Deepanshu
Bhatt
ab,
Deepak
Kumar
ab,
Abhay
Sachdev
*ab and
Akash
Deep
*c
aApplied Materials & Instrumentation Division, CSIR-Central Scientific Instruments Organization (CSIR-CSIO), Chandigarh-160030, India. E-mail: abhay.sachdev@csio.res.in
bAcademy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, Uttar Pradesh, India
cInstitute of Nano Science and Technology (INST), Sector-64, Mohali 160062, Punjab, India. E-mail: akashdeep@inst.ac.in
First published on 26th May 2025
Foodborne illnesses pose a significant public health challenge globally. According to WHO estimates, unsafe food causes approximately 600 million cases of foodborne diseases annually. Bacterial pathogens, including E. coli and P. aeruginosa, are significant contributors, causing illnesses ranging from mild gastrointestinal issues to severe, life-threatening conditions. E. coli can lead to severe gastrointestinal diseases, while P. aeruginosa poses risks in high-moisture foods due to its biofilm formation and antimicrobial resistance. Effective detection of these pathogens is vital for ensuring food safety and preventing outbreaks. This study reports the synthesis of a monosaccharide sugar-conjugated Cu-BTC bioprobe for the electrochemical detection of lectin and bacteria via classical carbohydrate-lectin interactions. Cu-BTC was drop casted onto a screen-printed carbon electrode (SPCE) and covalently linked with sugar via carbodiimide chemistry. In this easy-to-synthesize bioprobe, the Cu-BTC metal–organic framework acted as a redox mediator, while the monosaccharide sugar molecules served as bioreceptor elements. The developed 4APM@Cu-BTC/SPCE and 4APG@Cu-BTC/SPCE bioprobes exhibited significant voltammetric responses, achieving detection limits of 2461 CFU per mL and 84.68 CFU per mL towards E. coli and P. aeruginosa, respectively, with a quick response time of <15 min. At the same time, the synthesized bioprobes also proved to be effective in the detection of lectins such as concanavalin A and PA-1. Besides, the covalently bound monosaccharide sugars facilitated the selective interaction of bioprobes with the corresponding analytes while eliciting negligible responses towards common biological interferents. Moreover, the fabricated bioprobes were applied for the detection of bacterial species in spiked milk and juice samples and showed satisfactory recovery percentages of ca. 80–91% and 78–93% for E. coli and P. aeruginosa, respectively. This work provides a new approach for the advancement of a carbohydrate-based electrochemical sensing platform. By eliminating the need for an external redox mediator and utilizing a cost-effective, sensitive, and readily accessible bioreceptor, the sugar-modified Cu-BTC framework offers a promising sensing strategy. Additionally, owing to their in-built non-genetic information and involvement in host–pathogen interaction, carbohydrates can enhance their utility in sensing applications.
Escherichia coli and Pseudomonas aeruginosa are notable for their impact on public health. E. coli, a common commensal of warm-blooded animals, is a significant contributor to foodborne illnesses. While most strains are non-pathogenic, certain variants, such as Shiga toxin-producing E. coli (STEC), can cause severe gastrointestinal illnesses, including haemorrhagic colitis and haemolytic uremic syndrome.2 In contrast, P. aeruginosa, although predominantly associated with nosocomial infections, poses a food safety risk due to its ability to contaminate high-moisture, nutrient-rich foods such as milk, vegetables, and fruits. This bacterium's biofilm-forming capability and inherent antimicrobial resistance make it a critical concern, particularly for immunocompromised individuals.3 The detection of these pathogens is crucial for ensuring food safety and protecting public health. Rapid and accurate identification of these bacteria in food products can prevent outbreaks of foodborne illnesses.
Conventional diagnostic methods like cell culture, polymerase chain reaction (PCR), and immunological methods, while highly specific and sensitive, are often time-consuming, require trained personnel, and follow complex procedures, making them inappropriate for rapid detection.4–6 Therefore, there is a pressing need to develop innovative methods to address the challenges associated with bacterial detection. Among the array of new-age diagnostic methods, electrochemical approaches have emerged as a game-changer in the biosensor industry. Their distinct advantages such as surface phenomenon sensitivity, quick response, stability, ease of deployment, and effortless operation make them surpass traditional methodologies.4,7 These electrochemical methods harness the principles of electrochemistry to detect specific biomolecular interactions, ensuring precision and efficiency in bacterial identification.
