Vittoria
Ferrara
a,
Veronica
Iuliano
*a,
Placido
Neri
a,
Silvano
Geremia
b,
Neal
Hickey
b,
Luca
Di Stasio
a,
Giovanni
Vigliotta
*a,
Gaetana
Paolella
a,
Ivana
Caputo
a,
Paolo
Della Sala
a,
Carmine
Gaeta
a and
Carmen
Talotta
*a
aDipartimento di Chimica e Biologia “A. Zambelli”. Università di Salerno, Via Giovanni Paolo II, I-84084, Fisciano (Salerno), Italy. E-mail: ctalotta@unisa.it
bCentro di Eccellenza in Biocristallografia, Dipartimento di Scienze Chimiche e Farmaceutiche, Università di Trieste, Via L. Giorgieri 1, I-34127, Trieste, Italy
First published on 28th May 2024
Novel resorcin[4]arene-based octacationic quaternary ammonium compounds (ResQACR) were obtained by linking tetraalkylammonium groups on the macrocycle wider rim to give multivalent multi-QACs. Their structures were elucidated through 1D and 2D NMR experiments, HR-MS analysis, and crystallographic studies. Additionally, the conformational dynamics of these octacationic-resorcinarenes were investigated using 1H variable-temperature (VT) NMR experiments. The antimicrobial properties of ResQACR derivatives were studied by in vitro biological investigations. We identified that the ResQACbutyl derivative shows an impressive bacteriostatic activity against S. aureus. A remarkable multivalent effect was observed for this bacteriostatic activity. Interestingly, cytotoxic studies indicate that ResQACbutyl showed no adverse impact on cell viability of a human cell line, even at concentrations 30 times greater than the MIC for S. aureus and approximately 3 times higher than the MIC for E. coli. ResQACundecyl exhibits greater bacteriostatic activity against E. coli than against S. aureus, but it is cytotoxic at lower concentrations (IC50 of 12.1 μM) than its MIC. ResQACphenyl shows scarce bacteriostatic activity against both S. aureus and E. coli, while no multivalent effect was observed. This is likely attributed to the conformational rigidity of the boat C2v conformation of ResQACphenyl, which hinders optimal matching between the cationic chains and the negatively charged bacterial surface.
Among disinfectants, quaternary ammonium compounds (Fig. 1, QACs)2 are a well-known class of cationic biocides, boasting a wide spectrum of antimicrobial activity.3,4 QACs are commonly present in cleaning products, hand sanitizers, personal care products, various types of wipes, and diverse pesticidal products. They are frequently integrated into polymeric materials (poly-QAC in Fig. 1). Interestingly, QACs serve as antimicrobial treatments for biomedical instruments and high-touch surfaces in public areas.2–4 In addition, the use of QACs as antimicrobial agents has experienced a notable increase in response to the COVID-19 pandemic.5
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Fig. 1 Schematic representation of mono-QAC, bis-QAC, multi-QAC, and poly-QAC.3 A mono-QAC is constituted by a single tetraalkylammonium group. In the case of bis-QAC, multi-QAC, and poly-QAC, the segment connecting the charged nitrogen atoms (“head”) is named “spacer”. The alkyl chains extending from the head are called “tails”. |
Over recent decades, numerous studies have highlighted the role of macrocycles as useful scaffolds for obtaining antibacterial derivatives (spacer in Fig. 2).6–11 Interestingly, the synthetic versatility of pillararenes and calixarenes enabled the incorporation of multiple functionalities onto their rims.6–15
Thus, in 2016, Cohen and coworkers12 were able to obtain pillar[n]arenes decorated with 10 quaternary ammonium groups (five ammonium groups on each side of the macrocycle) which inhibited the formation of biofilms by two significant Gram-positive pathogens, Staphylococcus aureus and Enterococcus faecalis.
