How Chee
Ong
a,
João T. S.
Coimbra
b,
Germain
Kwek
a,
Maria J.
Ramos
b,
Bengang
Xing
a,
Pedro A.
Fernandes
*b and
Felipe
García
*a
aSchool of Physical and Mathematical Sciences, Division of Chemistry and Biological Chemistry, Nanyang Technological University, 21 Nanyang Link, 637371, Singapore. E-mail: fgarcia@ntu.edu.sg
bLAQV, REQUIMTE, Departamento de Química e Bioquímica, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre s/n, 4169-007, Portugal. E-mail: pafernan@fc.up.pt
First published on 25th August 2021
Triphenylphosphonium (TPP+) moieties are commonly conjugated to drug molecules to confer mitochondrial selectivity due to their positive charge and high lipophilicity. Although optimisation of lipophilicity can be achieved by modifying the length of the alkyl linkers between the TPP+ moiety and the drug molecule, it is not always possible. While methylation of the TPP+ moiety is a viable alternative to increase lipophilicity and mitochondrial accumulation, there are no studies comparing these two separate modular approaches. Thus, we have systematically designed, synthesised and tested a range of TPP+ molecules with varying alkyl chain lengths and degree of aryl methylation to compare the two modular methodologies for modulating lipophilicity. The ability of aryl/alkyl modified TPP+ to deliver cargo to the mitochondria was also evaluated by confocal imaging with a TPP+-conjugated fluorescein-based fluorophore. Furthermore, we have employed molecular dynamics simulations to understand the translocation of these molecules through biological membrane model systems. These results provide further insights into the thermodynamics of this process and the effect of alkyl and aryl modular modifications.
An effective strategy for enhancing mitochondrial uptake has been focused around tuning the molecule's lipophilicity, which has been demonstrated to be highly relevant for TPP+-conjugated systems.20–24 The typical strategy for enhancing lipophilicity for TPP+-conjugated compounds is by selecting a molecular fragment (module) with a higher lipophilicity as the linker – usually a longer alkyl chain6,23,24 – between the TPP+ moiety and the cargo, which increases the rate of membrane permeation and hence the mitochondrial accumulation.25 However, chain length modulation has its limitations. It may be more challenging to modify linkers with a specific function, such as cleavable linkers used for drug release purposes, where modification may lead to alteration of function.14,26,27
Aryl methylation thus presents itself as an attractive alternative when linker modification is not synthetically viable or when it affects linker functionalities. Furthermore, it enables a modular approach for the synthesis of conjugated cargo with variable lipophilicity by varying the starting phosphine. It has also been demonstrated that aryl methylation of TPP+ can improve mitochondrial uptake and lipophilicity, in a similar manner to chain length modification.21,22,28,29 While judicious alkylation of the phenyl rings in TPP+ moieties has been shown to be an effective method to enhance lipophilicity in both mono-TPP+ and bis-TPP+, no systematic comparison between these two modular approaches has been reported in the literature.21 A comparative study between the two methodologies was thus needed to evaluate the mitochondrial delivery efficacies of the two series of phosphonium salts.
Herein we report the first study comparing the effects of alkyl vs. aryl modification on mitochondrial uptake for triphenylphosphonium moieties (Fig. 1). For this purpose, we synthesised and evaluated nine alkyltriarylphosphonium salts, with permutations of three different aryl groups (phenyl, p-tolyl and 3,5-dimethylphenyl) as well as three alkyl groups of different lengths (ethyl, pentyl and octyl), and assessed the effects of the additional groups on lipophilicity and bioactivity. Conjugation to a fluorescein-based dye followed by confocal microscopy was employed to ascertain the mitochondrial targeting effects of these species to compare the two methodologies. To further understand the thermodynamics of these cations transport across biological membranes, we have also performed umbrella sampling molecular dynamics simulations using a 1-palmitoyl-2-oleoyl-glycero-3-phosphocholine (POPC) membrane model system.
The compounds were characterised by 1H, 31P{1H} and 13C{1H} NMR spectroscopy, high-resolution mass spectrometry (HRMS), and single crystal X-ray structures were obtained for compounds 1b–3b.
