Dongwen
Luo†
ab,
Jiefeng
Huang†
b,
Yanhong
Jian†
b,
Ayushi
Singh
d,
Abhinav
Kumar
*d,
Jianqiang
Liu
*bde,
Ying
Pan
*ab and
Qin
Ouyang
*c
aThe First Dongguan Affiliated Hospital, Guangdong Medical University, Dongguan, 523808, China. E-mail: panying@gdmu.edu.cn
bGuangdong Provincial Key Laboratory of Research and Development of Natural Drugs, and School of Pharmacy, Guangdong Medical University, Guangdong Medical University Key Laboratory of Research and Development of New Medical Materials, Dongguan, 523808, China. E-mail: jianqiangliu2010@126.com
cDepartment of General Surgery, Dalang Hospital, Dongguan, Guangdong, China. E-mail: ouyangqin8@sina.com
dDepartment of Chemistry, Faculty of Science, University of Lucknow, Lucknow-226007, India. E-mail: abhinavmarshal@gmail.com
eAffiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China
First published on 30th June 2023
The detection of active substances in the body is very important for good human health as it gives important insights into the smooth functioning of the body. Most of the conventional materials that can be used as suitable probes require complicated fabrication methodologies, have poor stability and are susceptible to environmental effects. In contrast, metal–organic frameworks (MOFs) offer unique advantages as probes for testing analytes due to their tunable porosity, good specific surface area and ease of modification. Unlike previously reported perspectives/reviews, this perspective focuses on the latest applications of MOFs as detection materials for hydrogen peroxide, various metal ions, hydrogen sulfide, organic small molecules, glutathione, and organic macromolecules such as nucleic acids, and focuses on providing a more detailed mechanism of action. Also, the basic principles of action utilized by this class of materials are discussed.
Over the past few decades, investigators have developed a range of materials for the detection of these active substances that are broadly categorized as natural enzyme-based detection materials, enzyme-like bioactive detection materials and non-enzyme detection materials. Natural enzyme-based detection materials have some inherent disadvantages, including their inherent instability, vulnerability to external influences, susceptibility to deactivation, and stringent experimental requirements.1 Enzyme-like detection materials include conducting polymers, metals and their compounds, mesoporous carbon and graphene composites, among others.2 These materials are highly sensitive and are currently used in the detection of various analytes; while non-enzymatic detection materials include noble metals,3 transition metals,4 metal oxides,5 or sulfides,6 and carbon-based materials.7 Due to their simplicity, low price, and comparatively high stability, these materials are frequently extensively used. Furthermore, the ability of these materials to combine with certain organic nanoparticles is another crucial quality. Nanomaterials' distinctive physicochemical characteristics, such as their high biocompatibility and outstanding electrical conductivity, enable them to significantly improve the performance of traditional detection materials.
A new class of porous materials known as metal–organic frameworks (MOFs) is made up of coordination bonds that bind metal centers or clusters to organic building blocks.8,9 MOFs offer benefits such as adjustable porosity, high specific surface area, and customizable architectures when compared to typical porous materials such as porous carbon, porous catalysts and porous polymers.10–14 All these properties could (at least theoretically) address the need to develop novel sensing materials with high sensitivity, excellent selectivity, fast response times, enhanced stability and reusability.15 Hence, MOF materials have promising future in the fields of bioimaging, adsorption,16,17 catalysis,18 magnetism,19 sensing,20,21 and drug delivery.22 Recently, the biological uses of MOFs have drawn a lot of attention in recent years, particularly in the area of electrochemical biosensing.15,23,24 MOFs possess open metal sites at their backbone that provide mimetic catalytic properties and amplify electrochemical signals that effectively improve the sensitivity of detection.25 Recently, researchers have employed MOFs as biosensors for the detection of different components in cells such as deoxyribonucleic acid (DNA), ribonucleic acid (RNA), glutathione (GSH),26 metal ions,27–29 and cancer biomarkers (hydrogen sulfide (H2S), hydrogen peroxide (H2O2), and ascorbic acid).30–32 Also, as compared to conventional detection techniques, MOF-based biosensors have better sensing efficiency, enabling detection at fg mL−1 or even lower concentrations.33,34
The basic principle of MOF-based materials for sensing of analytes is shown in Fig. 1. The mechanism of action mainly involves the following steps: first, the material catalyzes the reduction of the analytes to produce an electrochemical signal; second, the structure of the material is altered upon interaction with the analyte, thus producing a fluorescent effect; third, certain materials have a fluorescent effect of their own and undergo a fluorescence enhancement on interaction with the analytes. Since different analytes have to be detected, the materials used for the detection these analytes are also different. The timeline for the development of MOFs for the detection of glutathione, hydrogen peroxide, hydrogen sulfide and ionophores is presented in Fig. 2.
In view of the importance of MOFs as apt sensing systems to selectively and efficiently detect a plethora of biological analytes, this perspective focuses on the recent investigations on the use of MOFs as biosensors for the detection of hydrogen peroxide (H2O2), metal ions, hydrogen sulfide and organic molecules in biological cells. The main MOF-based materials as sensors for the analytes mentioned in this paper are classified and presented in Table 1.