Consoli and colleagues13,14 focused on calixarene scaffolds, designing and synthesizing novel water-soluble polycationic calix[4]arenes. Subsequently, the authors demonstrated the ability of these novel calix[4]arene-multi-QACs to work as antibacterial agents against Gram-positive and Gram-negative bacteria, both independently and in combination with appropriate antibiotics. The same research group reported a calixarene featuring long alkyl chains at the lower rim, which exhibited micellar behavior.14 These micelles inhibited the formation of biofilms by Gram-negative bacteria.
In the literature, a few rare examples have been reported where macrocycle-based antibacterial agents exhibited increased antibacterial efficacy by exploiting the multivalent effect.15,16 Multivalency17–19 refers to the phenomenon where multiple receptor/ligand interactions occur simultaneously, leading to enhanced overall affinity and selectivity of binding. Natural systems extensively utilize multivalency, such as in immunoglobulin function, virus particle adhesion to target cells, and regulation of cell–cell interactions. This concept has acquired increasing attention in the literature,17–19 where multivalency was exploited in designing macrocyclic ligands20–22 targeting pathologically relevant enzymes.
Resorcin[4]arene23,24 (1a, Fig. 2) is a macrocycle bearing four resorcinol rings, and is obtained from resorcinol/aldehyde acid-catalysed condensation.23,24 This macrocycle possesses eight functionalizable OH groups, all positioned on one side of the macrocycle (wider rim, see Fig. 2). Thus, the resorcin[4]arene scaffold can be considered as an ideal candidate to design multivalent quaternary ammonium compounds (multi-QACs, Fig. 1 and 2), where the valence indicates the number of ammonium units (heads in Fig. 1 and 2) linked to the macrocycle. To the best of our knowledge, no examples of polycationic ammonium resorcinarene compounds have been reported in the literature to data.
Inspired by these considerations, this study focused on the synthesis of novel multi-QAC resorcin[4]arenes (denoted as ResQACR in Fig. 2), featuring eight cationic ammonium groups on the wider rim (Fig. 2). In addition, conformational dynamics of these novel octacationic resorcinarenes will be investigated.
Finally, the antimicrobial effects of ResQACR against Staphylococcus aureus and Escherichia coli will be evaluated, alongside an assessment of their cytotoxic properties.
![]() | ||
Scheme 1 Direct macrocyclization of resorcinols 4a,b bearing bromoalkane groups with aldehydes to obtain resorcin[4]arenes 5a–d as precursors for the synthesis of cationic resorcinarenes ResQACR. |
Single crystals of ResQACbutyl as an iodide salt, suitable for X-ray diffraction, were obtained by slow evaporation of a H2O/MeOH solution (Fig. 3). The X-ray structure of resorcinarene ResQACbutyl (Fig. 3) was determined using synchrotron radiation with cryogenic techniques. The structure of the macrocycle shows a boat conformation with a pseudo C2V symmetry (Fig. 3). The two opposite aryl rings, which define the sides of the boat, make almost orthogonal dihedral angles (Fig. 3d) with respect to the mean plane of the carbon bridging atoms (Fig. 3d). Angles less than 90° indicate that the aryl rings lean inwards towards the twofold axis of the molecule (Fig. 3c and d) and vice versa. In particular, one aryl ring of ResQACbutyl is slightly inward oriented, and the other is slightly outward oriented (Fig. 3c and d), defining two almost parallel inclined sides of the boat (3.8°). This observation of a more open conformation of ResQACbutyl than other resorcinarenes in the boat conformation26,27 is consistent with the presence of the electrostatic repulsion between the positively charged quaternary alkylammonium side chains. Close inspection of the 1H NMR spectrum of ResQACbutyl in CD3CN (Fig. 4a, 400 MHz, 298 K) clearly indicated that the macrocycle adopts, also in solution, a C2v-boat conformation, stable on the NMR time scale at 298 K (400 MHz). In fact, four +NCH3 singlets were detected at 3.25, 3.24, 3.04, and 3.01 ppm (“f and g” in Fig. 4), which correlated in the 2D HSQC spectrum with carbon signals between 52.0 and 52.2 ppm. Furthermore, in accordance with the C2v symmetry of ResQACbutyl, the aromatic region of its 1H NMR spectrum revealed the presence of four singlets at 7.35, 6.99, 6.69, and 6.15 ppm (“a and b” in Fig. 4), which are attributable to the aromatic protons.
