Chandrashekhar Sharanab,
Puneet Khandelwalab and
Pankaj Poddar*abc
aPhysical & Material Chemistry Division, CSIR-National Chemical Laboratory, Pune-411008, India p.poddar@ncl.res.in
bAcademy of Scientific and Innovative Research, Anusandhan Bhawan, 2 Rafi Marg, New Delhi-110001, India
cCenter of Excellence on Surface Science, CSIR-National Chemical Laboratory, Pune-411008, India
First published on 28th November 2014
There is a tremendous interest in newly-discovered, green, room-temperature, biological routes for the fabrication of biologically-benign functional nanostructures. The bottom-up biogenic synthesis, where the precursor molecules form crystalline solids at the nanoscale by a redox process, has been validated over the years and gained its popularity. However, a new top-down technique has recently been developed by our group, in which small isotropic nanoparticles (NPs) are formed by the break-down of chemically-synthesized anisotropic rod or plate-shaped NPs using microbes (termed as biomilling). This technique, which holds great promise, is still in its infancy. Here, an improved process with an easy isolation of NPs from the biomass and better control of the technique is reported. This novel technique is demonstrated to break-down the chemically synthesized ZnO nanorods (NRs), ∼250 nm in length, to small quasi-spherical ZnO NPs (∼10 nm in diameter) possibly due to the proteins secreted by the yeast (Saccharomyces cerevisiae), which also led to the formation of “corona” around the NPs. The UV-vis, PL and FTIR results show the dynamic nature of the protein corona, which is further supported by the SDS-PAGE study of the extracellular proteins. The SDS-PAGE study of the intracellular proteins shows the over-expression of a single protein which is supposed to have a role in zinc transport in the cells. The ICP-OES results show the accumulation of a higher amount of zinc in the yeast cells as biomilling progresses, while the extracellular zinc contents were almost same. Therefore, we believe that the yeast cells play an important role in the biomilling process by secreting the proteins and maintaining the zinc content in the extracellular fluid. The biomilled NPs exhibit a uniform dispersity and better aqueous stability than chemically synthesized ZnO NRs.
In our first report, we demonstrated the synthesis of very small NPs (<10 nm) by the break-down of chemically synthesized BiOCl particles, much larger in size, using biological approach and we termed it, for the first time, as “biomilling”.12 In our next study, the biomilling of chemically-synthesized BaTiO3 micro-scaled particles using yeast (S. cerevisiae) biomass was also reported.13 However, as any other new process, the biomilling, being in its infancy, requires new ideas. Moreover, it is full of challenges that require a lot of efforts until this novel process reaches its maturity and becomes industrially feasible. Some of the challenges are (1) easier isolation of biomilled NPs from the biomass, (2) understanding the biochemical mechanism of biomilling, and (3) scaling-up the process.
In this study, we chose the yeast S. cerevisiae as a model system to study the biomilling of the ZnO nanorods (NRs) because S. cerevisiae is highly tolerant to metal ions,14 and it is also known for its ability to accumulate certain metal ions such as zinc, copper and manganese, through various physico-chemical processes.15 At least 31% of yeast genes have homologs in the human genome.16 Moreover, the complete genome and proteome database is readily available.17 S. cerevisiae has been utilized since ancient times for the production of bread and beer etc., and is considered to be safe for human consumption.18 Therefore, biomilled NPs can be used for drug delivery because it is the nanoparticle–corona complex rather than the bare nanoparticles which interact with biological system, and in accord to that, can change the fate of NPs in the living systems.19,20
ZnO is well known for its unique properties such as piezoelectricity,21 UV absorbance,22 sensitivity to gases and chemical agents,23 catalysis24 etc. These unique properties lead to an extensive applicability of this material for solar-photovoltaic,25–28 piezoelectric-transducers,29 short-wavelength lasers,30 phosphors,31 light emitting diodes32 etc. Recently, ZnO is proved to be an excellent material for the biological applications such as antimicrobial agents,31,33 UV-protectants in sunscreen lotions, cancer treatment34,35 etc.
