Hicham Ben El Ayouchiaa,
Lahoucine Bahsisa,
Hafid Anane*a,
Luis R. Domingob and
Salah-Eddine Stiriba*ac
aLaboratoire de Chimie Analytique et Moléculaire, LCAM, Faculté Polydisciplinaire de Safi, Université Cadi Ayyad, Safi 46030, Morocco. E-mail: ananehafid@gmail.com; Tel: +212-5-24669517
bDepartamento de Química Orgánica, Universidad de Valencia, Avda. Dr Moliner 50, 46100 Burjassot, Valencia, Spain
cInstituto de Ciencia Molecular/ ICMol, Universidad de Valencia, C/Catedrático José Beltrán No. 2, 46980 Paterna, Valencia, Spain. E-mail: stiriba@uv.es; Tel: +34-96-354-4445
First published on 16th February 2018
The copper(I) catalyzed azide–alkyne [3 + 2] cycloaddition (32CA) reaction and its uncatalyzed version have been studied for systematic understanding of this relevant organic transformation, using DFT calculations at the B3LYP/6-31G(d) (LANL2DZ for Cu) computational levels. In the absence of a copper(I) catalyst, two regioisomeric reaction paths were studied, indicating that the 32CA reaction takes place through an asynchronous one-step mechanism with a very low polar character. The two reactive channels leading to 1,4- and 1,5-regisomer present similar high activation energies of 18.84 and 18.51 kcal mol−1, respectively. The coordination of copper(I) to alkyne produces relevant changes in this 32CA reaction. Analysis of the global and local electrophilicity/nucleophilicity allows explaining correctly the behaviors of the copper(I) catalyzed cycloaddition. Coordination of the copper to alkyne changes the mechanism from a non-polar one-step mechanism to a polar stepwise one, as a consequence of the high nucleophilic character of the dinuclear Cu(I)-acetylide complex. Parr and Fukui functions and Dual Descriptor correctly explain the observed regioselectivity by means of the most favorable two-center interaction that takes place along the 1,4 reaction path.
In their seminal report on the use of Cu(I)-catalyzed 32CA reaction of azides with terminal alkynes, Sharpless and Fokin proposed an early mechanism (Fig. 1) that has served as a surprisingly good starting point for further posterior mechanistic investigations.3
They later reported the results of an extensive DFT5 study in 2005, finding that an activation barrier of 23.7 kcal mol−1 rules out a one-step mechanism from the neutral Cu(I)-acetylide. Their calculations also predicted the activation barrier for the formation of a six-membered copper(III) metallacycle to be 14.9 kcal mol−1 compared to a barrier of 25.7 kcal mol−1 for the uncatalyzed cycloaddition, providing then an explanation for the enormous rate acceleration by using copper(I) as catalyst. Interestingly, interaction of copper(I) with the terminal alkyne π-system, namely propyne was found to lower the pKa of the terminal proton by almost 10 units facilitating deprotonation, yet reaction from the non-deprotonated Cu(I)-alkyne π-complex was ruled even to be more unfavorable than the uncatalyzed reaction with a barrier of 27.8 kcal mol−1.6
Based on the formation and spectroscopic identification of copper(I) acetylides by the action of a copper(I) complex with a terminal alkyne and the absence of evidences that point to internal triple bonds undergoing cycloaddition,7–9 it is now assumed that formation of copper(I) acetylides is an important activation step being immediately engaged in an efficient sequence affording the formation of 1,4-disubstitued 1,2,3-triazol in a regioselective manner.7 While computational studies supported the involvement of Cu(I)-acetylides interacting with organoazides as originally suggested by Sharpless, these complexes were only assumptions until direct evidence was provided by Straub.8 In fact, the reaction of an N-heterocyclic carbene Cu(I)-acetylide complex with a sterically hindered organoazide led to the formation and isolation of a stable Cu(I)-triazolide complex, which reacted quantitatively with acetic acid to give the expected triazole product within minutes. This isolated intermediate did add more complexity to already conflicting reports on the speciation and nuclearity of copper(I) in the transition state structures (TSs) and intermediates. Kinetic studies have determined the rate law to be first order in azide, between first and second order in alkyne and second order with respect to the copper ions.10,11 It was also found that the order of reaction with respect to each reagent to vary relatively and even a negative order has been measured for the concentration of alkyne in certain catalytic systems.9,12