The characterisation data was fully consistent with the proposed structures, indicating the successful synthesis of the phosphonium salts.21,22 All single-crystal structures for series a and b were obtained, with two previously unreported structures (see ESI†).22,30 Unfortunately, compounds 1c–3c resisted all attempts at crystallisation, presumably due to the poor packing of the long and flexible alkyl chains, forming waxy solids instead.31
Compound | logP (±SD) | IC50 (±95% CI)/μM | Volume (±SD)/nm3 | SASA (±SD)/nm2 | ΔGvdWaq→oct/kJ mol−1 | logPmem |
---|---|---|---|---|---|---|
1a | −1.36 ± 0.09 | 16.15 ± 1.29 | 0.8912 ± 0.0264 | 5.381 ± 0.189 | −61.77 ± 0.57 | −0.73 ± 0.01 |
1b | −0.84 ± 0.01 | 1.64 ± 0.14 | 1.0481 ± 0.0313 | 6.255 ± 0.229 | −71.87 ± 0.68 | −0.47 ± 0.17 |
1c | 0.22 ± 0.02 | 0.34 ± 0.03 | 1.2053 ± 0.0359 | 7.137 ± 0.284 | −82.70 ± 0.71 | 0.45 ± 0.70 |
2a | −0.50 ± 0.05 | 3.83 ± 0.50 | 1.0502 ± 0.0323 | 6.296 ± 0.211 | −73.84 ± 0.54 | −0.54 ± 0.31 |
2b | 0.26 ± 0.02 | 0.45 ± 0.05 | 1.2087 ± 0.0365 | 7.184 ± 0.244 | −84.58 ± 0.53 | −0.38 ± 0.20 |
2c | 1.57 ± 0.02 | 0.30 ± 0.04 | 1.3646 ± 0.0420 | 8.056 ± 0.318 | −97.36 ± 0.83 | 1.69 ± 0.33 |
3a | 0.08 ± 0.02 | 0.80 ± 0.06 | 1.2063 ± 0.0350 | 7.130 ± 0.225 | −83.89 ± 0.69 | −0.28 ± 0.26 |
3b | 0.90 ± 0.01 | 0.36 ± 0.04 | 1.3633 ± 0.0387 | 7.983 ± 0.269 | −94.93 ± 0.81 | 1.10 ± 0.41 |
3c | 2.25 ± 0.05 | 0.32 ± 0.06 | 1.5112 ± 0.0485 | 8.756 ± 0.384 | −107.79 ± 0.87 | 2.30 ± 0.38 |
Fig. 2 Dose response curve of the methylated TPP+ salts (1a–3c) with TPMP. Error bars for logP are shown for standard deviation and inhibition as standard error. [TPP] is shown in μM. |
IC50 was observed to decrease with both increased alkyl chain length, as well as increasing aryl methylation. With an increase of the alkyl chain length from 1a–1c, the IC50 decreased from 16.15 to 1.64 to 0.34 μM. On the other hand, with an increase of the aryl methylation from 1a–3a, the IC50 dropped from 16.15 to 3.83 to 0.80 μM. The two modular approaches appear to be compatible, with compound 2b having a lower IC50 compared to 1b and 2a. However, the effects appear to diminish with the more lipophilic compounds. For example, 3c, with the longest alkyl chain and the most substituted aryl ring, had an IC50 of 0.32 ± 0.06 μM, which was similar to both 2c (0.30 ± 0.04 μM) and 3b (0.32 ± 0.02 μM). This indicates that the scope of the compounds studied approaches the upper limit for the lipophilicity-linked cytotoxicity observed in the literature, with negligible changes in IC50 over an order of magnitude of logP.24
Interestingly, while a sigmoidal model provided a good description for 1a and TPMP, a double-sigmoidal model was a more accurate model for the remaining compounds, which – to the best of our knowledge – has not been previously reported for TPP+ species. While there are multiple explanations in the literature for this phenomenon, ranging from cell population heterogeneity, differing mode of action at different concentrations, to cell-cycle phase specificity, detailed mechanistic studies are necessary to determine the cause of this phenomenon.37,38
The effects of compounds 1a–3c on the mitochondrial membrane potential (MMP) was also monitored. After treatment of HeLa cells with 2.5 μM of each of the nine compounds for 4 hours, the MMP was evaluated using the JC-1 assay (see ESI† for detailed procedures). The experimental results are shown in Fig. 3. The treatment with 1a–3c resulted in significant impact on the MMP with a large decrease in the MMP for the highly lipophilic salts (2c, 3b, 3c), similar to FCCP treatment, despite high cell viability (see ESI†). On the other hand, salts with low lipophilicity (1a, 1b, 2a) showed membrane hyperpolarisation, possibly due to the inhibition of ATPase or specific protein complexes.39,40 The results from the MMP assay correlated well with logP, with an evident sigmoidal relationship between MMP and logP (see ESI†). Interestingly, clustering of 1c, 2b and 3a (isomers) in the plot was observed as well. These observations indicate a possible competition between multiple interactions affecting the MMP (ATPase inhibition, proton leak, etc.), but additional studies will be required to determine the exact mechanism.
