Synthesis of Zn(ii) coordination complexes, their molecular design and docking with SARS-CoV-2 RBD protein and Omicron spike protein

Simranjeet Singh and Mukesh Choudhary

New J. Chem., 2024, 48, 9287
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Mass spectrometry-intensive top-down proteomics: an update on technology advancements and biomedical applications

Tian Xu, Qianjie Wang, Qianyi Wang and Liangliang Sun

Anal. Methods, 2024, 16, 4664
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Elucidation of N-/O-glycosylation and site-specific mapping of sialic acid linkage isomers of SARS-CoV-2 human receptor angiotensin-converting enzyme 2

Liming Wei, Yuning Chen, Xiaoxiao Feng, Jun Yao, Lei Zhang, Xinwen Zhou, Guoquan Yan, Hong Qiu, Chunhe Wang and Haojie Lu

Analyst, 2023, 148, 5002
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A phenoxy-bridged trinuclear Ni(ii) complex: synthesis, structural elucidation and molecular docking with viral proteins

Sunil Kumar and Mukesh Choudhary

New J. Chem., 2023, 47, 10424
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Many Roles of Carbohydrates: A Computational Spotlight on the Coronavirus S Protein Binding

Suman Maity and Atanu Acharya

ACS Appl. Bio Mater., 2024, 7, 646
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From Science to Fiction – Connecting In Vivo and In Vitro Results in Polyprotein Processing of Coronaviruses

Kira Schamoni-Kast and Charlotte Uetrecht

Journal of Molecular Biology, 2025, 169370
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Exploiting ion‐mobility mass spectrometry for unraveling proteome complexity

Stan Perchepied, Zhuoheng Zhou, Goran Mitulović and Sebastiaan Eeltink

J of Separation Science, 2023, 46
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Up, up, down, down: the structural biology of the SARS-CoV-2 spike protein and how it cheats the immune system

Sabrina Stäb, Nicholas M. Pearce, Dale E. Tronrud, Helen Ginn, Elisa Fadda, Gianluca Santoni and Andrea Thorn

Crystallography Reviews, 2024, 30, 74
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Lectin Fingerprinting Distinguishes Antibody Neutralization in SARS-CoV-2

Michael G. Wuo, Amanda E. Dugan, Melanie Halim, Blake M. Hauser, Jared Feldman, Timothy M. Caradonna, Shuting Zhang, Lauren E. Pepi, Caroline Atyeo, Stephanie Fischinger, Galit Alter, Wilfredo F. Garcia-Beltran, Parastoo Azadi, Deb Hung, Aaron G. Schmidt and Laura L. Kiessling

ACS Cent. Sci., 2023, 9, 947
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Top-down proteomics

David S. Roberts, Joseph A. Loo, Yury O. Tsybin, Xiaowen Liu, Si Wu, Julia Chamot-Rooke, Jeffrey N. Agar, Ljiljana Paša-Tolić, Lloyd M. Smith and Ying Ge

Nat Rev Methods Primers, 2024, 4
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Top-Down Proteomics and the Challenges of True Proteoform Characterization

Allen Po and Claire E. Eyers

J. Proteome Res., 2023, 22, 3663
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Protein post-translational modification in SARS-CoV-2 and host interaction

Nana Cheng, Mingzhu Liu, Wanting Li, BingYue Sun, Dandan Liu, Guoqing Wang, Jingwei Shi and Lisha Li

Front. Immunol., 2023, 13
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Mass Spectrometry Strategies for O-Glycoproteomics

Amanda Helms and Jennifer S. Brodbelt

Cells, 2024, 13, 394
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O‐glycosylation in viruses: A sweet tango

Annan Ming, Jianxin Zhao, Yihan Liu, Yibo Wang, Xiaohui Wang, Jing Li and Leiliang Zhang

mLife, 2024, 3, 57
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Synthesis and characterization of Ag(I) and Cu(I) complexes of triphenylphosphine: crystal structures, Hirshfeld surface analyses, and molecular docking with SARS-CoV-2 and its Omicron variant

Simranjeet Singh and Mukesh Choudhary

Journal of Coordination Chemistry, 2024, 77, 101
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Hydrophilic Interaction Chromatography Coupled to Ultraviolet Photodissociation Affords Identification, Localization, and Relative Quantitation of Glycans on Intact Glycoproteins

Virginia K. James, Annika A. M. van der Zon, Edwin E. Escobar, Sean D. Dunham, Andrea F. G. Gargano and Jennifer S. Brodbelt

J. Proteome Res., 2024, 23, 4684
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Effects of N-glycan modifications on spike expression, virus infectivity, and neutralization sensitivity in ancestral compared to Omicron SARS-CoV-2 variants

Sabrina Lusvarghi, Charles B. Stauft, Russell Vassell, Brittany Williams, Haseebullah Baha, Wei Wang, Sabari Nath Neerukonda, Tony Wang, Carol D. Weiss and Penny L. Moore

PLoS Pathog, 2023, 19, e1011788
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Sequential glycosylations at the multibasic cleavage site of SARS-CoV-2 spike protein regulate viral activity

Shengjun Wang, Wei Ran, Lingyu Sun, Qingchi Fan, Yuanqi Zhao, Bowen Wang, Jinghong Yang, Yuqi He, Ying Wu, Yuanyuan Wang, Luoyi Chen, Arpaporn Chuchuay, Yuyu You, Xinhai Zhu, Xiaojuan Wang, Ye Chen, Yanqun Wang, Yao-Qing Chen, Yanqiu Yuan, Jincun Zhao and Yang Mao

Nat Commun, 2024, 15
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Decoding Extracellular Protein Glycosylation in Human Health and Disease

Alexandra D. Steigmeyer, Sarah C. Lowery, Valentina Rangel-Angarita and Stacy A. Malaker

Annual Review of Analytical Chemistry, 2025, 18, 241
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FLASHApp: Interactive Data Analysis and Visualization for Top‐Down Proteomics

Tom David Müller, Jihyung Kim, Andrew Almaguer, Ayesha Feroz, Jaekwan Kim, Axel Walter, Wonhyeuk Jung, Oliver Kohlbacher and Kyowon Jeong

Proteomics, 2025
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