Tingting
Weng
a,
Daniel
DeBrincat
b,
Vaida
Arcisauskaite
b and
John E.
McGrady
*b
aDepartment of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, China. E-mail: titi@mail.ustc.edu.cn; Fax: +86 0594 3393225; Tel: +86 1878 8836368
bDepartment of Chemistry, University of Oxford, South Parks Road, Oxford, OX1 3QR, UK. E-mail: john.mcgrady@chem.ox.ac.uk; Fax: +44 (0)186 5272; Tel: +44 (0)1865 272645
First published on 5th May 2014
Heterometallic chains have been proposed as potential current rectifiers in molecular electronics, their left–right asymmetry providing, at least in principle, a mechanism for differentiation of current flow in forward and reverse directions. Here we compare two known extended metal atom chains (EMACs), Ru2Ni(dpa)4(NCS)2 and Ru2Cu(dpa)4(NCS)2, both of which meet the first criterion for rectification in so much as they are physically asymmetric. In both cases the dominant transport channel is a doubly degenerate π* orbital localised, to a first approximation, on the Ru2 unit. As a result, current is limited by tunnelling across the Au–SCN–Ni/Cu junction. The paramagnetic Ni centre tunes the left–right delocalisation of the channel, making the minority-spin (β) channel more transparent than its spin-α counterpart and this difference provides the basis for asymmetry in the current under forward and reverse bias.
In the seminal 1974 paper15 where they identified the potential rectifying properties of the Donor–bridge-Acceptor (D–σ-A or D–π-A) architecture (Fig. 1, left), Aviram and Ratner argued that under applied bias electrons should flow preferentially from the source electrode to the vacant LUMO on the acceptor to the (filled) HOMO of the donor and finally to the drain electrode (the ‘Aviram–Ratner direction’). If the acceptor and donor are identified with the p- and n-doped regions of the semiconductor, then this implies the opposite direction for facile electron transport to that observed in a p–n junction (i.e. from electron-poor to electron-rich regions). Indeed a later study of the Aviram–Ratner diode using density functional theory suggested that the potential drop was localised at the electrode–molecule interface, and the computed rectification ratio was low.2 The Aviram–Ratner architecture shown in Fig. 1 (left) has not been realised synthetically but a number of closely related D–σ-A and D–π-A triads (Fig. 1, right, for example)4,5 have show rectification ratios of up to 60, albeit with preferential electron flow from the donor to the acceptor: i.e. in the ‘anti Aviram–Ratner’ direction.4a This direction of electron flow can be understood in terms of the strength of coupling of the donor and acceptor groups to the electrodes: i.e. the extent to which the orbitals localised on these two units follow the potential of the source or drain. In Aviram and Ratner's model, the Fermi levels of the electrodes are raised or lowered relative to fixed HOMO (D) or LUMO (A) energies, with the result that electrons flow in the A→D direction (Fig. 1, left). If, in contrast, the HOMO of the donor and the LUMO of the acceptor are strongly coupled to their neighbouring electrodes, the HOMO of the donor can be driven above the LUMO of the acceptor and electron flow is then in the anti Aviram–Ratner direction (Fig. 1, right). These bias-induced shifts in zeroth-order energy levels can lead to dramatic changes in left–right delocalisation of the channel, particularly when the levels come into resonance.
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| Fig. 1 Current flow in the Aviram–Ratner (left) and anti-Aviram–Ratner directions in molecular rectifiers. | ||
Much of the recent progress in molecular electronics has come in the context of organic systems where a conjugated π system provides the dominant transport channel. However arrays of transition metal ions have much to offer,16 not least because the relative lability of the coordinate bond provides a potent tool for custom design of molecules. The so-called Extended Metal Atom Chains (EMACs), arrays of transition metal ions supported by polydentate ligands, are a case in point: advances in synthetic technique mean that it is now possible to vary systematically both their length (3–11 metal atoms) and composition.17 The major barrier to the full exploitation of these systems is the lack of clear correlations between structure and function, function in this case being the ability to support current flow. Such models are relatively well established in organic electronics where the relationship between the properties of the frontier π orbital domain and current flow is well understood.18,19 The situation is less clear-cut in transition metal ions because the generally poor d–d overlap and strong electron–electron repulsions can lead to a densely populated window around the Fermi level. Systematic trends in conductance have begun to emerge through the experimental measurements of Peng, Hsien and co-workers, who have established its dependence on composition (Cr3, Co3, Ni3, Ru3),20 on chain length (M3, M5)21 and also on the valency of the metals ([Ni5]10+, [Ni5]8+).22 At the same time we23 and others24–26 have begun to explore these properties from a theoretical perspective.