In recent years, metal–organic frameworks (MOFs) have garnered significant attention in various biomedical applications such as drug extraction,8,9 wound healing, chemical sensing,10 and biosensing.11,12 MOFs are intrinsically porous materials composed of metal ions or clusters coordinated to organic ligands, resulting in structures with high surface areas, tunable porosity, and diverse surface functionalities. The incorporation of metal cations imparts redox properties to MOFs, facilitating electron movement within the framework and making them highly suitable as transducer materials in biosensors.13,14 These characteristics have been effectively harnessed in the development of MOF-based biosensors for the detection of various biomolecules.15,16 Additionally, MOFs have been employed in signal transduction mechanisms, including optical and electrochemical methods, to detect bacterial interactions, thereby improving the detection limits and response times of biosensors.17 These developments underscore the potential of MOFs to address current challenges in pathogen detection and contribute to the advancement of rapid and accurate diagnostic tools.18
Characteristics like ease of immobilization, high stability, and host-specificity with minimal cross-reactivity are highly desirable for any biorecognition element. Biomolecules such as aptamers, antibodies, and bacteriophages have been extensively utilized in bacterial biosensing.7,19,20 However, due to persisting challenges in synthesis, cost, stability, yield, and storage, alternatives with greater environmental stability and lower mutation rates are gaining popularity, such as carbohydrates. Carbohydrates, the most abundant non-genome encoded organic molecules in the biosphere, possess a vast repertoire of biological information. They exhibit high specificity against their protein counterparts, known as lectins, demonstrating interactions as specific as those observed in antigen–antibody or substrate–enzyme interactions.19 Lectin–carbohydrate interaction plays a vital role in host pathogenesis, allowing the pathogen to interact with the host cell for establishing primary infection.19,21 In light of this knowledge, carbohydrate-based sensing platforms have emerged for the detection of bacterial species (Table S2, ESI†). However, the majority of research in this domain leans towards optical methods and is primarily directed at detecting E. coli. In an innovative approach, Kaushal et al. synthesized glycoconjugate-coated Au nanorods for the photothermal ablation and optical detection of E. coli and P. aeruginosa.22 Subsequently, the same group explored the multiepitope sugar approach for the colorimetric detection and ablation of P. aeruginosa.23 In the realm of electrochemical sensing, Zadeh et al. devised a mannose-based sensor platform on a gold-coated glassy carbon electrode for detecting E. coli.24 Guo et al. combined carbohydrate recognition properties with faradiac electrochemical impedance spectroscopy to develop an impedimetric bioprobe for the detection of E. coli.25
The current study aims to develop an electroactive Cu-BTC MOF for voltammetric detection of both E. coli and P. aeruginosa, utilizing sugar as a bioreceptor moiety. Previously, Cu-BTC has been utilized for electrochemical detection of E. coli; for example, Gupta et al. fabricated an immunosensor using a Cu3(BTC)2-PANI composite for impedimetric detection.26 Herein, PANI served as a redox mediator, while Cu-BTC as a substrate for antibody linkage. However, in the present study, Cu-BTC served dual roles, acting as both a redox mediator and a substrate for the conjugation of monosaccharide sugars. The Cu-BTC MOF was hydrothermally synthesized using triethylamine (TEA) as a modulator, deposited on a screen-printed carbon electrode, and conjugated with monosaccharide sugars. The developed bioprobes, 4APM@Cu-BTC/SPCE and 4APG@Cu-BTC/SPCE, were then assessed for the voltammetric detection of E. coli and P. aeruginosa, respectively. Following the assessment, the bioprobes were evaluated on multiple analytical parameters and were also tested on juice and milk samples. Prior to bacterial spiking, juice and milk samples were diluted in phosphate-buffered saline (PBS) to minimize matrix complexity.
For the sugar quantification, anthrone analysis was employed, which is a qualitative and quantitative test for carbohydrates. In this method, carbohydrates undergo dehydration with concentrated H2SO4 to form furfural, which subsequently undergoes condensation with anthrone, leading to the formation of a green-colored complex measurable spectrophotometrically at 630 nm. In the experiment, the sugar-conjugated Cu-BTC was carefully scraped from the working electrode and mixed with an ice-chilled mixture of 0.2% anthrone prepared in 95% H2SO4. The resulting reaction mixture was incubated for 10 minutes in a water bath, and then cooled to room temperature, and the absorbance was recorded at 630 nm.
