Avelyn Mae V.
Delos Reyes
ac,
Christopher S.
Nieves Escobar
bc,
Alberto
Muñoz
c,
Maya I.
Huffman
cd and
Derek S.
Tan
*abcde
aPharmacology Graduate Program, Weill Cornell Graduate School of Medical Sciences, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA. E-mail: tand@mskcc.org
bTri-Institutional PhD Program in Chemical Biology, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA
cChemical Biology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA
dTri-Institutional Chemical Biology Summer Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA
eTri-Institutional Research Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA
First published on 15th September 2023
Carboxylic acids are an important structural feature in many drugs, but are associated with a number of unfavorable pharmacological properties. To address this problem, carboxylic acids can be replaced with bioisosteric mimics that interact similarly with biological targets but avoid these liabilities. Recently, 3-oxetanols have been identified as useful carboxylic acid bioisosteres that maintain similar hydrogen-bonding capacity while decreasing acidity and increasing lipophilicity. However, the installation of 3-oxetanols generally requires multistep de novo synthesis, presenting an obstacle to investigation of these promising bioisosteres. Herein, we report a new synthetic approach involving direct conversion of carboxylic acids to 3-oxetanols using a photoredox-catalyzed decarboxylative addition to 3-oxetanone. Two versions of the transformation have been developed, in the presence or absence of CrCl3 and TMSCl cocatalysts. The reactions are effective for a variety of N-aryl α-amino acids and have excellent functional group tolerance. The Cr-free conditions generally provide higher yields and avoid the use of chromium reagents. Further, the Cr-free conditions were extended to a series of N,N-dialkyl α-amino acid substrates. Mechanistic studies suggest that the Cr-mediated reaction proceeds predominantly via in situ formation of an alkyl-Cr intermediate while the Cr-free reaction proceeds largely via radical addition to a Brønsted acid-activated ketone. Chain propagation processes provide quantum yields of 5 and 10, respectively.
Fig. 1 (a) Physicochemical and pharmacological characteristics of carboxylic acids and 3-oxetanol bioisosteres (C⋯O = distance from carbonyl carbon to oxygen; lnKeq = hydrogen-bonding equilibrium constant determined by colorimetric assay for blue-shift of a fluorescent pyrazinone; logD7.4 = 1-octanol/water distribution coefficient, pH 7.4; logPapp = apparent permeability coefficient in parallel artificial membrane permeability assay).10,13 (b) Decarboxylative coupling of carboxylic acids and aldehydes under photoredox catalysis.14 (c) Addition of α-silyl amine-derived nucleophiles to aldehydes and ketones under photoredox catalysis.15 (d) Proposed direct transformation of carboxylic acids to 3-oxetanol bioisosteres. |
Oxetanes have been investigated widely as bioisosteric replacements for gem-dimethyl groups,13,16–19 and have also attracted attention as carbonyl bioisosteres.13,17–23 Recently, the use of 3-oxetanols as carboxylic acid bioisosteres has been explored by Ballatore, Brunden, and coworkers.10 Comparison of the physicochemical properties of hydrocinnamic acid and its 3-oxetanol analogue, indicate that the latter is more lipophilic and membrane permeable (logD7.4: −0.49 vs. 2.07, logPapp: −5.79 vs. −5.08) (Fig. 1a).10 A 3-oxetanol analogue of ibuprofen was also evaluated and shown to have inhibitory activity against the cyclooxygenase (COX) pathway in a cell-based assay.10 This work provided important proof of concept for the use of 3-oxetanols as effective carboxylic acid bioisosteres. However, access to 3-oxetanols generally requires multistep de novo synthesis. Examples include addition of organometallic reagents to 3-oxetanone,10,16 Paternò–Büchi reaction of silyl enol ethers and aldehydes,11 and ring contraction of pentofuranose sugars.12 This lack of direct synthetic access from carboxylic acid substrates presents an obstacle to the broad exploration of 3-oxetanols as carboxylic acid bioisosteres. To address this problem, we sought to develop a method for direct conversion of carboxylic acids to the corresponding 3-oxetanol analogues.