Recently, Fokin reported that Cu(I)-acetylides only reacted with benzyl azide by adding exogenous Cu(I). In fact, without exogenous Cu(I) added to the reaction mixture, no appreciable conversion of the Cu(I)-acetylide and benzyl azide into triazole products was observed, which supports the hypothesis that a dinuclear species with two copper atoms operate in discrete specialized roles; one as a purely σ-bound ligand, and the other acting solely through weak π-complexation.13 Such a postulated π,σ-bis(copper) acetylide intermediate type and a new bis(metallated) triazole complex, viewed as one of the resting states of the catalytic cycle, were elegantly isolated and X-ray structurally characterized by Bertrand, by using the strong properties σ-donating and π-accepting properties of cyclic (alkyl)(amino)carbenes for the isolation of copper metal ions.14 Electrospray ionization mass spectrometry (ESI-MS) allowed also the fishing and structural characterization of such a dinuclear copper species as intermediate in CuAAC, using a combination of neutral reactant approach and the ion-tagging strategy.15 Previous computational studies have suggested that bridging dicopper(I,III) μ-alkenylidene fragments are thermodynamically highly stable and show superior reactivity towards organoazides compared to the ring strain in a CuCC intermediate despite the entropically disfavored inclusion of a second copper atom.16 The thermodynamic stability of the favored dicopper(I,III) μ-alkenylidene fragments was attributed to the elimination of high ring strain in the mononuclear six-membered structure. However, isotopic enrichment of triazole products from addition of an isotopically pure 63Cu(I) coordination complex to preformed naturally abundant Cu(I)-acetylides (63Cu/65Cu ratio of 69/31) in the presence of benzyl azide discard the hypothesis of Cu atoms acting in discrete roles and instead suggesting a mechanism in which two chemically equivalent copper atoms work in cooperative manner. Based on these results and previous kinetic studies, Fokin proposed a revisited mechanism whereby a σ-bound Cu(I)-acetylide bearing a π complexed copper atom reacts with an organoazide forming a bridging dicopper μ-acetylide intermediate (Fig. 2).
This mechanistic study represents the most up-to-date picture of the identity of important intermediates and TSs involved in the CuAAC reaction,14,15 being supported by the last experimental works that reported the elucidation of the exact structural features of the key dicopper intermediate species responsible for the highest rate acceleration accomplished by Cu(I) catalysis in CuAAC and confirmed by computational studies that had thoroughly proposed such dicnuclear copper intermediates.17,18
Recent Molecular Electron Density Theory (MEDT)19 studies devoted to 32CA reactions have allowed establishing a very good correlation between the electronic structure of TACs and their reactivity towards ethylene.20 Thus, depending on the electronic structure of the TAC, the non-polar 32CA reactions have been classified into pseudodiradical type (pdr-type), pseudoradical type (pmr-type), carbenoid type (cb-type) and zwiterionic type (zw-type) in such way that the reactivity decreases in the order pdr-type < pmr-type = cb-type < zw-type.20b The simplest azide, hydrazoic acid HN3, has a zwitterionic structure, thus participating in zw-type 32CA reactions. Although the 32CA reaction of hydrazoic acid with ethylene has a very high activation energy, 21.3 kcal mol−1, zw-type 32CA reactions can be accelerated by increasing the nucleophilic character of the TAC and the electrophilic character of the ethylene derivative, or vice versa.21
We herein provide a MEDT study, using DFT methods, that elucidates the mechanism of copper(I)-catalyzed azide–alkyne zw-type 32CA reaction, explaining the role of the catalyst in the different steps of the mechanism and its effect on the regioselective formation of 1,4-disubstitued 1,2,3-triazoles.
The global electron density transfer (GEDT)30 was computed by the sum of the natural atomic charges (q), obtained by a natural population analysis (NPA),31 of the atoms belonging to each framework (f) at the TSs; GEDT = Σqf. The sign indicates the direction of the electron density flux in such a manner that positive values mean a flux from the considered framework to the other one.
