing the group of the produced biocatalysts in which CALB was employed, the highest activity is obtained using the commercial biocatalyst. The lyophilized enzyme is the least active form of the lipase, as may be expected because it will be forming aggregates, except PMMA/PMMA-CALB that was significantly less active the other home-made preparations. All the other preparations offered very close activity, even though the enzyme loading was higher for Accurel and minimal for PS-co-DVB/PS-co-DVB.
The lyophilized LIPB is even less active than CALB, however this behavior is a result of many factors, as the commercial preparation may have different components compared with the home-made lipase. Except PMMA/PMMA-LIPB, all immobilized preparations were found to be slightly more active (25%) than the commercial Novozym 435. All the home-made preparations counterparts prepared using LIPB were more active than using CALB, in some cases by more than 50% (e.g., 65% using PMMA/PMMA). Using Accurel or PS-co-DVB/PS-co-DVB, where the enzyme loadings are similar using both enzymes, the improvement in activity of this recombinant enzyme compared to the commercial one is 50%. Curiously, using PMMA-co-DVB/PMMA-co-DVB, the differences in activity almost matched the differences in loading.
CALB (commercial) | X (%) | eep | E | Initial velocity (μmol min−1 g−1) × 102 |
---|---|---|---|---|
a Batch conditions: 45 °C; 5 mg mL−1 of substrate; 71 U of enzyme; 8 h reaction time; solvent-free reaction; vinyl acetate as acylating agent and solvent.b Batch conditions: 45 °C; 5 mg mL−1 of substrate; 71 U of enzyme; 13 h reaction time; solvent-free reaction; vinyl acetate as acylating agent and solvent. | ||||
Lyophilized CALB | 28.0b ± 0.8 | 99 | >200 | 4.93 |
CALB immobilized on Accurel MP 1000 | 40.8b ± 0.1 | 99 | >200 | 7.18 |
CALB immobilized on PS-co-DVB/PS-co-DVB | 45.3a ± 0.5 | 99 | >200 | 7.97 |
CALB immobilized on PMMA-co-DVB/PMMA-co-DVB | 43.3a ± 0.2 | 99 | >200 | 7.62 |
CALB immobilized on PMMA/PMMA | 33.0b ± 0.5 | 99 | >200 | 4.21 |
Novozyme 435 | 49.0a ± 0.1 | 99 | >200 | 8.62 |
Recombinant lipase | X (%) | eep | E | Initial velocity (μmol min−1 g−1) × 102 |
---|---|---|---|---|
Lyophilized LIPB | 18.0b ± 0.8 | 99 | >200 | 4.75 |
LIPB immobilized on Accurel MP 1000 | 48.0a ± 0.5 | 99 | >200 | 12.67 |
LIPB immobilized on PS-co-DVB/PS-co-DVB | 49.3a ± 0.5 | 99 | >200 | 13.01 |
LIPB immobilized on PMMA-co-DVB/PMMA-co-DVB | 48.6a ± 0.2 | 99 | >200 | 12.83 |
LIPB immobilized on PMMA/PMMA | 36.0b ± 0.5 | 99 | >200 | 5.88 |
Again, E and eep were very high for all catalysts but there were clear differences in activity.
The lyophilized preparations of both enzymes have similar activities and are the lowest ones, as mentioned before, because the use of an aggregated enzyme may offer complex results and difficult the understanding, although it is possible to assume the existence of diffusional problems. CALB offered the highest activity using the commercial preparation, shortly followed by the home-made preparations, except for PMMA/PMMA-CALB that was less than 50% active. Again, the activity of CALB immobilized on PMMA-co-DVB/PMMA-co-DVB was higher than should be expected from the low loading of the enzyme in the support, almost matching the activity of the other home-made preparations when the loading was almost 60% of that of the other preparations.
The use of the biocatalysts from LIPB provided higher activities than using CALB, the difference in activity is more than 50% for all preparations, and the activity comparing with Novozym 435 is more than 50% in the case of PS-co-DVB/PS-co-DVB-LIPB. Again in the case of PMMA-co-DVB/PMMA-co-DVB, the difference in activity almost matches the difference in loading, suggesting a similar specific activity of the enzyme when immobilized on these support.
The immobilized LIPB proved more efficient in the enantioselective resolution of DL-2 than the derivatives from commercial CALB, including Novozyme 435, since it achieved maximum conversion in a shorter time (8 h). The higher conversion of DL-2 than of DL-1 could be due to the fact that the structure of DL-2 is less sterically hindered than the structure of DL-1 (in this case, the presence of benzyl groups could have hampered the interaction between the substrate and the biocatalyst).
The product, L-5, obtained from Novozyme 435 and LIPB in PS-co-DVB (core and shell) was found to have very high enantiomeric excess (eep of 99%) and high enantiomeric ratio (E).
These data gave an improvement of a 50% of the productivity (considering the whole reaction cycle) using PS-co-DVB-LIPB instead of Novozym 435 using DL-2 as substrate (0.060 mgproduct gderivative−1 h−1).
After 12 reaction cycles (considering an 8 h reaction) no significant loss in the conversion of DL-2 was found when the recombinant LIPB derivative immobilized on PS-co-DVB was used throughout all the cycles conducted. The other derivatives suffered a slight decrease in conversion after the 7th reaction cycle, including Novozym 435 (Fig. 5).
All preparations could be stored at 4–30 °C for 60 days and keeping more than 95% of the initial activity.
The recombinant LIPB immobilized on PS-co-DVB proved to be the most efficient in the enantioselective resolution of both racemic derivatives, DL-1 and DL-2. The productivity for DL-2 resolution was 50% higher than the commercial Novozym 435, and the new derivative was operationally more stable than Novozyme 435. The products obtained had a high level of purity (ee of 99% for both derivatives). Both products of the enantioselective reaction, L-2 and L-5, obtained from the racemic derivatives (DL-1 and DL-2, respectively), are intermediates from different pharmacological pathways involved in the synthesis of building blocks for drugs that inhibit the etiological agent of Chagas disease, Trypanosoma cruzi. These results constitute a successful, novel approach for simultaneously evaluating new technologies for producing, immobilizing and using Candida antarctica lipase B.
The better enzyme performance on these reactions has encouraged our group to analyze the differences between LIPB and CALB. At first glance, the expression of the enzyme in Pichia may gave a more glycosylated protein, but preliminary results suggest a less compact structure of the new enzyme; the full characterization of this enzyme is under study and will be the subject of a forthcoming paper.
• The results shown in this paper are protected by the Brazilian patent application number US 20110183400 A1.49
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c5ra22508f |
This journal is © The Royal Society of Chemistry 2016 |