The mannose conjugated bioprobe (4APM@Cu-BTC/SPCE) was used for detecting E. coli and Concanavalin A (ConA) lectin. It was incubated with 10 μL of varied concentrations of ConA (ranging from 10 ng mL−1 to 80 ng mL−1) and E. coli (ranging from 105 CFU per mL to 1010 CFU per mL) for 5 minutes at room temperature (RT), separately. Conversely, the galactose-conjugated bioprobe (4APG@Cu-BTC/SPCE) was incubated with 10 μL of varied concentrations of PA-1 lectin (ranging from 10 ng mL−1 to 100 ng mL−1) and P. aeruginosa (ranging from 1 CFU per mL to 107 CFU per mL) for 5 min at RT, independently. Post incubation, the working electrode of SPCE was rinsed with 0.1 M PBS (pH 7.4) buffer to remove any unbound analyte and air-dried at room temperature. Finally, DPV measurements were conducted on each electrode in the presence of 0.1 M PBS (pH 7.4) electrolyte, as specified above.
Further, FTIR studies were carried out to ascertain the presence of functional groups and chemical bonds (Fig. 1(b)). The characteristic peak from 1300 to 1600 cm−1 was attributed to the symmetric and asymmetric vibrations of the carboxylate (COO–) group of the BTC ligand. The peak at 730 and 750 cm−1 corresponded to the in-plane C–H bending mode,38 while the peak at 470 cm−1 was associated with the vibrational mode of the Cu–O bond. An additional peak was observed at 1700 cm−1 in Cu-BTC, indicating the presence of free –COOH groups in the structure, suggesting partial conjugation of H3BTC (Fig. 1(b)). These findings typically align with the coordination sphere of six-prismatic crystals,39 suggesting that the H3BTC exhibits partial participation in the six-prismatic crystal and the interaction between the linker and metal ions is rather asymmetrical.39 The FTIR analysis of sugar conjugated Cu-BTC was performed by carefully scraping the material from the electrode surface. The scraped material was then ground with potassium bromide (KBr, an IR-inactive material), compressed into a transparent pellet under high pressure, and subsequently analyzed using a pellet holder accessory. In the sugar-conjugated Cu-BTC, the peak at 1700 cm−1 was attenuated due to the amide bond formation between the free –COOH of the framework and –NH2 groups of the sugar moieties. This amide linkage augments the –C–N bonds in the Cu-BTC, leading to an increment in peak intensity between 1170 and 940 cm−1. Additionally, the peak became more distinct and showed broadening, indicative of an –NH loop in the structure. Furthermore, a separate peak corresponding to the amide II appeared at 1509 cm−1 (ref. 19) in the carbohydrate conjugated Cu-BTC. Thus, the FTIR studies concluded the successful bond linkages and the presence of functional groups in the conjugated and non-conjugated Cu-BTC.
XRD was performed to assess the crystal structure of Cu-BTC (Fig. 1(c)). The characteristic 2θ peaks observed at 6.7°, 9.5°, 11.78°, 13.5°, 16.5°, 17.5°, 19.1°, and 26° corresponded to the (200), (220), (222), (400), (422), (333), (440), and (355) miller indices, respectively (Fig. 1(c)). The obtained XRD pattern matched with the reported COD databases (4002051 and 7107291), thereby confirming the formation of Cu-BTC.29 The sharp peaks in the diffraction pattern suggested the crystallinity of the synthesized Cu-BTC, while low-intensity peaks at higher 2θ values were attributed to the incidental formation of Cu2O. The X-ray diffraction (XRD) pattern of the sugar-conjugated Cu-BTC (Sugar@Cu-BTC), presented in Fig. S1 (ESI†), closely resembled that of the unmodified Cu-BTC. This indicated the retention of the characteristic diffraction peaks and crystallinity in sugar-conjugated Cu-BTC. Additionally, a broad hump was observed in the sugar-conjugated CuBTC, indicative of the amorphous nature of the sugar component.40,41 This suggests its successful incorporation into the conjugate without affecting the crystalline characteristics of the framework. Moreover, FTIR analysis suggested that the sugar conjugation occurred primarily via the free COOH groups of the Cu-BTC framework and these groups do not participate in the coordination structure of the MOF, thus maintaining the structural integrity of the framework. These observations collectively confirm that the structural integrity, bonding, and crystallinity of the Cu-BTC framework were preserved upon sugar conjugation.