MOF | Substances tested | Synthetic method | Detection limits | Detection range | Ref. |
---|---|---|---|---|---|
Fe-Hemin-MOFs | H2O2 | Ultrasound synthesis method | 0.57 μM | 1–61 μM, 61–1311 μM | 2 |
Au-NPs/Cu-HHTP-NSs | H2O2 | Solvothermal method | 0.0056 μM | 50 nM–16.4 mM | 46 |
pFeMOF/OMC | H2O2 | Hydrothermal method | 0.45 μM | 0.5–70.5 μM, 70.5–1830.5 μM | 47 |
AuNFs/Fe3O4@ZIF-8-MoS2 | H2O2 | Electrochemical deposition method | 0.9 μM | 5 μM–120 mM | 48 |
ZIF-67-Au@Pt | H2O2 | Ultrasound synthesis method | 0.086 μM | 0.8 μM–3 mM | 49 |
SGO@HKUST-1 | H2O2 | Solvothermal method | 0.49 μM | 1 μM–5.6 mM | 50 |
PtCu@MOF/C | H2O2 | Self-sacrificing templates | 0.22 μM | 1 μM–3 mM | 51 |
Cu-Hemin MOFs/3D-RGO | H2O2 | Co-precipitation method | 0.14 μM | 10–24400 μM | 52 |
MIL-47(V)-OH | H2O2 | Electrochemical methods | 4.38 μM | 4.38–43.98 μM, 50.33 μM–2.24 mM | 53 |
Zr-UiO-66-B(OH)2 | H2O2 | Solvothermal method | 0.015 μM | — | 60 |
UCNP@ZIF-NiSx | H2O2 | In situ growth method | 0.032 μM | 0.05–20 μM | 61 |
TbTATB | Zn2+ | Solvothermal method | 0.0105 μM | — | 64 |
AuNCs/Zn-MOF | Zn2+ | Hydrothermal method | 0.006 μM | 12.3 nM–24.6 mM | 65 |
DNAzyme-MOFs | Zn2+ | DNA solid phase synthesis, solvothermal method | 0.0035 μM | — | 66 |
ZIF-8@Cmim | Fe2+ | Solvothermal method | 7.64 μM | — | 71 |
Fe-MIL-88NH2@RhB | Cu2+ | Solvothermal method | 4.23 μM | — | 73 |
UiO-66@N3 | H2S | Solvothermal method | 118 μM | — | 80 |
CD-MONT-2 | H2S | Solvothermal method | 0.058 μM | — | 81 |
Al-MIL-53-N3 | H2S | Solvothermal method | 0.090 μM | — | 82 |
CuxOS-@ZIF-8 | H2S | In situ growth method | 0.0022 μM | — | 83 |
Mi-UiO-67 | GSH | Solvothermal method | 0.010 μM | — | 95 |
MnO2 NS@Ru(bpy)32+-UiO-66 | GSH | In situ growth method | 0.28 μM | — | 96 |
TPNP-1 | GSH | Solvothermal method | 0.087 μM | 0–80 μM | 97 |
PANMOF | miRNA | In situ growth method | ∼0.001 μM | 0–1000 nM | 102 |
CoNi-MOF | miRNA | Solvothermal method | 0.0014 μM | 1–10 nM | 104 |
TP-CHA-UiO-66 | miRNA | Solvothermal method | 160 μM | 1–60 nM | 105 |
A new heme metal–organic framework (Fe-hemin-MOFs) with distinct peroxidase-like bioactivity was reported by Zhao et al. This material exhibited excellent hydrogen peroxide catalytic activity and can be further loaded with chitosan-reduced graphene oxide (CS-rGO), which resulted in an enhanced electrochemical signal. The mechanism of action is as follows: H2O2 is first reduced to H2O via the material catalytic center hemin (Fe2+), which is oxidized to hemin (Fe3+). Hemin (Fe3+) is then reduced at the electrode and generates an electrical signal. In this process, CS-rGO accelerates the transfer of electrons and further promotes the catalytic process of H2O2. The ligand structure of the haemoglobin-MOFs can shield the haemoglobin active centre and increases stability, and haemoglobin can imitate artificial enzymes with strong electrocatalytic activity. The synergistic effect of CS-rGO and Fe-hemin-MOFs could have an enhanced electrochemical signal and provided an excellent H2O2 reduction capability in the sensor. This material had a lower detection limit than most electrochemical sensors based on peroxidase-like MOFs. This is encouraging for the detection of H2O2 at low concentrations. It also allowed real-time monitoring of H2O2 release from living cells, thereby providing a promising strategy for biomolecular monitoring.2
In 2022, Huang and co-workers developed a high-performance electrochemical biosensor based on a highly active dual-nanosome amplification system, comprised of ultrathin two-dimensional (2D) conductive metal–organic framework (C-MOF) nanosheets (NSs) that was modified with high-density ultra-fine gold nanoparticles (Au-NPs), Au-NPs/Cu-HHTP-NSs, and explored its application in the C-MOF-NSs (i.e. Cu-HHTP (HHTP = 2,3,6,7,10,11-hexahydroxybenzophenanthrene)-NSs). These materials provided a large surface area and abundant active open metal sites that greatly enhanced the catalytic activity towards H2O2. The large number of exposed oxygen atoms was used as anchor sites to deposit high density ultrafine Au-NPs without agglomeration (Fig. 3). The material was synthesized using a solvothermal method. The anionic surfactant sodium dodecyl sulphate (SDS) acted as a barrier, reducing interlayer build-up and weakening interlayer interactions, which in-turn resulted in the formation of ultra-thin large size nanosheets during sonication, thereby providing a high specific surface area with abundant anchoring sites. The nanoenzyme Au-NP materials were grown in situ on the reduced precursor tetrachloroauric acid (HAuCl4) without adding reducing or capping agents. Notably, due to the synergistic effect of the highly active Cu-HHTP-NSs and Au-NPs and their unique structural and electrical properties, the prepared nano-hybrid modified electrodes exhibited good sensing performance for H2O2 with extremely low detection limits and high sensitivity.46
Fig. 3 Synthesis of Cu-HHTP-NSs and real-time tracking of mitochondrial release of H2O2.46 Reproduced with permission. Copyright 2022, Elsevier. |
Also, some enzyme-like materials in combination with MOFs can engender detection materials that display good sensing and detection activity with high accuracy. pFeMOF/OMC, a new porphyrin-iron metal–organic framework (pFeMOF) modified with ordered mesoporous carbon (OMC), was synthesized by Liu et al. in 2017. The mechanism of action of this sensor operated through the reduction of H2O2, generating an electrical signal for detection purposes. Fe3+ can strongly coordinate with the carboxylate of the porphyrin moiety to produce an amplified electrochemical signal due to the peroxidase-mimicking properties of pFeMOF. The carbon skeleton of OMC exhibited a limiting effect on the growth of pFeMOF crystals, reducing the aggregation of pFeMOF and thus producing more active sites for H2O2 reduction. Also, an increase in the number of mesopores accelerated the diffusion rate. Additionally, the introduction of OMC improved the conductivity and stability. More importantly, the biosensor possesses the potential to detect the release of H2O2 from living cells and can accurately detect H2O2 even at low concentrations.47 Lu et al. also developed an electrochemical biosensor Fe3O4@ZIF-8 hybrid nanosensor. This nanosensor was prepared by electrodepositing gold nano-flowers (AuNFs/Fe3O4@ZIF-8-MoS2) on a magnetic metal–organic framework (MMOF) supported over molybdenum disulphide (MoS2) nanosheets in which the magnetic Fe3O4 nanoparticles have high simulated peroxidase activity, while the MOF backbone ZIF-8 possesses a large pore size and high specific surface area. The mechanism of action of the sensor is as follows: the H2O2 released by the cell is specifically captured by it, and the H2O2 is reduced by redox reaction and generates an electron transfer effect, thereby producing a characteristic electrical signal. However, it was found that the MMOF Fe3O4@ZIF-8 nanomaterials readily dissolved into the electrolyte solution and subsequently generated irreducible electrochemical reactions. Long-term stability, electrical conductivity, and catalytic characteristics of the materials may all be significantly enhanced by MoS2 nanosheets and one-step electrodeposited gold nanostructures. MoS2 nanosheets and electrodeposited gold thin films have a considerable impact on the surface state retention of Fe3O4@ZIF-8 nanomaterials, as well as their electrocatalytic activity. With a low detection limit of 0.9 μM and an ultra-wide linear range of 5 μM–120 mM, the material demonstrated substantial electrocatalytic reduction activity towards hydrogen peroxide. The sensor has been successfully utilized to track the release of extracellular H2O2 from H9C2 cardiomyocytes.