Photoredox catalysis has emerged as an indispensable tool in synthetic organic chemistry. This mode of catalysis relies on photosensitive catalysts that convert light into chemical energy through single-electron transfer (SET) events with organic substrates, generating reactive radical intermediates under mild conditions, which can then engage in a variety of chemical transformations.24,25 With this in mind, we noted recent work by König and coworkers demonstrating photocatalytic decarboxylative activation of phenylacetic acids using the organic dye 4CzIPN (1,2,3,5-tetrakis(carbazole-9-yl)-4,6-dicyanobenzene, 2,4,5,6-tetrakis(9H-carbazol-9-yl) isophthalonitrile) for benzylation of aldehydes (Fig. 1b).14 More recently, Glorius and coworkers reported a dual Cr/photoredox catalytic system to convert trimethylsilylmethylamines to α-amino carbanion equivalents for addition to aldehydes and ketones (Fig. 1c).15 Inspired by these reports, we envisioned that carboxylic acids could be activated under photoredox catalysis for Nozaki–Hiyama–Kishi-type addition26 to 3-oxetanone to form the corresponding 3-oxetanol analogues (Fig. 1d), facilitating access to these understudied bioisosteres.
Entry | 2 (equiv.) | Base | Additive | Solvent | Yielda (%) |
---|---|---|---|---|---|
a Yields based on 1H-NMR analysis of crude reaction product in the presence of an internal standard, relative to N-phenyl glycine (theoretical maximum 50% for entries 1–11). b Photocatalyst: Ir-A = [Ir{dF(CF3)2ppy}2(bpy)]PF6 = [2,2′-bipyridine-N1,N1′]bis[3,5-difluoro-2-[5-(trifluoromethyl)-2-pyridinyl-N]phenyl-C]iridium(III) hexafluorophosphate. c Photocatalyst: Ir-B = [Ir{dF(CF3)ppy}2(dtbpy)]PF6 = [4,4′-bis(1,1-dimethylethyl)-2,2′-bipyridine-N1,N1′]bis[3,5-difluoro-2-[5-(trifluoromethyl)-2-pyridinyl-N]phenyl-C]iridium(III) hexafluorophosphate. d In absence of CrCl3. e In absence of blue LED light. 4CzIPN = 1,2,3,5-tetrakis(carbazole-9-yl)-4,6-dicyanobenzene, 2,4,5,6-tetrakis(9H-carbazol-9-yl) isophthalonitrile; DMA = N,N-dimethyl acetamide, DMF = N,N-dimethyl formamide; TES = triethylsilyl; THF = tetrahydrofuran; TMS = trimethylsilyl. | |||||
1 | 0.5 | — | — | DMA | 0 |
2 | 0.5 | CsOAc | — | DMA | 7 |
3 | 0.5 | CsOAc | TMSCl | DMA | 22 |
4 | 0.5 | CsOAc | TMSCl | DMF | 25 |
5b | 0.5 | CsOAc | TMSCl | DMF | 24 |
6c | 0.5 | CsOAc | TMSCl | DMF | 17 |
7 | 0.5 | KHCO3 | TMSCl | DMF | 24 |
8 | 0.5 | CsOPiv | TMSCl | DMF | 32 |
9 | 0.5 | CsOPiv | TMSCl | THF | 38 |
10 | 0.5 | CsOPiv | TMSCl | CH3CN | 40 |
11 | 0.5 | CsOPiv | TESCl | CH3CN | 37 |
12 | 1.0 | CsOPiv | TMSCl | CH3CN | 60 |
13 | 2.0 | CsOPiv | TMSCl | CH3CN | 55 |
14d | 1.0 | CsOPiv | TMSCl | CH3CN | 50 |
15d | 1.0 | CsOPiv | — | CH3CN | 47 |
16e | 1.0 | CsOPiv | TMSCl | CH3CN | 0 |
We also evaluated alternative photocatalysts Ir-A and Ir-B,24 but these reactions provided somewhat lower yields (Table 1, entries 5 and 6). We then tested other bases (entries 7 and 8), solvents (entries 8–10), and silyl chlorides (entries 10 and 11) (see ESI Table S1† for complete details).
