Francesca
Ceccacci
a,
Luisa
Giansanti
a,
Giovanna
Mancini
*bc,
Paolo
Mencarelli
a and
Alessandro
Sorrenti
a
aDipartimento di Chimica, Università degli Studi di Roma “La Sapienza”, P. le A. Moro 5, 00185, Roma, Italy. E-mail: paolo.mencarelli@uniroma1.it; Fax: +3906490421; Tel: +390649913078
bCNR, Istituto di Metodologie Chimiche, Dipartimento di Chimica “La Sapienza”, P. le A. Moro 5, 00185, Roma, Italy. E-mail: giovanna.mancini@uniroma1.it; Fax: +3906490421; Tel: +390649913769
cCentro di Eccellenza Materiali Innovativi Nanostrutturati per Applicazioni, Chimiche Fisiche e Biomediche, Via Elce di Sotto, 06123 Perugia, Italy
First published on 30th October 2006
The synthesis and characterization of two new chiral biphenylic derivatives is reported. The rotational barriers have been calculated on simpler homologues. The racemic mixtures of the two compounds have been used as probes of chirality for exploring the sites of chiral recognition in chiral micellar aggregates. Results suggest that one of the sites of chiral discrimination is the hydrophobic part of the aggregates, far from the stereogenic centres.
In the study of polymolecular aggregates as bio-membrane models it is of crucial interest to identify the non- covalent interactions responsible for the organization of the aggregates, for the transfer of the chiral information from the monomer to the aggregates and for aggregate recognition properties. We have largely investigated micellar aggregates formed by sodium N-dodecanoyl-L-prolinate, 1, as bio-membrane models and found that they are capable of discriminating the enantiomers of dipeptides3j and biphenylic derivatives3d,k used as probes of chiral recognition. In fact, under aggregating conditions, the diastereomeric interactions between chiral assembly and probe enantiomers yielded diastereomeric 1H NMR signals. The modulation of the molecular structure of the chiral probe allowed us to tune the interactions with the aggregates and to identify some sites of chiral recognition.3j,k In the case of biphenylic derivatives the choice of substituents and their position on the aromatic rings, besides determining the mode of association and interaction with the aggregates, also influences the rotational barrier . In the case of a sufficiently low rotational barrier the transfer of the chiral information from the assembly to the probe may be revealed as an imbalance in the 1 : 1 equilibrium ratio of the interconverting enantiomers of the probe, i.e. as a deracemization process.3i The occurrence of a deracemization , resulting from different association constants of the enantiomers with the chiral aggregate, provides an opportunity to investigate chiral recognition also by circular dichroism (CD). This may be an important point in this type of investigation, because often NMR fails to detect enantiodiscrimination due to broad signals of surfactants under aggregating conditions. The biphenylic derivatives we had previously used bear the hydrophobic chain that binds the moiety to the aggregates in an ortho position. In order to further investigate the interactions involved in the chiral recognition process in aggregates formed by 1, we took into consideration, as chiral probes, two new biphenylic derivatives, namely 2-carboxy-2′-methoxy-4′-N-dodecyl-N-methylamino-6-nitrobiphenyl, 2a, and N,N-dimethyl-N-dodecil-N-[4-(2-methoxycarbonyl-6-nitrophenyl)-3-methoxy]-phenylammonium bromide, 3a, both bearing a hydrophobic chain in a para position. Moving the hydrophobic chain from an ortho to a para position should change the orientation of the aromatic portion of the probe inside the aggregates.
Biphenyl derivative 2a features functional groups in the ortho positions that are known to determine a rotational barrier that easily allows enantiomer interconversion at ambient temperature as we found for 2-carboxy-2′-methoxy-6-nitrobiphenyl, 4, for which a rotational barrier of 22 kcal mol–1 was measured.4 The presence of a dialkylamino group in the para position of 2a, should lead to an even lower barrier since it is known that the presence of an electron-donating substituent in the para position on one phenyl ring, combined with electron-withdrawing groups on the other, decreases the rotational barrier of biphenyls.5
Biphenyl derivative 3a features a similar substitution pattern, with two modifications: the presence of the carboxymethyl group instead of the carboxylic group and the presence of a trialkyl ammonium group instead of the dialkylamino group in the para position. Both modifications should substantially increase the rotational barrier with respect to 2a. The former due to an increase of the steric hindrance at the ortho positions, the latter because it is known that the presence of an electron-withdrawing substituent in the para position enhances the rotational barrier .5
Here we report on the preparation of 2a, and 3a, on the theoretical calculation of the rotational barriers for the simpler homologues 2-carboxy-2′-methoxy-4′-N,N-dimethylamino-6-nitrobiphenyl, 2b and N,N,N-trimethyl-N-[4-(2-methoxycarbonyl-6-nitrophenyl)-3-methoxy]-phenylammonium3b, and on the discrimination of biphenylic enantiomers of 2a, and 3a, in micellar aggregates formed by 1, observed by 1H NMR.
