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Matrix-isolation IR spectra of halogen–P and halogen–π complexes of phosphines and iodotrifluoroethylene (C2F3I)

Malte Feßner, Elliot J. Tay, Corentin Grassin, Sven Reese and Christian Merten*
Ruhr-Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801 Bochum, Germany. E-mail: christian.merten@ruhr-uni-bochum.de; Web: https://www.mertenlab.de

Received 2nd September 2025 , Accepted 26th September 2025

First published on 29th September 2025


Abstract

The C[double bond, length as m-dash]C stretching mode of iodotrifluoroethylene (ITFE) serves as a marker for halogen-bonding (XB) interactions in complexes with phosphines. The formation of C–I⋯P XB-complexes becomes evident from a strong red-shift of this marker band. The formation of C–I⋯π bound clusters, which were kinetically trapped in the cryogenic environment, was confirmed by a slightly smaller red-shift of the marker band.


In its most general definition, a halogen bonding (XB) interaction1–4 results from a net attraction between an electrophilic region of a halogen atom and a nucleophilic region in either the same or another molecule. In practice, halogen bonding donors are dihalogen compounds or haloorganics, and halogen bonding acceptors are entities that would also act as hydrogen bonding acceptors. The high directionality of XB interactions finds application in various fields, ranging from crystal engineering to catalysis5,6 and supramolecular chemistry.7–10 Among the most utilized structural motifs are C–X bonds (with X = Br, I) interacting with the nitrogen atoms of amines or the oxygens in carbonyl or ether groups. Halides,11,12 selenium,13,14 and sulfur15 are also known to form halogen bonds.16–20 Interestingly, although phosphines could also engage in XB interactions, examples in the literature are scarce. This lack of examples is due to the fact that the strongly polarizing phosphorus tends to abstract the halogen atom from the XB-donor,21 resulting in the formation of a covalent P–X bond. Most C–X⋯P halogen bonds reported in the literature are thus reported in the solid state and investigated by means of X-ray crystallography or solid-state NMR spectroscopy.16,22–24 Solely for the complex formed between triphenylphosphine and 1,3,5-trifluoro-2,4,6-triiodobenzene, not only the solid state but also a solution-phase identification based on 31P-NMR was reported.22

The infrared (IR) spectroscopic characterization of such weakly bound C–X⋯P complexes in the solution phase is hampered not only because of the potential reactivity of the mixture, but also because they may compete with solute–solvent interactions. Furthermore, band shifts associated with the complexes may be very small, so that the spectra would only slightly differ from those of the single components. Consequently, the broad bands of the solution phase measurements simply prevent their identification. The technique of matrix isolation (MI) is well-established for the characterization of conformational equilibria and intermolecular interactions as well as for studies on reactive intermediates. It involves the separation of target compounds and complexes in solid inert gas matrices, which are obtained by spraying mixtures of the components and an inert gas onto a spectroscopic window. The window is held at a temperature markedly below the melting point of the host gas (typically ∼15–20 K), so that the arriving species are immediately frozen out. If the solid matrix is subsequently slightly warmed (annealing), small guest molecules can diffuse through the matrix and form clusters. As the rigid environment prevents any large amplitude structural rearrangements of larger guest molecules, the diffusion process may not only yield the thermodynamically most favourable complexes. In fact, high-energy structures may become kinetically trapped.

Using matrix isolation and other cryogenic sampling techniques, the C[double bond, length as m-dash]C stretching vibration of iodotrifluoroethylene (ITFE) has been identified as a particularly sensitive probe for XB interactions. As shown by Herrebout et al. in cryosolution experiments, i.e., when using liquefied rare gases as solvents,25,26 XB interactions of ITFE with amines lead to a strong shift of 10–15 cm−1. For ferrocene and N,N-dimethyl ferrocenyl amine, we recently reported that ITFE also interacts with the π-faces of cyclopentadienyl giving C–I⋯π bound clusters under MI conditions.27 Our detailed MI-IR study on ITFE itself revealed the presence of a particularly stable matrix site in argon, which persists when the matrix is annealed.28 We subsequently identified para-hydrogen as an ideal environment to study complexes of ITFE, as no self-aggregation was observable under typical deposition conditions.28 Notably, we also demonstrated that strong contributions of combination modes and overtones complicate the analysis of the spectral regions around the other fundamental modes of ITFE.