In this paper we address a simple question: what electronic features of an extended metal atom chain do we need to take into account when designing an effective molecular rectifier? As a platform for this study we choose a pair of molecules, Ru2Ni(dpa)4(NCS)2 and Ru2Cu(dpa)4(NCS)2 shown in Fig. 2 (dpa = dipyridylamido), the chloride-capped analogues of which have been synthesised by Peng and co-workers.27 The authors noted that both molecules meet the first requirement of rectification, in so much as they are obviously asymmetric. Moreover, they are somewhat unusual in the context of EMAC chemistry in that their ground states are best formulated as {Ru2}5+ M1+ (M = Ni, Cu) rather than the more common isovalent {M2+}3. The charge separation reflects the substantial electronic differences between late first row (Ni, Cu) and mid second row (Ru) transition metal ions, and suggests that the molecular orbitals should be spatially localised on one side or the other. This, in turn, should offer the potential for substantial current rectification, but which of the two is more effective?
28 package. A double-ζ Slater-type basis set, extended with a single polarization function (DZP) was used to describe the main group atoms, while ruthenium, copper and nickel were modeled with a triple-ζ basis set with a single polarization function (TZP). Electrons in orbitals up to and including 1s {C, N}, 2p {S}, 2p {Ni, Cu} and 3d {Ru} were considered part of the core and treated in accordance with the frozen core approximation. The local density approximation was employed for the optimizations,29 along with the local exchange–correlation potential of Vosko, Wilk and Nusair30 and gradient corrections to exchange and correlation proposed by Perdew, Becke and Ernzerhof (PBE).31 Scalar relativistic effects were introduced through the zeroth order relativistic approximation (ZORA). Different configurations were defined using the ‘occupations’ key. Transport calculations were performed with the ATK12.8.2
32,33 package using the LDA functional with the self-interaction correction (SIC) of Perdew and Zunger (LSDA.PZ).34 The methodology combines a density functional theory treatment of the electronic structure with the Keldysh non-equilibrium Green's function approach to simulating coherent transport.35 The scattering region contained the EMAC sandwiched between 6 × 6 layer of the Au (111) surface of the source and the drain, respectively. The sulfur atoms of the two NCS− ligands are located in a hollow site on the Au (111) surface with Au–S distance 2.52 Å. The precise details of the contact geometry remain a significant issue in all transport calculations – the ‘hollow-site’ geometry with a gold–sulfur distance of 2.52 Å (corresponding to a distance of ∼1.9 Å between the sulfur and the surface) adopted here has been established as the global minimum for many examples of sulfur coordination to Au (111)36 and is used in the majority of comparative studies.37 A double-ζ basis set, extended with single polarization function (DZP) was used to describe all atoms except gold which was modelled using a single-ζ basis set, extended with single polarization function (SZP). Core electrons were described by norm-conserving pseudopotentials.38 The electronic structure of the two-probe systems at equilibrium was converged using a 100 Ry mesh cut-off, finite temperature of 300 K at the electrodes. Sampling of the Brillouin zone was performed using a Monkhorst–Pack grid39 with 100 k-points along the transport direction. In the calculation of the transmission spectra and currents, a 5 × 5 grid was used to sample the Brillouin zone, and the bias window was sampled at 0.01 eV intervals. The initial spin density for the two-probe calculations was polarized to be consistent with the net spin densities of the isolated molecules in their gas phase ground states. A full set of Cartesian coordinates for the two-probe system is provided in the ESI (Table S1†).