Next, thermal analysis of Cu-BTC and sugar conjugated Cu-BTC was carried out to evaluate the temperature stability using a thermogravimetric analyser (TGA), which predicted a two-step degradation process42 (Fig. 1(d)). Initially, a weight loss of 20–25% (approx.) was observed in the temperature range of 80–130 °C, attributed to the removal of physically adsorbed solvents such as water and ethanol from the pores of the MOF.43 There was no notable weight loss observed thereafter until 400 °C.39,44–46 The weight loss further increased to ∼60% around 420 °C, corresponding to the decomposition of the secondary building unit and BTC-ligand framework of MOF. The above results confirmed the structural stability of Cu-BTC up to 400 °C. However, beyond this temperature, the structure collapsed due to the decomposition of the building units. Both pristine and sugar conjugated Cu-BTC (Fig. S2, ESI†) exhibited a similar degradation pattern.
Lastly, the morphological and elemental analysis of Cu-BTC and sugar conjugated Cu-BTC was carried out using scanning electron microscopy (Fig. 2 and Fig. S3, ESI†) and EDAX, respectively. Cu-BTC exhibited a well-defined rod-like flaky 3D structure.47 The observed morphology closely resembles that of a six-prismatic crystal, with the rod length and width ranging from 1 to 5 μm and 0.5 to 1 μm, respectively.39,45 Such materials exhibiting a rod-like morphology offer advantages for charge carriers due to their aspect ratio, polydispersity, and orientation.42 EDAX analysis confirmed the presence of constituent elements, i.e., copper, oxygen, and carbon atoms, in the Cu-BTC structure (Fig. 2(e)). In the case of sugar-conjugated Cu-BTC, the material retained a morphology similar to that of the pristine MOF (Fig. S3(a) and (b), ESI†), indicating that the conjugation process did not alter the structural morphology of Cu-BTC. The conjugation was confined to the surface-exposed –COOH functional groups, resulting in a low-density surface modification. Owing to the limited extent and spatial distribution of the conjugated sugar moieties, SEM–EDX analysis did not reveal any distinct elemental differences between the conjugated and pristine Cu-BTC samples, with both exhibiting comparable elemental compositions. Additionally, DLS was utilized to determine the size distribution and diameter of Cu-BTC, revealing an average diameter of approximately 1.14 μm (Fig. S4, ESI†). The findings obtained from DLS were consistent with SEM observations.
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Fig. 2 (a)–(d) Scanning electron microscopy images of Cu-BTC at different magnifications (200 nm, 500 nm, 1 μm, and 2 μm). (e) Elemental analysis data of Cu-BTC. |
Screen-printed carbon electrodes (SPCEs) often require activation before being used in biosensing experiments to ensure that they perform optimally. Prior to Cu-BTC deposition, the SPCEs were electrochemically activated with H2O2. This process typically enhanced the electrode's electrochemical properties by improving the surface smoothness and increasing the surface area for efficient electron transfer. Consequently, it facilitated better material adherence and improved the sensor's performance in sensing applications.50,51 Following activation, Cu-BTC was deposited onto the working electrode of the SPCE using NMP as the solvent and PVDF as the binder (Scheme 2). NMP, being an organic solvent, facilitated the dispersion of the Cu-BTC and PVDF mixture, while its low volatility provided sufficient time for deposition. PVDF assisted in the adhesion of Cu-BTC to the electrode surface. However, being insulative in nature, its concentration in the mixture was maintained at only 10%.