It was envisioned that ITFE could be the ideal probe to also characterize neutral XB interactions with phosphines. For the present study, we thus recorded the MI-IR spectra of ITFE co-deposited with tricyclohexyl phosphine (PCy3), triphenyl phosphine (TPP), tris(o-methoxy phenyl)phosphine (ToMPP), and tris(2,4,6-trimethoxy phenyl)phosphine (TTMPP). In addition to the C[double bond, length as m-dash]C stretching band of monomeric ITFE, which is observed at 1761.3 cm−1 (▼, Fig. 1) in the pH2 matrix, the spectra of all four investigated systems showed additional bands in the C[double bond, length as m-dash]C stretching regions indicative of complex formation during the deposition process. For three systems, a strongly red-shifted band (●) was observed (1744.6 cm−1 for PCy3, 1746.1 cm−1 for ToMPP, 1749.8 cm−1 for TPP), which was apparently absent in the spectrum of TTMPP. Another sharp band (◊) was found at 1757.6 for TPP and ToMPP, and at 1756.7 cm−1 for TTMPP, respectively. In the same range, there is only a shoulder to the monomeric ITFE band visible near 1759 cm−1 for ITFE-PCy3. In the remaining fingerprint region, new bands could also be observed near some of the other strong fundamental modes of ITFE (cf. Fig. S1). Most notably, very characteristic new bands occurred around the in-phase C–F stretching mode of ITFE (νCF2,ip, 1004.5 cm−1). In all four spectra, a new band at ∼1002.3 cm−1 likely corresponds to the same species as the weakly shifted C[double bond, length as m-dash]C stretching modes (◊). Further red-shifted bands occurred at 993.1 cm−1 for ITFE-PCy3 and 994.4 cm−1 for ITFE-ToMPP. There is likely also a band present at ∼997 cm−1 in the spectrum of ITFE-TPP, yet this range is overlapped with a band of TPP itself. For TTMPP, however, a similar band is clearly absent. The observed strongly shifted bands of νCF2,ip follow the same trend as the strongly shifted C[double bond, length as m-dash]C stretching bands (●), suggesting that these bands belong to the same species. It is further noteworthy, that no changes in the bands of the phosphines were observed as the XB-acceptors were deposited in large excess. Generally, the same trend can be observed in the Ar-matrix after deposition (cf. Fig. S2) and annealing of the Ar-matrices further intensified the complex bands.


image file: d5cc05078b-f1.tif
Fig. 1 Experimental spectra of ITFE co-deposited with PCy3, TPP, ToMPP and TTMPP in a para-hydrogen matrix at 4 K in the range of the C[double bond, length as m-dash]C stretching band of ITFE. The spectra are normalized to the band of monomeric ITFE (▼). Bands arising from the complexes of the phosphines with ITFE are marked (●) and (◊). The full fingerprint range is presented in the SI.

For the computational analysis of ITFE-PCy3, three types of intermolecular interactions were considered (Fig. 2). The C–I⋯P XB interaction was found to be the most preferred at the utilized levels of theory, i.e., at the B3LYP-d3bj29 and revDSD-PBEP86-d3bj30 levels with the def2TZVP basis. More than 3.5 kcal mol−1 less favourable is the second complex structure, which is best described as cooperative P⋯π/C–H⋯F interactions. Another 1.6–1.8 kcal mol−1 higher in energy is the third structure obtained for ITFE-PCy3, which is stabilized by C–H⋯π interactions between a cyclohexyl ring and the ITFE molecule located above the ring. A structure with C–H⋯I interaction could not be obtained. Based on the computed harmonic IR spectra of these three structures, the strongly shifted band at 1744.6 cm−1 (●) could unambiguously be assigned to the C–I⋯P XB-complex (Δνexp = 16.7 cm−1; ΔνB3LYP = 18.6 cm−1; ΔνrevDSD = 14.1 cm−1). The calculations further suggested that the C–H⋯π interactions cause a very small red-shift of the C[double bond, length as m-dash]C stretching band (Δνexp = ∼2 cm−1; ΔνB3LYP = 0.3 cm−1; ΔνrevDSD = 0.5 cm−1), while the π–P/C–H⋯F interactions result in a blue-shift. Consistent also with the predicted shifts of the other fundamental modes of ITFE (cf. Fig. S3), the experimentally observed shoulder (◊) in the PCy3-ITFE spectrum was thus assigned to a kinetically trapped C–H⋯π complex and it was concluded that the π⋯P/C–H⋯F complex is not formed under MI conditions.


image file: d5cc05078b-f2.tif
Fig. 2 Comparison of the computed IR spectra with the experimental spectra of ITFE and its complexes with PCy3 (left) and TPP (right) recorded in the pH2 matrix at 4 K. The analytically relevant section around the C[double bond, length as m-dash]C stretching mode of ITFE is shown, as the remaining fingerprint region is of little diagnostic value. The figure also shows representative complex structures of PCy3-ITFE (top) and TPP-ITFE (bottom), with bond lengths and relative ΔEZPC obtained at the revDSD-PBEP86-d3bj/def2TZVP level. The grey spectra in the figure of TPP-ITFE correspond to other π⋯π structures.