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Chart 1 |
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Scheme 1 Synthetic pattern. (i) Cu/DMF at 343 K; (ii) 10% NaOH under reflux; (iii) CH3Br in acetone. |
In previous papers we showed that the rotational barrier of a substituted biphenyl can be reliably evaluated by DFT calculations at the B3LYP/6-31G(d) level of theory. The results obtained for the rotational barriers, at such level of theory, were in good agreement with the experimental values.3k,4 Our observation of the good behaviour of the DFT approach was in accordance with results obtained by other authors in the calculations of rotational barriers in biphenyls.7 Therefore the same DFT approach, at the same level of theory, was used in this work for the calculations of the rotational barriers of 2b and 3b (all the calculations were carried out by using the Gaussian 98 or Gaussian 03 packages8).
The ground state structures and the transition states for the enantiomerization of 2b and 3b were fully optimized, and each stationary point found was characterized by a frequency calculation. For the structures featuring one imaginary frequency and therefore found to be a saddle point , the normal mode corresponding to the imaginary frequency, was animated by using the visualization program Molden.9 In this way it was verified that the displacements that compose the mode lead to the two enantiomeric structures.
For compound 2b six different minima were found for the non-planar ground state (Fig. 1), and two different structures, (E) and (Z), were found for the transition state of the enantiomerization pathway (Fig. 2). The minima differ for the biphenyl dihedral angle and for the rotation of the substituents. In Table 1 total energies, relative energies and biphenyl dihedral angles for the structures obtained from the DFT calculations on 2b are reported.
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Fig. 1 Structures of the six minima found for 2b. |
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Fig. 2 Structures of the two transition states found for the enantiomerization of 2b. |
E a (a.u.) | E rel /kcal mol–1 | Dihedral angle, degree | |
---|---|---|---|
a Zero-point corrections included. | |||
Minimum 1 | –1104.5510 94 | 0.00 | 126.1 |
Minimum 2 | –1104.5502 16 | 0.55 | 125.5 |
Minimum 3 | –1104.5493 93 | 1.07 | 73.2 |
Minimum 4 | –1104.5489 34 | 1.36 | –82.6 |
Minimum 5 | –1104.5484 40 | 1.66 | –116.5 |
Minimum 6 | –1104.5470 84 | 2.52 | –82.7 |
(Z)-TS | –1104.5202 34 | 19.36 | 176.7 |
(E)-TS | –1104.5153 58 | 22.42 | –1.9 |
For compound 3b five different minima were found for the non-planar ground state (Fig. 3), and four structures, two of (E) configuration and two of (Z) configuration, were found for the transition state of the enantiomerization pathway (Fig. 4). The minima differ for the biphenyl dihedral angle and for the rotation of the substituents. In particular, the more stable minima 1 and 2 present the methoxycarbonyl moiety in the more stable Z conformation, whereas minima 3, 4, and 5 present the less stable E conformation. This feature is also found for the transition states in that in the least stable (E)-TS2 transition state , the methoxycarbonyl moiety is in the less stable E conformation. In Table 2 the total energies, relative energies and biphenyl dihedral angles for the structures obtained from the DFT calculations on 3b are reported.
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Fig. 3 Structures of the five minima found for 3b. |
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Fig. 4 Structures of the four transition states found for the enantiomerization of 3b. |
E a (a.u.) | E rel /kcal mol–1 | Dihedral angle, degree | |
---|---|---|---|
a Zero-point corrections included. | |||
Minimum 1 | –1183.475 232 | 0.00 | –87.4 |
Minimum 2 | –1183.474 762 | 0.29 | 86.4 |
Minimum 3 | –1183.457 565 | 11.09 | –92.4 |
Minimum 4 | –1183.457 448 | 11.16 | 86.0 |
Minimum 5 | –1183.457 031 | 11.42 | 92.4 |
(Z)-TS1 | –1183.433 711 | 26.06 | 176.6 |
(Z)-TS2 | –1183.433 187 | 26.38 | 177.8 |
(E)-TS1 | –1183.433 047 | 26.47 | –7.3 |
(E)-TS2 | –1183.421 584 | 33.66 | 2.2 |
Since six minima and two transition states were found for 2b, and five minima and four transition states were found for 3b, the rotational barriers for the enantiomerization of 2b and 3b, were obtained as the difference between the Boltzmann averaged total energy of the transition states and the Boltzmann averaged total energy of the minima. The results are reported in Table 3.