ω = μ2/2η, μ= (EH + EL)/2 and η= (EL − EH) |
Since the electron density donation process from a neutral molecule is thermodynamically unfavorable; we can assert that the best nucleophiles are those having low ionization potentials. Based on this idea, Domingo introduced an empirical (relative) nucleophilicity index35 (N) based on the HOMO energies obtained within the Kohn–Sham scheme,36 defined as:
N = EHOMO (Nu) − EHOMO (TCE) |
Nucleophilicity is referred to tetracyanoethylene (TCE) because it presents the lowest HOMO energy in a large series of molecules already investigated in the context of polar cycloadditions. This choice allows us to conveniently handle a nucleophilicity scale of positive values. Based on electron localization function bonding analysis along the reaction paths associated with C–C bond formation processes in polar reactions, Domingo has recently reported a new local reactivity index, named the local electrophilic, Pk+, and nucleophilic, Pk−, Parr functions which are obtained from the analysis of the Mulliken atomic spin density (ASD) at the radical anion and at the radical cation of the corresponding reagents.37 Such indexes are given by the following equations:
P−(r) = ρsrc(r) for electrophilic attacks |
P+(r) = ρsra(r) for electrophilic attacks |
ωk = ωPk+ |
Nk = NPk− |
Therefore, one can easily find the ωmax and Nmax, which are associated with the most electrophilic and most nucleophilic centers in a molecule, respectively, and correspond to the centers with the highest electron density developed along the GEDT process.30
μ | η | ω | N | ||
---|---|---|---|---|---|
Methylazide | −3.85 | 6.18 | 1.19 | 2.17 | |
Methylacetylene | −2.68 | 8.74 | 0.41 | 2.06 | |
Dinuclear Cu(I)-acetylide | −1.78 | 0.91 | 1.74 | 5.88 | |
Reactive complex | −3.02 | 2.11 | 2.15 | 4.05 |
From Table 1, we can notice that the electronic chemical potential of the dinuclear Cu(I)-acetylide, μ = −1.78 eV, is higher than that of methylazide, μ = −3.85 eV, indicating that at the TSs, the GEDT30 will takes place from the dinuclear Cu(I)-acetylide fragments towards the methylazide one in clear complete agreement with the GEDT computed at the corresponding TSs (vide infra).
Methylazide is a moderate electrophile, ω = 1.19 eV, and a moderate nucleophile, N = 2.17 eV within the electrophilicity38 and nucleophilicity40 scales. On the other hand, methylacetylene has an electrophilicity ω index of 0.41 eV, and a nucleophilicity N index of 2.06 eV, being classified as a marginal electrophile and a moderate nucleophile. The low electrophilic and nucleophilic character of methylazide and methylacethylene indicate that the corresponding 32CA reaction will have a low polar character. This is confirmed by the computed GEDT at the corresponding TSs (vide infra).
Coordination of the copper(I) to the carbon (C5) atom of methylacetylene increases the electrophilicity ω index of the corresponding complex dinuclear copper(I)-acetylide complex to 1.74 eV, but more markedly its nucleophilcity N index to 5.88 eV. This high value indicates that this Cu(I) complex will participate as a strong nucleophile in 32CA reactions with a large polar character.
Along a polar reaction, the bond breaking and bond forming processes take place at a specific position of a molecule, and if a molecule has several positions with similar reactivity; we should address the regio- or chemoselectivity issues of the reaction. This situation is common in cycloaddition reactions, in which the different approach modes of a reagent towards the other can yield two competitive isomers named regioisomers.
Recent studies focused on polar cycloaddition reactions have shown that the most favorable regioisomeric channel is that involving the bond formation between the most electrophilic and the most nucleophilic center of the reagents.30 Consequently, it is desirable to have local reactivity indices able to characterize these relevant centers in organic molecules.37 Cycloaddition reactions with a large polar character have shown that the analysis of the local electrophilicity ωk at the electrophilic reagent and the local nucleophilicity Nk at the nucleophilic one derived from Parr functions allows explaining the regioselectivity that is experimentally observed. So, the values of the electrophilic and nucleophilic Parr functions, the local electrophilicity and the local nucleophilicity at the methylazide, dinuclear copper–acetylide complex and reactive complex are calculated and summarized in Table 2.