In the screening for complex structures of TPP-ITFE, we also found three general binding motifs. In addition to the C–I⋯P XB-structure, ITFE can interact with the π-faces of the aryl rings forming either C–I⋯π or π⋯π complexes (Fig. 2, bottom). The C–I⋯P complex was again found to be the lowest energy structure, followed by several π⋯π structures (ΔEB3LYP = 1.1–1.7 kcal mol−1, ΔErevDSD = 0.4–0.7 kcal mol−1, cf. Table S1) and the C–I⋯π complex (ΔEB3LYP = 2.0 kcal mol−1, ΔErevDSD = 1.2 kcal mol−1). The computed vibrational spectra allowed for the unambiguous analysis of the experimental IR spectra of TPP-ITFE. The C[double bond, length as m-dash]C stretching band in the C–I⋯P XB-complex again showed the largest shift (cf. Fig. 2), which well-matched in magnitude with the experimentally observed values (Δνexp = 11.8 cm−1; ΔνB3LYP = 13.8 cm−1; ΔνrevDSD = 9.6 cm−1). Likewise, the strong band at 1749.8 cm−1 (◊) could directly be assigned to the C–I⋯π complex (Δνexp = 3.7 cm−1; ΔνB3LYP = 3.8 cm−1; ΔνrevDSD = 2.3 cm−1), as the π⋯π complexes are expected to be much closer to the ITFE monomer band. Again, the assignments were also consistent with the observed shifts in the spectral regions of the other fundamental modes of ITFE (cf. Fig. S4).

For the analysis of ToMPP-ITFE and TTMPP-ITFE, we focused on spectral calculations at the B3LYP-d3bj level of theory, as the increasing molecular size of the complexes made calculations at revDSD-PBEP86-d3bj not feasible anymore. In its lowest energy conformation, the three methoxy groups of ToMPP are oriented in the same direction, i.e., pointing towards the lone pair of the central phosphorus.31 Under solution phase conditions, a coordination to the lone pair typically leads to the rotation of one aryl unit to decrease steric repulsion (see crystal structures of ToMPP-BH332 or RhCl(ToMPP)(1,5-cyclo-octadiene)33 for examples). Under matrix isolation conditions, however, such a large amplitude motion required for this conformational change cannot take place. Hence, for the generation of ToMPP-ITFE structures, we assumed that the complex formation takes place solely with the lowest energy structure. Expectedly, the analysis of the IR spectrum of ToMPP-ITFE subsequently led to a very similar conclusion to that of TPP-ITFE, and it showed that C–I⋯P and C–I⋯π structures are present in the matrix (cf. Table S2 and Fig. S5).

Initially following the same approach as that of ToMPP, we computed TTMPP-ITFE complexes based on the crystal structure conformation.34,35 Due to the steric crowding with two ortho-methoxy groups, TTMPP cannot adopt a symmetric propeller conformation with the three aryl rings being tilted in the same direction. Instead, one of the aryl rings arranges almost in plane with the lone pair of phosphorus. In a second low-energy structure of TTMPP, a methoxy group on the non-tilted aryl ring is rotated towards the phosphorus, which increases the steric shielding of the lone pair but lowers the zero-point corrected energy by about 0.2 kcal mol−1 (cf. Fig. 3 and Fig. S3). For both conformers of TTMPP, the C–I⋯P XB-complexes were found to be the most favourable complexes with ITFE. The shielding of the phosphorus with the methoxy group, however, introduced a drastic energy difference between the two C–I⋯P XB-complexes of 1.25 kcal mol−1, clearly favouring the complex of the crystal structure-like conformer of TTMPP (cf. Fig. S6 for electrostatic potential maps). Notably, interactions with the methoxy oxygen atoms are significantly less favoured than those with the phosphorus. Expectedly, the characteristic, strongly red-shifted band of the C[double bond, length as m-dash]C stretching mode was predicted for both complexes, yet it is absent in the experiment. The C[double bond, length as m-dash]C stretching bands of ITFE in the C–I⋯π structures coincided with those of the C–I⋯O complexes, which could both well explain the band at 1756.7 cm−1 (◊). The π⋯π complexes could explain the small features seen at the high-energy side of the C[double bond, length as m-dash]C stretching band of ITFE.


image file: d5cc05078b-f3.tif
Fig. 3 Comparison of the computed spectra of ITFE-TTMPP complexes with the experimental spectra recorded in the para-hydrogen matrix at 4 K in the range of the C[double bond, length as m-dash]C stretching band of ITFE. The dotted spectra correspond to structures of the second TTMPP conformation with the methoxy group rotated towards the phosphorus lone pair (cf. Table S3). The grey spectra in the figure correspond to π⋯π structures.