As shown in Fig. 4, H9C2 cardiomyocytes were used as a model for H2O2 release from live cells by adding ascorbic acid (AA) as the stimulant and the ability of the sensor to detect H2O2 was assessed by detecting superoxide production by dehydrogenation staining (DHE). As shown in Fig. 4A and B, AA-treated H9C2 cells exhibited much higher levels of reactive oxygen species than untreated H9C2 cells. As presented in Fig. 4C, the addition of 400 μM of AA to a PBS solution containing H9C2 cardiomyocytes (2 × 106 cells) resulted in a change in the electrochemical signal of approximately 0.12 μM. There was no significant difference in the current signal with merely AA or cells, demonstrating that H2O2 was released by H9C2 cells. Fig. 4D shows the electrochemical experiments after seeding on cells in culture dishes for phase comparison. Most of the cells were alive and typically attached to the culture dish. However, the sensor posed new challenges in terms of sensitivity and selectivity when it comes to detecting extracellular H2O2 in the culture dish. Hence, combining microfluidic chips and electrochemical sensors may give new possibilities for cell attachment and growth in the future, allowing for sensitive and selective observation of cell activity.48
Fig. 4 DHE fluorescence staining of H9C2 cells. (A) Without AA and (B) with 400 μM AA for 5 min. (C) Current effects of AuNFs/Fe3O4@ZIF-8-MoS2/GCE on H9C2 cells spiked with 400 μM AA (with and without H9C2 cells) and H9C2 cells without AA (cell number 2 × 106 cells). (D) Microscopic image of H9C2 cells cultured on a cell culture dish after electrochemical detection (scale bar is 200 μm).48 Reproduced with permission. Copyright 2020, Elsevier. |
Wang et al. reported a novel nanosensor for enzymes, ZIF-67-Au@Pt. The nanoparticle ZIF-67 possessed a hollow structure with Au@Pt nano-flowers loaded on its surface. Using the porous nature and large surface area of the MOF material, more particles can be adsorbed for catalysis. The Au@Pt nanoflower structure has a core–shell bimetallic structure. On the surface of the bimetallic catalyst, the Au particles are positively charged, while the addition of a negatively charged second active metal (e.g. Pt) increases the negatively charged area of the entire catalyst surface, which facilitated the H2O2 catalytic reaction. The sensor had a good linear range of 0.8 μM–3 mM with a correlation coefficient of 0.9936 and a detection limit of 86 nM. The main advantage of this material was that it not only had good electrical conductivity to amplify the current signal, but the core–shell nanoflower formed by Au@Pt can effectively catalyze the oxidation of H2O2. This sensor offers a promising application in biomedical monitoring.49
In non-enzymatic materials, precise detection of H2O2 can be achieved even in the absence of enzyme recognition and catalysis due to the material's inherent activity towards H2O2. Wang et al. used graphene oxide (GO), benzene 1,3,5-tricarboxylic acid (BTC) and copper nitrate (Cu(NO3)2) to synthesize a novel metal–organic backbone (MOF) containing an electroactive nanocomposite with graphene fragments and HKUST-1 to create SGO@HKUST-1. They showed that GO acted as an effective structural guide to induce the transformation of HKUST-1 from an octahedral structure to a hierarchical flower-like structure. The special feature of this process is that the graphene oxide is broken down into small fragments involved in the formation of HKUST-1, which are then converted to their reduced form during the reaction, thereby significantly increasing the surface area, electronic conductivity and redox capacity of the material. In addition, the synergistic interaction of graphene and HKUST-1 provided enhanced electrocatalytic activity, fast responsiveness and high selectivity for H2O2 reduction. Compared to other sensors, this sensor showed excellent performance in terms of linear range and detection limits for measuring H2O2. The reasons for this may be as follows: first, the presence of abundant and appropriately sized pores of MOFs in the material facilitates the transport of H2O2 molecules through the interface; second, the SGO attached to the MOFs has excellent electronic conductivity and high catalytic capacity for the electro-reduction of H2O2. This material exhibited satisfactory results as a sensing material for the electrochemical detection of H2O2 in complex biological samples (e.g. human serum).50 Chen et al. synthesized a unique non-enzymatic electrochemical sensor, PtCu@MOF/C, in which Pt-Cu alloy nanoparticles acted like a H2O2 active center that were pre-loaded on a conductive support and wrapped by a copper-based MOF shell using a self-sacrificing template route that formed a semi-enveloped structure. This semi-enclosed structure offered a lower limit of material detection than the fully enclosed structure of the composite. The synergistic effect operating at the interface between the MOF shell and PtCu conductive support provided better selectivity for the detection of H2O2 compared to the unmodified sensor. The novel MOF armored structure of the as-prepared PtCu@MOF/C sensor, especially PtCu@HKUST-1/C with smaller MOF pores, exhibited excellent interference immunity, high stability and high reproducibility in the detection of H2O2 (even when released from living cells).51 Zhou et al. in the year 2021 reported a copper-hemin metal–organic framework nano-flower/3D-reduced graphene oxide (Cu-hemin MOFs/3D-RGO) based on copper-hemin MOFs. This nanocomposite material was synthesized by co-precipitation using hemin as a ligand and then modified with 3D-RGO. This nanocomposite exhibited a three-dimensional hollow spherical flower-like structure with large specific surface area and mesoporous properties. This opened up the new possibility of loading more biomolecules and greatly improved the stability by protecting hemoglobin. In addition, the introduction of 3D-RGO effectively enhanced the electrical conductivity of Cu-hemin MOFs, thereby exhibiting good electrochemical properties towards H2O2 and enabled in situ real-time detection of H2O2 release from living cells.52 Yang et al. designed a sensitive sensor, MIL-47(V)-OH, in the presence of negatively charged superoxide ions, that selectively and sensitively detected H2O2. Interestingly, by adjusting the ligand in particular by replacing 2-amino terephthalic acid with the 2,5-dihydroxy terephthalic acid of MIL-47(V), the reaction was accelerated at least by a factor of 10 times. In addition, the low detection limit and wide linear range of the MIL-47(V)-OH biosensor enabled it to be used for in situ monitoring of H2O2 release from tumour cells. Also, the conversion of H2O2 into superoxide negative ions without applying voltage demonstrated the inhibitory effect of MIL-47 on tumour cells, enabling highly selective and rapid in situ detection of H2O2 release from living cells.53