Number of atom | Pk+ | Pk− | ωk | Nk | |
---|---|---|---|---|---|
Methylazide | N1 | −0.01 | 0.65 | −0.01 | 1.40 |
N3 | 0.56 | 0.45 | 0.67 | 0.97 | |
Dinuclear Cu(I)-acetylide | C4 | −0.04 | −0.06 | −0.06 | −0.37 |
C5 | −0.01 | 0.16 | −0.01 | 0.96 | |
Cu6 | 0.43 | 0.16 | 0.75 | 0.94 | |
Cu7 | 0.41 | 0.16 | 0.71 | 0.93 | |
Reactive complex | N1 | 0.05 | 0.09 | 0.10 | 0.36 |
N3 | 0.42 | 0.07 | 0.91 | 0.26 | |
C4 | −0.01 | 0.26 | −0.02 | 1.06 | |
C5 | 0.01 | 0.12 | 0.02 | 0.49 |
Analysis of the local electrophilicity ωk at dinuclear copper(I)-acetylide complex indicates that the Cu6 copper is the more electrophilically activated center of this intermediate, ωCu6 = 0.75 eV, and analysis of the local nucleophilicity at organoazide indicates that the N1 nitrogen is the most nucleophilic center, NN1 = 1.4 eV. Consequently, along a polar process, the most favorable single bond formation will correspond to the N1–Cu6, leading to reactive complex, which has the largest electrophilic activation at the N3 nitrogen, ωN3 = 0.91 eV, and the largest nucleophilic activation at C4 carbon, NC4 = 1.06 eV (see Table 2, Fig. 3). In its intramolecular mode, both nucleophilic and electrophilic frameworks are present in the same molecule. Consequently, formation of the first C–N single bond will take place through the nucleophilic attack of the C4 carbon of the acetylide on the N3 of the azide, in complete agreement with the regioselectivity experimentally observed. Such an electron density transfer fact, in a donor–acceptor manner, from C4 to N3 has also been observed recently by Tüzün17 using Natural Bond Orbital (NBO) analyses to explain the formation of σC4–N3 in the intermediate complex (IC) (see Table 3) but contradicts the one found by Quirante using QTAIM results, while explaining the electronic nature of the mechansim.18 The regioselective formation of 1,4 versus 1,5-disubstitued 1,2,3-triazole was also confirmed by using the Local Fukui Function and Dual Descriptor as different CDFT methodologies to the one thoroughly used in this study (Table S1 in ESI material†).
Fig. 3 Local nucleophilicites Nk, (in eV in blue) and local electrophilicites ωk (in eV in red) calculated using Parr function. |
Our calculations provide, as expected, analogous energy barriers for the 1,4- and 1,5-regiochemistries (Fig. 4), resulting in 18.84 (TS14) and 18.51 (TS15) kcal mol−1, respectively. The corresponding energy difference, 0.27 kcal mol−1, explains the lack of regioselectivity when the 32CA reaction is carried out in the absence of any catalyst as well as the slowness of the transformation. The formation of triazoles is highly exothermic by 70.85 kcal mol−1 and 70.93 kcal mol−1, respectively.
Fig. 4 Calculated energy (kcal mol−1) barriers for the uncatalyzed thermal azide–alkyne 32CA reaction in absence of copper(I) species. |
B3LYP/6-311G(d,p) single point energy calculations at the stationary points involved in the 32CA reaction of methylazide with methylacetylene were performed (see Table S2 in ESI material†). The activation energies increase by 2.2 and 2.6 kcal mol−1, and the exothermic character of the reaction decreases by 7.5 as a consequence of a higher stabilization of methylazide that the other stationary point. Non substantial changes are found with the B3LYP/6-31G(d) analysis.