The Cu-BTC worked as an electrochemically conductive transducer element. CV of the bare SPCE and Cu-BTC-modified SPCE was recorded in 0.1 M PBS (pH 7.4) and K4Fe(CN)6·3H2O + KNO3 in PBS (pH 7.4) at a scan rate of 50 mV s−1 (ref. 27–29) (Fig. 3 and Fig. S6, ESI†). The bare SPCE exhibited no significant faradiac redox activity. However, Cu-BTC/SPCE displayed well-defined redox behavior, showing two redox pairs with high faradiac current and peak-to-peak separations (ΔE1p and ΔE2p) of approximately 380.2 mV and 228.6 mV, respectively (Fig. 3(a)). The redox pair of O1–R1 (Fig. 3(a)) and O1′–R1′ (Fig. S6(a), ESI†) represents the oxidation and reduction of Cu ions from Cu(0) to Cu(I) and vice versa. On the other hand, the redox pair of O2–R2 (Fig. 3(a)) and O2′–R2′ (Fig. S6(a), ESI†) shows the conversion from the Cu(I) to Cu(II) oxidation state and vice versa, in PBS and Ferro electrolyte, respectively. Briefly, the CV profiles of Cu-BTC/SPCE in PBS buffer were attributed to the following reactions,28 demonstrating the electrochemical activity of Cu-BTC on the SPCE substrate.
Cu(0) ↔ Cu(I) + e− (−9.5 mV, E1pa/−389.7 mV, E1pc) |
Cu(I) ↔ Cu(II) + e− (135.7 mV E2pa,/−92.9 mV, E2pc) |
The electrochemical reaction mechanism was investigated by studying the effect of scan rate on the Cu-BTC. In both electrolytes, oxidation (O1/1′, O2/2′) and reduction peak currents (R1/1′, R2/2′) increased proportionally with the scan rate, displaying a linear correlation with the square root of the scan rate (Fig. 3(b), (c) and Fig. S6(b), (c), ESI†). This observed electrochemical behavior (viz. linear correlation between scan rate and reduction/oxidation peak currents) can be attributed to the diffusion-controlled faradiac response occurring within the metal–organic framework via the redox hopping process. Redox hopping, a Cottrell-like behavior, is a dominant charge transfer mechanism found in several polymeric structures, including MOFs. In this process, electronic movement within the framework occurs via self-exchange reactions between redox centers coupled with the motion of counter-balancing ions.29,52 The diffusion-controlled kinetics, inferred from the linear relationship, followed the following oxidative regression equations in respective electrolytes:
PBS electrolyte: ipa = 9.16v + 68.55 (R2 = 0.9881) (Fig. 3(c)) |
Ferro electrolyte: ipa = 52.2v + 49.43 (R2 = 0.9848) (Fig. S3(c), ESI†) |
On the other hand, a shift in peak potential was noticed in the ferro electrolyte for the second redox pair (O2′–R2′) of Cu-BTC (Fig. S6(a), ESI†). This was attributed to the interference of the ferro electrolyte with the inherent conductivity of the MOF. The redox characteristics of the ferro electrolyte overlapped with those of the second redox pair of Cu-BTC, and due to its high conductivity, it amplified the second oxidation and reduction peaks (O2′–R2′) of Cu-BTC. Due to the above reasons as well as the degradative effect of the ferro electrolyte towards biomolecules, all biosensing experiments were carried out in 0.1 M PBS (pH 7.4).
The resultant bioprobe facilitated the electrochemical biosensing of bacterial species and their lectin proteins via specific binding interactions. The mechanism behind biosensing lies in the lectin–carbohydrate interaction. Lectins are non-immune proteins with specific saccharide recognition sites that recognize and bind carbohydrates protruding from the surface of other cells. This interaction, akin to antigen–antibody or enzyme–substrate interactions, plays a crucial role in microbial pathogenesis. Structural studies have identified carbohydrate recognition domains (CRDs) in lectins, which are responsible for their carbohydrate-binding activity and can also discriminate between anomeric isomers of carbohydrates based on their specificities.55 For example, the Con A lectin specifically binds to the a-anomer of glucose and mannose, but not to the b-anomer of either.56
In this study, the model organisms E. coli and P. aeruginosa bind to the mannose and galactose bio-probes through the FimH and PA-1 lectins present on their surface, respectively.19 The carbohydrates were conjugated on the Cu-BTC/SPCE through carbodiimide chemistry, leading to the formation of two abovementioned bacterial species-specific bioprobes: 4APM@Cu-BTC/SPCE and 4APG@Cu-BTC/SPCE (Scheme 3). Further, these bioprobes were utilized for the voltammetric (DPV) detection of bacterial species (E. coli and P. aeruginosa) and lectins (Con A and PA-1) under the optimized conditions. In this procedure, the bioprobes were exposed to the respective analytes for 5 min and subsequently rinsed with PBS buffer to eliminate any loosely bound analyte. Following this step, the electrolyte was introduced, and after 10 min, a consistent response was observed. Both bioprobes exhibited current saturation within 10 min of adding the electrolyte, indicating a stable and repeatable behavior (Fig. S7, ESI†). The data also indicated that a minimum of 5 min was necessary for the electrolyte to reach equilibrium and produce a stable current response. Taking this into consideration, along with the incubation time for bacteria, it was determined that