Issue 30, 2016

Ultrafast excited-state dynamics of isocytosine

Abstract

The alternative nucleobase isocytosine has long been considered as a plausible component of hypothetical primordial informational polymers. To examine this hypothesis we investigated the excited-state dynamics of the two most abundant forms of isocytosine in the gas phase (keto and enol). Our surface-hopping nonadiabatic molecular dynamics simulations employing the algebraic diagrammatic construction to the second order [ADC(2)] method for the electronic structure calculations suggest that both tautomers undergo efficient radiationless deactivation to the electronic ground state with time constants which amount to τketo = 182 fs and τenol = 533 fs. The dominant photorelaxation pathways correspond to ring-puckering (ππ* surface) and C[double bond, length as m-dash]O stretching/N–H tilting (nπ* surface) for the enol and keto forms respectively. Based on these findings, we infer that isocytosine is a relatively photostable compound in the gas phase and in these terms resembles biologically relevant nucleobases. The estimated S1 [radiolysis arrow - arrow with voltage kink] T1 intersystem crossing rate constant of 8.02 × 1010 s−1 suggests that triplet states might also play an important role in the overall excited-state dynamics of the keto tautomer. The reliability of ADC(2)-based surface-hopping molecular dynamics simulations was tested against multireference quantum-chemical calculations and the potential limitations of the employed ADC(2) approach are briefly discussed.

Graphical abstract: Ultrafast excited-state dynamics of isocytosine

Supplementary files

Article information

Article type
Paper
Submitted
29 Febr. 2016
Accepted
09 Jūn. 2016
First published
10 Jūn. 2016

Phys. Chem. Chem. Phys., 2016,18, 20208-20218

Author version available

Ultrafast excited-state dynamics of isocytosine

R. Szabla, R. W. Góra and J. Šponer, Phys. Chem. Chem. Phys., 2016, 18, 20208 DOI: 10.1039/C6CP01391K

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