The geometries of the TSs associated to the 32CA reactions between methyl azide and methylacetylene are given in Fig. 5. The lengths of the C–N forming bonds at the regioisomeric TSs are: 2.196 (C4–N3) and 2.199 (C5–N1) Å at TS14, and 2.304 (C4–N1) and 2.078 (C5–N3) Å at TS15. The extent of the asynchronicity of the bond formation in a 32CA reactions can be measured through the difference between the lengths of the two single bonds that are being formed in the reaction, Δr = dist1 − dist2 (in Å). The asynchronicity at the TSs is 0.22 at TS14 and 0.01 at TS15. These results indicate that the 1.5-regioisomer process is more asynchronous than the 1.4-regioisomer one.
Fig. 5 Optimized geometries of the regioisomeric TSs, TS14 and TS15, associated with the uncatalyzed 32CA reaction of methyl azide and propyne. The distances are given in Å. |
Numerous studies have shown a strong relationship between the polar character and the feasibility of organic reactions;30 the larger the GEDT at the TS is, the more polar and thus the faster is the reaction. In order to evaluate the electronic nature, i.e. polar or non-polar of the 32CA reaction between methylazide and propyne, the GEDT at the TSs was analysed. The resulting values are reported in Fig. 5. The natural charges at the TSs appear to be shared between the methylacetylene and methylazide. The GEDT, which fluxes from alkyne to azide at the TSs, is 0.04e at TS14 and 0.08e at TS15. These very low values indicate that these TSs have a non-polar character, in agreement with the low electrophilic character of methylazide and the low nucleophilic character of methylacethylene.
The reaction has also been considered in water as solvent. The relative energies are systematically lower than the gas phase results for starting reagents, reactive complex, intermediate complex and transition states (see Fig. 6). We noticed that inclusion of the water as a solvent has not changed the picture of the mechanism.
The geometries of the TSs and the intermediate involved in the Cu(I)-catalyzed 32CA reaction are given in Table 3. At the reactive complex associated with the nucleophilic attack of the azide by nitrogen atom N1 at the dinuclear Cu(I)-acetylide, the length of the Cu6–N1 forming bond is 2.100 Å. The C4–N3 bond length at the corresponding TS1 is 1.900 Å, while the distance between the Cu6 and N1 nitrogen atom becomes 2.020 Å. The Cu6–N1 and C4–N3 bonds length at the corresponding intermediate complex (IC) are 1.968 and 1.458 Å respectively. Finally, at TS2 associated with ring-closure process, the length of the C5–N1 forming bond is 2.215 Å.
The computed NPA atomic charges were partitioned between the organoazide and the acetylide frameworks. The corresponding GEDT values are reported in Table 3. The GEDT developed along the nucleophilic attack of the propyne framework to the azide one is: 0.68e at RC, 0.54e at TS1, 0.63e at IC and 0.58e at TS2. The high polar character of this zw-type 32CA reaction is in clear agreement with the large increase in the nucleophilicity of alkyne with the coordination to the copper(I).
Coordination of copper(I) to alkyne produces relevant changes in this zw-type 32CA reaction as a consequence of the large enhancement in the nucleophilicity of the corresponding dinuclear Cu(I)-acetylide complex. Formation of the experimentally observed 1,4-tiazole takes place through a stepwise mechanism with formation of an intermediate complex. Analysis of the CDFT global and local electrophilicity/nucleophilicity indices allows explaining correctly the behaviors of the copper(I) catalyzed zw-type 32CA reaction. Coordination of the copper to alkyne changes the mechanism from a non-polar one-step mechanism to a polar stepwise one, as a consequence of the large nucleophilic character of the dinuclear Cu(I)-acetylide complex. Analysis of the local indexes allows characterizing the more nucleophilic/electrophilic center of the reagent. Regioselectivity is correctly explained by means of the favorable two-center interaction that takes place along the 1,4 reaction path.
Footnotes |
† In memory of our friend Prof. Abderrahim Boutalib from UCAM who passed away in 2015. |
‡ Electronic supplementary information (ESI) available: Cartesian coordinates, energies, and imaginary frequency (transition states) for all optimized geometries. See DOI: 10.1039/c7ra10653j |
This journal is © The Royal Society of Chemistry 2018 |