![]() | ||
Fig. 3 (a and b) X-ray structure of ResQACbutyl (stick representation with van der Waals surfaces). (c) Simple stick representation of ResQACbutyl. Hydrogen atoms are omitted for clarity. (d) Dihedral angles (°) between the corresponding aryl planes (A–D in Fig. 3c) of the ResQACbutyl structure. |
In addition, the 1H NMR spectrum of ResQACbutyl at 298 K showed the presence of two sets of OCH2CH2N+ diastereotopic resonances between 3.0 and 5.0 ppm (c,c′ and d,d′ in Fig. 4). Subsequently, the conformational dynamics of ResQACbutyl was studied by 1H VT NMR.27,28 At room temperature, this macrocycle is frozen in the C2V boat conformation (Fig. 4c and d).
Upon heating, a broadening was observed for the aromatic signals “a,b” and the diastereotopic aliphatic “c,d” resonances (Fig. 4c and d), while their coalescence was observed at 373 K. This coalescence (Fig. 4d) clearly indicates conformational mobility of the C2V boat conformation of ResQACbutyl due to a boat(C2V)–crown(C4V)–boat(C2V) conformational interconversion (Fig. 4c),21,27 which becomes fast on the NMR time scale at 393 K (a ΔG‡ value of 17.3 kcal mol−1 was calculated for this process, see the ESI†). In fact, at 393 K, the 1H NMR spectrum of ResQACbutyl becomes simpler (Fig. 4d) and more compatible with an averaged crown-like structure with C4v symmetry. In a similar way, the 1H NMR spectrum at 298 K of ResQACundecyl reveals a stable boat C2v conformation (with respect to the NMR time scale), while on heating, a broadening of its NMR signals was observed. Therefore, a boat–crown–boat conformational interconversion (Fig. 4c) occurs within the NMR time scale at higher temperature. A coalescence of NMR signals of ResQACundecyl was observed at 373 K, while at 393 K the 1H NMR spectrum agreed with an averaged crown C4V conformation. From these data, an energy barrier value of 17.2 kcal mol−1 was calculated for the boat–crown–boat conformational interconversion of ResQACundecyl, a value very similar to that found for ResQACbutyl.
With these results in hand, we have investigated the conformational dynamics of ResQACphenyl. In this case, the boat conformation is blocked on the NMR time scale. In fact, on heating, the NMR signals of ResQACphenyl didn't show any evidence of broadening in the temperature range investigated (298–393 K, ESI†).
These results clearly indicate that the presence of phenyl groups at the methine bridges of ResQACphenyl increases the energy barrier to the boat–crown–boat conformational process with respect to the linear aliphatic chains (undecyl and butyl).