In these initial experiments, we used 3-oxetanone as the limiting substrate, by analogy to the conditions reported by Glorius.15 Next, we investigated alternative stoichiometric ratios (entries 11–13 and ESI Table S1†), and found that the reaction was most effective with equimolar amounts of the two substrates, providing a serviceable 60% yield (entry 12). Interestingly, the reaction also proceeded in the absence of CrCl3 (Table 1, entry 14), as well as in the absence of both CrCl3 and TMSCl (entry 15), albeit in lower yields; the mechanistic implications of this finding are discussed below. In contrast, control reactions performed in the absence of light (entry 15) or photocatalyst (see ESI Table S1†) did not afford any of the desired product.
A wide range of functional groups were tolerated in other substrates, including a methionine thioether (3l), Boc-protected lysine side chain (3m), serine benzyl and t-butyl ethers (3n and 3o), a tyrosine aryl ether (3p), protected aspartate and glutamate esters (3q and 3r), and an asparagine N-trityl amide (3s). Notably, a free carboxylic acid was also tolerated in an aspartate-derive system (3t), with transformation to the 3-oxetanol occurring regiospecifically at the main-chain carboxylate (34%).
We also investigated the influence of electronics of the aromatic ring using a variety of electron-donating and -withdrawing substituents (3u–x), but no clear reactivity trends were apparent across this series.
Finally, reaction of a symmetrical diacid substrate 1y was evaluated in the presence of 2 equiv. 3-oxetanone (2) (Fig. 2b). The major product was mono-oxetanol 3z with protodecarboxylation observed at the second site, while only 10% of the di-oxetanol 3y was recovered.
Entry | 2 (equiv.) | Base | Solvent | Yielda (%) |
---|---|---|---|---|
a Yields based on 1H-NMR analysis of crude reaction product in the presence of an internal standard, relative to N-phenyl valine (1f). b 1 mol% 4CzIPN. c 20 h reaction time. d Photocatalyst: Ir-A = [Ir{dF(CF3)2ppy}2(bpy)]PF6 = [2,2′-bipyridine-N1,N1′]bis[3,5-difluoro-2-[5-(trifluoromethyl)-2-pyridinyl-N]phenyl-C]iridium(III) hexafluorophosphate. e Photocatalyst: Ir-B = [Ir{dF(CF3)ppy}2(dtbpy)]PF6 = [4,4′-bis(1,1-dimethylethyl)-2,2′-bipyridine-N1,N1′]bis[3,5-difluoro-2-[5-(trifluoromethyl)-2-pyridinyl-N]phenyl-C]iridium(III) hexafluorophosphate. f In absence of blue LED light. DCE = 1,2-dichloroethane; DIPEA = N,N-diisopropylethylamine. | ||||
1b,c | 1.0 | CsOPiv | CH3CN | 9 |
2b | 1.0 | CsOPiv | CH3CN | 8 |
3b | 2.0 | CsOPiv | CH3CN | 10 |
4b | 3.0 | CsOPiv | CH3CN | 11 |
5 | 3.0 | CsOPiv | CH3CN | 13 |
6 | 3.0 | CsOPiv | DCE | 57 |
7 | 3.0 | CsOPiv | CH2Cl2 | 89 |
8 | 3.0 | CsOPiv | i-PrOH | 78 |
9 | 3.0 | Na2CO3 | CH2Cl2 | 24 |
10 | 3.0 | DIPEA | CH2Cl2 | 21 |
11d | 3.0 | CsOPiv | CH2Cl2 | 43 |
12e | 3.0 | CsOPiv | CH2Cl2 | 30 |
13f | 3.0 | CsOPiv | CH2Cl2 | 0 |
Next, we investigated the substrate scope of the Cr-free reaction across the panel of N-aryl α-amino acid substrates (Fig. 2). In most cases, the Cr-free reaction provided higher yields of the 3-oxetanol products compared to those observed with the Cr-mediated reaction, in some cases dramatically so (e.g., 3d, 3f, 3g, 3l, 3q, 3s). Across the entire panel (3a–x), the average yield was 64% for the Cr-free reaction compared to 48% for the Cr-mediated reaction. In the case of the diacid substrate 1y, the Cr-free reaction provided the mono-oxetanol 3z exclusively. Overall, the Cr-free reaction provides significant advantages over the original Cr-mediated reaction with respect to efficiency (time, yield) and elimination of toxic and reactive reagents (CrCl3, TMSCl).