Of the abovementioned materials, different MOFs showed high sensitivity and accurate detection of hydrogen peroxide in vivo due to their unique structural characteristics as electrochemical sensors. The enzyme-like MOFs offered good electrocatalytic effects on hydrogen peroxide artificial enzymes, and the addition of MOFs allowed them to overcome the inherent drawbacks of enzymes, which uplifted their performance. The enzyme-like MOFs can mimic hydrogen peroxide properties and generate amplified electrochemical signals; while for the non-enzymatic MOFs, the synergistic interaction between the components is also active against hydrogen peroxide and they possess high electrical conductivity. In conclusion, these MOF-based materials are important for the detection of hydrogen peroxide in vivo. Fig. 5 illustrates the syntheses and application of several representative materials.
Fig. 5 (A) Schematic diagram of the synthesis of ferrohemoglobin MOFs/CS rGO for real-time monitoring of H2O2 released from living cells.2 Reproduced with permission. Copyright 2020, Analytica Chimica Acta. (B) Schematic diagram of an AuNFs/Fe3O4@ZIF-8-MoS2 nanocomposite modified glassy carbon electrode (GCE) for electrochemical determination of H2O2 released from living cells under drug stimulation.48 Reproduced with permission. Copyright 2020, Sensors and Actuators B: Chemical. (C) Demonstration of MIL-47(V)-OH (left) detection of H2O2 released from tumour cells and rapid detection of H2O2 by modulating the ligand of MIL-47 (right).53 Reproduced with permission. Copyright 2022, Elsevier. |
Currently, some luminescent MOFs show great potential for the detection of H2O2 that includes, the ZIF series,54 the Ln-based MOFs,8,55 the PCN series,56,57 and the UiO series.58,59 However, due to the lack of in-depth knowledge and design of the materials, the advantageous features of MOFs are not fully explored, which directly led to a more common detection capability. Mostakim and co-workers synthesized a new boronic acid-functionalized Zr-MOF, Zr-UiO-66-B(OH)2 in 2018 by reacting ZrOCl2·8H2O and 2-borobenzene-1,4-dicarboxylic acid (BDC-B(OH)2) in the presence of formic acid in N,N-dimethylacetamide (DMA) by solvothermal reaction. It is worth noting that in the presence of H2O2, the boronic acid functionalized ligand (BDC-B(OH)2) of this material underwent selective reaction with it and the additional –B(OH)2 group was converted to the –OH group. This formed Zr-UiO-66-OH, which exhibited strong fluorescence and does not undergo conversion to other ROS. This reflected the specificity of the fluorescence effect of the material on H2O2 and its selective detection of H2O2 even in the presence of other interfering ROS. This probe was highly sensitive with a detection limit of 0.015 μM, which was lower than the detection limit of other MOF-based H2O2 fluorescent sensors and hence can be effectively used to detect H2O2 in living cells.60
Additionally, the background auto-fluorescence effect of complex biological matrices can hinder the detection of H2O2 in living organisms. In 2019, Hao et al. synthesized a hybrid component, the assembly of which consists of an upconverted nanoparticle (UCNP) core and chiral NiSx NPs (written UCNP@ZIF-NiSx) wrapped in a zeolite imidazole frame-8 (ZIF-8) shell. Fig. 6 shows a TEM image of the process and the structure of the component used to detect H2O2in vivo. The experiments showed that the UCNP@ZIF-NiSx nanocomponent exhibited strong circular dichroism (CD) signals at 440 and 530 nm. However, in the presence of H2O2, the CD signal intensity of this component decreased and the color disappeared, which was probably due to the degradation of NiSx NPs by H2O2. When the concentration of H2O2 was between 0.05 and 20 μM, the electronic absorption spectra of this probe overlap with the green emission of UCNPs appearing at 540 nm, and the reaction of H2O2 with the probe led to the reduction of the absorption of the probe at 660 nm, the disappearance of the CD signal and the recovery of the luminescence signal. Even in the presence of other interfering components, there was no significant change in the CD or luminescence signal. This indicated that the probe offered good selectivity and high sensitivity. This strategy showcased the potential of chiral nanocomponents for ROS detection and provided a new idea for the development of chiral nanomaterials for biomedical and biological analysis.61
Fig. 6 (A) Schematic diagram of the UCNP@MOF-NiSx nanocomponent used to detect intracellular H2O2. (B) (a) a TEM image of the UCNP@ZIF nanostructure; (b) a TEM image of the UCNP@MOF-NiSx nanocomponent and the inset shows a high-resolution TEM image of NiSx in the nanocomponent.61 Reproduced with permission. Copyright 2019, Journal of the American Chemical Society. |
In summary, the fluorescence and in vivo luminescence properties using these materials have been shown to be highly sensitive and selective for the detection of H2O2 in living cells. However, there are some urgent issues that need to be addressed. First, there are sporadic reports on the fluorescent MOF-based materials that find utility as sensors for H2O2. Second, the fluorescence intensity of these materials is still not strong enough and needs to be further improved.
