Advancing micro-nano supramolecular assembly mechanisms of natural organic matter by machine learning for unveiling environmental geochemical processes

Ming Zhang, Yihui Deng, Qianwei Zhou, Jing Gao, Daoyong Zhang and Xiangliang Pan

Environ. Sci.: Processes Impacts, 2025, 27, 24
DOI: 10.1039/D4EM00662C

Twenty-five years of natural products research in NuBBE

Helena Mannochio-Russo, Ana Letícia Pires dos Santos, Paula Carolina Pires Bueno, Rafael Vieira, Meri Emili Ferreira Pinto, Suzana Aparecida Silva Queiroz, Luiz Antonio Dutra, Lidiane Gaspareto Felippe, Andrea Nastri de Luca Batista, Tatiana Maria de Souza-Moreira, Marilia Valli, Rebeca Previate Medina, Angela Regina Araujo, Alan Cesar Pilon, Ian Castro-Gamboa, Alberto José Cavalheiro, Dulce Helena Siqueira Silva, Maysa Furlan and Vanderlan da Silva Bolzani

Front. Nat. Prod., 2023, 2
DOI: 10.3389/fntpr.2023.1252092

Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin

Amir Y Alwali, Diane Santos, César Aguilar, Audrey Birch, Lorena Rodriguez-Orduña, Carson B Roberts, Ramya Modi, Cuauhtemoc Licona-Cassani and Elizabeth I Parkinson

Journal of Industrial Microbiology and Biotechnology, 2024, 51
DOI: 10.1093/jimb/kuae014

Automated Diagnosis and Phenotyping of Tuberculosis Using Serum Metabolic Fingerprints

Yajing Liu, Ruimin Wang, Chao Zhang, Lin Huang, Jifan Chen, Yiqing Zeng, Hongjian Chen, Guowei Wang, Kun Qian and Pintong Huang

Advanced Science, 2024, 11
DOI: 10.1002/advs.202406233

Approaches, Strategies and Procedures for Identifying Anti-Inflammatory Drug Lead Molecules from Natural Products

Tenzin Jamtsho, Karma Yeshi, Matthew J. Perry, Alex Loukas and Phurpa Wangchuk

Pharmaceuticals, 2024, 17, 283
DOI: 10.3390/ph17030283

Exploring the complexities of bitterness: a comprehensive review of methodologies, bitterants, and influencing factors centered around coffee beverage

Gui-Lin Hu, Jameel Hizam Alafifi, Chen-Xi Quan, Abdulbaset Al-Romaima and Ming-Hua Qiu

Critical Reviews in Food Science and Nutrition, 2025, 1
DOI: 10.1080/10408398.2025.2512220

Matrix free laser desorption ionization coupled to trapped ion mobility mass spectrometry: an innovative approach for isomer differentiation and molecular network visualization

Manon Meunier, Martina Haack, Dania Awad, Thomas Brück, Khalijah Awang, Marc Litaudon, Frédéric Saubion, Marc Legeay, Dimitri Bréard, David Guilet, Séverine Derbré and Andreas Schinkovitz

Talanta, 2025, 287, 127626
DOI: 10.1016/j.talanta.2025.127626

Progress in the detection and analysis of unknown or fuzzy biological analytes

Jiale Gong, Huihan Liang, Yongrui Li, Xuan Wang, Yizhuo Ma, Zi Yang, Jia Huang, Maria Abbasi, Fang Liu, Aiqin Luo, Jianli Zhang and Lina Geng

TrAC Trends in Analytical Chemistry, 2025, 192, 118375
DOI: 10.1016/j.trac.2025.118375

Revolutionizing Natural Product Science with AI: Integrating Diverse Data and Knowledge Graphs