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| Fig. 3 Comparison of the frontier Kohn–Sham orbitals (a) for Ru2Ni(dpa)4(NCS)2 and (b) for Ru2Cu(dpa)4(NCS)2. Contour plots are shown for the Ru2Ni(dpa)4(NCS)2 case. | ||
| M–Ruc | Ruc–Rut | θ | M–N | Ruc–N | Rut–N | Q(M) | Q(Ruc) | Q(Rut) | ρ(M) | ρ(Ruc) | ρ(Rut) | E/eV | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a The terminal Ru and Ni positions in this data set could not be distinguished: the authors note that actual uncertainties in bond lengths are likely to be much higher. b This value represents the average of four distinct Cu–N bond lengths varying between 2.126 and 2.226 Å. | |||||||||||||
| Ru2Ni(dpa)4(NCS)2 (C4v) | 2.43 | 2.37 | 180 | 4 × 2.12 | 4 × 2.06 | 4 × 2.11 | 0.45 | 1.38 | 1.19 | 1.08 | 1.28 | 0.82 | 0.0 |
| Ru2Ni(dpa)4(NCS)2 (C1) | 2.43 | 2.38 | 172.5 | 2.06–2.22 | 2.03–2.09 | 2.08–2.14 | 0.47 | 1.37 | 1.20 | 1.17 | 1.23 | 0.75 | −0.05 |
| Ru2Ni(dpa)4Cl2a | 2.349(5) | 2.341(4) | 180 | 2.102(3) | 2.012(3) | 2.106(3) | |||||||
| Ru2Cu(dpa)4(NCS)2 (C4) | 2.58 | 2.35 | 180 | 4 × 2.23 | 4 × 2.06 | 4 × 2.11 | 0.29 | 1.47 | 1.20 | 0.16 | 1.35 | 0.86 | 0.0 |
| Ru2Cu(dpa)4Cl2 | 2.575(3) | 2.246(3) | 180 | 2.173(6)b | 2.046(2) | 2.136(4) | |||||||
The tendency for the Ru2Ni(dpa)4(NCS)2 species to bend can be traced to the energetic proximity of the occupied σnbβ orbital to the vacant π*β: removing the axial symmetry allows the two to mix, further stabilising the lower-lying orbital (a second order Jahn–Teller distortion). The bending of the Ru2Ni framework also introduces a significant variation in the Ni–N bond lengths (computed values vary between 2.06 and 2.22 Å). It is difficult to validate the prediction of bending against experimental data due to the disorder in the crystal structure of Ru2Ni(dpa)4(Cl)2, but it is possible that the bending is in fact the source of the disorder. What is clear is that the closely related homometallic Ru3 chains are strongly bent for all but the most electron donating terminal ligands, and for very similar electronic reasons.23d
Turning to the copper analogue Ru2Cu(dpa)4(NCS)2, the Cu 3d manifold is now stabilised (relative to Ni) due to the increase in effective nuclear charge and both spin components of the Cu–N σ* orbital are now occupied (Cu1+, d10). This has several consequences for the molecular orbital array, the most obvious being that the distinction between the spin-α and spin-β components of Cu dxz/yz is much reduced compared to Ru2Ni(dpa)4(NCS)2. Moreover, the σnb orbital, with similar amplitudes on Cu and Rut, is stabilised relative to the Ru–Ru π* and δ* orbitals which have only relatively minor contributions from the heterometal. The increased σnb–π* separation reduces the driving force for the bending distortion, and in fact we have been unable to locate a bent local minimum in the Ru2Cu(dpa)4(NCS)2 case: all attempts reverted back to the linear structure. This observation is consistent with the fact that disorder problems were less acute in the crystal structure determination in this case, although the residual variation within the experimental Cu–N bond lengths (2.126–2.226 Å) suggests that the potential energy surface for the bending remains flat.
The electronic structure model developed for the gas phase persists in the device configuration where the molecules are supported between the (111) faces of two bulk gold electrodes (Fig. 4(a and b)). The Mulliken spin densities on the metal centres in Ru2Ni(dpa)4(NCS)2, for example, are very similar to those in the gas-phase (1.15, 1.22 and 0.66 for Ni, Ruc and Rut, respectively compared to values of 1.08, 1.28 and 0.82 in Table 1). The zero-bias transmission spectrum of Ru2Ni(dpa)4(NCS)2 shown in Fig. 4(a) further emphasises the close relationship between the molecule in isolation and in situ between the electrodes: there is a near one-to-one correspondence between the Kohn–Sham eigenvalues of the isolated molecule (Fig. 3(a)) and the position of the resonances in the transmission spectrum. The corresponding transmission spectrum calculated using the PBE functional is shown in ESI, Fig. S2.†
The connection between current flow and the underlying electronic structure is established through the voltage- and energy-dependent transmission function, T(E, V):40
![]() | (1) |
| T(E, V) = tr[ΓLGR†MΓRGRM] | (2) |
![]() | (3) |