There are many methods available in the literature for the synthesis of ZnO NPs such as sol–gel,36 simple solution combustion method,37 chemical vapor synthesis,38 hydrothermal method,39 microwave assisted synthesis of microcrystals,40 microwave assisted hydrothermal synthesis of nanowires,41 and laser ablation.8 However, the green top-down biological method to synthesize ZnO NPs is not reported so far. As yeast cells are endowed with various biomolecules that could potentially break-down the larger particles, the biomilling technique efficiently utilizes these cells for the synthesis of protein-capped quasi-spherical ZnO NPs.
Here, we report the biomilling of chemically-synthesized ZnO NRs (∼250 nm in length) to demonstrate the synthesis of very small, protein-capped, quasi-spherical ZnO NPs (∼10 nm in diameter). Here, efforts are made to address some of the challenges associated with the biomilling process reported by our group recently.12,13 The modified biomilling procedure developed by us in this report, has several inherent advantages over our earlier reported work as we demonstrate that it is possible to (1) isolate the biomilled NPs with minimum efforts, (2) separate the top-down biomilling and bottom-up biosynthesis processes (if the organism itself, has NP synthesis ability by extra/intracellular reduction of free zinc ions to form NPs), and (3) differentiate the yeast cell involvement in the biomilling process. Detailed experimental investigation proves the formation of well-crystalline, small-sized protein-capped, quasi-spherical ZnO NPs after nearly 168 h of biomilling. The UV-vis, photoluminescence (PL) and FTIR spectroscopic studies as a function of biomilling-time, show the dynamic nature of protein corona on the ZnO NPs, which is further supported by the SDS-PAGE analysis of the extracellular fluid. We believe that the yeast cells provide an important role in the process of biomilling by accumulating a high amount of zinc content in the cells while the zinc content in extracellular medium almost same as shown by the ICP-OES analysis. The biomilled ZnO NPs show enhanced stability and improved dispersibility in aqueous medium than chemically synthesized ZnO NRs.
UV-visible and photoluminescence spectroscopic studies were conducted to analyze the optical properties of the biomilled ZnO NPs. Absorbance spectra were recorded using a Jasco UV-vis dual-beam spectrometer (Model V570) operated at a resolution of ∼2 nm. Fluorescence emission spectra were recorded using a Cary Eclipse photoluminescence spectrophotometer from Varian equipped with a xenon flash lamp. Binding study of proteins on the surface of biomilled ZnO NPs was performed by FTIR. FTIR spectra were obtained using a Perkin Elmer Spectrum One instrument. The spectrometer operated in the transmission mode at a resolution of 4 cm−1. The samples for FTIR studies were mixed with KBr powder and allowed to dry and the dried powder was directly used for FTIR studies.
In order to reveal the extracellular and intracellular protein expression profile as a function of biomilling time, 1D sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) (18%) was performed. The cells were harvested by centrifugation at 5000 rpm for 5 min at 4 °C, washed twice with normal saline. The intracellular protein was extracted from cells by using SDS and β-mercaptoethanol treatment. From the cell supernatant, the extracellular protein was extracted by precipitation with trichloroacetic acid (TCA). The protein samples were mixed in 1:
1 ratio with 2× loading buffer containing 4% SDS and 8% β-mercaptoethanol, were boiled for 5 min before loading to SDS-PAGE. We used standard molecular weight marker M3913, obtained from Sigma Aldrich.
Inductively coupled plasma-optical emission spectroscopy (ICP-OES) was used to analyze the extracellular as well as intracellular zinc content as a function of biomilling time. For extracellular zinc content, the samples taken during biomilling were centrifuged at 10000 rpm for 15 min at 4 °C. The as-obtained supernatant was collected and filtered by nylon membrane filter paper with pore size of 0.2 μm before measuring the zinc content. The experiment was performed in duplicates. To analyze the intracellular zinc content, a modified method of Demirci43,44 was used for sample preparation. Briefly, the S. cerevisiae cells were harvested by centrifugation at 5000 rpm for 5 min at 4 °C. The cells were washed twice with normal saline solution and allowed to dry. The cell dry mass of 100 mg were taken in a long neck flask and 5 mL of conc. nitric acid was added and heated to 160 °C. Then, 2 mL of conc. sulphuric acid was added to it. To maintain the oxidizing environment, small amount of nitric acid was added till the solution gets colorless. After cooling-down to RT, the deionized water was added to make the final volume 50 mL. The content was filtered with 0.2 μm pore size nylon membrane before measuring the zinc content by ICP-OES, model Spectro Arcos (ARCOS-FHS-12) from SPECTRO Analytical Instruments GmbH.