Shi et al., developed a nano-probe for two-photon imaging of DNAzyme-MOFs based on phosphate ion activation. As shown in Fig. 7, the strong coordination between the phosphate O and the Zr center in the MOF induced Zn2+-specific RNA cleavage DNAzyme onto the MOF. This synergistic effect inhibited the extracellular activity of DNAzyme; however, upon cell entry, DNAzyme was released from the MOF by competitive binding of phosphate ions present at high intracellular concentrations. Upon release, the two-photon (TP) fluorophore-labelled DNAzyme substrate strand was cleaved in the presence of Zn2+, releasing a shorter strand of DNA labelled with a TP fluorophore, thereby resulting in a strong fluorescent signal. The addition of TPF fluorophores to the nanoprobe facilitated near infrared excitation, which allowed highly sensitive and specific imaging of Zn2+ in live cells and tissues at greater depths than previously possible. The TP imaging capabilities facilitated the monitoring of apoptosis-related Zn2+ elevations in live cells and deep tissues. This phosphate ion activation strategy offers great potential for a variety of medical applications.66
Fig. 7 The construction of the TP-DNAzyme-MOFs nanoprobe and its application in the detection of intracellular Zn2+ content.66 Reproduced with permission. Copyright 2020, ACS. |
Fig. 8 The mechanism of action of ZIF-8@Cmim.71 Reproduced with permission. Copyright 2021, Elsevier. |
Fig. 9 (A) Luminescence spectra of Fe-MIL-88NH2@RhB at different Cu2+ concentrations in aqueous solution. (B) Standard curve of Cu2+ concentration. (C) Fluorescence intensity response of Fe-MIL-88NH2@RhB to other metal ions. (D) Interference test of Fe-MIL-88NH2@RhB against other metal ions.73 Reproduced with permission. Copyright 2021, Elsevier. |
The majority of the probes discussed in the preceding sections had deep tissue penetration, good selectivity, and outstanding biosafety. All of these features make these probes extremely useful for bioassays and biological studies. But there are, however, some issues with these probes. The majority of the techniques employed for these probes are fluorescence-based, with only a few exceptions using alternative approaches. It is envisaged that additional detection technologies will arise in the future, providing even better options for the detection of these ions.
In order to evaluate the response time of UiO-66@N3 towards H2S, the periodic fluorescence spectra were obtained (Fig. 10A). The results showed enhancement in fluorescence intensity by 16 times with t1/2 = 13.6 s, and the reaction was completed within tR = 180 s. This rapid response illustrated the potential of UiO-66@N3 for real-time intracellular H2S imaging. To demonstrate the sensing capabilities of UiO-66@N3 in biological systems, they performed cytotoxicity and live cell imaging studies using HeLa cell lines. The cytotoxicity of UiO-66@N3 was determined by 3-(4,5)-dimethylthiahiazo(-z-y1)-2,5-di-phenytetrazoliumromide (MTT) assay and the toxicity level of UiO-66@N3 to HeLa cells was determined by different concentrations of UiO-66@N3. They first incubated HeLa cells with UiO-66@N3 for 6 hours after which HeLa cells still exhibited low toxicity (Fig. 10B). In cell imaging studies, very low intensity fluorescence was observed when HeLa cells were incubated with UiO-66@N3 for 6 hours (Fig. 10C–E). However, strong fluorescence was observed in HeLa cells after incubation with Na2S for 30 min under the same conditions (Fig. 10F–H). These results indicated that UiO-66@N3 has a high selectivity and fast fluorescence initiation reaction against H2S and thus, can be used to monitor H2S in cells. The main mechanism behind the fluorescence turn-on response of UiO-66@N3 towards H2S was attributed to the reduction of a “dark” azido group to an emitting amino group. This was the first example of MOF showing a rapid and highly selective fluorescence initiation response to H2S under physiological conditions.