the bioprobes required only 10–15 minutes to generate a reliable sensing response. The peak current of 4APM@Cu-BTC/SPCE and 4APG@Cu-BTC/SPCE decreased linearly with the increase in the concentration of E. coli (Fig. 4(a) and (c)) and P. aeruginosa (Fig. 4(b) and (d)), respectively. The mannose bioprobe showed a detection range of 105 to 1010 CFU per mL with a LOD of 2461 CFU per mL, whereas 4APG@Cu-BTC/SPCE demonstrated a detection range from 1 to 107 CFU per mL with a LOD of 84.68 CFU per mL (Table S2, ESI†). A similar response was obtained for the detection of Con A and PA-1 lectins (Fig. S8 and Table S2, ESI†). The differential pulse voltammetry (DPV) technique is preferred for analytical purposes owing to its sensitivity and ability to distinguish between faradiac and non-faradiac currents. Its differential nature and shorter pulse time enhance measured currents and provide a high signal-to-noise ratio, even with minimal analyte volume.29,57
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Scheme 3 Conjugation of monosaccharide sugars on the Cu-BTC deposited SPCE using carbodiimide chemistry. |
Post-sugar conjugation, the DPV response of the Cu-BTC decreased due to the hindrance of electronic flow. A similar response was obtained when the bioprobes interacted with the respective analyte: bacteria or lectin protein. The binding of the analyte resulted in the formation of an additional biomolecular layer over the bioprobe, leading to a decrement in the current signal due to the suppression of ionic transport across the electrode–electrolyte interface. The sensing mechanism is predominantly a surface-based resistive phenomenon, wherein Cu-BTC functions as a transducer. The modifications occurring on the Cu-BTC surface due to sugar conjugation and subsequent analyte binding resulted in the reduction of conductivity within the Cu-BTC framework. Cu-BTC not only provided the functional carboxyl (–COOH) groups for carbohydrate conjugation but also demonstrated intrinsic electrochemical activity due to the presence of Cu2+ ions. Its electrochemical activity enabled the transduction of carbohydrate–lectin and carbohydrate–bacteria interactions into measurable signals. Furthermore, its stability across different pH conditions ensured that the electrochemical response remained unaffected, with no disruption in the oxidation peak. Biomolecules, being non-conductive (∼10−7 S m−1 for the bacterial cell membrane58), cause steric hindrance to electron flow on the electrode surface, leading to a decrease in faradaic currents.26,59 As their concentration increases, the effective area of the electrode decreases, leading to a decrease in current, attributed to the hindrance in interfacial electron transfer kinetics.58
Most bacterial sensing probes have been evaluated primarily for their selectivity against other bacterial species, with limited studies assessing their specificity against non-bacterial biomolecules. In contrast, the present study not only demonstrates selectivity against non-target bacterial species but also evaluates the probes’ response to other biomolecules, providing a more comprehensive assessment of specificity. When compared to existing studies, the developed bioprobes exhibit a comparable level of selectivity against non-target bacterial species, even at high analyte concentrations, while maintaining minimal and consistent standard deviation in recorded responses. For instance, the aptasensor developed by Shahrokhian and Ranjbar for Escherichia coli detection demonstrated selectivity against four bacterial species, including Staphylococcus aureus and Pseudomonas aeruginosa, though with variable standard deviations. Furthermore, while significant selectivity was observed, the response varied among different E. coli strains, with the lowest signal for E. coli DH5α and the highest for E. coli E23.6 Similarly, in another study from the same research group, an aptasensor developed for P. aeruginosa detection exhibited selective recognition of four bacterial strains with a comparable specificity pattern, albeit with variable standard deviations.60
Comparable selectivity trends have been reported in other studies for the detection of E. coli and P. aeruginosa. While some studies, including the present work, have assessed selectivity against two or three bacterial species,26,61,62 others have evaluated a broader range. For instance, Viswanath et al. developed a ZIF-8-based immunosensor for P. aeruginosa detection and validated its selectivity against eight bacterial species.63 Despite variations in the number of bacterial strains tested across studies, all reported similar selectivity trends. However, the present study uniquely demonstrates not only high selectivity but also significantly lower and more consistent standard deviation in the selectivity data—an aspect not commonly observed in previous reports. In prior studies, either high selectivity was achieved with considerable standard deviation, or vice versa. In contrast, the developed bioprobes exhibit both robust selectivity and minimal variability, highlighting their reliability and reproducibility in bacterial detection applications.