2b/kcal mol–1 | 3b/kcal mol–1 |
---|---|
19.00 | 26.13 |
The values obtained for the rotational barriers confirm our expectations (see above): the rotational barrier of 2b is 3 kcal mol–1 lower than that of 4, whereas 3b features a barrier which is 4 kcal mol–1 higher than that of 4. Our computational finding thus agrees with what was experimentally known about the effect of para substituents on the rotational barriers of biphenyls.5 In order to illustrate the consequence of such barriers on the enantiomerization rate, it is useful to translate the barrier values into the corresponding reaction half-time (τ1/2). At 298 K, a rotational barrier of 19 kcal mol–1 corresponds to a τ1/2 of about 1 s. In other words, the racemization reaction of 2b is complete in about 10 s. At variance, a rotational barrier of 26 kcal mol–1 corresponds, at 298 K, to a τ1/2 of about 19 days; therefore, at room temperature, 3b requires more than 6 months to completely racemize. These data should be taken into consideration when interpreting the results of chiral recognition experiments in micellar aggregates.
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Fig. 5 Aromatic region of the 1H NMR spectrum of an aqueous solution 4.0 mM in 2a and 40.0 mM in 1. |
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Fig. 6 Aromatic region of the 1H NMR spectrum of an aqueous solution 4.0 mM in 3a and 40.0 mM in 1. |
Because enantiopure biphenylic derivatives feature high molar ellipticities, even a small imbalance in the enantiomer equilibrium may be easily revealed by circular dichroism measurements. The CD spectra of the aqueous samples of 2a and 3a in chiral micellar aggregates did not show any band demonstrating the absence of any imbalance in the enantiomer equilibrium.
Considering the relatively high rotational barrier that was calculated for 3b, experimental evidence of an imbalance in the enantiomer equilibrium, even in the presence of a differential binding of the two enantiomers to the chiral micellar environment, was hardly expected. Therefore the absence of a band in the CD spectrum of the aggregate solutions containing 3a does not rule out the possibility that there is a differential binding. On the other hand, considering that 2b features a rotational barrier low enough to allow a very fast racemization , we could reasonably expect that, should the interactions with the aggregates favour the association of one enantiomer with the aggregate, the transfer of the chiral information from the aggregate to 2a could manifest itself as an imbalance of the enantiomer equilibrium. Thus, the absence of a deracemization phenomenon in the aqueous solution of 2a in chiral micellar aggregates, clearly indicates that there is no appreciable difference in the extent of binding of 2a enantiomers to the chiral aggregates.
The effect of the aromatic systems of 2a and 3a on the chemical shift of resonances due to 1 gives information on the binding site of the chirality probe. In Fig. 7 we report the comparison of the NMR spectrum of aqueous 0.10 M 1 in the absence of solute (Fig. 7a) and in the presence of 2a (Fig. 7b) and 3a (Fig. 7c), respectively. The chemical shift differences (expressed in Hz) observed between the spectra performed in the absence and in the presence of biphenylic derivative are reported in Table 4. All resonances relative to 1 protons are upfield shifted due to the association of the biphenylic derivatives with the aggregates; however inspection of Table 4 suggests that there are differences in the site of association of the two chirality probes, in fact in the case of 2a the signal relative to a head group proton (δZanti) features the highest chemical shift variation, demonstrating that this proton is in the shielding cone of the aromatic system. In the case of 3a the most shifted signals are those relative to the hydrophobic chain (Chain and 11-CH3), demonstrating a preferential site of binding of the aromatic system in this region.