Thermogravimetric analysis (TGA) experiments were carried-out in the temperature range of 25–750 °C on a SDT Q600 TG-DTA analyzer under N2 atmosphere at a heating rate of 10 °C min−1. A PALS Zeta Potential Analyzer Ver 3.54 (Brookhaven Instrument Corps.) was used to determine the electrophoretic mobilities. The mobilities were converted to zeta potential (ζ) using the Smoluchowski model.
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Fig. 2 (a) AFM height image showing the presence of quasi-spherical ZnO NPs after 168 h of biomilling and (b) its 3D view. |
To study the effect of biomilling on crystalline quality and crystalline phases of chemically synthesized ZnO NPs, PXRD measurements were performed on biomilled ZnO NP samples collected at different time intervals, and presented in Fig. 3. The prominent peaks situated at 2θ values of 31.6°, 34.2°, 36.1°, 47.3°, 56.3°, 62.7°, 66.2°, 67.5° and 68.8° correspond to the (100), (002), (101), (102), (110), (103), (200), (112) and (201) planes, respectively, and can readily be indexed to hexagonal wurtzite structure of ZnO (JCPDS card no. 36-1451). There was no significant change found in the relative peak intensities upon comparison of various XRD patterns. This was due to the fact that, not all the rod-shaped particles got biomilled into smaller quasi-spherical particles and partially-biomilled/completely un-biomilled particles present in the sample may still contributes to the XRD signals.
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Fig. 3 XRD patterns of ZnO NPs at different stages (0, 24, 48, 72, 96, 120, 144 and 168 h) of biomilling. The XRD profile was indexed to the PDF card no. 36-1451 represented by black vertical lines. |
The effect of biomilling on the optical properties of ZnO NPs was studied by detailed UV-vis absorption and fluorescence emission spectroscopy measurements on the biomilled ZnO NPs taken out at a time interval of 24 h for a period of 168 h. The time-dependent changes in the UV-vis absorption spectra of the ZnO NPs after biomilling were shown in Fig. 4. It was noticed that most of the spectra show three characteristic features in the UV-vis range: (1) a broad absorption in the UV range centered at ∼265 nm due to the π–π* transition in the aromatic amino acids containing coronal proteins,45 (2) ∼374 nm characteristic signature of ZnO NPs due to excitonic transition at room temperature,46,47 and (3) ∼400 nm (Soret band) due to the π–π* transition in porphyrin containing proteins.48 The observed small shift in the ∼265 nm peak with biomilling time was attributed to the dynamic nature of proteins binding to the ZnO NPs. Moreover, a small shift in the ∼374 nm peak as a function of biomilling time was also observed which can be related to the change in the dielectric environment due to the change in the composition of coronal proteins.49 The shift in ∼374 nm peak with change in the size of particles cannot be attributed to the quantum size effect, because the mean diameter of particles after biomilling was ∼10 nm, which was higher than the reported excitonic Bohr diameter for ZnO (∼6.5 nm).50
Further, the ratio of absorbance ∼374 nm and ∼265 nm (A374/265) was used to assess the relative concentration of ZnO NPs with respect to the concentration of proteins in the biomilled samples. It was observed that the ZnO NPs concentration with respect to protein concentration, was increased almost linearly with time (Fig. 4 inset). The PL and FTIR results further supported the dynamic nature of coronal proteins (ESI, Fig. S1 and S2†). TGA analysis indicated the presence of protein corona on the biomilled ZnO nanoparticles (ESI, Fig. S3†).