Fig. 10 (A) Fluorescence response of 1-N3 towards the addition of Na2S after 0, 60, 180, 300, 420 and 540 seconds. Inset: Time dependence of emission intensity at 436 nm. (B) HeLa cells were treated with 1-N3 before adding MTT for 6 h. Results are expressed as % of the control (100%). (C–E) Fluorescence imaging of HeLa cells incubated with 1-N3. (F–H) Fluorescence imaging of HeLa cells incubated with Na2S.80 Reproduced with permission. Copyright 2014, Springer Nature. |
Xin et al. developed a cyclodextrin (CD)-based metal–organic nanotube (CD-MONT-2′) as a fluorescence turn-on probe for the detection of H2S in living cells.81 To investigate the fluorescence response of CD-MONT-2 to H2S, they dissolved CD-MONT-2′ in DMSO to prepare 10 μM stock solutions, and then recorded the emission spectra at 350–650 nm under 330 nm excitation. The results showed that CD-MONT-2′ exhibited weak fluorescence in DMSO. When 1 mL H2S was added to the stock solution, the fluorescence intensity was significantly enhanced (Fig. 11A). Furthermore, to explore the fluorescence opening response of CD-MONT-2′ to sulfide, they added different concentrations of Na2S (0–10 μM) into the solution and recorded the fluorescence spectra (Fig. 11B). In order to explore the fluorescence selectivity of CD-MONT-2′, Na2SO4, Na2S2O3, Na2SO3 and glucose, thiol amino acids and non-thiol amino acids were selected as the control group of Na2S. The fluorescence intensity images of the obtained results are shown in Fig. 11C and D. These results indicated that CD-MONT-2′ has a high selectivity and moderate sensitivity fluorescence opening reaction against H2S molecules. The sensing mechanism is based on the coordination between H2S and the metal ion in the center of the probe to adjust the fluorescence intensity. Fig. 11E reveals the mechanism of CD-MONT-2′ opening of fluorescent probes. During the subsequent cellular imaging experiments, they added PBS solution with different concentrations of Na2S into the treated HeLa cells and analyzed the fluorescence imaging results of each group. The results showed that the CD-MONT-2′ probe not only detected the external sulfides added to the cell culture, but also sulfides produced by cells in the body. This also suggested that CD-MONT-2′ has the potential for real-time intracellular H2S imaging with a highly selective and moderately sensitive fluorescence-on response to H2S molecules in the cell growth environment.
Fig. 11 (A) Schematic diagram of fluorescence intensity changing with time within 15 min of adding H2S. (B) The fluorescence spectra of different concentrations of Na2S (0–10 μM) were added into the culture medium. (C and D) Fluorescence intensity images of CD-MONT-2′ in different substance systems. (I − I0)/I0 (where I0 is the initial fluorescence intensity, and I is the fluorescence intensity after the addition of the analyte). (E) Schematic diagram of the mechanism of CD-MONT-2′ opening fluorescence probe.81 Reproduced with permission. Copyright 2016, Springer Nature. |
Das et al. prepared Al-MiL-53-N3 using a solvothermal method and investigated its ability to detect intracellular H2S in a live cell imaging assay.82 They first implanted a probe (25 μM) into macrophages and then treated the cells with a Na2S solution (5 μM), which induced intracellular H2S production. The results showed that cells loaded with probes and treated with Na2S showed bright fluorescence, which suggested that the Al-MIL-53-N3 probe had the ability to recognize H2S in cells. Yuan et al. reported a novel two-mode probe based on a circular dichroic spectrum (CD) and fluorescence signal (CuxOS@ZIF-8).83 CD is an ideal and powerful bioassay technique because it is highly sensitive and does not damage cells during the detection process. Fig. 12 shows the principle of the CuxOS@ZIF-8 nanosensor for endogenous H2S detection. The use of ZIF-8 conferred high levels of selectivity toward H2S. Only H2S was allowed to react with the internal skeleton of CuxOS. To investigate the stability and biocompatibility of the CuxOS@ZIF-8 probe, they tested the probe in an environment with a pH of 5.0–7.4. In the Phosphate Buffered Saline (PBS) buffer (pH = 7.4), the hydrodynamic size of the nano-probe remained unchanged which indicated the good stability of the probe. In a biocompatibility study of CuxOS@ZIF-8, it was observed that there were few adverse effects in living cells for 48 h even at concentrations of CuxOS@ZIF-8 as high as 100 μg mL−1, and CuxOS@ZIF-8 did not cause ROS reactions in HeLa cells. These results showed that the CD and fluorescence signal system created by CuxOS@ZIF-8 has good stability and biocompatibility, and has high selectivity and sensitivity for H2S detection. The probe employed both CD and fluorescence signals to accurately detect H2S not only in vitro, but also in living cells and in vivo. In the detection process, the chiral CuxOS was transformed into the achiral CuxS, thus realizing the ultra-sensitive detection. This strategy opened up new avenues for the development of chiral nanostructures for biocatalysis, bioimaging, and diagnostics in life sciences.
Fig. 12 CuxOS@ZIF-8. Schematic diagram of detecting H2S in cells using a nanosensor.83 Reproduced with permission. Copyright 2020, Wiley. |
To sum up, most of the current studies on the detection of H2S by MOFs are in the stage of in vitro experiments, which are conducted by simulating the cell environment in vitro, and until now in vivo experiments in animals have rarely been executed. Also, most experiments are executed by adding exotic sulfides (Na2S, H2S). Apart from this, in order to activate the fluorescence effect of fluorescent probes, some potential sulfide sources such as GSH and L-cysteine (L-Cys) should be increased to investigate the fluorescence effect of open probes.
Li et al. constructed a nanoscale metal–organic framework (Mi-UiO-66 and Mi-UiO-67) fluorescent probe for detecting Cys and GSH using a solvothermal method.95 They uplifted the fluorescence sensing capability of the materials by introducing maleimide groups into the NMOFs, that resulted in Mi-UiO-66 and Mi-UiO-67 displaying excellent photophysical properties for biological applications. This is because incorporating organic fluorescent switches into periodic and porous NMOFs using this strategy not only effectively prevented the aggregation-induced bursts (ACQ), but also effectively prevented dye leaching. Transmission electron microscopy (TEM) showed that the size of Mi-UiO-66 and Mi-UiO-67 nanoparticles was ≤100 nm with even size distribution, which was suitable for living cell imaging. They also examined the stability of the obtained Mi-UiO-66 and Mi-UiO-67 in cell culture, and the PXRD measurements indicated that they were very stable and suitable for use in biological imaging. To explore the selectivity of Mi-UiO-66 and Mi-UiO-67 for Cys and GSH, they applied Mi-UiO-66 and Mi-UiO-67 in the presence of various interferons (Ala, Val, Leu, Ile, Pro, Phe). The fluorescent response in this environment showed that only Cys and GSH could induce significant fluorescence enhancement, indicating that Mi-UiO-66 and Mi-UiO-67 were fluorescence probes with good selectivity.