Valencya (n) | Staphylococcus aureus | Escherichia coli JM109 | |||||
---|---|---|---|---|---|---|---|
MICb,c μM (μg mL−1) | r.p. | MLDd μM (μg mL−1) | MICb,c μM (μg mL−1) | r.p. | MLDd μM (μg mL−1) | ||
a n = number of ammonium units. b MIC (minimum inhibitory concentration). c r.p. = relative potency = MIC (derivative 2)/MIC (ResQACR). d MLD (minimum lethal dose). e R = resistance to the derivative. | |||||||
ResQACbutyl | 8 | 0.89 (2) | 182 | >13 (>30) | ≈13 (≈30) | 4.6 | >125 (>280) |
ResQACundecyl | 8 | 26 (70) | 6.1 | ≈53 (≈140) | ≈6.5 (≈17) | 9.4 | ≈107 (≈280) |
ResQACphenyl | 8 | ≈43 (≈100) | 3.8 | >60 (>140) | ≈43 (≈100) | 1.4 | >121 (>280) |
1b | 0 | R > 187 (>280) | — | >187 (>280) | R > 187 (>280) | — | >187 (>280) |
2 | 2 | 163 (80) | 1 | ≈185 (≈140) | ≈61 (≈30) | 1 | ≈143 (≈70) |
3 | 1 | R > 954 (>280) | — | >954 (>280) | ≈635 (≈140) | — | >954 (>280) |
All ResQACR compounds were tested as nitrate salts to avoid bromide and iodide counter-anions, thereby enhancing the safety of these compounds for both humans and the environment. In fact, recent reports29–31 indicate that iodide and bromide salts of QACs typically threaten water sources with pollution. During disinfection, they can produce harmful by-products such as brominated disinfection by-products (Br-DBPs) and iodinated disinfection by-products (I-DBPs), which pose significant health risks.29–31 All ResQACR compounds showed antimicrobial activity against both microbial strains, but ResQACbutyl and ResQACundecyl were more effective, presenting lower MIC and MLD values (Table 1). The toxic activity was variable with respect to the bacterial group. ResQACbutyl showed high bacteriostatic and bactericidal activity with very low MIC and MLD (0.89 and >13 μM, respectively) for the Gram-positive strain; on the other hand, ResQACundecyl was more bacteriostatic against E. coli than against S. aureus, but more bactericidal for the latter (lower MLD values). The less efficient ResQACphenyl showed similar bacteriostatic activity for the two bacteria (MIC = 43 μM), but a variable bactericidal effect. As reported in Table 1, resorcinarene 1b (Fig. 2) bearing eight neutral heptyl groups on the wider rim didn't show any bacteriostatic or bactericidal effects for the doses tested. With the aim of quantifying the multivalent effect, we chose the resorcinol diammonium derivative 2 and the dibutyl–dimethylammonium derivative 3 shown in Fig. 2 as the reference divalent and monovalent compounds, respectively. The monovalent derivative 3 exhibited very low activity against both E. coli and S. aureus (MIC = 635 and >954 μM, respectively, Table 1). The resorcinol diammonium derivative 2, which mimics a single monomeric unit of the multivalent ResQACR macrocycles, showed bacteriostatic activity, MIC = 163 and 61 μM, for S. aureus and E. coli, respectively (Table 1), which was significantly lower than that found for the ResQACbutyl compound (0.89 and 13 μM).
Thus, the relative antimicrobial potencies (r.p. in Table 1) of ResQACR derivatives were obtained by calculating the ratio of the MIC values (μM) of the resorcinol diammonium 2 to that of the multivalent ResQACR.32 In detail, a remarkable multivalent effect with an r.p. of 182 was observed for the ResQACbutyl derivative (MIC = 0.89 μM) against S. aureus. According to this finding, each resorcinol diammonium monomer in ResQACbutyl experiences an antimicrobial potency amplification of 45.5 times compared to the reference 2 (Fig. 5a and b). The data reported in Table 1 clearly show that S. aureus is more responsive to tetraalkylammonium multimerization than E. coli. In fact, multivalent ResQACR derivatives showed low r.p. values ranging from 1.4 to 9.4 against E. coli. Remarkably, the ResQACundecyl derivative demonstrated lower bacteriostatic activity against S. aureus (MIC = 26 μM) than ResQACbutyl and exhibited six times greater efficiency than derivative 2 (r. p. = 6.1). Interestingly, ResQACphenyl showed a modest bacteriostatic activity towards both S. aureus and E. coli and very low multivalent effects (r.p. = 1.4 and 3.8). Thus, by close inspection of the data reported in Table 1, we can conclude that:
(a) the antibacterial activity of ResQACR derivatives is attributable to the interaction with the bacterial cell wall (Fig. 5a–c). As is known33–37 for other quaternary ammonium compounds and polycationic macrocycle derivatives, ResQACR also can bind with the negatively charged bacterial surface by electrostatic and hydrophobic interactions (Fig. 5). Differently, no significant biocidal effect of compound 1b was observed against both E. coli and S. aureus.