In order to gain deeper insight in to the mechanism of biomilling process, SDS-PAGE and ICP-OES analysis were performed to determine the intracellular and extracellular protein expression profile and aqueous zinc content in the cell and extracellular fluid, respectively, as a function of biomilling time. To study the expression profile of extracellular and intracellular proteins secreted by yeast, S. cerevisiae in the absence and presence of ZnO NPs as a function of biomilling time, SDS-PAGE analysis was performed. The expression profile of extracellular proteins in the absence and presence of ZnO NPs after every 48 h of time period such as 24 h, 72 h, 120 h and 168 h was shown in Fig. 5. It was observed that in presence of ZnO NPs, most of the proteins found to be under expressed. However, after 72 h of biomilling, two proteins with MW ∼6.5 kDa and ∼30 kDa were found to be over expressed. Furthermore, after 120 h of biomilling, only one protein with MW ∼39 kDa was found which was consistently present throughout the biomilling process and became more prominent at 168 h of biomilling. The expression profile of intracellular proteins in the absence and presence of ZnO NPs after every 48 h of time period was shown in the Fig. 6. It was observed from the Fig. 6, that a protein with MW ∼ 30 kDa showed increase in the expression with biomilling time and assumed to be related to the zinc transport in the yeast cells as zinc transporter.
In order to analyze the change in concentration of extracellular and intracellular zinc content as a function of biomilling time, ICP-OES measurements were performed and presented in Fig. 7. It was noticed from the Fig. 7 that at 0 h, zinc content in the extracellular fluid was found almost negligible whereas, it was ∼1 mg L−1 for intracellular zinc content. After 24 h, the extracellular zinc content was increased to ∼0.25 mg L−1 and remains almost constant up to 72 h. However, in the same time, the intracellular zinc content was continuously increased to ∼18.4 mg L−1. After 96 h, the extracellular zinc content was increased by 10 times to ∼2.75 mg L−1 and can be related to the release of zinc from the cells which lead to decrease in the intracellular zinc content to ∼14.5 mg L−1. The intracellular zinc content was further decreased to its minimum level ∼6.9 mg L−1. However, the exact reason behind the decrease in the intracellular zinc content is not known. It was observed that after 120 h, the extracellular zinc content was further decreased to ∼1.25 mg L−1 and ∼0.75 mg L−1 for 144 h of biomilling. Therefore, it is concluded that in the course of biomilling, yeast cells maintain the zinc content almost same in the extracellular fluid.
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Fig. 7 The extracellular (red color) and intracellular (green color) zinc content at different stages (24, 48, 72, 96, 120, 144 and 168 h) of biomilling. |
It is known that the yeast S. cerevisiae secretes a fair amount (few μg mL−1) of proteins in the extracellular medium51 which was also observed in our SDS-PAGE study. Some of these extracellular proteins may get attached to the positively charged ZnO NRs by electrostatic interaction and can form the protein corona. The change in the surface charge from ∼+12.3 mV for chemically synthesized NRs (at 0 h) to ∼−29.5 mV (after 24 h) for biomilled ZnO NPs was observed in our zeta potential study (Fig. S4†) which indicates the attachment of proteins to the surface of ZnO NPs. These proteins may act as chelating agents and leach-out the zinc ions. The leached-out ions can be taken up by yeast cells and stored in the vacuole, as it is the major site for zinc storage in the yeast cells.52 The yeast S. cerevisiae is very well studied organism for zinc transport and trafficking.53 This was also evident from our ICP-OES study that a higher amount of zinc content present inside the cells as compared to the extracellular zinc content. Therefore, we believe that the yeast cells play an important role in the biomilling by secreting the proteins as well as maintaining the zinc content almost same in the extracellular fluid throughout the biomilling process (Scheme 1).
The dispersibility of the biomilled ZnO NPs in the aqueous medium was compared with the chemically synthesized ZnO NRs and was shown in Fig. 8. After 2 h, the absorbance at 374 nm was decreased by 10% for the biomilled ZnO NPs and 80% for chemically synthesized ZnO NRs. Further, the stability of both NPs suspension was compared at different time periods and biomilled ZnO NPs were found to be highly stable in aqueous suspension for a long time (Fig. 8, inset).
Footnote |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c4ra10077h |
This journal is © The Royal Society of Chemistry 2015 |