Zhu et al. prepared MnO2 NS@Ru(bpy)32+-UiO-66 nanocomposites coated with manganese dioxide nanosheets by an in-situ growth method as a fluorescence sensing platform for GSH in living cells.96 They investigated the selectivity, stability and biocompatibility of MnO2 NS@Ru(bpy)32+-UiO-66 nanocomposites. First, the selectivity of this platform was evaluated by investigating the fluorescence response toward various potentially competing interferences (KCl, MgSO4, FeCl2, Glu, Tyr, BSA, UA, Lys, AA, Cys). The results showed that the fluorescence intensity of glutathione was significantly greater than that of other substances. These results indicated that MnO2 NS@Ru(bpy)32+-UiO-66 nanocomposites have high selectivity for GSH. In addition, the fluorescence detection of 20 μM GSH was performed for eight consecutive times with no perceptible change in the results, indicating that the fluorescence detection system has good stability. Using HeLa cells as an example, this group analyzed the biocompatibility of MnO2 NS@Ru(bpy)32+-UiO-66 by MTT assay. When HeLa cells were exposed to MnO2 NS@Ru(bpy)32+-UiO-66 at a concentration lower than 120 μg mL−1 for 24 h, no significant decrease in cell survival was observed. These results indicate that MnO2 NS@Ru(bpy)32+-UiO-66 has good biocompatibility and has significant application prospects in GSH detection in vivo.
Yang et al. for the first time developed a new sensitive two-photon NMOF fluorescent probe (TPNP-1) based on the host-guest interaction.97 As shown in Fig. 13, TPNP-1 can be used to monitor fluctuations in endogenous GSH levels in living cells. They first synthesized UiO-66-NH2 by solvothermal reaction. Secondly, due to the unique porous structure of UiO-66-NH2, which possess excellent surface negative potential and has excellent adsorption ability on cationic dyes, they opted to introduce DMASM dye to UiO-66-NH2, which provided the two-photon fluorescence system DMASM⊂UiO-66-NH2. Finally the KMnO4 solution of different concentrations (50, 100, 150, 200, 250 μg mL−1) was introduced into the DMASM⊂UiO-66-NH2 in aqueous medium with strong stirring at room temperature that yielded TPNP-1.
Fig. 13 Schematic diagram of TPNP-1 detecting intracellular GSH.97 Reproduced with permission. Copyright 2021, Elsevier. |
In the cell experiment, considering the difference in GSH content between cancer cells and normal cells, HepG2, HeLa and normal hepatocyte L02 cells were selected for the GSH in situ fluorescence imaging experiment (Fig. 14A–I).
Fig. 14 (A) SEM image of TPNP-1 (scale bar = 100 nm). (B) TEM image of TPNP-1 (scale bar = 100 nm). (C) DLS data of TPNP-1. (D) DLS data of DMASM⊂UiO-66-NH2. (E) XPS plot of TPNP-1. (F) Zeta potential diagram for UiO-66-NH2, DMASM⊂UiO-66-NH2 and TPNP-1. (G–I) SEM-mapping image of TPNP-1.97 Reproduced with permission. Copyright 2021, Elsevier. |
After incubating different cell lines and probe TPNP-1 for 4 hours in DMEM medium of 37 °C, they excited the two photon confocal images at 880 nm using a nanosecond laser (Fig. 15A and B). Thereafter, TPNP-1 was applied to tissue imaging of mouse liver sections. The liver sections were first incubated with PBS solution containing TPNP-1 for 30 min, and then the fluorescence intensity changes at different scanning depths were recorded using a two-photon microscope under Z-scan mode. Imaging showed (Fig. 15C) that two-photon fluorescence imaging of rat liver sections showed a penetration depth of 170 nm with a detection limit of 87 nM. The results showed that the two-photon imaging based on the probe can be realized not only in living cells, but also in deep living tissues. The construction of the TPNP-1 two-photon fluorescence probe effectively solved the problem of poor penetration of a single photon fluorescence probe into biological tissue.
Fig. 15 (A) Fluorescence images of HeLa cells: (a) 50 μg mL−1 TPNP-1 after 500 μM NEM incubated; (b) 50 μg mL−1 TPNP-1; (c) 50 μg mL−1 TPNP-1 after 200 μM LPA incubated; (B) relative fluorescence intensities of a, b and c; (C) two photon fluorescence images of fresh mice liver tissue slice.97 Reproduced with permission. Copyright 2021, Elsevier. |
Traditional miRNA assays are unable to monitor miRNA levels in living cells in real time. Wu et al. constructed a novel fluorescent biosensor (PANMOF) based on a fluorophore-labeled peptide nucleic acid (PNA) probe combined with an NMOF (UiO-66) vector for monitoring multiplexed miRNAs in live cancer cells (Fig. 16).102 This miRNA sensor not only enabled quantitative and highly specific detection of multiple miRNAs in living cancer cells, but also allowed precise and in situ monitoring of spatial and temporal changes in miRNA expression. When the PNA probe was firmly bound to the nanoporous NMOF carrier, the fluorescence of dye-labelled PNAs was dramatically burst.103 However, in the presence of targeted miRNAs, the dye-labelled PNAs were released from the NMOF and hybridized with the target miRNAs, resulting in a recovery of fluorescence of the PNA probe. They first validated the effectiveness of the proposed miRNA sensing scheme using the PANMOF platform in homogeneous solution. Preliminary experiments showed that PANMOF can be used as a bio-sensing platform for miRNAs. Thereafter, they applied the PANMOF system to two human breast cancer cells, MCF-7 and MDA-MB-231, for miRNA detection studies. The cultured cells were first incubated with the FAM-PNA21-NMOF complex (a PANMOF complex) for 14 hours.
Fig. 16 Schematic diagram of the PANMOF sensing mechanism.102 Reproduced with permission. Copyright 2015, RSC. |
Earlier studies have shown that NMOF nanoparticles can be internalized into biological cells through phagocytosis that resulted in bright fluorescence of the FAM-PNA21-NMOF complex (Fig. 17) showing the fluorescence intensity exhibited by different cell lines after incubation. In addition, they explored the potential cytotoxicity of PANMOF by MTT assay. The results showed that two cancer cells retained more than 90% of their activity after treatment with PANMOF at concentrations of up to 80 μg mL−1, which indicated its excellent biocompatibility. In summary, the PANMOF bio-sensing platform possesses excellent sensitivity, specificity and biocompatibility, providing an important method for monitoring the dynamic changes of miRNA expression in living cancer cells.