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Fig. 7 1H NMR spectrum of (a) an aqueous solution 0.1 M in 1; (b) an aqueous solution 0.1 M in 1 in the presence of 2a; (c) an aqueous solution 0.1 M in 1 in the presence of 3a. |
α | δ Z anti | δ E syn | δ Z syn | 1-CH2 | 2-CH2 | Chain | 11-CH3 | |
---|---|---|---|---|---|---|---|---|
1 + 2a | 14 | 36 | 10 | 22 | 22 | 20 | 18 | 17 |
1 + 3a | 11 | 25 | 8 | 25 | 20 | 19 | 30 | 29 |
The finding of enantiodiscrimination in a hydrophobic site of binding supports our hypothesis3j that chiral recognition may occur in a chiral environment induced in an internal region of the aggregate by remote stereogenic centers. In fact, this result is in agreement with our previous observation of enantiodiscrimination of dipeptides in the hydrophobic region of aggregates formed by sodium N-dodecanoyl-L-prolinate.
1H NMR (CDCl3) ppm: 0.885 (3H, t, CH3, 3J = 6.8 Hz); 1.268 (18H, m); 1.616 (2H, m, CH2); 3.083 (2H, t, N–CH2, 3J = 7.0 Hz); 3.769 (3H, s, O–CH3); 6.209 (3H, m, 2, 4, 6); 7.065 (1H, t, 5, Jo = 8.1 Hz).
1H NMR (CDCl3) ppm: 0.915 (3H, t, CH3, 3J = 6.4 Hz); 1.220–1.420 (18H, m); 1.586 (2H, m, CH2); 2.932 (3H, s, N–CH3,); 3.300 (2H, t, N–CH2, 3J = 7.6 Hz); 3.811 (3H, s, O–CH3); 6.309 (3H, m, 2, 4, 6); 7.149 (1H, t, 5, Jo = 7.9 Hz).
1H NMR (CDCl3) ppm: 0.877 (3H, t, CH3, 3J = 6.3 Hz); 1.150–1.450 (18H, m); 1.556 (2H, m, CH2); 2.914 (3H, s, N–CH3,); 3.276 (2H, t, N–CH2, 3J = 7.3 Hz); 3.844 (3H, s, O–CH3); 6.094 (1H, dd, 4, Jo = 8.8 Hz, Jm = 2.5 Hz); 6.163 (1H, d, 6, Jm = 2.5 Hz); 7.466 (1H, d, 3, Jo = 8.8 Hz).
1H NMR (CDCl3) ppm: 0.870 (3H, t, CH3, 3J = 6.6 Hz); 1.198–1.444 (18H, m); 1.500–1.700 (2H, m, CH2); 2.955 (3H, s, N–CH3,); 3.305 (2H, t, N–CH2, 3J = 6.9 Hz); 3.641 (3H, s, O–CH3); 3.683 (3H, s, COOCH3); 6.176 (1H, d, 3′, Jm = 2.2 Hz); 6.274 (1H, dd, 5′, Jo = 8.4 Hz, Jm = 2.2 Hz); 7.426 (1H, t, 4, Jo = 8.1 Hz); 7.800–7.920 (2H, m, 3, 5).
13C NMR (CDCl3) ppm: 14.11; 22.67; 26.64; 27.14; 29.34; 29.47; 29.62; 29.65; 31.90; 38.82; 53.50; 55.08; 76.62; 77.04; 77.46; 96.21; 105.47; 112.28; 126.13; 127.08; 129.95; 132.39; 132.83; 134.94; 150.55; 151.13; 157.12; 171.57. Elemental analysis calculated for C27H38N2O5: C 68.91%, H 8.14%, N 5.95%; found: C 69.70%, H 8.71%, N 5.61%.
1H NMR (CD3OD) ppm: 0.861 (3H, t, CH3); 1.060–1.600 (20H, m); 3.636 (3H, s, N–CH3); 3.742 (3H, s, OCH3); 3.850 (3H, s, COOCH3); 4.036 (2H, m, CH2); 7.287 (1H, d, Jo = 8.5 Hz); 7.450–7.540 (2H, m); 7.743 (1H, t, Jo = 7.9 Hz); 8.100–8.190 (2H, m).
13C NMR (CD3OD) ppm: 14.40; 23.64; 24.31; 26.87; 29.53; 29.96; 30.25; 30.38; 30.53; 30.62; 53.01; 55.21; 55.29; 57.45; 70.64; 105.27; 114.01; 127.94; 128.78; 130.64; 131.36; 131.79; 134.68; 135.01; 146.93; 151.89; 159.45; 167.45; 211.69.
Elemental analysis calculated for C29H43BrN2O5: C 60.10%, H 7.48%, N 4.83%; found: C 60.38%, H 8.11%, N 4.47.
Footnote |
† 1 Because of line width enlargement, splitting of long range coupling that allows a definite assignment in organic solvents is lost in aggregating conditions. |
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