To expand the scope of this transformation beyond N-aryl α-amino acid substrates, we investigated Cr-free reactions of other amino acids. In preliminary experiments, we found that exposure of primary (phenylalanine), secondary (N-trityl glycine), and N-acylated (N-Boc-glycine, N-Cbz-proline, N-phthaloylglycine) α-amino acids to the reaction conditions did not afford any of the desired 3-oxetanol products (not shown). However, morpholine acetic acid was converted to the desired product, albeit with some bis and tris modification observed by MS, presumably at the ring carbons α to the amine. Selectivity for monofunctionalization was improved by decreasing 3-oxetanone stoichiometry from 3 equiv. to 1 equiv. With other slight modifications (changing solvent from CH2Cl2 to i-PrOH to improve solubility; increasing reaction time to 20 h), the desired 3-oxetanol 5a was obtained in 30% yield (Fig. 3). The reaction was also effective for systems containing N-methylpiperazine (5b), N-Boc-piperazine (5c), piperidine (5d), and an acyclic tertiary amine (5e), demonstrating tolerance of heteroatoms, protecting groups, and both cyclic and acyclic substrates.
Fig. 3 Direct carboxylic acid-to-3-oxetanol transformation for cyclic and acyclic N,N-dialkyl α-amino substrates under modified Cr-free reaction conditions. |
First, to assess the reactivity of each of the substrates and reagents to photoactivated 4CzIPN, we conducted fluorescence quenching studies with N-phenylglycine (cesium salt) (1a), 3-oxetanone (2), CsOPiv, TMSCl, and CrCl3.40 Stern–Volmer analysis revealed that the quenching constant of the carboxylate 1a was substantially greater than that of the other reagents in both CH3CN and CH2Cl2.40 This supports a pathway in which the carboxylate substrate 1a reacts with the excited photocatalyst to undergo oxidative decarboxylation, forming an α-amino radical intermediate 6 (Fig. 4). Consistent with this mechanism, no product formation was observed when either transformation was carried out in the presence of TEMPO (1 equiv.).
Next, to assess the possibility of a radical–radical recombination pathway (not shown), we measured the standard reduction potential (E1/2) of 3-oxetanone (2) using differential pulse voltammetry (DPV).40 We determined an E1/2 value of −2.51 V vs. SCE in CH3CN. In contrast, the redox potentials of 4CzIPN (E1/2[P˙+/P*] = −1.04 V; E1/2 [P/P˙−] = −1.21 V vs. SCE in CH3CN)41 are too small to drive reduction of 3-oxetanone (2) to the corresponding ketyl radical. Accordingly, radical–radical recombination pathways were ruled out for both reaction conditions.