Fig. 17 Fluorescence images obtained after 14 h incubation with FAM-PNA21-NMOF and FAM-scPNA-NMOF.102 Reproduced with permission. Copyright 2015, RSC. |
Hu et al. reported a bimetallic organic backbone (CoNi-MOF) using a solvothermal method,104 as an efficient sensing platform for miRNA-126 detection. Compared to the homo-structured monometallic Co-MOF or Ni-MOF, the bimetallic CoNi-MOF exhibited superior electrochemical activity due to the synergistic interaction between multiple metal centres and electrochemically active ligands. They tested CoNi-MOF for selectivity as well as stability and in the presence of multiple interferers (MM1, MM2, miRNA-141, miRNA-155 and miRNA-21) and it displayed high selectivity for miRNA-126, which could be attributed to the efficient and specific hybridization. Also, the measurement using the miRNA-126/cDNA/CoNi-MOF(1:1)/AE based electrode was executed continuously for 15 days and the results showed that the electrochemical impedance spectroscopy (ESI) response did not change significantly throughout the experiment, thereby demonstrating the good stability of miRNA-126/cDNA/CoNi-MOF. Notably, they also tested the miRNA-126/cDNA/CoNi-MOF for reusability, where they probed the reusability of the biosensor CoNi-MOF by measuring miRNA-126 (10 pm) detection at five separate electrodes. The data showed a low RSD of 1.01% for the EIS response, and after refreshing again, the EIS returned to the original level, which demonstrated the reusable nature of the biosensor CoNi-MOF.
Yang et al. reported a novel two-photon nanoprobe TP-CHA-UiO-66,105 using MOF as a nanocarrier and hairpins as a two-photon fluorescent signal amplifier for miRNA imaging of tumour cells and deep tissues. Where TP was a fluorophore, and its excellent imaging performance could facilitate and boost imaging of tumour-associated miRNAs in live tumour cells and tissues. Catalytic hairpin assembly (CHA),106 was an ultra-sensitive and highly efficient selective RNA amplification detection strategy that identified the target and amplifies the signal. Fig. 18A illustrates the imaging process of TP-CHA-UiO-66 in live cancer cells. Upon penetration into the cell, intracellular phosphate coordinated with the Zr atoms of the MOF, thereby leading to the release of hairpins on the surface of TP-CHA-MOFs. The intracellular miRNA triggered the formation of H1-H2 duplex structures, leading to the switching mode of the TP fluorescent signal and enabling the amplification and detection of the target miRNA. After the preparation and characterization of TP-CHA-MOFs, investigators performed in vitro fluorescence imaging experiments as well as intracellular fluorescence imaging experiments on TP-CHA-MOFs. In an in vitro fluorometric assay, they dispersed TP-CHA-MOF nanoprobes (10 μL, 1 μM DNA) in a phosphate-buffered solution (PBS, 10 mM, pH = 7.4) similar to the cellular environment for 6 h at 37 °C, then added miRNA-21 (0–120 nM) at different concentration gradients to this mixture and incubated for 1.5 h at 37 °C. Fluorescence spectra were recorded at 400 nm excitation wavelength and the same experiments were then performed under the same conditions in HEPES and Tris buffers. As shown in Fig. 18B, only weak fluorescent emission was observed in HEPES and Tris buffers containing miRNA-21, whereas intense fluorescent emission resulted in PBS buffer due to phosphate triggering the release of H1 and H2 from MOFs. These results demonstrated the good selectivity of the TP-CHA-MOFs fluorescent probe for the PBS buffer solution, which indirectly indicated that the TP-CHA-MOFs fluorescent probe can be applied within the cellular environment due to the presence of phosphate in the PBS buffer similar to the intracellular environment. Subsequently, they examined the in vitro fluorescence sensing performance of TP-CHA-MOFs nano-probes by recording the fluorescence spectra at different concentrations of TP-CHA-MOFs nanoprobes (Fig. 18C). The fluorescence intensity gradually increased as the miRNA-21 concentration increased from 0 to 120 nM. In intracellular imaging experiments, they used the CCK-8 method to investigate the cytotoxicity of TP-CHA-MOFs nanoprobes on living cells. HEK293, HeLa and MCF-7 cells were incubated with different concentrations of TP-CHA-MOFs. At the end of the incubation, the cellular activity was still over 88% which demonstrates the good biocompatibility of the TP-CHA-MOFs nanoprobes. Compared to conventional single-photon fluorescent probes, the two-photon fluorescent probe TP-CHA-UiO-66 offered better penetration and enabled fluorescence imaging in deeper biological tissues. The TP-CHA-UiO-66 nanoprobe enabled efficient TP fluorescence imaging of deep miRNA-21 in tumour tissues at penetration depths of 20–160 μm.
Fig. 18 (A) Schematic diagram of the imaging process of TP-CHA-UiO-66 in living cells. (B) F/F0 for TP-CHA-MOFs incubated with miRNA in DPBS, HEPES, or Tris–HCl buffer. (C) Fluorescence spectra of various concentrations of miRNA (0–120 nM).105 Reproduced with permission. Copyright 2022, Elsevier. |
Compared with previously reported fluorescent probes for miRNA detection, the two-photon nanoprobe TP-CHA-UiO-66 reported by Yang et al. exhibited better selectivity, biocompatibility and penetration, which significantly improved the efficiency of miRNA detection and has promising applications in medical diagnostics.
In summary, investigation on the construction of miRNA biosensing platforms for detection is still at a preliminary stage. Most of the studies have been conducted only with in vitro fluorescence experiments and cellular experiments, while in vivo experiments on animals are relatively rare. The limits of detection of miRNAs with the fluorescent probes constructed so far are relatively low, and the stability of the probes needs to be improved.
Footnote |
† These authors contributed equally to this work. |
This journal is © The Royal Society of Chemistry 2023 |