Fig. 3 R/G ratio after treatment with compounds 1a–3c and FCCP, before washing (blue) and after washing (red). Error bars refer to the standard deviations. |
Additional investigation on the reversibility of this effect was carried out by replacing the medium with fresh DMEM. After an additional 4 hours of incubation, the JC-1 assay revealed that the R/G ratio of most compounds, with the exception of the high lipophilicity derivatives, converged towards 1.2× the untreated control, showing a reduction in the magnitude of both the hyperpolarising and depolarising effects previously observed. This was attributed to a low residual amount of TPP+ still present after washing. Cell viability of all nine salts remained relatively similar compared to the previous data, indicating that further cell death was not significant.
In summary, the MMP was affected from incubation with all TPP+ salts, which were known to induce proton leaks and affect mitochondrial respiration.41,42 The effects appear to be correlated with the lipophilicity of the nine salts, with no significant difference between alkyl chain extension and aryl methylation. Removal of TPP+ from the cell medium results in a slow restoration of the MMP, with no further cell death observed.
The free energy profile can be qualitatively understood in 3 phases during translocation. As the TPP+ ion approaches the surface of the membrane, an increase in free energy (ΔGmax, region III) is observed. There is a subsequent decrease in free energy (ΔGmin, region II), and finally, we observe a free energy maximum in region I (ΔGB). The potential energy profiles of TPP+ ions with lipid bilayers have been previously written down as the sum of four terms, including Born, image and dipole energy contributions, and a neutral energy term.45,46 The free energy profile diagrams obtained are highly consistent with models previously reported in the literature.47,48
The free energy profile diagrams obtained further emphasise the importance of lipophilicity in TPP+ systems; since an increase in lipophilicity can be correlated with a respective decrease in free energy at all three critical points, ΔGmax, ΔGmin and ΔGB. Notably, the maximum values of the free energy profiles relative to water (defined at 0.0 kcal mol−1) of isomeric compounds are comparable, with 1b/2a at 9.80–9.85 kcal mol−1, 1c/2b/3a at 7.28–8.61 kcal mol−1, and 2c/3b at 3.99–4.63 kcal mol−1 (see ESI,† Table S3). We also observed that among the four compounds with the lowest IC50 (between 0.30 and 0.36 μM), 1c, 2c, 3c and 3b, showed the smallest free energy barrier for penetrating the high-density region of the bilayer (ΔGmax), and except for 1c, these compounds had low ΔGB values (see Fig. 4 and ESI,† Table S3).
To allow the full translocation free energy profile to be considered, the membrane partition coefficient (logPmem) was computed from the free energy profile diagrams by calculating the standard binding free energy of the cations to the membrane (Table 1, see ESI† for more details). We observed that the four compounds with the lowest IC50 (between 0.30 and 0.36 μM) – 2c, 3c, 1c and 3b, were the only ones to show a positive logPmem (between 0.45 and 2.30). The logPmem obtained were also found to be well-correlated with experimental logP, and consistent with previously reported translocation rate constant trends in black lipid membranes,49 (r2 = 0.89, Fig. S8, ESI†), with a mean unsigned difference of 0.29 ± 0.23. However, these differences were to be expected as the experimental results were obtained in water and 1-octanol.
The logPmem for the different isomers were then compared in terms of aryl substitution vs. alkyl chain length modules. For the 1b/2a isomers, very similar membrane partition (−0.47 ± 0.17 and −0.54 ± 0.31, respectively) were obtained. As for the other isomers, i.e., 1c/2b/3a and 2c/3b, the simulations showed that 1c and 2c had a higher membrane partition when compared with their respective isomers (ranging from 0.6 to 0.8). This suggests that a longer alkyl chain length module could have an increased tendency to associate with lipid membranes despite having similar lipophilicities.
To examine the possible different tendencies to form ion-pairs for 1a–3c, which may affect translocation profiles, an ionic concentration of ca. 0.15 M of NaCl was used throughout our studies. By following the number of contacts between the cations and the Cl− ions present in the system, we did not detect the formation of ion pairs as the cations translocated the hydrated bilayer system (see Fig. 4). Still, in a separate simulation, we have constrained the interatomic distance between one Cl− ion and the 1a cation, to investigate the effect of the formation of an ion pair in the translocation free energy profile of 1a (see ESI,† Fig. S9). We observed that ion pairing should not be favourable for the translocation of this cation, which is in agreement with existing literature for TPMP using DFT-based continuum model calculations by Hartley, Murphy et al., which have shown that the energetic penalty for TPMP to be transferred from water to the non-aqueous hexane phase as an ion-pair was larger than for the TPMP cation alone.50 Although the same partition was obtained with or without constraining interatomic distances, the free energy barrier of 1a without constraints were lower by ca. 2 kcal mol−1.