From the computational analysis of the spectra, there is no apparent reason for the C–I⋯P XB-complexes being formed under matrix isolation only with PCy3, TPP and ToMPP, but not with TTMPP. It confirmed the presence of higher energy complexes for all four phosphines, which are kinetically trapped and cannot rearrange towards the thermodynamically most preferred structures (i.e., the C–I⋯P complexes). Notably, a comparison of the relative intensities of the diagnostic C[double bond, length as m-dash]C stretching bands (● and ◊) suggested that the higher energy C–H⋯π and C–I⋯π states were the predominant species in the matrix. As the complex formation process under matrix isolation conditions is determined by diffusion processes within the deposited matrix, a mechanistic explanation for the lack of the C–I⋯P complex could be formulated. For the complex to form, ITFE must approach the phosphine at a suitable angle and ideally with the iodine first, and ITFE must have sufficient space around the phosphorus lone pair for it to move into a linear arrangement. With TTMPP being the sterically most demanding of the investigated phosphines based on the Tolman cone angles,36 the chances for an encounter under these conditions are likely to be very limited. Instead, approaching ITFE molecules face the very attractive π-faces or slightly less preferable oxygen sites of the methoxy groups first and become kinetically trapped in the higher energy π⋯π, C–I⋯π or C–I⋯O states (cf. Fig. S6 for electrostatic potentials). For PCy3, TPP and ToMPP, the lone pairs are more exposed to the matrix environment and the approach is not shielded by methoxy groups. Consequently, as the lone pair represents also the most electronegative site for PCy3 and TTP, the statistical chance for the C–I⋯P XB-complex under MI conditions is notably increased.

The matrix isolation spectra presented in this study allow the key conclusion that phosphines can engage in C–I⋯P halogen bonding interactions. They do not allow the converse conclusion, i.e., that TTMPP cannot form XB interaction through the phosphorus at all. Steric effects are likely to play a role in the complex formation process under matrix isolation conditions. Finally, it is interesting to note that there appears to be a certain correlation of the computed C–I⋯P bond distances in the ITFE-complexes of PCy3, TPP and ToMPP with the frequency of the ITFE C[double bond, length as m-dash]C stretching bands. Shorter distances lead to a stronger shift (cf. Table 1). However, when also considering the computed values for TTMPP-ITFE, it is not only the distance, but also secondary stabilizing interactions (cf. Fig. S7) that contribute to the shift of the C[double bond, length as m-dash]C stretching band. Whether or not the position of the C[double bond, length as m-dash]C stretching band has analytical value to compare XB interactions among different complexes needs to be explored in further detail in future studies.

Table 1 Comparison of the experimental band shift of the C[double bond, length as m-dash]C stretching vibration (Δνexp, cm−1) with computed shifts (Δνcalc, cm−1), C–I⋯P bond distances (dC–I⋯P, Å) and interaction energy (ΔEint = EZPC,complexEZPC,phosphineEZPC,ITFE; kcal mol−1)
  Δνexp Δνcalc B3LYP-d3bj revDSD-PBEp86-d3bj
dC–I⋯P ΔEint Δνcalc dC–I⋯P
PCy3-ITFE 16.7 18.6 3.11 −11.0 14.1 3.16
ToMPP-ITFE 15.2 17.4 3.14 −12.2
TPP-ITFE 11.8 13.8 3.18 −8.4 9.6 3.24
TTMPP-ITFE 21.3 3.11 −15.6


We conclude this study by acknowledging financial support by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy (EXC-2033, project no. 390677874), through the Research Training Group “Confinement Controlled Chemistry” (GRK 2376, project no. 331085229) and a research project (ME 4267/6-1, project no. 418662566). Further financial support was provided by the Mercator Research Center Ruhr (MERCUR, Pr-2017-0018).

Conflicts of interest

There are no conflicts to declare.

Data availability

The data supporting this article have been included as part of the supplementary information (SI). Supplementary information: experimental and computational details, additional experimental and computed spectra, energies, electrostatic potential maps, NCI analysis. See DOI: https://doi.org/10.1039/d5cc05078b.

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