Pooja Dave, Krunal Panchal, Aayush Gandhi and Brahmdutta Raval

JNR, 2025, 1695
DOI: 10.18311/jnr/2025/48515

AI-driven drug discovery from natural products

Feng-Lei Duan, Chun-Bao Duan, Hui-Lin Xu, Xin-Ying Zhao, Otgonpurev Sukhbaatar, Jie Gao, Ming-Zhi Zhang, Wei-Hua Zhang and Yu-Cheng Gu

Advanced Agrochem, 2024, 3, 185
DOI: 10.1016/j.aac.2024.06.003

Characterization of defective coffee beans and blends differentiation based on 1H qNMR technique

Gui-Lin Hu, Chen-Xi Quan, Hao-Peng Dai and Ming-Hua Qiu

Current Research in Food Science, 2024, 9, 100870
DOI: 10.1016/j.crfs.2024.100870

Toward a unified benchmark and framework for deep learning-based prediction of nuclear magnetic resonance chemical shifts

Fanjie Xu, Wentao Guo, Feng Wang, Lin Yao, Hongshuai Wang, Fujie Tang, Zhifeng Gao, Linfeng Zhang, Weinan E, Zhong-Qun Tian and Jun Cheng

Nat Comput Sci, 2025, 5, 292
DOI: 10.1038/s43588-025-00783-z

New drug discovery and development from natural products: Advances and strategies

Yixin Wang, Fan Wang, Wenxiu Liu, Yifei Geng, Yahong Shi, Yu Tian, Bin Zhang, Yun Luo and Xiaobo Sun

Pharmacology & Therapeutics, 2024, 264, 108752
DOI: 10.1016/j.pharmthera.2024.108752

Revitalizing natural products for sustainable drug Discovery: Innovations bridging food bioscience and green therapeutic development

Ramachandran Chelliah, Selvakumar Vijayalakshmi, Murugan Karuvelan, Kaliyan Barathikannan, Sulav Ghimeray and Deog-Hwan Oh

Sustainable Chemistry and Pharmacy, 2025, 46, 102082
DOI: 10.1016/j.scp.2025.102082

Mass spectral database-based methodologies for the annotation and discovery of natural products

Fengyao Yang, Zeyuan Liang, Haoran Zhao, Jiayi Zheng, Lifang Liu, Huipeng Song and Guizhong Xin

Chinese Journal of Natural Medicines, 2025, 23, 410
DOI: 10.1016/S1875-5364(25)60852-1

High-throughput platforms for machine learning-guided lipid nanoparticle design

Andrew R. Hanna, David A. Issadore and Michael J. Mitchell

Nat Rev Mater, 2025
DOI: 10.1038/s41578-025-00831-0

An integrated 3-M workflow for accelerated annotation of natural products: Flavonoids in Daemonorops draco as a case study

Wenxiang Fan, Ziwei Li, Longchan Liu, Yu Wang, Kaixian Chen, Linnan Li, Zhengtao Wang and Li Yang

Talanta, 2025, 282, 126921
DOI: 10.1016/j.talanta.2024.126921

Combinatorial biosynthesis for the engineering of novel fungal natural products

Elizabeth Skellam, Sanjeevan Rajendran and Lei Li

Commun Chem, 2024, 7
DOI: 10.1038/s42004-024-01172-9

Invalid SMILES are beneficial rather than detrimental to chemical language models

Michael A. Skinnider

Nat Mach Intell, 2024, 6, 437
DOI: 10.1038/s42256-024-00821-x

Chemo-enzymatic synthesis of bioactive compounds from traditional Chinese medicine and medicinal plants

Shuang Liu, Shuo Yang and Ping Su

Sci Tradit Chin Med, 2024, 2, 95
DOI: 10.1097/st9.0000000000000027

Computer-Aided Drug Design in Research on Chinese Materia Medica: Methods, Applications, Advantages, and Challenges

Ban Chen, Shuangshuang Liu, Huiyin Xia, Xican Li and Yingqing Zhang

Pharmaceutics, 2025, 17, 315
DOI: 10.3390/pharmaceutics17030315