In contrast, in the Cr-mediated reaction, the reduction potentials of 4CzIPN˙− are sufficient to reduce CrIIILn to CrIILn (E1/2 [CrIII/CrII] = −0.51 V vs. SCE in DMF).42 This reduced CrIILn can then intercept the α-amino radical 6 to generate alkyl-Cr intermediate 8, a step that has been extensively investigated in Nozaki–Hiyama–Kishi reaction manifolds,43 which may then add to 3-oxetanone (2) to form Cr alkoxide 10. The reaction may then terminate by protonation to form oxetanol 3a. Alternatively, it is possible that α-amino radical 6 may undergo direct addition to Brønsted acid-activated 3-oxetanone (2) to form radical cation 7, and there is precedent for such 1,2-additions.39,44 Subsequently, photocatalyzed reduction of the radical cation 7 would form oxetanol 3a, also completing the photocatalytic cycle.
Thus, to investigate these two possibilities, we carried out deuterium quenching experiments using the parent substrate N-phenyl glycine (1a) with 3-oxetanone (2) and/or methanol-d (CH3OD) (Table 3). We anticipated that, in the presence of methanol, the alkyl-Cr intermediate 8, but not the corresponding α-amino radical species 6, would be quenched to form the proto(deutero)decarboxylation products 13 (ESI Figure S1†). Under the standard Cr-mediated reaction conditions, we observed 60% of the 3-oxetanol product 3a and 14% protodecarboxylation product 13a (Table 3, entry 1). When 3-oxetanone was omitted and replaced by methanol-d, the yield of the proto/deuterodecarboxylation products 13a, b increased to 59% (combined), with 80% deuterium incorporation (entry 2), consistent with the alkyl-Cr addition pathway. Interestingly, when both 3-oxetanone (2) and methanol-d were included in the reaction, yields of both the 3-oxetanol product 3a and the protodecarboxylation products 13a, b were decreased (entry 3), suggesting that additional undesired reaction pathways become active under these conditions.
Entry | Conditionsa | Electrophile | Quencher | 3a (%) | 13a + 13b (%) |
---|---|---|---|---|---|
a Cr-mediated reaction conditions: 1 mol% 4CzIPN, 5 mol% CrCl3, 0.5 equiv. TMSCl, 1.2 equiv. CsOPiv, 0.8 M in CH3CN based on amino acid substrate 1a, blue LED light, rt, 20 h. Cr-free reaction conditions: 2 mol% 4CzIPN, 1.2 equiv. CsOPiv, 0.5 M in CH2Cl2 based on amino acid substrate 1a, blue LED light, rt, 2 h. b Yields based on 1H-NMR analysis of crude reaction product in the presence of an internal standard, relative to N-phenyl glycine (1a). c Amino acid substrate 1a was deuterium exchanged with CH3OD prior to the reaction. d Percent deuterium incorporation (13b: R = D) shown in parentheses. | |||||
1 | Cr-mediated | 2 (1 equiv.) | — | 60 | 14 |
2 | Cr-mediatedc | — | CH3OD | — | 59 (80)d |
3 | Cr-mediatedc | 2 (1 equiv.) | CH3OD | 48 | 6 (57)d |
4 | Cr-free | 2 (3 equiv.) | — | 60 | 5 |
5 | Cr-freec | — | CH3OD | — | 47 (55)d |
6 | Cr-freec | 2 (3 equiv.) | CH3OD | 100 | — |
In the Cr-free reaction, quenching with methanol-d also resulted in formation of the proto/deuterodecarboxylation products 13a, b (entry 5), consistent with formation of an α-amino carbanion intermediate 9 (Fig. 4 and ESI Figure S1†). In contrast, when both 3-oxetanone (2) and methanol-d were included in the reaction, the yield of the 3-oxetanol product 3a increased to 100% (entry 6). This is contrary to expectation if the standard Cr-free reaction proceeds solely via a carbanion intermediate. Notably, Glorius and coworkers have proposed that photoredox-initiated intermolecular radical trapping by ketones and aldehydes may be promoted by Brønsted-acid activation of the carbonyl compound.39 Thus, the increased yield observed under these conditions (entries 3 and 6) may be attributed to such activation of 3-oxetanone by methanol. Unfortunately, the improved yield observed in Cr-free reaction in the presence of methanol did not prove generalizable to other N-aryl α-amino acid substrates (not shown).
