Soil-on-a-Chip: microfluidic platforms for environmental organismal studies

Claire E. Stanley, Guido Grossmann, Xavier Casadevall i Solvas and Andrew J. deMello

Lab Chip, 2016, 16, 228
DOI: 10.1039/C5LC01285F

Microfluidic bioanalytical flow cells for biofilm studies: a review

Mohammad Pousti, Mir Pouyan Zarabadi, Mehran Abbaszadeh Amirdehi, François Paquet-Mercier and Jesse Greener

Analyst, 2019, 144, 68
DOI: 10.1039/C8AN01526K

A microfluidic platform with pH imaging for chemical and hydrodynamic stimulation of intact oral biofilms

M. Parvinzadeh Gashti, J. Asselin, J. Barbeau, D. Boudreau and J. Greener

Lab Chip, 2016, 16, 1412
DOI: 10.1039/C5LC01540E

SpectIR-fluidics: completely customizable microfluidic cartridges for high sensitivity on-chip infrared spectroscopy with point-of-application studies on bacterial biofilms

Nan Jia, Arthur Daignault-Bouchard, Tianyang Deng, Thomas G. Mayerhöfer, André Bégin-Drolet and Jesse Greener

Lab Chip, 2023, 23, 3561
DOI: 10.1039/D3LC00388D

Microfluidic flow confinement to avoid chemotaxis-based upstream growth in a biofilm flow cell reactor

Farnaz Asayesh, Mir Pouyan Zarabadi, Nahid Babaei Aznaveh and Jesse Greener

Anal. Methods, 2018, 10, 4579
DOI: 10.1039/C8AY01513A

Grow with the flow – observing the formation of rheotactically patterned bacterial cellulose networks

Moritz Klotz, Dardan Bajrami and Daniel Van Opdenbosch

Mater. Adv., 2022, 3, 6191
DOI: 10.1039/D2MA00115B

Microfluidics for Protein Biophysics

Jérôme Charmet, Paolo Arosio and Tuomas P.J. Knowles

Journal of Molecular Biology, 2018, 430, 565
DOI: 10.1016/j.jmb.2017.12.015

In situ visualization of biofilm formation in a microchannel for a microfluidic microbial fuel cell anode

Dingding Ye, Pengqing Zhang, Jun Li, Xun Zhu, Rong Chen and Qiang Liao

International Journal of Hydrogen Energy, 2021, 46, 14651
DOI: 10.1016/j.ijhydene.2020.08.170

Hydrodynamic Effects on Biofilms at the Biointerface Using a Microfluidic Electrochemical Cell: Case Study of Pseudomonas sp.

Mir Pouyan Zarabadi, François Paquet-Mercier, Steve J. Charette and Jesse Greener

Langmuir, 2017, 33, 2041
DOI: 10.1021/acs.langmuir.6b03889

A new look at bubbles during biofilm inoculation reveals pronounced effects on growth and patterning

Farnaz Asayesh, Mir Pouyan Zarabadi and Jesse Greener

Biomicrofluidics, 2017, 11
DOI: 10.1063/1.5005932

Dynamic Sessile‐Droplet Habitats for Controllable Cultivation of Bacterial Biofilm

Zengjun Jin, Mengyue Nie, Ran Hu, Tianhu Zhao, Jingyue Xu, Dongwei Chen, Juanli Yun, Luyan Z. Ma and Wenbin Du

Small, 2018, 14
DOI: 10.1002/smll.201800658

A study on the dynamics of bacterial growth using biocompatible 3D-printed microfluidic device

Amlan Ashish, Poulomi Biswas, Brateen Datta, Chiranjeevi Kanike, Arnab Atta and Gorachand Dutta

Chemical Engineering Journal, 2024, 493, 152687
DOI: 10.1016/j.cej.2024.152687

Altered biofilm formation at plasma bonded surfaces in microchannels studied by attenuated total reflection infrared spectroscopy

Mohammad Pousti and Jesse Greener

Surface Science, 2018, 676, 56
DOI: 10.1016/j.susc.2018.01.004

A microfluidic gradient mixer‐flow chamber as a new tool to study biofilm development under defined solute gradients

Yingdan Zhang, Cheng Li, Yichao Wu, Yilei Zhang, Zhi Zhou and Bin Cao

Biotech & Bioengineering, 2019, 116, 54
DOI: 10.1002/bit.26852

A video imaging method for time-dependent measurements of molecular mass transfer and biofilm dynamics in microchannels

M. Parvinzadeh Gashti, M. Zarabadi and J. Greener

MRS Advances, 2016, 1, 2099
DOI: 10.1557/adv.2016.359

Microchemical Pen: An Open Microreactor for Region‐Selective Surface Modification

Sifeng Mao, Chiho Sato, Yuma Suzuki, Jianmin Yang, Hulie Zeng, Hizuru Nakajima, Ming Yang, Jin‐Ming Lin and Katsumi Uchiyama

ChemPhysChem, 2016, 17, 3155
DOI: 10.1002/cphc.201600857

Linear Scanning ATR-FTIR for Chemical Mapping and High-Throughput Studies of Pseudomonas sp. Biofilms in Microfluidic Channels

Mohammad Pousti, Maxime Joly, Patrice Roberge, Mehran Abbaszadeh Amirdehi, Andre Bégin-Drolet and Jesse Greener

Anal. Chem., 2018, 90, 14475
DOI: 10.1021/acs.analchem.8b04279

A surface spectroscopy study of a Pseudomonas fluorescens biofilm in the presence of an immobilized air bubble

M. Pousti, T. Lefèvre, M. Abbaszadeh Amirdehi and J. Greener

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2019, 222, 117163
DOI: 10.1016/j.saa.2019.117163

Bioprinting Living Biofilms through Optogenetic Manipulation

Yajia Huang, Aiguo Xia, Guang Yang and Fan Jin

ACS Synth. Biol., 2018, 7, 1195
DOI: 10.1021/acssynbio.8b00003

Convection‐Diffusion Layer in an “Open Space” for Local Surface Treatment and Microfabrication using a Four‐Aperture Microchemical Pen

Sifeng Mao, Yong Zhang, Weifei Zhang, Hulie Zeng, Hizuru Nakajima, Jin‐Ming Lin and Katsumi Uchiyama

ChemPhysChem, 2017, 18, 2357
DOI: 10.1002/cphc.201700577

A microfluidic platform for in situ investigation of biofilm formation and its treatment under controlled conditions

Hervé Straub, Leo Eberl, Manfred Zinn, René M. Rossi, Katharina Maniura-Weber and Qun Ren

J Nanobiotechnol, 2020, 18
DOI: 10.1186/s12951-020-00724-0

Critical shear stresses of Pseudomonas aeruginosa biofilms from dental unit waterlines studied using microfluidics and additional magnesium ions

Jesse Greener, William Y. Harvey, Cynthia Gagné-Thivierge, Sepideh Fakhari, Seyed Mohammad Taghavi, Jean Barbeau and Steve J. Charette

Physics of Fluids, 2022, 34
DOI: 10.1063/5.0076737

A Microfluidic Design for Quantitative Measurements of Shear Stress-Dependent Adhesion and Motion of Dictyostelium discoideum Cells

Sepideh Fakhari, Clémence Belleannée, Steve J. Charrette and Jesse Greener

Biomimetics, 2024, 9, 657
DOI: 10.3390/biomimetics9110657