The sensing and selectivity studies were conducted for non-pathogenic bacterial strains and did not include evaluations across different strains of each bacterium. The strain specificity of a bacterium toward a carbohydrate largely depends on the expression of its respective surface lectins. These lectins, being critical for pathogenesis, are typically expressed at higher levels in pathogenic strains compared to non-pathogenic ones.64,65 Accordingly, it was anticipated that the synthesized bioprobes will exhibit higher sensitivity towards pathogenic strains. While the bioprobes demonstrate specificity in their interactions, there remains the potential for cross-reactivity with bacteria expressing similar types of lectins. For example, FimH, a mannose-specific lectin present in Gram-negative bacteria such as Escherichia coli, Klebsiella pneumoniae, and Salmonella enterica, interacts with mannose carbohydrates.65,66E. coli exhibits strong binding to single mannose residues at the terminal position of glycan chains, whereas K. pneumoniae preferentially binds to mannose residues in complex glycan structures. Similarly, S. enterica interacts with mannose in a manner akin to E. coli but with reduced binding affinity.64,65 Given that the 4APM@Cu-BTC/SPCE bioprobe possesses mannose as the recognition element, it is capable of detecting bacteria expressing FimH lectins. However, due to the relatively weaker interaction of FimH in K. pneumoniae and S. enterica with single mannose residues, the sensing response for these species may be less pronounced compared to that for E. coli. Furthermore, the weaker binding may result in bacterial loss during washing steps, further reducing sensitivity. In conclusion, while it remains uncertain whether the bioprobes demonstrate strain specificity or bacterial cross-reactivity, the results indicate a measurable affinity for the targeted bacterial species.
The practicality of the prepared bioprobes was demonstrated by evaluating them for the detection of respective bacterial species in fresh juice and milk samples. Initially, the samples were diluted tenfold with 0.1 M PBS buffer and then spiked with bacterial concentrations of 100 CFU per mL, respectively. Post-incubation, the recovery percentage relative to the positive control was calculated. E. coli showed recovery percentages of 79.8% and 90.43%, while P. aeruginosa exhibited recovery percentages of 77.72% and 92.7% in spiked juice and milk samples, respectively (Table 1). The CFU per mL count of spiked samples was validated through standard UV-visible spectroscopy, resulting in a recovery percentage that was consistent with the results of the electrochemical technique (Table 2).
Bioprobe | Sample | Bacteria | Spiked value (CFU per mL) | Obtained valuea (CFU per mL) | Recoveryb (%) | Validation recovery (%) |
---|---|---|---|---|---|---|
a Bacterial concentration after incubation at 37 °C. b Recovery percentage relative to the final incubated concentration of the positive sample. | ||||||
4APM@Cu-BTC/SPCE | Nutrient broth | E. coli | 100 | 21.0 × 104 | ||
Milk | 100 | 19.1 × 104 | 90.43 | 92.17 | ||
Fresh juice | 100 | 16.7 × 104 | 79.8 | 80.72 | ||
4APG@Cu-BTC/SPCE | Nutrient broth | P. aeruginosa | 100 | 8.17 × 103 | ||
Milk | 100 | 7.57 × 103 | 92.7 | 93.77 | ||
Fresh juice | 100 | 6.35 × 103 | 77.72 | 78.71 |
Sr. no. | Bioprobe | Sensing technique | Limit of detection | Linear range | Incubation time | Ref. |
---|---|---|---|---|---|---|