The synthesis of TPP+-conjugated fluorescein was achieved in three steps: esterification of fluorescein, synthesis of ω-bromoalkyltriarylphosphonium bromide and Williamson ether synthesis for the conjugation of TPP+ to the dye (Scheme 2). 4a–4e were characterised by 1H, 13C{1H} and 31P{1H} NMR and HRMS. The experimental excitation/emission fluorescence spectra obtained for the five conjugated dyes were virtually identical in both intensities and wavelengths (see ESI,† Fig. S6). logP values for the TPP+–fluorescein conjugates were also quantified experimentally and presented in Table 2. The relative increase in logP values were highly consistent with the differences in the unconjugated TPP+ salts.
Compound | logP (±SD) | Fluo/MT (±SD) | Pearson's coefficient | M1 | M2 |
---|---|---|---|---|---|
4a | 0.42 ± 0.04 | 0.065 ± 0.053 | 0.568 ± 0.108 | 0.954 ± 0.023 | 0.874 ± 0.013 |
4b | 1.25 ± 0.05 | 0.521 ± 0.042 | 0.884 ± 0.006 | 0.956 ± 0.013 | 0.967 ± 0.007 |
4c | 2.72 ± 0.07 | 1.009 ± 0.091 | 0.896 ± 0.006 | 0.973 ± 0.004 | 0.974 ± 0.003 |
4d | 1.43 ± 0.01 | 0.361 ± 0.058 | 0.856 ± 0.021 | 0.956 ± 0.012 | 0.965 ± 0.004 |
4e | 2.37 ± 0.01 | 0.757 ± 0.058 | 0.877 ± 0.018 | 0.954 ± 0.007 | 0.967 ± 0.006 |
To measure the mitochondrial uptake and subcellular localisation of these conjugated dyes, HeLa cells were treated with compounds 4a–4e (100 nM) together with MitoTracker DeepRed FM (25 nM) in DMEM for 30 minutes, washed with 3 × 200 μL of PBS, and the medium was replaced with DMEM. The samples were then examined under a confocal microscope. The relative mitochondrial uptake among the cells was quantified using the ratio of fluorescence intensities between the 4a–4e and the MitoTracker (Fluo/Mt). Additional image analyses (n = 5) were performed to show colocalisation with MitoTracker Deep Red, and the data is presented in Fig. 5 and Table 2.
The images obtained revealed a colocalisation of the TPP+ conjugated dyes and MitoTracker Deep Red, indicating a high selectivity of compounds 4a–4e for the mitochondria. The Pearson's correlation coefficient for compounds 4b–4e were very high, ranging from 0.856 to 0.896. Although compound 4a has a relatively low r-value of 0.568, the Van Steensel's curve supports that like the other four dyes, 4a localises in the mitochondria, with the maximum in the cross-correlation function at dx = 0 for all compounds (see ESI†). The high Mander's coefficient, M1 and M2, which ranges from 0.954 to 0.974 for compounds 4b–4e indicates the bulk of the fluorescence signal overlaps between the MitoTracker and fluorescein channels, further supporting a high degree of mitochondrial selectivity.
Evidently, the fluorescent intensity from the fluorescein dyes were correlated with lipophilicity. As the chain length was extended from 5 to 11 carbons in compounds 4a/4b/4c, the Fluo/MT ratio increased 16 times from 0.065 to 1.009. Similarly, an increase in aryl groups methylation results in an increase in mitochondrial accumulation as the Fluo/MT ratio for compounds 4a/4d/4e increased 12 times from 0.065 to 0.757. Both methods were found to increase mitochondrial uptake drastically, indicating the viability of both methodologies for mitochondrial delivery, consistent with other work in the literature. Fluo/Mt was found to correlate well with logP values of the TPP+–fluorescein conjugate (r2 = 0.94). The slightly increased performance of 4c as compared to 4e was hence attributed to the higher lipophilicity (2.72 ± 0.07 for 4c and 2.37 ± 0.01 for 4e).
Our work underscores the modular nature and complementary nature of both approaches. We hope our work will catalyse the synthesis of a wide range of fine-tuned mitochondrial delivery vectors based on a broader range of phosphonium salts and other non-conventional delivery vectors.
Footnote |
† Electronic supplementary information (ESI) available. CCDC 2078443 and 2078444. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/d1cb00099c |
This journal is © The Royal Society of Chemistry 2021 |