The most significant features of Fig. 4 from an electron transport perspective are the channels which lie close to the Fermi level at zero bias, namely the spin-α and spin-β components of the π* channel which, to a first approximation, are localised on the Ru2 unit and therefore couple more strongly to the right hand electrode (i.e. cSLn < cSRn). The magnitude of the transmission is therefore limited by the value of cSLn, the coefficient on the heterometal end of the molecule: physically, entry/escape of the electron from the Ni/Cu side of the molecule onto the left hand electrode is current-limiting. The spin-β component of π* in the transmission spectrum of Ru2Ni(dpa)4(NCS)2 is strikingly more intense than its spin-α counterpart, indicating a greater degree of left–right delocalisation in the former, a point confirmed by the circled regions in the isosurface plots shown in Fig. 4(a). The spatial difference between π*α and π*β is undeniably small, but it is responsible for a significant increase in transmission. In Ru2Cu(dpa)4(NCS)2, in contrast, it is the lower lying spin-α component of the π* channel that carries the greater intensity, although the difference is less marked in this case. The spin dependence of the delocalisation of the π* channels can be understood in qualitative terms using the spin polarised molecular orbital model shown in Scheme 1. The key feature here is that the orbital arrays for the spin-α (blue) and spin-β (red) manifolds need to be constructed separately, taking account of the energies of the component orbitals (i.e. those on M and those on Ru2) in zeroth order. On the left and centre of the figure are the valence orbitals of isolated Ni1+ (dxz/yz) and {Ru2}5+ (Ru–Ru π*) units, respectively. In both cases the spin-α levels (blue) lie below their spin-β counterparts (red) because all three metal atoms carry positive spin density in the quintet ground state. The splitting between the spin-α and spin-β components of the dxz/yz orbitals on Ni1+ and the π* on {Ru2}5+ (shown as black double headed arrows) is determined by the magnitude of the electron–electron repulsion, which is greater on Ni than on Ru (cf. the discussion of Fig. 3). When the two fragments are allowed to interact, the degree of delocalisation of the π*α and π*β channels will be determined by the zeroth order splittings between the same-spin components of Ni dxz/yz and Ru–Ru π* (ΔE1 and ΔE2) in Scheme 1. As a result of the greater spin polarisation at Ni vs. Ru2, this zeroth order splitting is lowest in the spin-β manifold (ΔE2 < ΔE1 in Scheme 1), and the π*β channel is therefore the more delocalised. In effect, the Au–SCN–Ni junction is more transparent to spin-β electrons than to spin-α. In Ru2Cu(dpa)4(NCS)2 the lower energy of the 3d orbitals on Cu reduces the degree of delocalisation, and hence the transmission, in both spin channels. Moreover, the absence of spin density on Cu (closed-shell d10 configuration) means that the splitting of the spin components is now greater in the {Ru2}5+ π* orbital than in Cu dxz/yz. It is therefore the spin-α components that have the smaller zeroth order separation (ΔE4 > ΔE3) and hence the greater delocalisation (although the difference between π*α and π*β is small).
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| Scheme 1 Origin of the spin-dependence of the delocalisation of the π* channels in Ru2Ni(dpa)4(NCS)2 and Ru2Cu(dpa)4(NCS)2. Red and blue lines denote the spin-β and spin-α manifolds, respectively. | ||
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| Fig. 5 Computed current–voltage characteristics for Ru2Ni(dpa)4(NCS)2 and Ru2Cu(dpa)4(NCS)2. Forward bias is defined where VR > VL (i.e. EfR < EfL and the flow of electrons is from Ni to Ru). | ||
Turning to the Ru2Ni(dpa)4(NCS)2 analogue, the forward current is again dominated by the π*β channel, and plateaus at ∼5 μA before increasing further at higher voltage. The 5-fold increase in plateau current compared to Ru2Cu(dpa)4(NCS)2 is a direct result of the spin polarisation of the dxz/yz levels on Ni which enhances the left–right delocalisation of the π*β channel and raises the intensity of the corresponding transmission peak. The behaviour under reverse bias is more complicated because there are now significant contributions to the current from both spin-α and spin-β manifolds. The spin-α current is again carried by the π* channel, which plateaus at ∼2 μA before tailing off to higher bias for exactly the same reasons as discussed above. In the absence of the spin-β component of the current, therefore, the π* manifold could support a rectification ratio of ∼3.0 at biases in excess of 1 V. In the present case, however, the rectification is compromised by the presence of a substantial spin-β component carried by the σnb channel, which also enters the bias window at −0.5 V (Fig. 6(b)).
Footnote |
| † Electronic supplementary information (ESI) available. See DOI: 10.1039/c4qi00038b |
| This journal is © the Partner Organisations 2014 |