Apt = aptamer, Ab = antibody, PEDOT = poly(3,4-ethylenedioxythiophene), COF = covalent organic framework, PANI = polyaniline, MWCNTs = multi-walled carbon nanotubes, DNA = deoxyribonucleic acid, AgNP = silver nanoparticle, ZIF = zeolitic imidazolate framework, BTC = benzene tricarboxylic acid, PEI = polyethylenimine, MIL = materials of institute lavoisier, MPBA = 4-mercaptophenylboronic acid, EIS = electrochemical impedance spectroscopy, ECL = electrochemiluminescence, DPV = differential pulse voltammetry, SWV = square wave voltammetry, AuNP = gold nanoparticle, MOF = metal organic framework, and CFU = colony forming unit. | ||||||
E. coli | ||||||
1 | Apt@PANI/Cu3(BTC)2 | DPV | 2 CFU per mL | 2.1 × (101 to 107) CFU per mL | 20 min | 6 |
2 | Ru-ConA@NH2-MIL-53(Al) | ECL | 16 cells per mL | (50–5.0) × 104 cells per mL | 60 min | 68 |
3 | Apt@Ti3C2Tx and SZr-FcMOF/AuNPs/4-MPBA | DPV | 3 CFU per mL | 10–105 CFU per mL | 1.5 hours | 67 |
4 | Ab@PEDOT/MIL-53(Fe) | EIS | 4 CFU per mL | 2.1 × (102 to 108) CFU per mL | 10 min | 61 |
5 | Apt@polyMn-MOF | DPV | 3.5 CFU per mL | 10–108 CFU per mL | 40 min | 69 |
6 | Ab@m-COF | SWV | 3 CFU per mL | 10–108 CFU per mL | 20 min | 70 |
7 | Ab@PEI/CdS/ZIF-8 | DPV | 3 CFU per mL | 10–108 CFU per mL | 1 hour | 62 |
8 | Ab@PANI/Cu3(BTC)2 | EIS | 2 CFU per mL | 2 × (100 to 108) CFU per mL | 10 min | 26 |
9 | 4APM@Cu-BTC | DPV | 2461 CFU per mL | 10 5 to 10 10 CFU per mL | 10 min | This work |
P. aeruginosa | ||||||
10 | Fc-GO/Apt@ZIF-8 | DPV | 1 CFU per mL | 1.2 × (101 to 107) CFU per mL | 1.5 hours | 60 |
11 | Cu-ZrMOF@Apt@DNA | DPV | 2 CFU per mL | 10–106 CFU per mL | <2 hours | 71 |
12 | Apt@MIL-101(Cr)/MWCNT and Apt/AgNPs/c-g-C3N4 | DPV | 1 CFU per mL | 10–107 CFU per mL | <1.5 hours | 72 |
13 | Ab@ZIF-8/AuNPs | SWV | 3.53 CFU per mL | 10–105 CFU per mL | 30 min | 63 |
14 | 4APG@Cu-BTC | DPV | 84.68 CFU per mL | 1 to 10 7 CFU per mL | 10 min | This work |
The analytical performance of the presented bioprobes was compared with previously reported methods. It is evident from Table 2 that antibodies and aptamers have been mostly explored as biorecognition elements for MOF-based electrochemical biosensing. For instance, Shahrokhian and Ranjbar reported an electrochemical aptasensor for E. coli using a MOF/PANI hybrid nanocomposite. Despite employing electrochemically active polyaniline, methylene blue was utilized as an electroactive indicator for bacterial detection.6 A similar approach was adopted for P. aeruginosa detection, where ferrocene-graphene oxide (Fc-GO) and zeolitic imidazolate framework-8 (ZIF-8) served as the electroactive indicator and immobilization platform, respectively.60 Some reports have described sandwich assay-based biosensing, where the analyte is sandwiched between two different transducer molecules, with one working as electrode modifier and the other as an electroactive indicator. For example, Dai et al. developed a Faraday-cage-type aptasensor by sandwiching E. coli between a MXene and Fc-MOF.67
The sensing systems reported previously entail numerous components and require multistep synthesis, rendering them laborious, expensive, and time-consuming. Furthermore, traditional bio-receptors like aptamers and antibodies present challenges in terms of synthesis, compound purity, environmental stability, and storage and usage conditions, adding to the complexity and labor intensiveness. On the contrary, the transducer material synthesized in this study offers inherent functionality and electroactivity. In addition, the bioprobes developed in this study are simpler to synthesize and easy to operate and possess shorter incubation and detection times with reasonably low and manageable detection limits.
Footnote |
† Electronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d4nj04605f |
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