(b) A significant bacteriostatic activity was observed for the ResQACbutyl derivative (MIC = 0.89 μM) against S. aureus. In addition, ResQACbutyl shows a remarkable multivalent effect against S. aureus.
(c) E. coli is more responsive to ResQACundecyl.
(d) As demonstrated previously by some of the authors,20,21 the effectiveness of resorcinarene-based multivalent ligands relies on achieving a delicate balance between the preorganization of the macrocycle and its conformational flexibility.38 In fact, the effectiveness of multi-QACs against bacteria relies on their ability to align all their ammonium groups with the negatively charged bacterial surface (Fig. 5). ResQACbutyl and ResQACundecyl derivatives exhibit conformational adaptability, allowing them to fit and interact optimally with the bacterial surface (Fig. 5b). In contrast, the ResQACphenyl derivative features a rigid boat-shaped structure, with four alkylammonium groups positioned away from the surface (Fig. 5c) and four cationic groups facing towards it. Consequently, the decreased activity of ResQACphenyl is likely due to its weaker interaction with the bacterial wall, as it utilizes only four of its available eight cationic groups (Fig. 5c).38
Residual cell viability at 100 (μM) | IC50 (μM) | |
---|---|---|
ResQACbutyl | 4.1% | 54.3 |
ResQACundecyl | 4.7% | 12.1 |
ResQACphenyl | 49.8% | 99.8 |
1b | 99.4% | >300 |
2 | 45.3% | 97.2 |
3 | 100% | >1 mM |
Finally, viability assays clearly indicated that ResQACundecyl was cytotoxic at concentrations (IC50 = 12.1 μM) lower than its MIC for S. aureus, while ResQACphenyl had a moderate ability to reduce cell viability (IC50 = 99.8 μM), whereas compounds 1b and 3 had no effect on the viability of HaCat cells.
In the solid state, ResQACbutyl adopts a boat conformation with a pseudo C2V symmetry (Fig. 3) to minimize the electrostatic repulsion between the positively charged quaternary alkylammonium side chains. For the first time, the conformational dynamics properties of resorcin[4]arenes bearing cationic groups on the wider rim have been investigated. Dynamic NMR investigations indicate that cationic chains do not inhibit the boat-to-crown conformational process, whereas the groups on the CH-bridges play a crucial role in this process. In fact, ResQACbutyl and ResQACundecyl derivatives exhibit a boat–crown–boat conformational interconversion. Conversely, for the ResQACphenyl derivative, conformational boat-to-crown interconversion is blocked within the NMR time scale.
Biological studies unequivocally underscore the antibacterial abilities of ResQACbutyl and ResQACundecyl derivatives. ResQACbutyl demonstrates a notable bacteriostatic activity against S. aureus with a remarkable multivalent effect. Interestingly, studies on the viability of HaCat cells indicate that ResQACbutyl exhibits no detrimental effect on cell viability, even at a concentration higher than the MIC for S. aureus and E. coli. ResQACphenyl show a modest bacteriostatic activity against both S. aureus and E. coli. Probably, this is due to the conformational rigidity of the resorcinarene framework in ResQACphenyl, which does not facilitate optimal matching between the ammonium groups and the negatively charged bacterial surface. These results corroborate21 the significance of the conformational flexibility of macrocyclic scaffolds in relation to their interaction with biological targets.21
Footnote |
† Electronic supplementary information (ESI) available. CCDC 2336815. For ESI and crystallographic data in CIF or other electronic format see DOI: https://doi.org/10.1039/d4qo00728j |
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