The contrasting results in these competition experiments, in which the reaction conditions are significantly perturbed by omission of the electrophile or addition of a cosolvent, make it difficult to draw definitive conclusions regarding the predominant pathways under the standard Cr-mediated and Cr-free reaction conditions, and suggest that both are possible.
Lastly, we investigated the quantum yields of these transformations. Photon flux of the light source was determined using standard ferrioxalate actinometry.40 The quantum yield was then calculated by determining the amount of product formed in 3 min under the standard reaction conditions, and dividing by the photon flux. We observed quantum yields of 5.2 for the Cr-mediated reaction and 10.3 for the Cr-free reaction, indicative of chain propagation mechanisms under both conditions.
In the context of the Cr-mediated reaction, the reduction potentials of carboxylic acid 1a (E1/2 [1a+/1a] = +0.42 V vs. SCE in CH3CN)36 and CrIIILn (E1/2[CrIII/CrII] = −0.51 V vs. SCE in DMF)42 indicate that direct oxidative decarboxylation of 1a by Cr(III) would be thermodynamically unfavorable, making chain propagation via a redox mechanism unlikely.
An alternative possibility is that the alkyl-Cr species 8 is regenerated via a cycle in which the Cr-alkoxide intermediate 10 reacts with a new equivalent of the carboxylic acid substrate 1a to form Cr-carboxylate 12, which then undergoes metal-mediated decarboxylation to form alkyl-Cr species 8.45,46 Formation of Cr-carboxylate 12 could occur either via direct proton–Cr exchange with carboxylic acid 1a, or via σ-bond metathesis with the corresponding TMS ester, as postulated by Glorius and coworkers in related propagation reactions with trimethylsilylmethylamines,15 with subsequent desilylation of the resultant TMS ether to the product 3a. Consistent with the latter hypothesis, when TMSCl was omitted from the reaction, the quantum yield dropped to 1.6, indicating an important role in the propagation cycle.
In the Cr-free reaction, chain propagation may occur via SET between radical cation 7 and carboxylate 1a− (E1/2 [1a˙/1a−] = +0.42 V vs. SCE in CH3CN)36 to regenerate α-amino radical 6 and furnish 3-oxetanol product 3a. This electron transfer event should be thermodynamically favorable, based on the computationally determined redox potential of an alkoxy radical cation-to-alcohol conversion by Glorius and coworkers.39
Taken together, these results suggest that Cr-mediated reaction proceeds predominantly via the alkyl-Cr addition pathway (8 + 2 → 10), because omission of TMSCl results in a large decrease in quantum yield (5.2 to 1.6), indicating the importance of the Cr-based chain propagation cycle (10 → 12 → 8) compared to the SET chain propagation cycle (7 → 6) (ESI Fig. S2†). In contrast, the Cr-free reaction cannot involve the Cr-based chain propagation cycle (and the free carboxylate analogue of 12 would not decarboxylate spontaneously to form carbanion 9). Thus, the high quantum yield in that reaction (10.3) must be attributed to the SET propagation cycle, which can only arise from the radical addition pathway (6 + 2 → 7). Thus, while both reaction manifolds may be operative to some extent under both conditions, it appears that the Cr-mediated reaction proceeds mainly via the alkyl-Cr pathway and the Cr-free reaction proceeds mainly via the radical addition pathway.
Footnote |
† Electronic supplementary information (ESI) available: Experimental procedures and analytical data for all new compounds. See DOI: https://doi.org/10.1039/d3sc00936j |
This journal is © The Royal Society of Chemistry 2023 |